Miyakogusa Predicted Gene
- Lj4g3v1658920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1658920.1 Non Characterized Hit- tr|Q94HA8|Q94HA8_ORYSJ
Putative uncharacterized protein OSJNBb0048A17.15
OS=O,41.79,2e-19,seg,NULL,CUFF.49556.1
(147 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g109010.1 | malectin/receptor-like kinase family protein |... 135 9e-33
Medtr8g037700.1 | malectin/receptor-like kinase family protein |... 72 2e-13
Medtr4g061930.1 | receptor-like kinase theseus protein | HC | ch... 64 6e-11
Medtr4g061833.2 | receptor-like kinase theseus protein | HC | ch... 64 6e-11
Medtr2g096160.1 | receptor-like kinase, putative | HC | chr2:410... 63 7e-11
Medtr8g467150.1 | receptor-like kinase, putative | LC | chr8:240... 63 1e-10
Medtr1g040073.1 | receptor-like kinase theseus protein | LC | ch... 62 2e-10
Medtr1g040077.1 | carbohydrate-binding protein of the ER protein... 62 2e-10
Medtr2g080220.1 | malectin/receptor-like kinase family protein |... 57 7e-09
Medtr1g100110.1 | malectin/receptor-like kinase family protein |... 53 1e-07
>Medtr4g109010.1 | malectin/receptor-like kinase family protein | HC
| chr4:45189349-45195370 | 20130731
Length = 1152
Score = 135 bits (341), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 81/120 (67%)
Query: 27 TNCASSTTDPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSIN 86
+N S+T D S SP VNYLIDCGSS T L DGR FKSDR D+Q+SVD IN
Sbjct: 31 SNSDSTTIDHSLSPYVNYLIDCGSSTKTQLIDGRIFKSDRETTSFLSTTEDIQVSVDFIN 90
Query: 87 INTXXXXXXXXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
IN +Q+ARV E+S+YTFYISK GRL++RLYFFP+ +PS+NLTS VFSV
Sbjct: 91 INLPPSLPPSSLPLYQTARVFTEQSSYTFYISKTGRLWIRLYFFPISNPSYNLTSFVFSV 150
>Medtr8g037700.1 | malectin/receptor-like kinase family protein | HC
| chr8:13975899-13972819 | 20130731
Length = 881
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 9/109 (8%)
Query: 38 FSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXXX 97
F P ++LIDCGS N L DGR FKSD D ++S ++ +
Sbjct: 59 FVPKDSFLIDCGSENVVTLPDGRQFKSDPQANSFLQAKDDYKVSATDADVPS-------- 110
Query: 98 XXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+ +AR+ +E+ Y+F++ +PG ++RL+F+P+ + F+L A FSV
Sbjct: 111 -PIYSTARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNSVFDLQKATFSV 158
>Medtr4g061930.1 | receptor-like kinase theseus protein | HC |
chr4:22955067-22952545 | 20130731
Length = 840
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 38 FSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDL--QISVDSININTXXXXXX 95
F P NYLIDCGS T + F SD D+ ++ SIN T
Sbjct: 28 FVPIDNYLIDCGSHTNTSIGSNLNFTSDTFFKNFLSTQEDILANTTLKSINSTTDFSPL- 86
Query: 96 XXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+Q+AR+ S YTF I+K GR ++RLYFFP ++NL++A F+V
Sbjct: 87 -----YQTARIFISSSKYTFPINKKGRHWIRLYFFPFSYQNYNLSAANFAV 132
>Medtr4g061833.2 | receptor-like kinase theseus protein | HC |
chr4:22904005-22900571 | 20130731
Length = 840
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 38 FSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDL--QISVDSININTXXXXXX 95
F P NYLIDCGS T + F SD D+ ++ SIN T
Sbjct: 28 FVPIDNYLIDCGSHTNTSIGSNLNFTSDTFFKNFLSTQEDILANTTLKSINSTTDFSPL- 86
Query: 96 XXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+Q+AR+ S YTF I+K GR ++RLYFFP ++NL++A F+V
Sbjct: 87 -----YQTARIFISSSKYTFPINKKGRHWIRLYFFPFSYQNYNLSAANFAV 132
