Miyakogusa Predicted Gene
- Lj4g3v1719690.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1719690.1 CUFF.49702.1
(645 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g109500.1 | histone deacetylase superfamily protein | HC |... 1021 0.0
Medtr4g109500.2 | histone deacetylase superfamily protein | HC |... 1003 0.0
Medtr4g111985.1 | histone deacetylase superfamily protein | HC |... 271 2e-72
Medtr4g111985.2 | histone deacetylase superfamily protein | HC |... 270 4e-72
Medtr4g111985.5 | histone deacetylase superfamily protein | HC |... 270 4e-72
Medtr4g111985.3 | histone deacetylase superfamily protein | HC |... 241 2e-63
Medtr4g111985.4 | histone deacetylase superfamily protein | HC |... 241 2e-63
Medtr8g093800.1 | histone deacetylase superfamily protein | HC |... 181 2e-45
Medtr2g087270.1 | histone deacetylase superfamily protein | HC |... 181 3e-45
Medtr3g077160.1 | histone deacetylase family protein | HC | chr3... 106 6e-23
Medtr3g118535.1 | histone deacetylase family protein | HC | chr3... 102 1e-21
Medtr5g004640.2 | histone deacetylase family protein | HC | chr5... 100 4e-21
Medtr5g004640.1 | histone deacetylase family protein | HC | chr5... 100 4e-21
Medtr4g055080.1 | histone deacetylase family protein | HC | chr4... 98 3e-20
Medtr4g055080.2 | histone deacetylase family protein | HC | chr4... 93 7e-19
Medtr1g016440.1 | histone deacetylase superfamily protein | HC |... 77 5e-14
>Medtr4g109500.1 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 655
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/641 (75%), Positives = 542/641 (84%), Gaps = 1/641 (0%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
QRRVGLLYDERMCKH+ PDD HPETP+RIR IW+KLQ+TGITDRC++L+AK+A+D+ LL
Sbjct: 16 QRRVGLLYDERMCKHYDPDDDRHPETPNRIRAIWDKLQTTGITDRCLLLDAKEADDKHLL 75
Query: 65 SVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASR 124
+VHTK HV+LI IS K Y+SR A KL+S+YFNEGS+++AYLAAGSAIE VKRVAS+
Sbjct: 76 AVHTKNHVNLIKNISYKSYNSRS-NAAAKLNSIYFNEGSTKSAYLAAGSAIEAVKRVASK 134
Query: 125 ELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGN 184
EL SAVA+VRPPGHH E ++A GFCLFNNVAVAASYLL+ P+LGVKKILIVDWD+HHGN
Sbjct: 135 ELQSAVAIVRPPGHHCEQHKAMGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGN 194
Query: 185 GTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDAD 244
GTQK+F +DSRVLFFSVHRHEFG FYP DDGFY M G+G GAGYNINVPWENGRCGD D
Sbjct: 195 GTQKVFWNDSRVLFFSVHRHEFGRFYPCGDDGFYNMTGEGDGAGYNINVPWENGRCGDTD 254
Query: 245 YIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRV 304
Y A WDHILLPVAKEF+PDIIIVSAGFDAAVGDPLGGC +TPFGYS+LLKKL++ AEGR+
Sbjct: 255 YFAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAEGRI 314
Query: 305 VLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
VLVLEGGYNLDSIAKSMHAC+EVLLEDKPL+GSSEA+PFESTWRVIQAVR+ELSPFWPTL
Sbjct: 315 VLVLEGGYNLDSIAKSMHACVEVLLEDKPLMGSSEAFPFESTWRVIQAVREELSPFWPTL 374
Query: 365 ACELPQKLISQIAPPPXXXXXXXXXXXXXXKGQINSEKLAELLEDVIKPLSKLNVDADEE 424
ACELPQ +I +APPP K E +AELLEDVIKPLS L VDADE+
Sbjct: 375 ACELPQNIICPVAPPPHTLLSSSDSETEDDKAPPKLENVAELLEDVIKPLSNLKVDADED 434
