Miyakogusa Predicted Gene

Lj4g3v1719710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1719710.1 gene.g55471.t1.1
         (167 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109520.1 | hypothetical protein | HC | chr4:45512266-4551...   184   3e-47

>Medtr4g109520.1 | hypothetical protein | HC |
           chr4:45512266-45513571 | 20130731
          Length = 230

 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/168 (61%), Positives = 116/168 (69%), Gaps = 5/168 (2%)

Query: 1   MKLSQSPISQANPIMQLXXXXXXXXXXXXXXXXLTSISTSLQFPRAVTTANQATITNDAE 60
           MKLSQ+   Q NP +Q                  T     LQ  R      +A I     
Sbjct: 1   MKLSQNLNLQTNPPIQTRIHRLPLSPNITTSHLFTP---PLQKNRFKCITLKA-INESIS 56

Query: 61  LPTMSEILSASKSQNLHLQLQTLGPFFRITARSSVTEAELGKAEGIVRFWVG-GKILHLD 119
           LPTMSEIL +S +Q L+LQLQTLGPFFRITARS VT+ ELGKAEG+VR W G G ILHLD
Sbjct: 57  LPTMSEILESSSAQKLNLQLQTLGPFFRITARSLVTDNELGKAEGLVRMWFGRGNILHLD 116

Query: 120 SIKLRRETLNMEKSIFGLGLYIGAVAIRHGYDCGCKTAQLLAINESDL 167
           SIKL+RETL MEKSIFG+GLYIGAVAIRHG+DCGCK+AQLLAIN+SDL
Sbjct: 117 SIKLQRETLGMEKSIFGIGLYIGAVAIRHGFDCGCKSAQLLAINDSDL 164