Miyakogusa Predicted Gene

Lj4g3v1684380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1684380.1 tr|F2EID4|F2EID4_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,44.12,3e-18,seg,NULL,CUFF.49601.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109400.1 | hypothetical protein | HC | chr4:45434653-4543...   331   7e-91
Medtr4g109400.2 | hypothetical protein | HC | chr4:45434653-4543...   254   1e-67
Medtr4g109400.4 | hypothetical protein | HC | chr4:45434726-4543...   218   8e-57
Medtr4g109400.3 | hypothetical protein | HC | chr4:45434653-4543...   216   3e-56

>Medtr4g109400.1 | hypothetical protein | HC |
           chr4:45434653-45439265 | 20130731
          Length = 300

 Score =  331 bits (848), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 180/281 (64%), Positives = 205/281 (72%), Gaps = 5/281 (1%)

Query: 44  SPLPSSVLRLWRQAAQRNLRNRWTQLASYKDQWSSISSAARSHATALVNSHLSIRYMPSV 103
           SPLPSS+LRLWRQAAQRNLRN+W+QLA  KD+WSSISS+ARS+ATALVNSHL  RYMP++
Sbjct: 23  SPLPSSMLRLWRQAAQRNLRNQWSQLAPLKDKWSSISSSARSYATALVNSHLFQRYMPNM 82

Query: 104 KLGVLSDMPNIRERACFXXXXXXXXXXXXXXXSYKEXXXXXXXXXXXXRLMKCFFKGSNC 163
           KLGVLSDMP+IR+RACF               SYK+            R MKC+ +GSN 
Sbjct: 83  KLGVLSDMPDIRKRACFKLFKQQELQRSQLLQSYKDMVGVVSKMVNVSRSMKCYSRGSNN 142

Query: 164 SSLLQFSCYSEDQXXXXXXXXXXXIPVFAFLPISSHDKLAEELVQMFIXXXXXXXXXXXX 223
           S LLQFS Y +DQ           IPVFAFL ISSH++L EELVQMF             
Sbjct: 143 SPLLQFSNYPKDQ---SNSGDGGGIPVFAFLSISSHEQLVEELVQMFRFELCLKRLLVLQ 199

Query: 224 XMSVGNDPSQVNQLSWSAQLYNDEFKDLRDCNLFSEDG--PVPPRLKDGKSDMVALKFDN 281
            +S+G D SQVN+L WSAQLY DEFKDL DCNLF E    PVPPRL+DGKSDM AL+FDN
Sbjct: 200 FISIGYDASQVNKLHWSAQLYADEFKDLSDCNLFCEVTCVPVPPRLRDGKSDMGALRFDN 259

Query: 282 QPSPEVLQVYLTTWLAELNIDTFRVNEIFAVVGEEMHVSIG 322
           QP+PEVLQVYLT+WLAE+NI+T RVNEIFAVVGEEMHVSIG
Sbjct: 260 QPNPEVLQVYLTSWLAEVNINTLRVNEIFAVVGEEMHVSIG 300


>Medtr4g109400.2 | hypothetical protein | HC |
           chr4:45434653-45439265 | 20130731
          Length = 222

 Score =  254 bits (648), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/225 (59%), Positives = 153/225 (68%), Gaps = 5/225 (2%)

Query: 100 MPSVKLGVLSDMPNIRERACFXXXXXXXXXXXXXXXSYKEXXXXXXXXXXXXRLMKCFFK 159
           MP++KLGVLSDMP+IR+RACF               SYK+            R MKC+ +
Sbjct: 1   MPNMKLGVLSDMPDIRKRACFKLFKQQELQRSQLLQSYKDMVGVVSKMVNVSRSMKCYSR 60

Query: 160 GSNCSSLLQFSCYSEDQXXXXXXXXXXXIPVFAFLPISSHDKLAEELVQMFIXXXXXXXX 219
           GSN S LLQFS Y +DQ           IPVFAFL ISSH++L EELVQMF         
Sbjct: 61  GSNNSPLLQFSNYPKDQSNSGDGGG---IPVFAFLSISSHEQLVEELVQMFRFELCLKRL 117