Query: 425 TDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVNKTLPKEILW 484
DAS SWRS+LSNV +WYASYGSNMW+ R CYIAGGQVEGMQK C GS+NKTLP EI W
Sbjct: 435 PDASCSWRSKLSNVYVWYASYGSNMWRPRFDCYIAGGQVEGMQKLCSGSMNKTLPDEIFW 494
Query: 485 KTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDILFHENGLSLN 544
KTFPCHIF+GR+ S SWGPGGVAFLNPE+N QH TY+C+YKISLEQFND+LF ENGLSL+
Sbjct: 495 KTFPCHIFYGRESSHSWGPGGVAFLNPEKNSQHKTYMCMYKISLEQFNDVLFLENGLSLD 554
Query: 545 AGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSLHDIERFKSG 604
S LFD TLN IS KEF SQE++K GWYGN VYLGKEQDIPIITMTC L DIE FKSG
Sbjct: 555 VDSALFDMATLNAISNKEFGSQEVLKNGWYGNAVYLGKEQDIPIITMTCPLLDIELFKSG 614
Query: 605 KLPLRAPNKAYANTLIKGLVEGEQLSEDXXXXXXXXXXKSL 645
+LPL APNK+YANTLI+GLVEGEQLSE KSL
Sbjct: 615 ELPLCAPNKSYANTLIRGLVEGEQLSEAEAIAYIDAAAKSL 655
>Medtr4g109500.2 | histone deacetylase superfamily protein | HC |
chr4:45499722-45507261 | 20130731
Length = 650
Score = 1003 bits (2594), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/641 (74%), Positives = 537/641 (83%), Gaps = 6/641 (0%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
QRRVGLLYDERMCKH+ PDD HPETP+RIR IW+KLQ+TGITDRC++L+AK+A+D+ LL
Sbjct: 16 QRRVGLLYDERMCKHYDPDDDRHPETPNRIRAIWDKLQTTGITDRCLLLDAKEADDKHLL 75
Query: 65 SVHTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASR 124
+VHTK HV+LI IS K Y+SR A KL+S+YFNEGS+++AYLAAGSAIE VKRVAS+
Sbjct: 76 AVHTKNHVNLIKNISYKSYNSRS-NAAAKLNSIYFNEGSTKSAYLAAGSAIEAVKRVASK 134
Query: 125 ELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGN 184
EL SAVA+VRPPGHH E ++A GFCLFNNVAVAASYLL+ P+LGVKKILIVDWD+HHGN
Sbjct: 135 ELQSAVAIVRPPGHHCEQHKAMGFCLFNNVAVAASYLLNDSPELGVKKILIVDWDVHHGN 194
Query: 185 GTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDAD 244
GTQK+F +DSRVLFFSVHRHEFG FYP DDGFY M G+G GAGYNINVPWENGRCGD D
Sbjct: 195 GTQKVFWNDSRVLFFSVHRHEFGRFYPCGDDGFYNMTGEGDGAGYNINVPWENGRCGDTD 254
Query: 245 YIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRV 304
Y A WDHILLPVAKEF+PDIIIVSAGFDAAVGDPLGGC +TPFGYS+LLKKL++ AEGR+
Sbjct: 255 YFAAWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCCITPFGYSLLLKKLMNFAEGRI 314
Query: 305 VLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
VLVLEGGYNLDSIAKSMHAC+EVLLEDKPL+GSSEA+PFESTWRVIQAVR+ELSPFWPTL
Sbjct: 315 VLVLEGGYNLDSIAKSMHACVEVLLEDKPLMGSSEAFPFESTWRVIQAVREELSPFWPTL 374
Query: 365 ACELPQKLISQIAPPPXXXXXXXXXXXXXXKGQINSEKLAELLEDVIKPLSKLNVDADEE 424
ACELPQ +I +APPP K E +AELLEDVIKPLS L VDADE+
Sbjct: 375 ACELPQNIICPVAPPPHTLLSSSDSETEDDKAPPKLENVAELLEDVIKPLSNLKVDADED 434
Query: 425 TDASSSWRSELSNVCIWYASYGSNMWKSRLSCYIAGGQVEGMQKHCPGSVNKTLPKEILW 484
DAS SWRS+LSNV +WYASYGSNMW+ R CYIAGG QK C GS+NKTLP EI W
Sbjct: 435 PDASCSWRSKLSNVYVWYASYGSNMWRPRFDCYIAGG-----QKLCSGSMNKTLPDEIFW 489
Query: 485 KTFPCHIFFGRDFSRSWGPGGVAFLNPERNMQHSTYLCLYKISLEQFNDILFHENGLSLN 544
KTFPCHIF+GR+ S SWGPGGVAFLNPE+N QH TY+C+YKISLEQFND+LF ENGLSL+
Sbjct: 490 KTFPCHIFYGRESSHSWGPGGVAFLNPEKNSQHKTYMCMYKISLEQFNDVLFLENGLSLD 549
Query: 545 AGSPLFDTTTLNTISVKEFDSQEIVKGGWYGNVVYLGKEQDIPIITMTCSLHDIERFKSG 604
S LFD TLN IS KEF SQE++K GWYGN VYLGKEQDIPIITMTC L DIE FKSG
