Miyakogusa Predicted Gene

Lj4g3v1683300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1683300.1 tr|Q6X9T2|Q6X9T2_HORVD SNAP25-like protein C
(Fragment) OS=Hordeum vulgare var. distichum PE=4
SV=1,52.38,1e-18,Helical region found in SNAREs,Target SNARE
coiled-coil domain; T_SNARE,Target SNARE coiled-coil dom,CUFF.49596.1
         (305 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g109310.1 | soluble N-ethylmaleimide-sensitive factor adap...   387   e-108
Medtr3g023720.1 | soluble N-ethylmaleimide-sensitive factor adap...   300   2e-81
Medtr8g021950.1 | soluble N-ethylmaleimide-sensitive factor adap...   277   9e-75
Medtr3g023720.2 | soluble N-ethylmaleimide-sensitive factor adap...   253   1e-67
Medtr5g043850.1 | soluble N-ethylmaleimide-sensitive factor adap...   213   2e-55

>Medtr4g109310.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr4:45393006-45391267 | 20130731
          Length = 300

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/284 (71%), Positives = 223/284 (78%), Gaps = 1/284 (0%)

Query: 23  VKSGSNPFDSDDEGNDNKKYNSSRKTSS-ERALATLEVNTNPFDDVDDTKKPSSSLYAAP 81
           VKS SNPFDSDDE ND++K +SS+KTSS ERAL TLEVNTNPFDDVDD KK  SS YA  
Sbjct: 17  VKSWSNPFDSDDEENDSRKTSSSKKTSSSERALVTLEVNTNPFDDVDDGKKTPSSTYAHR 76

Query: 82  SADRNRYRNDFRESGGVENQSVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVT 141
           SADRNRY+N FR+SGGVENQS+QELE+YAVYKAEETTKSV+NCLKIAENIREDA KTLVT
Sbjct: 77  SADRNRYKNHFRDSGGVENQSMQELENYAVYKAEETTKSVHNCLKIAENIREDAAKTLVT 136

Query: 142 LHQQGEQITRSHYVAADIDHDXXXXXXXXXXXXXXXXKTWKPKKTRAIRGPVIFGDNPVS 201
           LH QGEQITRSH+VA DID D                KTWKPKKTR I GPVIFGD+ V 
Sbjct: 137 LHHQGEQITRSHHVATDIDRDLSRGEKLLGSLGGLFSKTWKPKKTRTITGPVIFGDDAVR 196

Query: 202 RQANHLEQREKLGLTSAPRGQTKMRTPPHESSTALQKVEFEKGKQXXXXXXXXXXXXXXX 261
           R+ NHLEQREKLGLTSA  GQ+++RTPP E + AL KVEFEKGKQ               
Sbjct: 197 RKGNHLEQREKLGLTSASEGQSRLRTPPQEPTDALTKVEFEKGKQDDALSNLSDLLGELK 256

Query: 262 XMAIDMGSEIERHNKALSHLDDDVEELNFRVKGANQRGRRLLGK 305
            MA+DMGSEIERHNKAL HLDDDV+ELNFRVKGANQR RRL+GK
Sbjct: 257 DMAVDMGSEIERHNKALGHLDDDVDELNFRVKGANQRARRLMGK 300


>Medtr3g023720.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr3:7218102-7214079 | 20130731
          Length = 296

 Score =  300 bits (767), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 159/282 (56%), Positives = 189/282 (67%)

Query: 24  KSGSNPFDSDDEGNDNKKYNSSRKTSSERALATLEVNTNPFDDVDDTKKPSSSLYAAPSA 83
           +S  NPFDSD+E  DN+K  SS+K SS+  L   + NTNPFDDVD     SSS YA    
Sbjct: 15  RSKHNPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNPFDDVDARGHSSSSSYAPSYG 74

Query: 84  DRNRYRNDFRESGGVENQSVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLH 143
           +RN Y+NDFR+SGG+++QSV++LE YAVYKAEETTKSVNNC KIAE +REDATKTLV LH
Sbjct: 75  NRNMYKNDFRDSGGLQSQSVEDLEEYAVYKAEETTKSVNNCRKIAEEMREDATKTLVMLH 134

Query: 144 QQGEQITRSHYVAADIDHDXXXXXXXXXXXXXXXXKTWKPKKTRAIRGPVIFGDNPVSRQ 203
            QGEQITRSH +AA IDH+                KTWKPKKT  I GP IFGD+PV + 
Sbjct: 135 HQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGIFSKTWKPKKTGTITGPTIFGDDPVRKS 194

Query: 204 ANHLEQREKLGLTSAPRGQTKMRTPPHESSTALQKVEFEKGKQXXXXXXXXXXXXXXXXM 263
           ANHLEQREKLGL SAP+GQ+K R    E + A ++VE EK KQ                M
Sbjct: 195 ANHLEQREKLGLNSAPKGQSKPRKALSEPTNAFERVEVEKEKQDDALSDISDLLGELKGM 254

Query: 264 AIDMGSEIERHNKALSHLDDDVEELNFRVKGANQRGRRLLGK 305
           A+DMG+EIER  KA+   + D E+LN R+ GANQR   LL K
Sbjct: 255 AMDMGTEIERQTKAIDGFEKDTEKLNIRMNGANQRTLHLLRK 296


>Medtr8g021950.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr8:7766732-7768791 | 20130731
          Length = 227

 Score =  277 bits (708), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 137/214 (64%), Positives = 157/214 (73%)