Query: 220 XXXXXMSVGNDPSQVNQLSWSAQLYNDEFKDLRDCNLFSEDG--PVPPRLKDGKSDMVAL 277
                +S+G D SQVN+L WSAQLY DEFKDL DCNLF E    PVPPRL+DGKSDM AL
Sbjct: 118 LVLQFISIGYDASQVNKLHWSAQLYADEFKDLSDCNLFCEVTCVPVPPRLRDGKSDMGAL 177

Query: 278 KFDNQPSPEVLQVYLTTWLAELNIDTFRVNEIFAVVGEEMHVSIG 322
           +FDNQP+PEVLQVYLT+WLAE+NI+T RVNEIFAVVGEEMHVSIG
Sbjct: 178 RFDNQPNPEVLQVYLTSWLAEVNINTLRVNEIFAVVGEEMHVSIG 222


>Medtr4g109400.4 | hypothetical protein | HC |
           chr4:45434726-45439265 | 20130731
          Length = 175

 Score =  218 bits (554), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 114/173 (65%), Positives = 128/173 (73%), Gaps = 5/173 (2%)

Query: 152 RLMKCFFKGSNCSSLLQFSCYSEDQXXXXXXXXXXXIPVFAFLPISSHDKLAEELVQMFI 211
           R MKC+ +GSN S LLQFS Y +DQ           IPVFAFL ISSH++L EELVQMF 
Sbjct: 6   RSMKCYSRGSNNSPLLQFSNYPKDQSNSGDGGG---IPVFAFLSISSHEQLVEELVQMFR 62

Query: 212 XXXXXXXXXXXXXMSVGNDPSQVNQLSWSAQLYNDEFKDLRDCNLFSEDG--PVPPRLKD 269
                        +S+G D SQVN+L WSAQLY DEFKDL DCNLF E    PVPPRL+D
Sbjct: 63  FELCLKRLLVLQFISIGYDASQVNKLHWSAQLYADEFKDLSDCNLFCEVTCVPVPPRLRD 122

Query: 270 GKSDMVALKFDNQPSPEVLQVYLTTWLAELNIDTFRVNEIFAVVGEEMHVSIG 322
           GKSDM AL+FDNQP+PEVLQVYLT+WLAE+NI+T RVNEIFAVVGEEMHVSIG
Sbjct: 123 GKSDMGALRFDNQPNPEVLQVYLTSWLAEVNINTLRVNEIFAVVGEEMHVSIG 175


>Medtr4g109400.3 | hypothetical protein | HC |
           chr4:45434653-45439265 | 20130731
          Length = 168

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 113/171 (66%), Positives = 127/171 (74%), Gaps = 5/171 (2%)

Query: 154 MKCFFKGSNCSSLLQFSCYSEDQXXXXXXXXXXXIPVFAFLPISSHDKLAEELVQMFIXX 213
           MKC+ +GSN S LLQFS Y +DQ           IPVFAFL ISSH++L EELVQMF   
Sbjct: 1   MKCYSRGSNNSPLLQFSNYPKDQSNSGDGGG---IPVFAFLSISSHEQLVEELVQMFRFE 57

Query: 214 XXXXXXXXXXXMSVGNDPSQVNQLSWSAQLYNDEFKDLRDCNLFSEDG--PVPPRLKDGK 271
                      +S+G D SQVN+L WSAQLY DEFKDL DCNLF E    PVPPRL+DGK
Sbjct: 58  LCLKRLLVLQFISIGYDASQVNKLHWSAQLYADEFKDLSDCNLFCEVTCVPVPPRLRDGK 117

Query: 272 SDMVALKFDNQPSPEVLQVYLTTWLAELNIDTFRVNEIFAVVGEEMHVSIG 322
           SDM AL+FDNQP+PEVLQVYLT+WLAE+NI+T RVNEIFAVVGEEMHVSIG
Sbjct: 118 SDMGALRFDNQPNPEVLQVYLTSWLAEVNINTLRVNEIFAVVGEEMHVSIG 168