Sbjct: 550 VDSALFDMATLNAISNKEFGSQEVLKNGWYGNAVYLGKEQDIPIITMTCPLLDIELFKSG 609
Query: 605 KLPLRAPNKAYANTLIKGLVEGEQLSEDXXXXXXXXXXKSL 645
+LPL APNK+YANTLI+GLVEGEQLSE KSL
Sbjct: 610 ELPLCAPNKSYANTLIRGLVEGEQLSEAEAIAYIDAAAKSL 650
>Medtr4g111985.1 | histone deacetylase superfamily protein | HC |
chr4:46339481-46328880 | 20130731
Length = 640
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 12 YDERMCKHHVPD--DGYHPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
+DERM H + HPE PDR+R I L GI RC + A++ E+L+ VH+
Sbjct: 240 FDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHS 299
Query: 69 KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
+H++ + +++SKL S + Y NE S+ AA LAAG ++ V S +
Sbjct: 300 SEHIESV-EVTSKLMSS------YFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKN 352
Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
A+VRPPGHHA + GFCL NN AVAA +K+LI+DWD+HHGNGTQ+
Sbjct: 353 GFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQE 408
Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
IF + VL+ S+HRHE G+FYP + G +G GY +N+PW G GD DYI
Sbjct: 409 IFEQNKSVLYISLHRHEDGTFYPGT--GGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFA 466
Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
+ +++LP+A EF+PD I+SAGFDAA GDPLGGC +TP GY+ + L L+ G+++++L
Sbjct: 467 FQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVIL 526
Query: 309 EGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
EGGYNL SI+ S + ++VLL + P+ ++P +S + + V + FWP+L
Sbjct: 527 EGGYNLRSISSSATSVIKVLLGESPVCELENSFPTKSGLQTVFEVLDIQNNFWPSL 582
>Medtr4g111985.2 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328537 | 20130731
Length = 599
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 12 YDERMCKHHVPD--DGYHPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
+DERM H + HPE PDR+R I L GI RC + A++ E+L+ VH+
Sbjct: 201 FDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHS 260
Query: 69 KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
+H++ + +++SKL S + Y NE S+ AA LAAG ++ V S +
Sbjct: 261 SEHIESV-EVTSKLMSS------YFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKN 313
Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
A+VRPPGHHA + GFCL NN AVAA +K+LI+DWD+HHGNGTQ+
Sbjct: 314 GFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQE 369
Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
IF + VL+ S+HRHE G+FYP + G +G GY +N+PW G GD DYI
Sbjct: 370 IFEQNKSVLYISLHRHEDGTFYPGT--GGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFA 427
Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
+ +++LP+A EF+PD I+SAGFDAA GDPLGGC +TP GY+ + L L+ G+++++L
Sbjct: 428 FQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVIL 487
Query: 309 EGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
EGGYNL SI+ S + ++VLL + P+ ++P +S + + V + FWP+L
Sbjct: 488 EGGYNLRSISSSATSVIKVLLGESPVCELENSFPTKSGLQTVFEVLDIQNNFWPSL 543
>Medtr4g111985.5 | histone deacetylase superfamily protein | HC |
chr4:46338860-46328537 | 20130731
Length = 599
