Miyakogusa Predicted Gene

Lj4g3v1658890.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658890.2 tr|E3VJR1|E3VJR1_MAIZE PRR59 OS=Zea mays PE=2
SV=1,37.79,0.0000000000001,CCT,CCT domain; Response_reg,Signal
transduction response regulator, receiver domain;
RESPONSE_REGUL,CUFF.49575.2
         (563 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108880.2 | two-component response regulator-like APRR7 pr...   825   0.0  
Medtr4g108880.1 | two-component response regulator-like APRR7 pr...   825   0.0  
Medtr3g037390.1 | timing of cab expression 1/PRR response regula...   686   0.0  
Medtr3g037390.2 | timing of cab expression 1/PRR response regula...   541   e-154
Medtr4g061360.5 | PRR response regulator | HC | chr4:22682971-22...   129   1e-29
Medtr4g061360.1 | PRR response regulator | HC | chr4:22682971-22...   129   1e-29
Medtr4g061360.2 | PRR response regulator | HC | chr4:22682971-22...   129   1e-29
Medtr4g061360.3 | PRR response regulator | HC | chr4:22682971-22...   129   1e-29
Medtr4g061360.4 | PRR response regulator | HC | chr4:22682971-22...   129   1e-29
Medtr3g092780.3 | PRR response regulator | HC | chr3:42411881-42...   122   1e-27
Medtr3g092780.1 | PRR response regulator | HC | chr3:42411882-42...   120   3e-27
Medtr3g092780.2 | PRR response regulator | HC | chr3:42411881-42...   120   3e-27
Medtr3g092780.4 | PRR response regulator | HC | chr3:42411907-42...   120   3e-27
Medtr3g037400.1 | methyl-CpG-binding domain protein | LC | chr3:...   116   7e-26
Medtr7g118260.1 | PRR response regulator | HC | chr7:49081893-49...   111   2e-24
Medtr7g118260.2 | PRR response regulator | HC | chr7:49081784-49...   110   3e-24
Medtr8g024260.1 | PRR response regulator | LC | chr8:8900931-889...   110   4e-24
Medtr1g067110.5 | two-component response regulator-like APRR7 pr...   108   2e-23
Medtr1g067110.3 | two-component response regulator-like APRR7 pr...   108   2e-23
Medtr1g067110.4 | two-component response regulator-like APRR7 pr...   107   2e-23
Medtr1g067110.1 | two-component response regulator-like APRR7 pr...   107   2e-23
Medtr1g067110.2 | two-component response regulator-like APRR7 pr...   107   2e-23
Medtr1g067110.6 | two-component response regulator-like APRR7 pr...   107   2e-23
Medtr1g067110.7 | two-component response regulator-like APRR7 pr...   107   2e-23
Medtr3g086100.1 | two-component response regulator ARR2-like pro...    98   2e-20
Medtr2g034960.1 | B-type response regulator | HC | chr2:13431340...    96   7e-20
Medtr3g106220.1 | two-component response regulator ARR12-like pr...    94   3e-19
Medtr4g121020.1 | two-component response regulator ARR2-like pro...    94   4e-19
Medtr4g121020.3 | two-component response regulator ARR2-like pro...    94   4e-19
Medtr2g450070.2 | two-component response regulator ARR12-like pr...    92   2e-18
Medtr2g450070.1 | two-component response regulator ARR12-like pr...    92   2e-18
Medtr2g450070.3 | two-component response regulator ARR12-like pr...    92   2e-18
Medtr1g032570.1 | B-type response regulator | HC | chr1:11594538...    91   3e-18
Medtr3g102600.1 | two-component response regulator | HC | chr3:4...    90   8e-18
Medtr3g102600.2 | two-component response regulator | HC | chr3:4...    87   3e-17
Medtr8g079940.1 | two-component response regulator ARR2-like pro...    87   5e-17
Medtr4g131580.1 | two-component response regulator ARR12-like pr...    87   6e-17
Medtr1g013170.1 | response regulator | HC | chr1:2892386-2894964...    86   1e-16
Medtr4g131600.1 | two-component response regulator ARR12-like pr...    84   3e-16
Medtr4g131570.1 | two-component response regulator ARR12-like pr...    83   6e-16
Medtr1g013180.1 | response regulator | LC | chr1:2902323-2906821...    83   8e-16
Medtr7g117705.1 | response regulator | HC | chr7:48871635-488679...    82   2e-15
Medtr7g118260.3 | PRR response regulator | HC | chr7:49081893-49...    79   9e-15
Medtr7g118260.4 | PRR response regulator | HC | chr7:49081893-49...    79   1e-14
Medtr1g067110.8 | two-component response regulator-like APRR7 pr...    76   1e-13
Medtr3g102600.4 | two-component response regulator | HC | chr3:4...    69   2e-11
Medtr3g102600.3 | two-component response regulator | HC | chr3:4...    68   3e-11
Medtr5g014040.1 | two-component response regulator-APRR2-like pr...    64   3e-10
Medtr5g014040.3 | two-component response regulator-APRR2-like pr...    64   3e-10
Medtr5g014040.2 | two-component response regulator-APRR2-like pr...    64   3e-10
Medtr3g086100.2 | two-component response regulator ARR2-like pro...    64   3e-10
Medtr3g102590.1 | two-component response regulator | HC | chr3:4...    64   4e-10
Medtr1g032570.3 | B-type response regulator | HC | chr1:11594556...    63   1e-09
Medtr1g032570.2 | B-type response regulator | HC | chr1:11594538...    63   1e-09
Medtr3g102590.2 | two-component response regulator | HC | chr3:4...    62   1e-09
Medtr4g093730.1 | GATA transcription factor | HC | chr4:37055500...    61   2e-09
Medtr7g490310.2 | two-component response regulator ARR3-like pro...    61   3e-09
Medtr7g490310.1 | two-component response regulator ARR3-like pro...    61   3e-09
Medtr3g100040.1 | GATA transcription factor | HC | chr3:45925626...    60   5e-09
Medtr3g105710.1 | zinc finger constans-like protein | HC | chr3:...    60   5e-09
Medtr0450s0040.1 | response regulator receiver domain protein | ...    60   5e-09
Medtr3g100040.2 | GATA transcription factor | HC | chr3:45923987...    60   8e-09
Medtr5g066510.1 | GATA transcription factor | HC | chr5:28062542...    59   2e-08
Medtr5g066510.2 | GATA transcription factor | HC | chr5:28062546...    58   2e-08
Medtr3g037450.1 | timing of cab expression 1/PRR response regula...    58   2e-08
Medtr5g036480.1 | two-component response regulator ARR3-like pro...    57   4e-08
Medtr4g106590.1 | two-component response regulator ARR3-like pro...    57   4e-08
Medtr1g013450.1 | zinc finger constans-like protein | HC | chr1:...    57   5e-08
Medtr5g072780.1 | CCT motif protein | HC | chr5:30979956-3098159...    57   6e-08
Medtr1g013160.1 | two-component response regulator ARR12-like pr...    56   1e-07
Medtr4g098870.2 | two-component response regulator-APRR2-like pr...    55   1e-07
Medtr4g128930.1 | zinc finger constans-like protein | HC | chr4:...    55   1e-07
Medtr4g098870.4 | two-component response regulator-APRR2-like pr...    55   2e-07
Medtr4g098870.5 | two-component response regulator-APRR2-like pr...    55   2e-07
Medtr4g098870.3 | two-component response regulator-APRR2-like pr...    55   2e-07
Medtr4g098870.6 | two-component response regulator-APRR2-like pr...    55   2e-07
Medtr4g098870.1 | two-component response regulator-APRR2-like pr...    55   2e-07
Medtr7g032240.1 | CCT motif protein | HC | chr7:11334447-1133006...    55   3e-07
Medtr1g049100.1 | two-component response regulator ARR3-like pro...    54   3e-07
Medtr7g026400.1 | response regulator receiver domain protein | L...    54   3e-07
Medtr7g018170.1 | zinc finger constans-like protein | HC | chr7:...    53   8e-07
Medtr1g110870.1 | zinc finger constans-like protein | HC | chr1:...    52   1e-06
Medtr3g082630.1 | B-box type zinc finger protein | HC | chr3:372...    52   1e-06
Medtr3g082630.2 | B-box type zinc finger protein | HC | chr3:372...    52   1e-06
Medtr2g096080.1 | CCT motif protein | HC | chr2:41011109-4101337...    52   2e-06
Medtr8g093040.1 | response regulator receiver domain protein | L...    51   2e-06
Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-1692325...    51   3e-06
Medtr7g108150.1 | zinc finger constans-like protein | HC | chr7:...    51   3e-06
Medtr3g078613.1 | two-component response regulator ARR3-like pro...    50   4e-06
Medtr8g104190.1 | zinc finger constans-like protein | HC | chr8:...    50   4e-06
Medtr8g098725.2 | CCT motif protein | HC | chr8:41224283-4122117...    50   4e-06
Medtr8g098725.1 | CCT motif protein | HC | chr8:41223454-4122117...    50   5e-06
Medtr4g021845.1 | two-component sensor histidine kinase, putativ...    50   7e-06