Query: 91  DFRESGGVENQSVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLHQQGEQIT 150
           + RESGG EN SVQELE YAV+KAEETTKSV NCLKIAENIRE+ATKT VTLH QGEQIT
Sbjct: 13  NLRESGGSENDSVQELEDYAVHKAEETTKSVQNCLKIAENIRENATKTFVTLHHQGEQIT 72

Query: 151 RSHYVAADIDHDXXXXXXXXXXXXXXXXKTWKPKKTRAIRGPVIFGDNPVSRQANHLEQR 210
           R+H+VAADID                  KTWKPKKTR I GPVIFGD+ V R+ +HL+QR
Sbjct: 73  RTHHVAADIDGHLSRGEKLLRSLGGLFSKTWKPKKTRKITGPVIFGDDAVRRKVSHLKQR 132

Query: 211 EKLGLTSAPRGQTKMRTPPHESSTALQKVEFEKGKQXXXXXXXXXXXXXXXXMAIDMGSE 270
           EKLGL SA +GQ+++RTPP E + AL+KVEFEKG Q                MA+ MGSE
Sbjct: 133 EKLGLPSASKGQSRLRTPPQEPTVALEKVEFEKGNQDDALSNLSDLLGEVKDMAVHMGSE 192

Query: 271 IERHNKALSHLDDDVEELNFRVKGANQRGRRLLG 304
           IER NKALSH +DDV+ELNFR+KGAN+R  RLLG
Sbjct: 193 IERQNKALSHFEDDVDELNFRLKGANRRANRLLG 226


>Medtr3g023720.2 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr3:7218060-7214990 | 20130731
          Length = 260

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 131/217 (60%), Positives = 155/217 (71%)

Query: 24  KSGSNPFDSDDEGNDNKKYNSSRKTSSERALATLEVNTNPFDDVDDTKKPSSSLYAAPSA 83
           +S  NPFDSD+E  DN+K  SS+K SS+  L   + NTNPFDDVD     SSS YA    
Sbjct: 15  RSKHNPFDSDEEKKDNRKNISSKKNSSQYNLVQRDTNTNPFDDVDARGHSSSSSYAPSYG 74

Query: 84  DRNRYRNDFRESGGVENQSVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLH 143
           +RN Y+NDFR+SGG+++QSV++LE YAVYKAEETTKSVNNC KIAE +REDATKTLV LH
Sbjct: 75  NRNMYKNDFRDSGGLQSQSVEDLEEYAVYKAEETTKSVNNCRKIAEEMREDATKTLVMLH 134

Query: 144 QQGEQITRSHYVAADIDHDXXXXXXXXXXXXXXXXKTWKPKKTRAIRGPVIFGDNPVSRQ 203
            QGEQITRSH +AA IDH+                KTWKPKKT  I GP IFGD+PV + 
Sbjct: 135 HQGEQITRSHDIAAGIDHNLSRGEKLLGSLGGIFSKTWKPKKTGTITGPTIFGDDPVRKS 194

Query: 204 ANHLEQREKLGLTSAPRGQTKMRTPPHESSTALQKVE 240
           ANHLEQREKLGL SAP+GQ+K R    E + A ++VE
Sbjct: 195 ANHLEQREKLGLNSAPKGQSKPRKALSEPTNAFERVE 231


>Medtr5g043850.1 | soluble N-ethylmaleimide-sensitive factor adaptor
           protein | HC | chr5:19257687-19255958 | 20130731
          Length = 271

 Score =  213 bits (542), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/264 (46%), Positives = 157/264 (59%), Gaps = 18/264 (6%)

Query: 45  SRKTSSERALATLEVNTNPFDDVDDT---KKPSSSLYAAPSADRNRYRNDFRESGGVENQ 101
           +R+TSSE  L   +   N FD+ DD    +KP+SS  +                GG+ENQ
Sbjct: 23  ARRTSSEPVLPVPKSKGNYFDEDDDDDWGRKPASSAAS---------------KGGLENQ 67

Query: 102 SVQELESYAVYKAEETTKSVNNCLKIAENIREDATKTLVTLHQQGEQITRSHYVAADIDH 161
           SVQELE+YAV KAEETT SVNNCL+IAE+IR DAT+TL  LHQQG+QITR+H +  D + 
Sbjct: 68  SVQELENYAVNKAEETTNSVNNCLRIAEDIRSDATRTLDMLHQQGDQITRTHNMVVDTEK 127

Query: 162 DXXXXXXXXXXXXXXXXKTWKPKKTRAIRGPVIFGDNPVSRQANHLEQREKLGLTSAPRG 221
           D                K WKPKK +AI GPVI  D+   +     E R KLGL   P+G
Sbjct: 128 DLSRGEKLLNNLGGMFSKPWKPKKGKAITGPVITSDHTSKKDVMSKEDRAKLGLAPLPKG 187

Query: 222 QTKMRTPPHESSTALQKVEFEKGKQXXXXXXXXXXXXXXXXMAIDMGSEIERHNKALSHL 281
           ++   TPP+ES  A QK+++EK KQ                MAI MG+E++  NKAL HL
Sbjct: 188 RSAPTTPPNESDNAYQKIDYEKAKQDDGLSELSDILGDLKGMAISMGTELDSQNKALDHL 247

Query: 282 DDDVEELNFRVKGANQRGRRLLGK 305
            DDV+ELN R+KGANQR R+L+ K
Sbjct: 248 GDDVDELNNRMKGANQRARKLVAK 271