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 12 YDERMCKHHVPD--DGYHPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
+DERM H + HPE PDR+R I L GI RC + A++ E+L+ VH+
Sbjct: 201 FDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHS 260
Query: 69 KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
+H++ + +++SKL S + Y NE S+ AA LAAG ++ V S +
Sbjct: 261 SEHIESV-EVTSKLMSS------YFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKN 313
Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
A+VRPPGHHA + GFCL NN AVAA +K+LI+DWD+HHGNGTQ+
Sbjct: 314 GFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQE 369
Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
IF + VL+ S+HRHE G+FYP + G +G GY +N+PW G GD DYI
Sbjct: 370 IFEQNKSVLYISLHRHEDGTFYPGT--GGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFA 427
Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
+ +++LP+A EF+PD I+SAGFDAA GDPLGGC +TP GY+ + L L+ G+++++L
Sbjct: 428 FQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVIL 487
Query: 309 EGGYNLDSIAKSMHACLEVLLEDKPLIGSSEAYPFESTWRVIQAVRQELSPFWPTL 364
EGGYNL SI+ S + ++VLL + P+ ++P +S + + V + FWP+L
Sbjct: 488 EGGYNLRSISSSATSVIKVLLGESPVCELENSFPTKSGLQTVFEVLDIQNNFWPSL 543
>Medtr4g111985.3 | histone deacetylase superfamily protein | HC |
chr4:46338755-46328564 | 20130731
Length = 512
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 184/304 (60%), Gaps = 16/304 (5%)
Query: 12 YDERMCKHHVPD--DGYHPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
+DERM H + HPE PDR+R I L GI RC + A++ E+L+ VH+
Sbjct: 201 FDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHS 260
Query: 69 KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
+H++ + +++SKL S + Y NE S+ AA LAAG ++ V S +
Sbjct: 261 SEHIESV-EVTSKLMSS------YFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKN 313
Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
A+VRPPGHHA + GFCL NN AVAA +K+LI+DWD+HHGNGTQ+
Sbjct: 314 GFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQE 369
Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
IF + VL+ S+HRHE G+FYP + G +G GY +N+PW G GD DYI
Sbjct: 370 IFEQNKSVLYISLHRHEDGTFYPGT--GGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFA 427
Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
+ +++LP+A EF+PD I+SAGFDAA GDPLGGC +TP GY+ + L L+ G+++++L
Sbjct: 428 FQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVIL 487
Query: 309 EGGY 312
EGG+
Sbjct: 488 EGGF 491
>Medtr4g111985.4 | histone deacetylase superfamily protein | HC |
chr4:46338588-46328564 | 20130731
Length = 512
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 184/304 (60%), Gaps = 16/304 (5%)
Query: 12 YDERMCKHHVPD--DGYHPETPDRIRVIWNKLQSTGI-TDRCVILEAKKAEDEQLLSVHT 68
+DERM H + HPE PDR+R I L GI RC + A++ E+L+ VH+
Sbjct: 201 FDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHS 260
Query: 69 KKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHS 128
+H++ + +++SKL S + Y NE S+ AA LAAG ++ V S +
Sbjct: 261 SEHIESV-EVTSKLMSS------YFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKN 313
Query: 129 AVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQK 188