>Medtr4g108880.2 | two-component response regulator-like APRR7
           protein | HC | chr4:45127441-45132438 | 20130731
          Length = 585

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 464/585 (79%), Gaps = 26/585 (4%)

Query: 4   EAEEILNLNSRENNCGGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTP 63
           + EE+++LNS+E NCGG NSKSGD FIDRSKVRILLCD D KSSEEVFTLL+ CSYQVT 
Sbjct: 2   DTEELIDLNSKELNCGGNNSKSGDGFIDRSKVRILLCDSDSKSSEEVFTLLINCSYQVTS 61

Query: 64  VRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVP 123
           V+SARQVIDALNAEGQYIDIILAEVDLPIKKGMK+LKY++RDKELRRIP+IMMSA+DEV 
Sbjct: 62  VKSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPIIMMSAQDEVS 121

Query: 124 IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDAN 183
           IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL E NIL+YDFD+VASDPSDAN
Sbjct: 122 IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLIENNILNYDFDLVASDPSDAN 181

Query: 184 TNSTTLFXXXXXXXXXXXXNPEAA---QQE--------PEVSISKAAAVIEELPGAQISE 232
           TNS T F            NPEA    QQE         E SI+ AAAVIEE P   +SE
Sbjct: 182 TNSATFFSDDTDDKSKRSNNPEAGISIQQEQAEISIQQEEASIATAAAVIEEHPYVHVSE 241

Query: 233 CRPNVPGISDRR--------------TGNFSSGPKKSELRIGESSAFFTYVKATTLKSNV 278
            +P+VPGISDRR              T +   GPKKSELRIGESSAFFTYVKATT+K N+
Sbjct: 242 YQPDVPGISDRRRTGSSAPHPPCNRVTNSSFDGPKKSELRIGESSAFFTYVKATTMKRNL 301

Query: 279 QEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQEMFESRSQEDLPSSNSFPDSFSI 338
           +EIAH+DN  T  VRVEDMNQAC++Q  NDL  HEN E  ES SQ+DLP SNS PDSFS+
Sbjct: 302 EEIAHLDNSGTLLVRVEDMNQACSQQGGNDLIRHENGETIESHSQDDLPRSNSIPDSFSV 361

Query: 339 ERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMPAQHAYPYYYNSGVVN 398
           ERSCTPPAS+EVSQQ +  +E +PQG ++P NGS GS+L  SGMPAQHAYPYY   GV N
Sbjct: 362 ERSCTPPASMEVSQQNSNHKEKHPQGVVHPRNGSYGSELNQSGMPAQHAYPYYM-PGVAN 420

Query: 399 HVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTSFPYYPMNICLQPGQV 458
           HVM+ S+  +YQKN+Q++ SH +SSMI+QYN L QC PHA GM  +PY+PM+ICLQ GQV
Sbjct: 421 HVMMQSATHMYQKNIQNLQSHVSSSMISQYNQLPQCPPHATGMAPYPYFPMSICLQTGQV 480

