Miyakogusa Predicted Gene

Lj4g3v1683090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1683090.1 tr|G7JGQ4|G7JGQ4_MEDTR Eukaryotic translation
initiation factor 5A-1 OS=Medicago truncatula
GN=MTR_4,43.75,5e-16,eIF-5a,Translation elongation factor, IF5A
C-terminal; TRANSLATION INITIATION FACTOR 5A-RELATED,Tran,CUFF.49625.1
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 |...   314   2e-86
Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 |...   314   2e-86
Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 |...   305   8e-84
Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 |...   305   1e-83
Medtr4g130917.1 | eukaryotic translation initiation factor 5A | ...   300   5e-82
Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 |...   252   1e-67
Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 |...   252   1e-67
Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 |...   252   1e-67
Medtr4g130917.2 | eukaryotic translation initiation factor 5A | ...   243   4e-65
Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 |...   211   3e-55
Medtr4g112440.1 | eukaryotic translation initiation factor 5A | ...   149   1e-36
Medtr4g130907.1 | eukaryotic translation initiation factor 5A | ...    89   2e-18

>Medtr3g437680.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12821900-12831383 | 20130731
          Length = 160

 Score =  314 bits (805), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/160 (95%), Positives = 154/160 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYI IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+G TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPKN 160
           D LLTQIKEGFAEGKDLVVSVMS+MGEEQINALKDIGPKN
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPKN 160


>Medtr3g437680.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr3:12827467-12831667 | 20130731
          Length = 160

 Score =  314 bits (805), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/160 (95%), Positives = 154/160 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNGYI IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+G TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPKN 160
           D LLTQIKEGFAEGKDLVVSVMS+MGEEQINALKDIGPKN
Sbjct: 121 DNLLTQIKEGFAEGKDLVVSVMSSMGEEQINALKDIGPKN 160


>Medtr5g042990.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 159

 Score =  305 bits (782), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 148/159 (93%), Positives = 153/159 (96%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
           + LL+QIK+GF EGKDL+VSVMSAMGEEQI  LKDIGPK
Sbjct: 121 ETLLSQIKDGFGEGKDLIVSVMSAMGEEQICGLKDIGPK 159


>Medtr4g109130.1 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276043 | 20130731
          Length = 160

 Score =  305 bits (781), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/160 (93%), Positives = 152/160 (95%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYI IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTE+G TKDDLKLPTD
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPKN 160
           D+LLTQIK+GFAEGKDLVVSVMSAMGEEQI ALKDIG KN
Sbjct: 121 DSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGKN 160


>Medtr4g130917.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581914-54579116 | 20130731
          Length = 159

 Score =  300 bits (767), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 145/159 (91%), Positives = 151/159 (94%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRKNGYI IK+RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT++G TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
           D+LLTQIK+GFA+GKDLVVSVMSAMGEEQI ALKDIGPK
Sbjct: 121 DSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159


>Medtr5g042990.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 146

 Score =  252 bits (644), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 122/138 (88%), Positives = 128/138 (92%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 DALLTQIKEGFAEGKDLV 138
           + LL+Q+    A  K ++
Sbjct: 121 ETLLSQVSCVIACCKHII 138


>Medtr5g042990.3 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905255 | 20130731
          Length = 141

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 120/127 (94%), Positives = 124/127 (97%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 DALLTQI 127
           + LL+Q+
Sbjct: 121 ETLLSQV 127


>Medtr5g042990.4 | eukaryotic translation initiation factor 5A4 | HC
           | chr5:18907263-18905199 | 20130731
          Length = 141

 Score =  252 bits (643), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 120/127 (94%), Positives = 124/127 (97%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFESKADAGASKTYPQQAGTIRKNG+I IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           VGIDIFTGKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD
Sbjct: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120

Query: 121 DALLTQI 127
           + LL+Q+
Sbjct: 121 ETLLSQV 127


>Medtr4g130917.2 | eukaryotic translation initiation factor 5A | HC
           | chr4:54581812-54579168 | 20130731
          Length = 150

 Score =  243 bits (621), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 115/127 (90%), Positives = 120/127 (94%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEHHFE  ADAGASKTYPQQAGTIRKNGYI IK+RPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIF GKKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVSLLT++G TKDDLKLPTD
Sbjct: 61  VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTD 120

Query: 121 DALLTQI 127
           D+LLTQ+
Sbjct: 121 DSLLTQM 127


>Medtr4g109130.2 | eukaryotic translation initiation factor 5A4 | HC
           | chr4:45278237-45276093 | 20130731
          Length = 124

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 103/120 (85%), Positives = 104/120 (86%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYI IKNRPCKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTD 120
           V IDIFT KKLEDIVPSSHNCDVPHV RTDYQLIDISEDGFVS+L         LKL  D
Sbjct: 61  VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSVLFALTKVSVCLKLLID 120


>Medtr4g112440.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:46048544-46047233 | 20130731
          Length = 93

 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/102 (71%), Positives = 78/102 (76%), Gaps = 10/102 (9%)

Query: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHF 60
           M +    FES ADAGA KT+PQQAGTIRKNGY+ IK RPCKVVEV TSKTGKHGHAKCHF
Sbjct: 1   MVEVAQQFESMADAGAFKTFPQQAGTIRKNGYVLIKGRPCKVVEVQTSKTGKHGHAKCHF 60

Query: 61  VGIDIFTGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFV 102
           VGID+ T +KLEDIVP SHNCDVPHV           EDGFV
Sbjct: 61  VGIDMVTAEKLEDIVPFSHNCDVPHVV----------EDGFV 92


>Medtr4g130907.1 | eukaryotic translation initiation factor 5A | HC
           | chr4:54576006-54573628 | 20130731
          Length = 145

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 66/128 (51%), Gaps = 48/128 (37%)

Query: 18  KTYPQQAGTIRKNGYINIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKLEDIVPS 77
           KTYP QAG IR+NGYI I++RP                                      
Sbjct: 42  KTYPLQAGNIRRNGYIVIESRP-------------------------------------- 63

Query: 78  SHNCDVPHVTRTDYQLIDISEDGFVSLLTESGGTKDDLKLPTDDALLTQIKEGFAEGKDL 137
              C VPHV R D +LIDISEDG VSLLT++G TKD L       +L  IKE FAEGKDL
Sbjct: 64  ---CKVPHVNRADDRLIDISEDGSVSLLTDNGSTKDTL-------VLGFIKEEFAEGKDL 113

Query: 138 VVSVMSAM 145
           +V V+SAM
Sbjct: 114 MVGVVSAM 121