A+VRPPGHHA + GFCL NN AVAA +K+LI+DWD+HHGNGTQ+
Sbjct: 314 GFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAG----ARKVLILDWDVHHGNGTQE 369
Query: 189 IFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAV 248
IF + VL+ S+HRHE G+FYP + G +G GY +N+PW G GD DYI
Sbjct: 370 IFEQNKSVLYISLHRHEDGTFYPGT--GGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFA 427
Query: 249 WDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVL 308
+ +++LP+A EF+PD I+SAGFDAA GDPLGGC +TP GY+ + L L+ G+++++L
Sbjct: 428 FQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVIL 487
Query: 309 EGGY 312
EGG+
Sbjct: 488 EGGF 491
>Medtr8g093800.1 | histone deacetylase superfamily protein | HC |
chr8:39251957-39246652 | 20130731
Length = 420
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 185/347 (53%), Gaps = 28/347 (8%)
Query: 27 HPETPDRIRVIWNKLQSTGITDR---CVILEAKK---AEDEQLLSVHTKKHVDLINKISS 80
HPE+ R+ I LQ +T + ++E + A + + SVH + +V + K+
Sbjct: 77 HPESHFRVPAIVTALQQMKLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKVMD 136
Query: 81 KLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVAS-----RELHSAVAVVRP 135
+ + + L + Y + + + +AAG+ + +V V + ++ + A++RP
Sbjct: 137 QALE-KGLIVVDGSGPTYATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIRP 195
Query: 136 PGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSR 195
PGHHA P GFC+F NVA+AA + QR G+K++ I+D+D+HHGNGT F DD
Sbjct: 196 PGHHAIPKGPMGFCIFGNVAIAARHA--QRVH-GLKRVFIIDFDVHHGNGTNDAFYDDPD 252
Query: 196 VLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLP 255
V F S H+ GS YP + G + +G G G G +N+P G GD +V+D +++P
Sbjct: 253 VFFLSFHQD--GS-YPGT--GKFDEVGAGDGEGTTLNLPLPGG-SGDTAIRSVFDEVVVP 306
Query: 256 VAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAE----GRVVLVLEGG 311
A+ F PDII+VSAG+D V DPL ++T Y +L + LA+ GR V LEGG
Sbjct: 307 CAQRFKPDIILVSAGYDGHVLDPLANLQLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGG 366
Query: 312 YNLDSIAKSMHACLEVLLEDKPLIGSSEAYPF---ESTWRVIQAVRQ 355
YNL S++ S+ LL DK L + E T ++ QA+++
Sbjct: 367 YNLKSLSYSVADTFRALLGDKSLASEFDNPNILYEEPTKKIKQAIQR 413
>Medtr2g087270.1 | histone deacetylase superfamily protein | HC |
chr2:36680260-36677137 | 20130731
Length = 386
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 193/349 (55%), Gaps = 25/349 (7%)
Query: 27 HPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLLSVHTKKHVDLINKISSKLYDSR 86
HPE DR++ + + L+ I+ + A +LLS HT ++++ + K K R
Sbjct: 50 HPENSDRVKNMVSILKRGPISPYVSWHLGRHALIPELLSFHTPEYINELVKADKK---GR 106
Query: 87 RLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHSAVAVVRPPGHHAEPNEAK 146
++ A + N GS +AA LAAG+ + +K + A A+VRPPGHHA+P++A
Sbjct: 107 KVLCA----GTFLNPGSWDAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQAD 162
Query: 147 GFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSRVLFFSVHRHEF 206
G+C NN +A LD G KK+ ++D D+H+GNGT + F ++VL S+H +
Sbjct: 163 GYCFLNNAGLAVQLALDS----GCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNH- 217
Query: 207 GSFYPSS-DDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLPVAKEFSPDII 265