Query: 459 STPHSWPSLGSSGSCEVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRV 518
           ST H WPSLGSS SCE NL K DRREAALMKF+QKRK+RCFDKKIRYVNRK+LAERRPRV
Sbjct: 481 STVHPWPSLGSSTSCEANLRKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRV 540

Query: 519 RGQFVRKLSGVDVYLNGQPASADYDXXXXXXXDNHVARDSSLEDA 563
           RGQFVRKL+G++V LNGQPAS DYD       +N+  RDSS +DA
Sbjct: 541 RGQFVRKLNGINVDLNGQPASTDYDDEDEEEEENNDTRDSSPKDA 585


>Medtr4g108880.1 | two-component response regulator-like APRR7
           protein | HC | chr4:45127441-45132453 | 20130731
          Length = 585

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/585 (70%), Positives = 464/585 (79%), Gaps = 26/585 (4%)

Query: 4   EAEEILNLNSRENNCGGANSKSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTP 63
           + EE+++LNS+E NCGG NSKSGD FIDRSKVRILLCD D KSSEEVFTLL+ CSYQVT 
Sbjct: 2   DTEELIDLNSKELNCGGNNSKSGDGFIDRSKVRILLCDSDSKSSEEVFTLLINCSYQVTS 61

Query: 64  VRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVP 123
           V+SARQVIDALNAEGQYIDIILAEVDLPIKKGMK+LKY++RDKELRRIP+IMMSA+DEV 
Sbjct: 62  VKSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPIIMMSAQDEVS 121

Query: 124 IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDAN 183
           IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGL E NIL+YDFD+VASDPSDAN
Sbjct: 122 IVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLIENNILNYDFDLVASDPSDAN 181

Query: 184 TNSTTLFXXXXXXXXXXXXNPEAA---QQE--------PEVSISKAAAVIEELPGAQISE 232
           TNS T F            NPEA    QQE         E SI+ AAAVIEE P   +SE
Sbjct: 182 TNSATFFSDDTDDKSKRSNNPEAGISIQQEQAEISIQQEEASIATAAAVIEEHPYVHVSE 241

Query: 233 CRPNVPGISDRR--------------TGNFSSGPKKSELRIGESSAFFTYVKATTLKSNV 278
            +P+VPGISDRR              T +   GPKKSELRIGESSAFFTYVKATT+K N+
Sbjct: 242 YQPDVPGISDRRRTGSSAPHPPCNRVTNSSFDGPKKSELRIGESSAFFTYVKATTMKRNL 301

Query: 279 QEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQEMFESRSQEDLPSSNSFPDSFSI 338
           +EIAH+DN  T  VRVEDMNQAC++Q  NDL  HEN E  ES SQ+DLP SNS PDSFS+
Sbjct: 302 EEIAHLDNSGTLLVRVEDMNQACSQQGGNDLIRHENGETIESHSQDDLPRSNSIPDSFSV 361

Query: 339 ERSCTPPASVEVSQQKNFREEYYPQGSLYPSNGSRGSKLEPSGMPAQHAYPYYYNSGVVN 398
           ERSCTPPAS+EVSQQ +  +E +PQG ++P NGS GS+L  SGMPAQHAYPYY   GV N
Sbjct: 362 ERSCTPPASMEVSQQNSNHKEKHPQGVVHPRNGSYGSELNQSGMPAQHAYPYYM-PGVAN 420

Query: 399 HVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMTSFPYYPMNICLQPGQV 458
           HVM+ S+  +YQKN+Q++ SH +SSMI+QYN L QC PHA GM  +PY+PM+ICLQ GQV
Sbjct: 421 HVMMQSATHMYQKNIQNLQSHVSSSMISQYNQLPQCPPHATGMAPYPYFPMSICLQTGQV 480

Query: 459 STPHSWPSLGSSGSCEVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRV 518
           ST H WPSLGSS SCE NL K DRREAALMKF+QKRK+RCFDKKIRYVNRK+LAERRPRV
Sbjct: 481 STVHPWPSLGSSTSCEANLRKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRV 540

Query: 519 RGQFVRKLSGVDVYLNGQPASADYDXXXXXXXDNHVARDSSLEDA 563
           RGQFVRKL+G++V LNGQPAS DYD       +N+  RDSS +DA
Sbjct: 541 RGQFVRKLNGINVDLNGQPASTDYDDEDEEEEENNDTRDSSPKDA 585


>Medtr3g037390.1 | timing of cab expression 1/PRR response regulator
           | HC | chr3:13734998-13728441 | 20130731
          Length = 575

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/573 (61%), Positives = 419/573 (73%), Gaps = 43/573 (7%)

Query: 24  KSGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDI 83
           K GD F+DRSKVRILLCD D  +S+EVFTLL++C YQV  V+SARQVIDALNAE + ID+
Sbjct: 13  KIGDGFVDRSKVRILLCDTDSNTSQEVFTLLLRCCYQVISVKSARQVIDALNAEKETIDL 72

Query: 84  ILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRT 143
           ILAEV LP KKGMK+LKY++RDKELRRIP+IMMSA+DEV +VVKCLRLGAADYLVKPLRT
Sbjct: 73  ILAEVGLPKKKGMKMLKYIARDKELRRIPIIMMSAQDEVSVVVKCLRLGAADYLVKPLRT 132

Query: 144 NELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFXXXXXXXXXXXXN 203
           NELLNLWTHMWRRRRMLGLAEKN+L+YDFD+V S+PSD NTNSTTLF             
Sbjct: 133 NELLNLWTHMWRRRRMLGLAEKNMLNYDFDLVVSEPSDNNTNSTTLFSDDTDDKSKRSTI 192

