Miyakogusa Predicted Gene
- Lj4g3v1709660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1709660.1 Non Characterized Hit- tr|C6TG10|C6TG10_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,78.95,8e-18,Tmemb_40,Uncharacterised protein family,
transmembrane-40; INTEGRAL MEMBRANE PROTEIN GPR175
[SOURCE,CUFF.49616.1
(183 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g109480.1 | transmembrane protein, putative | HC | chr4:45... 301 2e-82
Medtr1g081910.1 | transmembrane protein, putative | HC | chr1:36... 245 2e-65
Medtr4g109480.3 | transmembrane protein, putative | HC | chr4:45... 201 4e-52
Medtr4g109480.2 | transmembrane protein, putative | HC | chr4:45... 161 4e-40
Medtr4g109480.4 | transmembrane protein, putative | HC | chr4:45... 160 6e-40
Medtr4g109480.5 | transmembrane protein, putative | HC | chr4:45... 160 6e-40
>Medtr4g109480.1 | transmembrane protein, putative | HC |
chr4:45483583-45488552 | 20130731
Length = 286
Score = 301 bits (771), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/185 (87%), Positives = 167/185 (90%), Gaps = 2/185 (1%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEA--LAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDV 58
ML LEISLMAFLL NYMN MEA L HT IVSGIIV VD LLKAIYVFGFGVPLFN +V
Sbjct: 102 MLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTLLKAIYVFGFGVPLFNRNV 161
Query: 59 GSTDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYVVVMFVFSAVTLFA 118
GST TIKW LW VHKLLLAAAYGFILF HFSKWREKLPPRP FYNYVVVMF+FSA+TLFA
Sbjct: 162 GSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPPRPTFYNYVVVMFIFSAITLFA 221
Query: 119 CGLSGIGAGLGSWLYNLTVLCYHSLYLPFLYVTFLADFFQEEDFLLDNAYYSEMKDAGFF 178
CGL+GIGAGLG+WLY+ TVLCYHSLYLPFLY TFLADFFQEEDFLLDNAYYSEMKDAGFF
Sbjct: 222 CGLAGIGAGLGNWLYDFTVLCYHSLYLPFLYATFLADFFQEEDFLLDNAYYSEMKDAGFF 281
Query: 179 DAEWE 183
DAEWE
Sbjct: 282 DAEWE 286
>Medtr1g081910.1 | transmembrane protein, putative | HC |
chr1:36494702-36498600 | 20130731
Length = 297
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 146/183 (79%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEALAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDVGS 60
ML LE+SL+AFLL+ N + +EAL TF +SGIIV D+LLKAIY+F FGVPLF +
Sbjct: 115 MLFLEVSLLAFLLQGNNASGVEALTRTFGISGIIVGFDVLLKAIYLFAFGVPLFIDTDHG 174
Query: 61 TDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYVVVMFVFSAVTLFACG 120
T +KW LW++HKL+L YG ILF++ S+WRE+LP RPAFY YV++MF+ +A+ LFACG
Sbjct: 175 TPRLKWNLWVIHKLVLTVVYGLILFMYHSRWRERLPARPAFYKYVIIMFILNAIALFACG 234
Query: 121 LSGIGAGLGSWLYNLTVLCYHSLYLPFLYVTFLADFFQEEDFLLDNAYYSEMKDAGFFDA 180
L+G GAG G W Y++T++ YH+ YLP LY+TFLADFFQEEDF ++N YYSEMKDAGFF++
Sbjct: 235 LTGNGAGFGFWFYHVTIVSYHAFYLPLLYITFLADFFQEEDFHMENVYYSEMKDAGFFES 294
Query: 181 EWE 183
+WE
Sbjct: 295 DWE 297
>Medtr4g109480.3 | transmembrane protein, putative | HC |
chr4:45483583-45488552 | 20130731
Length = 234
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEA--LAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDV 58
ML LEISLMAFLL NYMN MEA L HT IVSGIIV VD LLKAIYVFGFGVPLFN +V
Sbjct: 102 MLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTLLKAIYVFGFGVPLFNRNV 161
Query: 59 GSTDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYVVVMFVFSAVTLFA 118
GST TIKW LW VHKLLLAAAYGFILF HFSKWREKLPPRP FYNYVVVMF+FSA+TLFA
Sbjct: 162 GSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPPRPTFYNYVVVMFIFSAITLFA 221
Query: 119 C 119
C
Sbjct: 222 C 222
>Medtr4g109480.2 | transmembrane protein, putative | HC |
chr4:45483583-45488552 | 20130731
Length = 240
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 90/113 (79%), Gaps = 2/113 (1%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEA--LAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDV 58
ML LEISLMAFLL NYMN MEA L HT IVSGIIV VD LLKAIYVFGFGVPLFN +V
Sbjct: 102 MLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTLLKAIYVFGFGVPLFNRNV 161
Query: 59 GSTDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYVVVMFVF 111
GST TIKW LW VHKLLLAAAYGFILF HFSKWREKLP YV+ +++F
Sbjct: 162 GSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPRCMILLYYVITLYIF 214
>Medtr4g109480.4 | transmembrane protein, putative | HC |
chr4:45483583-45488552 | 20130731
Length = 213
Score = 160 bits (405), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEA--LAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDV 58
ML LEISLMAFLL NYMN MEA L HT IVSGIIV VD LLKAIYVFGFGVPLFN +V
Sbjct: 102 MLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTLLKAIYVFGFGVPLFNRNV 161
Query: 59 GSTDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYV 105
GST TIKW LW VHKLLLAAAYGFILF HFSKWREKLP ++N V
Sbjct: 162 GSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPREYTYFNTV 208
>Medtr4g109480.5 | transmembrane protein, putative | HC |
chr4:45483583-45488552 | 20130731
Length = 213
Score = 160 bits (405), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/107 (78%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
Query: 1 MLCLEISLMAFLLKDNYMNAMEA--LAHTFIVSGIIVFVDILLKAIYVFGFGVPLFNNDV 58
ML LEISLMAFLL NYMN MEA L HT IVSGIIV VD LLKAIYVFGFGVPLFN +V
Sbjct: 102 MLYLEISLMAFLLNVNYMNGMEAQALVHTSIVSGIIVLVDTLLKAIYVFGFGVPLFNRNV 161
Query: 59 GSTDTIKWCLWIVHKLLLAAAYGFILFVHFSKWREKLPPRPAFYNYV 105
GST TIKW LW VHKLLLAAAYGFILF HFSKWREKLP ++N V
Sbjct: 162 GSTHTIKWGLWTVHKLLLAAAYGFILFEHFSKWREKLPREYTYFNTV 208