GS+ PS G +G G G GYN+N+P NG GD Y+ ++ +++P +F PD+I
Sbjct: 218 GSWGPSHPQSGSIDELGDGEGYGYNLNIPLPNG-TGDNGYVYAFNELVVPSIHKFEPDMI 276
Query: 266 IVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLA----EGRVVLVLEGGYNLDSIAKSM 321
++ G D++ DP G +T GY + + + LA +GR+++V EGGY++ A +
Sbjct: 277 VLVVGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCL 336
Query: 322 HACLEVLLE-DKPLIGSSEA-YPFESTW--RVIQAVRQELS---PFWPT 363
HA LE +L PL+ A YP + T+ +VI+AV+ ++ P W T
Sbjct: 337 HATLEGVLNLPLPLLQDPVAYYPEDKTFSVKVIEAVQNYVTDKMPLWKT 385
>Medtr3g077160.1 | histone deacetylase family protein | HC |
chr3:34636818-34643051 | 20130731
Length = 476
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 151/322 (46%), Gaps = 22/322 (6%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
+RRV Y+ + ++ HP P RIR+ N + + R I A E +
Sbjct: 25 KRRVTYFYEPSIGDYYYGQG--HPMKPHRIRMAHNLIIHYSLHRRMQINRPFAAAPEDIR 82
Query: 65 SVHTKKHVDLINKISSKLYDS------RRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVV 118
H+ +V+ ++ +S ++ R+LK + + +G +AG +I
Sbjct: 83 RFHSDDYVEFLSSVSPEIVSDNSHSHYRQLKRFNVGEDCPVFDGLFPFCQASAGGSIGAA 142
Query: 119 KRVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVD 177
R+ + + +A+ G HHA+ EA GFC N++ + LL +++L VD
Sbjct: 143 VRLNRGD--ADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVH-----RRVLYVD 195
Query: 178 WDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWEN 237
D+HHG+G ++ F RV+ S H+ FG F+P + G G G G Y +NVP +
Sbjct: 196 IDVHHGDGVEEAFYTTDRVMTVSFHK--FGDFFPGT--GHIKDTGVGPGKDYALNVPLND 251
Query: 238 GRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLL 297
G D ++ A++ I+ V + PD +++ G D+ GD LG ++ G++ L+ L
Sbjct: 252 G-MDDENFRALFRPIMQKVMDVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR 310
Query: 298 HLAEGRVVLVLEGGYNLDSIAK 319
+VL GGY + ++A+
Sbjct: 311 SFNVPLMVLG-GGGYTVRNVAR 331
>Medtr3g118535.1 | histone deacetylase family protein | HC |
chr3:55483175-55497394 | 20130731
Length = 498
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 136/298 (45%), Gaps = 23/298 (7%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
+R+V YD + ++ HP P RIR+ L G+ + + A D L
Sbjct: 17 KRKVCYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVHKPFPARDRDLC 74
Query: 65 SVHTKKHVDLINKISSK-----LYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVK 119
H +V + I+ + + +R + D F+ S A GS VK
Sbjct: 75 RFHADDYVSFLRSITPETQQDHMRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGAVK 132
Query: 120 RVASRELHSAVAVVRPPG-HHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDW 178
+ +AV G HHA+ EA GFC N++ +A LL Q +++L VD
Sbjct: 133 LNHDQ---CDIAVNWAGGLHHAKKCEASGFCYVNDIVLAILELLKQH-----ERVLYVDI 184
Query: 179 DIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENG 238
DIHHG+G ++ F RV+ S H+ FG ++P + D IG G G Y++NVP ++G
Sbjct: 185 DIHHGDGVEEAFYTTDRVMTVSFHK--FGDYFPGTGD--LRDIGYGKGKYYSLNVPLDDG 240
Query: 239 RCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKL 296
D Y ++ ++ V + F P +++ G D+ GD LG ++ G++ ++ +
Sbjct: 241 -IDDESYHLLFKPLICKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRYM 297