Query: 204 PE---AAQQEPEVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFSSGPKKSELRIG 260
            E   + QQE E +I+ AA+V EE      SEC+P+V GI D++T +FSSGPKKSELRIG
Sbjct: 193 QETGISVQQEQESTIANAASV-EEPRDDHASECQPDVHGIDDQQTASFSSGPKKSELRIG 251

Query: 261 --ESSAFFTYVKATTLKSNVQEIAHVDNHATTQVRVEDMNQACARQRVNDLKTHENQEMF 318
             ESSAFFTYVKA+ LK N++ I   DN+A   VR+E M+QACA+Q V+DL+  +N E  
Sbjct: 252 VRESSAFFTYVKASMLKRNLEGIVQADNNAVACVRMEVMHQACAQQGVSDLEVCKNGETC 311

Query: 319 ESRSQEDLPSSNSFPDSFSIERSCTPPASVEVSQQKNFREEYYPQGSL-YPSNGSRGSKL 377
           +S+SQ+D PSSNS PDS SIERS TPPAS+E SQQ  + EE     SL +P  G+  S+L
Sbjct: 312 DSQSQDDFPSSNSIPDSLSIERSGTPPASLEASQQNRYEEENLHHSSLIHPGTGTHCSEL 371

Query: 378 EPSGMPAQH---------------------------AYPYYYNSGVVNHVMLPSSAQLYQ 410
           E S MPAQ+                           AYPYY +SG VNHVM+PSSAQ+YQ
Sbjct: 372 EMSNMPAQNLHHNSLMHPRNGAHCPELERSNMTAQPAYPYYMSSG-VNHVMMPSSAQMYQ 430

Query: 411 KNMQDIHSHANSSMIAQYNHLAQCSPHANGMTSFPYYPMNICLQPGQVSTPHSWPSLGSS 470
           KN+ D+  HA +S+I  YNH+ Q  PH  GM SFPYYPMN+CL PGQ     SWPS G S
Sbjct: 431 KNVYDLQHHAGTSIIGHYNHVPQVGPHTTGMMSFPYYPMNMCLHPGQ-----SWPSYGGS 485

Query: 471 GSCEVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVD 530
            S E  LSK DRREAAL+KF+QK+K+RCFDKKIRYVNRK+LAERRPRVRGQFV KL+GV+
Sbjct: 486 SSSEAKLSKVDRREAALIKFRQKKKERCFDKKIRYVNRKQLAERRPRVRGQFVSKLNGVN 545

Query: 531 VYLNGQPASADYDXXXXXXXDNHVARDSSLEDA 563
           V LNGQP S +YD       D+  ARD S  DA
Sbjct: 546 VDLNGQPPSIEYD---ENEEDDQGARDYSPRDA 575


>Medtr3g037390.2 | timing of cab expression 1/PRR response regulator
           | HC | chr3:13734998-13728441 | 20130731
          Length = 471

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 287/481 (59%), Positives = 339/481 (70%), Gaps = 43/481 (8%)

Query: 116 MSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMV 175
           MSA+DEV +VVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKN+L+YDFD+V
Sbjct: 1   MSAQDEVSVVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLNYDFDLV 60

Query: 176 ASDPSDANTNSTTLFXXXXXXXXXXXXNPE---AAQQEPEVSISKAAAVIEELPGAQISE 232
            S+PSD NTNSTTLF              E   + QQE E +I+ AA+V EE      SE
Sbjct: 61  VSEPSDNNTNSTTLFSDDTDDKSKRSTIQETGISVQQEQESTIANAASV-EEPRDDHASE 119

Query: 233 CRPNVPGISDRRTGNFSSGPKKSELRIG--ESSAFFTYVKATTLKSNVQEIAHVDNHATT 290
           C+P+V GI D++T +FSSGPKKSELRIG  ESSAFFTYVKA+ LK N++ I   DN+A  
Sbjct: 120 CQPDVHGIDDQQTASFSSGPKKSELRIGVRESSAFFTYVKASMLKRNLEGIVQADNNAVA 179

Query: 291 QVRVEDMNQACARQRVNDLKTHENQEMFESRSQEDLPSSNSFPDSFSIERSCTPPASVEV 350
            VR+E M+QACA+Q V+DL+  +N E  +S+SQ+D PSSNS PDS SIERS TPPAS+E 
Sbjct: 180 CVRMEVMHQACAQQGVSDLEVCKNGETCDSQSQDDFPSSNSIPDSLSIERSGTPPASLEA 239

Query: 351 SQQKNFREEYYPQGSL-YPSNGSRGSKLEPSGMPAQH----------------------- 386
           SQQ  + EE     SL +P  G+  S+LE S MPAQ+                       
Sbjct: 240 SQQNRYEEENLHHSSLIHPGTGTHCSELEMSNMPAQNLHHNSLMHPRNGAHCPELERSNM 299

Query: 387 ----AYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQYNHLAQCSPHANGMT 442
               AYPYY +SG VNHVM+PSSAQ+YQKN+ D+  HA +S+I  YNH+ Q  PH  GM 
Sbjct: 300 TAQPAYPYYMSSG-VNHVMMPSSAQMYQKNVYDLQHHAGTSIIGHYNHVPQVGPHTTGMM 358

Query: 443 SFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALMKFKQKRKDRCFDKK 502
           SFPYYPMN+CL PGQ     SWPS G S S E  LSK DRREAAL+KF+QK+K+RCFDKK
Sbjct: 359 SFPYYPMNMCLHPGQ-----SWPSYGGSSSSEAKLSKVDRREAALIKFRQKKKERCFDKK 413

Query: 503 IRYVNRKRLAERRPRVRGQFVRKLSGVDVYLNGQPASADYDXXXXXXXDNHVARDSSLED 562
           IRYVNRK+LAERRPRVRGQFV KL+GV+V LNGQP S +YD       D+  ARD S  D
Sbjct: 414 IRYVNRKQLAERRPRVRGQFVSKLNGVNVDLNGQPPSIEYD---ENEEDDQGARDYSPRD 470

Query: 563 A 563
           A
Sbjct: 471 A 471


>Medtr4g061360.5 | PRR response regulator | HC |
           chr4:22682971-22690792 | 20130731
          Length = 796