>Medtr2g096160.1 | receptor-like kinase, putative | HC |
chr2:41050976-41047503 | 20130731
Length = 847
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 37 SFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXX 96
+F PS NYLIDCGS+ T + + R F SD ++ S S +++
Sbjct: 27 TFVPSDNYLIDCGSTTTTSVGN-RNFSSDSFHKKLLSTQQEILASTSSKSVSDVGDESPL 85
Query: 97 XXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+Q+AR+ S YTF I++ GR ++R YFFP +NL +A FSV
Sbjct: 86 ----YQTARIFTGSSKYTFPINQKGRHWIRFYFFPFIYDRYNLNAAKFSV 131
>Medtr8g467150.1 | receptor-like kinase, putative | LC |
chr8:24057031-24059307 | 20130731
Length = 758
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 25 LTTNCASSTTDPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDS 84
L N + SF P NYL+ CGSS+ + GRTF D + QI +
Sbjct: 16 LLLNVTCRESFASFHPIDNYLVACGSSHNVTFQ-GRTFVPD-----TEFEHSNFQIKAEK 69
Query: 85 ININTXXXXXXXXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVF 144
++ + SAR+ E+++YTF I + GR ++RL+F PLPD + N+T A+
Sbjct: 70 -SLVVSSKLNNTLSPLYNSARIFFEKASYTFKIQQHGRHWIRLHFHPLPDSNHNMTFALI 128
Query: 145 SV 146
+V
Sbjct: 129 TV 130
>Medtr1g040073.1 | receptor-like kinase theseus protein | LC |
chr1:14673093-14670691 | 20130731
Length = 751
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 25 LTTNCASSTTDPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDS 84
L T C S SF+P NYL+ CGSS+ GRTF D +LQI + +
Sbjct: 18 LYTICQESLA--SFNPIDNYLVACGSSHNITFH-GRTFTPD-----IEFEHSNLQI-IAN 68
Query: 85 ININTXXXXXXXXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVF 144
+++ + SAR+ E S+YTF I + GR ++RLYF PLPD + N T A
Sbjct: 69 KSLSVTSKLNNTLSPLYNSARLFFETSSYTFKIQQQGRHWIRLYFHPLPDSNPNTTFATI 128
Query: 145 SV 146
+V
Sbjct: 129 TV 130
>Medtr1g040077.1 | carbohydrate-binding protein of the ER protein |
LC | chr1:14678471-14675993 | 20130731
Length = 591
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 25 LTTNCASSTTDPSFSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDS 84
L T C S SF+P NYL+ CGSS+ GRTF D +LQI + +
Sbjct: 18 LYTICQESLA--SFNPIDNYLVACGSSHNITFH-GRTFTPD-----IEFEHSNLQI-IAN 68
Query: 85 ININTXXXXXXXXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVF 144
+++ + SAR+ E S+YTF I + GR ++RLYF PLPD + N T A
Sbjct: 69 KSLSVTSKLNNTLSPLYNSARLFFETSSYTFKIQQQGRHWIRLYFHPLPDSNPNTTFATI 128
Query: 145 SV 146
+V
Sbjct: 129 TV 130
>Medtr2g080220.1 | malectin/receptor-like kinase family protein | HC
| chr2:33870337-33873745 | 20130731
Length = 843
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 38 FSPSVNYLIDCGSSNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXXXX 97
++P NYLI CGSS + + +D R F D L + + +
Sbjct: 27 YTPHDNYLIACGSSKSINFQD-RVFVPDSQHST-------LVLKTGNSVVVGSSNSSVVP 78
Query: 98 XXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+QSAR+ E +Y F + + GR ++RLYF+PLP+ NLTSA +V
Sbjct: 79 SPIYQSARIFTERGSYRFDVQQ-GRHWIRLYFYPLPNSLHNLTSASVTV 126
>Medtr1g100110.1 | malectin/receptor-like kinase family protein | HC
| chr1:45100036-45097546 | 20130731
Length = 814
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 37 SFSPSVNYLIDCGS-SNATHLKDGRTFKSDRXXXXXXXXXXDLQISVDSININTXXXXXX 95
SF P NYLI+CGS SNA+ R F SD D DSI++ T
Sbjct: 37 SFVPIDNYLINCGSHSNASLFN--RLFMSDSTNPGSNFLSSD-----DSISL-TNKNPSP 88
Query: 96 XXXXXFQSARVLREESAYTFYISKPGRLFVRLYFFPLPDPSFNLTSAVFSV 146
+ +ARV Y F + K G +R +FFP D SF+L SA FSV
Sbjct: 89 NLQTLYHTARVFITTGRYRFNMKKNGTHLIRFHFFPFKDQSFDLKSAKFSV 139