>Medtr5g004640.2 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
+R++ YD + ++ HP P RIR+ L G+ +++ A+D L
Sbjct: 20 KRKISYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVVKPTAAKDRDLC 77
Query: 65 SVHTKKHVDLINKIS-----SKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGS---AIE 116
H +V + I+ ++ +R + D F+ S A GS A++
Sbjct: 78 KFHADDYVAFLRGITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGALK 135
Query: 117 VVKRVASRELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIV 176
+ + ++ + + HHA+ EA GFC N++ +A LL +++L V
Sbjct: 136 LNHGICDIAINWSGGL-----HHAKKCEASGFCYVNDIVLAILELLKIH-----ERVLYV 185
Query: 177 DWDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWE 236
D DIHHG+G ++ F RV+ S H+ FG ++P + D IG G G Y++NVP +
Sbjct: 186 DIDIHHGDGVEEAFYTTDRVMTVSFHK--FGDYFPGTGD--VRDIGYGKGKYYSLNVPLD 241
Query: 237 NGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKL 296
+G D Y +++ ++ V + F P +++ G D+ GD LG ++ G++ +K +
Sbjct: 242 DG-IDDESYHSLFKPLMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYM 300
>Medtr5g004640.1 | histone deacetylase family protein | HC |
chr5:52671-45920 | 20130731
Length = 495
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 5 QRRVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLL 64
+R++ YD + ++ HP P RIR+ L G+ +++ A+D L
Sbjct: 20 KRKISYFYDPEVGNYYYGQG--HPMKPHRIRMTHALLAHYGLLQHMQVVKPTAAKDRDLC 77
Query: 65 SVHTKKHVDLINKIS-----SKLYDSRRLKIAHKLDSVYFNEGSSEAAYLAAGS---AIE 116
H +V + I+ ++ +R + D F+ S A GS A++
Sbjct: 78 KFHADDYVAFLRGITPETQQDQIRQLKRFNVGE--DCPVFDGLYSFCQTYAGGSVGGALK 135
Query: 117 VVKRVASRELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIV 176
+ + ++ + + HHA+ EA GFC N++ +A LL +++L V
Sbjct: 136 LNHGICDIAINWSGGL-----HHAKKCEASGFCYVNDIVLAILELLKIH-----ERVLYV 185
Query: 177 DWDIHHGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWE 236
D DIHHG+G ++ F RV+ S H+ FG ++P + D IG G G Y++NVP +
Sbjct: 186 DIDIHHGDGVEEAFYTTDRVMTVSFHK--FGDYFPGTGD--VRDIGYGKGKYYSLNVPLD 241
Query: 237 NGRCGDADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKL 296
+G D Y +++ ++ V + F P +++ G D+ GD LG ++ G++ +K +
Sbjct: 242 DG-IDDESYHSLFKPLMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKYM 300
>Medtr4g055080.1 | histone deacetylase family protein | HC |
chr4:20032485-20022768 | 20130731
Length = 430
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 23/311 (7%)
Query: 27 HPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLLSVHTKKHVDLINKIS---SKLY 83
HP P R+ + + + S + + + KA +L H+ +V+ +++I+ L+
Sbjct: 24 HPMKPHRLCMTHHLVLSYDLHKKMEVYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
Query: 84 DSRRLKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHSAVAVVRPPG-HHAEP 142
K D F + E + AG I+ +R+ ++ +A+ G HHA+
Sbjct: 84 SDELAKYNLGEDCPVF-DNLFEFCQMYAGGTIDAARRLNNKL--CDIAINWAGGLHHAKK 140
Query: 143 NEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSRVLFFSVH 202
EA GFC N++ + LL P ++L +D D+HHG+G ++ F RV+ +V
Sbjct: 141 CEASGFCYINDLVLGILELLKHHP-----RVLYIDIDVHHGDGVEEAFYFTDRVM--TVS 193
Query: 203 RHEFGS-FYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLPVAKEFS 261