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 79/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +++LL DDD  +   V  LL  C Y+V  V +  Q    L   G +ID++L 
Sbjct: 81  EKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLT 140

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E+ +P   G+ LL  +   K L+ IPVIMMS  D + IV KCL  GAAD+LVKP+R NEL
Sbjct: 141 EIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNEL 200

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 201 KNLWQHVWRR 210



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 42/44 (95%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 526
           REAAL KF+QKRK+RCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764


>Medtr4g061360.1 | PRR response regulator | HC |
           chr4:22682971-22690792 | 20130731
          Length = 796

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 79/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +++LL DDD  +   V  LL  C Y+V  V +  Q    L   G +ID++L 
Sbjct: 81  EKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLT 140

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E+ +P   G+ LL  +   K L+ IPVIMMS  D + IV KCL  GAAD+LVKP+R NEL
Sbjct: 141 EIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNEL 200

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 201 KNLWQHVWRR 210



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 42/44 (95%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 526
           REAAL KF+QKRK+RCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764


>Medtr4g061360.2 | PRR response regulator | HC |
           chr4:22682971-22690792 | 20130731
          Length = 796

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 79/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +++LL DDD  +   V  LL  C Y+V  V +  Q    L   G +ID++L 
Sbjct: 81  EKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLT 140

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E+ +P   G+ LL  +   K L+ IPVIMMS  D + IV KCL  GAAD+LVKP+R NEL
Sbjct: 141 EIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNEL 200

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 201 KNLWQHVWRR 210



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 42/44 (95%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 526
           REAAL KF+QKRK+RCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764


>Medtr4g061360.3 | PRR response regulator | HC |
           chr4:22682971-22690792 | 20130731
          Length = 796

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 79/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +++LL DDD  +   V  LL  C Y+V  V +  Q    L   G +ID++L 
Sbjct: 81  EKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLT 140

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E+ +P   G+ LL  +   K L+ IPVIMMS  D + IV KCL  GAAD+LVKP+R NEL
Sbjct: 141 EIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNEL 200

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 201 KNLWQHVWRR 210



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 42/44 (95%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 526
           REAAL KF+QKRK+RCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764


>Medtr4g061360.4 | PRR response regulator | HC |
           chr4:22682971-22690791 | 20130731
          Length = 796

 Score =  129 bits (323), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 79/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +++LL DDD  +   V  LL  C Y+V  V +  Q    L   G +ID++L 
Sbjct: 81  EKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLT 140

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E+ +P   G+ LL  +   K L+ IPVIMMS  D + IV KCL  GAAD+LVKP+R NEL
Sbjct: 141 EIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNEL 200

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 201 KNLWQHVWRR 210



 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 42/44 (95%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKL 526
           REAAL KF+QKRK+RCFDKK+RY +RK+LA++RPRVRGQFV+++
Sbjct: 721 REAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQI 764


>Medtr3g092780.3 | PRR response regulator | HC |
           chr3:42411881-42416018 | 20130731
          Length = 643

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 148/328 (45%), Gaps = 42/328 (12%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+ +  +R+LL + D  + + +  LL KC+Y+V  V    +  + L    + ID+IL 
Sbjct: 48  EKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILT 107

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IPVIMMS++D V  V KC+  GAADYLVKP+R NEL
Sbjct: 108 EVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINEL 167

Query: 147 LNLWTHMWRRRRMLGLAEKNILSYDFDMVASDPSDANTNSTTLFXXXXXXXXXXXXNPEA 206
            NLW H+WRR+     A  N            P D +                     +A
Sbjct: 168 RNLWQHVWRRQTSAATAGIN-----------GPQDESDTQQKFEATAENNAASNRSGGDA 216

Query: 207 AQQEPEVSISKAAAVIEELPGAQISECRPNVPGISDRRTGNFSSGPKKSELRIGESSAFF 266
           A       I +   +IE+   AQ S  RPN+    +  +G   +  + S+L+  E  A+ 
Sbjct: 217 A------CIQRNKDLIEKGSDAQSSCTRPNM----EAESGLVDNMHEFSQLKCAE--AYP 264

Query: 267 TYVKATTLKSNV-QEIAHVDNHATTQVRVEDMNQACARQR--------VNDLKTHENQEM 317
           + +K   L  ++ Q +   D+HA   + V + N   A            N+ K  ++QE 
Sbjct: 265 SEIKTRELDIHLGQAVIAQDSHAGG-LSVANCNNGVASTNNCKNGETGANNCKDGDDQEH 323

Query: 318 FESRS---------QEDLPSSNSFPDSF 336
           F + S         Q DL   +S P +F
Sbjct: 324 FRNASISGKFDHSPQLDLSLRSSHPSNF 351



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 42/47 (89%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           +A  REAAL KF+ KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+
Sbjct: 585 RAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 631


>Medtr3g092780.1 | PRR response regulator | HC |
           chr3:42411882-42416036 | 20130731
          Length = 685

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 80/131 (61%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+ +  +R+LL + D  + + +  LL KC+Y+V  V    +  + L    + ID+IL 
Sbjct: 48  EKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILT 107

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IPVIMMS++D V  V KC+  GAADYLVKP+R NEL
Sbjct: 108 EVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINEL 167

Query: 147 LNLWTHMWRRR 157
            NLW H+WRR+
Sbjct: 168 RNLWQHVWRRQ 178



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 42/47 (89%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           +A  REAAL KF+ KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+
Sbjct: 627 RAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 673


>Medtr3g092780.2 | PRR response regulator | HC |
           chr3:42411881-42416018 | 20130731
          Length = 684

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 82/140 (58%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+ +  +R+LL + D  + + +  LL KC+Y+V  V    +  + L    + ID+IL 
Sbjct: 48  EKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILT 107

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IPVIMMS++D V  V KC+  GAADYLVKP+R NEL
Sbjct: 108 EVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINEL 167

Query: 147 LNLWTHMWRRRRMLGLAEKN 166
            NLW H+WRR+     A  N
Sbjct: 168 RNLWQHVWRRQTSAATAGIN 187



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 42/47 (89%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           +A  REAAL KF+ KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+
Sbjct: 626 RAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 672


>Medtr3g092780.4 | PRR response regulator | HC |
           chr3:42411907-42416036 | 20130731
          Length = 644

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 80/131 (61%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+ +  +R+LL + D  + + +  LL KC+Y+V  V    +  + L    + ID+IL 
Sbjct: 48  EKFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPRSIDLILT 107

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IPVIMMS++D V  V KC+  GAADYLVKP+R NEL
Sbjct: 108 EVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYLVKPIRINEL 167

Query: 147 LNLWTHMWRRR 157
            NLW H+WRR+
Sbjct: 168 RNLWQHVWRRQ 178



 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 42/47 (89%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           +A  REAAL KF+ KRK+RC++KK+RY +RK+LAE+RPRV+GQFVR+
Sbjct: 586 RAMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQ 632


>Medtr3g037400.1 | methyl-CpG-binding domain protein | LC |
           chr3:13743971-13738378 | 20130731
          Length = 385

 Score =  116 bits (290), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 81/113 (71%), Gaps = 7/113 (6%)

Query: 44  PKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLS 103
           P   EEV   L++C +Q    +SA  +IDALNAEG++ID+ILA+V LP KKGM++ KY++
Sbjct: 140 PIPPEEVVAFLLRCCFQA---KSASHLIDALNAEGEHIDVILAKVGLP-KKGMRVFKYMA 195

Query: 104 RDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVK--PLRTNEL-LNLWTHM 153
           RDKEL RIP+IMMS +D V +VVKCL  GA DYLV+  P+   E+ L L  H+
Sbjct: 196 RDKELCRIPIIMMSTQDVVSVVVKCLGFGAVDYLVQVCPIINKEIFLKLCKHL 248


>Medtr7g118260.1 | PRR response regulator | HC |
           chr7:49081893-49086030 | 20130731
          Length = 596

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 75/130 (57%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +R+LL + D  +   +  LL  C Y+V  VR   +  + L  +   ID++L 
Sbjct: 6   NKFVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLT 65

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IP+IMMS++D V  V K +  GA D+L+KP+R NEL
Sbjct: 66  EVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNEL 125

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 126 RNLWQHVWRR 135



 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSG 528
           +  +REAAL KF+ KRKDRC+DKK+RY +RKR AE RPRV+GQFVR++ G
Sbjct: 537 RTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQG 586


>Medtr7g118260.2 | PRR response regulator | HC |
           chr7:49081784-49086030 | 20130731
          Length = 559

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 75/130 (57%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+  + +R+LL + D  +   +  LL  C Y+V  VR   +  + L  +   ID++L 
Sbjct: 6   NKFVPPTMLRVLLVEPDDSTRHIISALLRNCGYKVAAVRDGLKAWETLKNKSLDIDLVLT 65

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           EVDLP   G  LL  +      + IP+IMMS++D V  V K +  GA D+L+KP+R NEL
Sbjct: 66  EVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPVRRNEL 125

Query: 147 LNLWTHMWRR 156
            NLW H+WRR
Sbjct: 126 RNLWQHVWRR 135



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSG 528
           +  +REAAL KF+ KRKDRC+DKK+RY +RKR AE RPRV+GQFVR++ G
Sbjct: 500 RTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQG 549


>Medtr8g024260.1 | PRR response regulator | LC |
           chr8:8900931-8895233 | 20130731
          Length = 640

 Score =  110 bits (275), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 78/130 (60%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           + F+ R  V +LL + D  +   + +LL  C Y+V  V +  +  + +  +   +D++L 
Sbjct: 28  EMFLPRKNVTVLLVESDRATRRLITSLLNNCHYKVIAVSNGSKAWEMMKMKAIDVDLVLT 87

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           E++LP   G  LL  +   +  R IPVIMMS++D    V+KC+  GAAD+L+KP+R NEL
Sbjct: 88  EMELPAISGFALLSLIMEHEIGRNIPVIMMSSRDSRSTVMKCMCRGAADFLIKPVRKNEL 147

Query: 147 LNLWTHMWRR 156
            NLW H+WR+
Sbjct: 148 TNLWQHVWRK 157



 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 3/60 (5%)

Query: 474 EVNLSKADR---REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVD 530
           E  LS + R   REAAL KF+ KRK+RCF+KK+RY +RK+ AE+R RV+GQFVRK+   D
Sbjct: 572 EFRLSDSHRSRQREAALTKFRLKRKERCFEKKVRYQSRKKQAEQRLRVKGQFVRKVQNDD 631


>Medtr1g067110.5 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28880941 | 20130731
          Length = 731

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206


>Medtr1g067110.3 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28880941 | 20130731
          Length = 731

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206


>Medtr1g067110.4 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28881239 | 20130731
          Length = 748

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 19/162 (11%)

Query: 385 QHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQ 433
            H Y  + N   + H + P       K M  +  H  SS + +            N  A 
Sbjct: 577 HHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSAS 636

Query: 434 CSPHA-NGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALM 488
            S H  NG     T+      NI    G      S  + G+     V+ SK  +REAAL+
Sbjct: 637 GSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALI 696

Query: 489 KFKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           KF+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 697 KFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 738


>Medtr1g067110.1 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28881239 | 20130731
          Length = 748

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 19/162 (11%)

Query: 385 QHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQ 433
            H Y  + N   + H + P       K M  +  H  SS + +            N  A 
Sbjct: 577 HHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSAS 636

Query: 434 CSPHA-NGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALM 488
            S H  NG     T+      NI    G      S  + G+     V+ SK  +REAAL+
Sbjct: 637 GSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALI 696

Query: 489 KFKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           KF+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 697 KFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 738


>Medtr1g067110.2 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28881239 | 20130731
          Length = 748

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 19/162 (11%)