H++G F+P + D IG+ G Y INVP ++G D+ + ++ I+ V + +
Sbjct: 194 SHKYGDLFFPGTGDA--KEIGEREGKFYAINVPLKDG-IDDSSFTRLFKTIISKVVETYQ 250
Query: 262 PDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVLE--GGYNLDSIAK 319
P I++ G D+ GD LG ++ G++ ++ + + V L++ GGY +++A+
Sbjct: 251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVR---FVKKFNVPLLVTGGGGYTKENVAR 307
Query: 320 SMHACLEVLLE 330
VLL+
Sbjct: 308 CWTVETGVLLD 318
>Medtr4g055080.2 | histone deacetylase family protein | HC |
chr4:20028709-20022768 | 20130731
Length = 405
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 148/307 (48%), Gaps = 23/307 (7%)
Query: 31 PDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLLSVHTKKHVDLINKIS---SKLYDSRR 87
P R+ + + + S + + + KA +L H+ +V+ +++I+ L+
Sbjct: 3 PHRLCMTHHLVLSYDLHKKMEVYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFSDEL 62
Query: 88 LKIAHKLDSVYFNEGSSEAAYLAAGSAIEVVKRVASRELHSAVAVVRPPG-HHAEPNEAK 146
K D F + E + AG I+ +R+ ++ +A+ G HHA+ EA
Sbjct: 63 AKYNLGEDCPVF-DNLFEFCQMYAGGTIDAARRLNNKL--CDIAINWAGGLHHAKKCEAS 119
Query: 147 GFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIHHGNGTQKIFLDDSRVLFFSVHRHEF 206
GFC N++ + LL P ++L +D D+HHG+G ++ F RV+ +V H++
Sbjct: 120 GFCYINDLVLGILELLKHHP-----RVLYIDIDVHHGDGVEEAFYFTDRVM--TVSSHKY 172
Query: 207 GS-FYPSSDDGFYTMIGKGAGAGYNINVPWENGRCGDADYIAVWDHILLPVAKEFSPDII 265
G F+P + D IG+ G Y INVP ++G D+ + ++ I+ V + + P I
Sbjct: 173 GDLFFPGTGDA--KEIGEREGKFYAINVPLKDG-IDDSSFTRLFKTIISKVVETYQPGAI 229
Query: 266 IVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAEGRVVLVLE--GGYNLDSIAKSMHA 323
++ G D+ GD LG ++ G++ ++ + + V L++ GGY +++A+
Sbjct: 230 VLQCGADSLAGDRLGCFNLSIDGHAECVR---FVKKFNVPLLVTGGGGYTKENVARCWTV 286
Query: 324 CLEVLLE 330
VLL+
Sbjct: 287 ETGVLLD 293
>Medtr1g016440.1 | histone deacetylase superfamily protein | HC |
chr1:4371842-4377658 | 20130731
Length = 350
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 143/340 (42%), Gaps = 35/340 (10%)
Query: 7 RVGLLYDERMCKHHVPDDGYHPETPDRIRVIWNKLQSTGITDRCVILEAKKAEDEQLLSV 66
+V L+Y + + + HP + I L S G+ D+ I+E +A + LL V
Sbjct: 32 KVPLIYSDSYDISFLGIEKLHPFDSSKWGRICKFLISFGVLDKNRIVEPLEASKDDLLVV 91
Query: 67 HTKKHVDLINKISSKLYDSRRLKIAHKLDSVYFNEGSSEAAYL-----AAGSAIEVVKRV 121
H++ +++ + + S KI F + L G I K
Sbjct: 92 HSESYLNSLKE------SSNVAKIIEVPPVALFPNCLVQRKVLFPFRKQVGGTILAAKLA 145
Query: 122 ASRELHSAVAVVRPPGHHAEPNEAKGFCLFNNVAVAASYLLDQRPDLGVKKILIVDWDIH 181
R V HH GFC + ++++ + Q L + +++I+D D H
Sbjct: 146 KERGWAINVG---GGFHHCSAENGGGFCAYADISLCIHFAFVQ---LNISRVIIIDLDAH 199
Query: 182 HGNGTQKIFLDDSRVLFFSVHRHEFGSFYPSSDDGFYTMIGKGAGAGYNINVPWENGRCG 241
GNG + F DD+RV ++ + G Y + A + N V ++G
Sbjct: 200 QGNGHEMDFADDNRVYILDMY-----------NPGIYPL-DHEARSYINQKVEVKSGTRT 247
Query: 242 DADYIAVWDHILLPVAKEFSPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLKKLLHLAE 301
+ +Y+ D L + F+P++++ +AG D GDPLG +++P G ++ +K+ A
Sbjct: 248 E-EYLLKLDEALEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFAR 306
Query: 302 GR---VVLVLEGGYNLDSIAKSMHACLEVLLEDKPLIGSS 338
+ +V++ GGY S + L LE K LI +S
Sbjct: 307 KKNIPIVMLTSGGYMKSSARVIADSILN--LEKKCLIETS 344