Query: 385 QHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQ 433
            H Y  + N   + H + P       K M  +  H  SS + +            N  A 
Sbjct: 577 HHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSAS 636

Query: 434 CSPHA-NGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALM 488
            S H  NG     T+      NI    G      S  + G+     V+ SK  +REAAL+
Sbjct: 637 GSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALI 696

Query: 489 KFKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           KF+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 697 KFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 738


>Medtr1g067110.6 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28881239 | 20130731
          Length = 748

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 19/162 (11%)

Query: 385 QHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQ 433
            H Y  + N   + H + P       K M  +  H  SS + +            N  A 
Sbjct: 577 HHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSAS 636

Query: 434 CSPHA-NGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALM 488
            S H  NG     T+      NI    G      S  + G+     V+ SK  +REAAL+
Sbjct: 637 GSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALI 696

Query: 489 KFKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           KF+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 697 KFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 738


>Medtr1g067110.7 | two-component response regulator-like APRR7
           protein | HC | chr1:28871221-28881239 | 20130731
          Length = 748

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 73/128 (57%)

Query: 29  FIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEV 88
           F+    +++LL + D  +   V  LL  CSY+V    +  Q    L     +ID+IL EV
Sbjct: 79  FLHIRSLKVLLVEYDDCTRHIVTALLRNCSYEVIEAANGLQAWKVLEDLTNHIDLILTEV 138

Query: 89  DLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLN 148
            +P   G+ LL  +      + +PVIMMS+ D + +V KCL  GA D+LVKP+R NEL N
Sbjct: 139 AMPGLSGIALLYKIMGHPTRKNVPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKN 198

Query: 149 LWTHMWRR 156
           LW H+WRR
Sbjct: 199 LWQHVWRR 206



 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 77/162 (47%), Gaps = 19/162 (11%)

Query: 385 QHAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQ 433
            H Y  + N   + H + P       K M  +  H  SS + +            N  A 
Sbjct: 577 HHHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSAS 636

Query: 434 CSPHA-NGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALM 488
            S H  NG     T+      NI    G      S  + G+     V+ SK  +REAAL+
Sbjct: 637 GSNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALI 696

Query: 489 KFKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           KF+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 697 KFRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 738


>Medtr3g086100.1 | two-component response regulator ARR2-like
           protein | HC | chr3:38954988-38950711 | 20130731
          Length = 570

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 3/123 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L+ DDDP   + +  +L KC+Y+VT    AR  +  L       DI++++V++P   
Sbjct: 17  LRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMD 76

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+++  + +L   PVIMMS   E   V+K ++ GA DYL+KP+R  EL N+W H++
Sbjct: 77  GFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVF 133

Query: 155 RRR 157
           R+R
Sbjct: 134 RKR 136


>Medtr2g034960.1 | B-type response regulator | HC |
           chr2:13431340-13428260 | 20130731
          Length = 606

 Score = 96.3 bits (238), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 5/138 (3%)

Query: 23  SKSGDAFIDR--SKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY 80
           S SG+   D+  + +R+L+ DDDP     +  +L  C Y+VT  + A   +  L      
Sbjct: 19  SNSGNLVSDQFPAGLRVLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLLRENKNG 78

Query: 81  IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKP 140
            DI+L++V +P   G KLL+++  + +L   PVIMMSA D   +V+K +  GA DYL+KP
Sbjct: 79  FDIVLSDVHMPDMDGFKLLEHIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKP 135

Query: 141 LRTNELLNLWTHMWRRRR 158
           +R   L N+W H+ R+R+
Sbjct: 136 VRIEALKNIWQHVVRKRK 153


>Medtr3g106220.1 | two-component response regulator ARR12-like
           protein | HC | chr3:49062704-49057734 | 20130731
          Length = 645

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 25  SGDAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDII 84
           SGD F     +R+L  DDDP     + TLL +C Y VT    A   +  L       D++
Sbjct: 4   SGDRF--PIGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLV 61

Query: 85  LAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTN 144
           +++V +P   G KLL+ +  + +L   PVIM+SA  +  +V+K +  GA DYL+KP+R  
Sbjct: 62  ISDVHMPDMDGFKLLELVGLEMDL---PVIMLSAYGDTKLVMKGISHGACDYLLKPVRLE 118

Query: 145 ELLNLWTHMWRRRR 158
           EL N+W H+ R+++
Sbjct: 119 ELKNIWQHVIRKKK 132


>Medtr4g121020.1 | two-component response regulator ARR2-like
           protein | HC | chr4:50105844-50109980 | 20130731
          Length = 681

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L+ DDDP     +  +L  C Y+VT    A   +  L       DI++++V +P   
Sbjct: 35  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMD 94

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+++  + +L   PVIMMSA D   +V+K +  GA DYL+KP+R   L N+W H+ 
Sbjct: 95  GFKLLEHIGLEMDL---PVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 151

Query: 155 RRRR 158
           R+++
Sbjct: 152 RKKK 155


>Medtr4g121020.3 | two-component response regulator ARR2-like
           protein | HC | chr4:50105754-50110170 | 20130731
          Length = 680

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L+ DDDP     +  +L  C Y+VT    A   +  L       DI++++V +P   
Sbjct: 35  LRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMD 94

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+++  + +L   PVIMMSA D   +V+K +  GA DYL+KP+R   L N+W H+ 
Sbjct: 95  GFKLLEHIGLEMDL---PVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 151

Query: 155 RRRR 158
           R+++
Sbjct: 152 RKKK 155


>Medtr2g450070.2 | two-component response regulator ARR12-like
           protein | HC | chr2:22084494-22087644 | 20130731
          Length = 666

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 5/138 (3%)

Query: 23  SKSGDAFIDRSKV--RILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY 80
           S+  D  IDR  V  R+L  DD+P   + +  LL +C Y VT   +    +  L    + 
Sbjct: 8   SRDEDGVIDRFPVGMRVLAVDDNPTCLKVLAKLLSECKYHVTTATNGFDGLKMLRENRKN 67

Query: 81  IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKP 140
            D+++++V +P   G KLL+ +  + +L   PVIM+S   +  +V K +  GA DYLVKP
Sbjct: 68  FDLVISDVAMPDMDGFKLLELVGLEMDL---PVIMLSGYSDTSMVFKGVTHGACDYLVKP 124

Query: 141 LRTNELLNLWTHMWRRRR 158
           +R  EL N+W H+ R+++
Sbjct: 125 VRLEELRNIWQHVVRKKK 142


>Medtr2g450070.1 | two-component response regulator ARR12-like
           protein | HC | chr2:22084494-22088472 | 20130731
          Length = 688

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 5/138 (3%)

Query: 23  SKSGDAFIDRSKV--RILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY 80
           S+  D  IDR  V  R+L  DD+P   + +  LL +C Y VT   +    +  L    + 
Sbjct: 8   SRDEDGVIDRFPVGMRVLAVDDNPTCLKVLAKLLSECKYHVTTATNGFDGLKMLRENRKN 67

Query: 81  IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKP 140
            D+++++V +P   G KLL+ +  + +L   PVIM+S   +  +V K +  GA DYLVKP
Sbjct: 68  FDLVISDVAMPDMDGFKLLELVGLEMDL---PVIMLSGYSDTSMVFKGVTHGACDYLVKP 124

Query: 141 LRTNELLNLWTHMWRRRR 158
           +R  EL N+W H+ R+++
Sbjct: 125 VRLEELRNIWQHVVRKKK 142


>Medtr2g450070.3 | two-component response regulator ARR12-like
           protein | HC | chr2:22084494-22088472 | 20130731
          Length = 688

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 5/138 (3%)

Query: 23  SKSGDAFIDRSKV--RILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY 80
           S+  D  IDR  V  R+L  DD+P   + +  LL +C Y VT   +    +  L    + 
Sbjct: 8   SRDEDGVIDRFPVGMRVLAVDDNPTCLKVLAKLLSECKYHVTTATNGFDGLKMLRENRKN 67

Query: 81  IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKP 140
            D+++++V +P   G KLL+ +  + +L   PVIM+S   +  +V K +  GA DYLVKP
Sbjct: 68  FDLVISDVAMPDMDGFKLLELVGLEMDL---PVIMLSGYSDTSMVFKGVTHGACDYLVKP 124

Query: 141 LRTNELLNLWTHMWRRRR 158
           +R  EL N+W H+ R+++
Sbjct: 125 VRLEELRNIWQHVVRKKK 142


>Medtr1g032570.1 | B-type response regulator | HC |
           chr1:11594538-11602346 | 20130731
          Length = 626

 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L+ DDD  + + +  + ++C YQVT    A   +  L       D++L++V +P   
Sbjct: 15  LRVLVVDDDVTTLKIIEQMSLRCHYQVTTCSEATVALKILRERKGCFDVVLSDVHMPDMD 74

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+++  + +L   PVIMMS  D    V+K +R GA D+ +KP+R  EL N+W H+ 
Sbjct: 75  GYKLLEHVGLEMDL---PVIMMSVDDRTSTVMKGIRHGACDFFIKPVRMEELRNIWQHVA 131

Query: 155 RR 156
           R+
Sbjct: 132 RK 133


>Medtr3g102600.1 | two-component response regulator | HC |
           chr3:47281686-47279838 | 20130731
          Length = 228

 Score = 89.7 bits (221), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 5/133 (3%)

Query: 27  DAFIDRSKV--RILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDII 84
           D F DR  +  R+L  DDDP S   + TLL  C Y VT    A   +  L       D++
Sbjct: 2   DDFSDRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLV 61

Query: 85  LAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTN 144
           +AEV +P   G+KLL+ +  + +L   PVIM+SA  E  +V+K +  GA D+L+KP+R  
Sbjct: 62  IAEVHMPDMDGLKLLELVGLEMDL---PVIMLSAHGETELVMKAISHGARDFLLKPVRLE 118

Query: 145 ELLNLWTHMWRRR 157
           EL N+W H+ R +
Sbjct: 119 ELRNIWQHVIRNK 131


>Medtr3g102600.2 | two-component response regulator | HC |
           chr3:47281686-47279838 | 20130731
          Length = 189

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 75/133 (56%), Gaps = 5/133 (3%)

Query: 27  DAFIDRSKV--RILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDII 84
           D F DR  +  R+L  DDDP S   + TLL  C Y VT    A   +  L       D++
Sbjct: 2   DDFSDRFPIGMRVLAVDDDPTSLLLLETLLRSCQYHVTTTSEAITALTMLQENIDMFDLV 61

Query: 85  LAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTN 144
           +AEV +P   G+KLL+ +  + +L   PVIM+SA  E  +V+K +  GA D+L+KP+R  
Sbjct: 62  IAEVHMPDMDGLKLLELVGLEMDL---PVIMLSAHGETELVMKAISHGARDFLLKPVRLE 118

Query: 145 ELLNLWTHMWRRR 157
           EL N+W H+ R +
Sbjct: 119 ELRNIWQHVIRNK 131


>Medtr8g079940.1 | two-component response regulator ARR2-like
           protein | HC | chr8:34314993-34318731 | 20130731
          Length = 538

 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 5/131 (3%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILA 86
           DAF   + +R+L+ DDD      +  +L KC Y+VT    A + +  L       DI+++
Sbjct: 23  DAF--PAGLRVLVVDDDLTCLRILEKMLKKCFYRVTTCCLAIEALKKLRESKGTYDIVIS 80

Query: 87  EVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNEL 146
           +V++P   G KLL+++  + +L   PVIMMS   E   V+K ++ GA DYL+KP+R  E+
Sbjct: 81  DVNMPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKEV 137

Query: 147 LNLWTHMWRRR 157
            N+W H+ R+R
Sbjct: 138 RNIWQHVLRKR 148


>Medtr4g131580.1 | two-component response regulator ARR12-like
           protein | HC | chr4:54896152-54892823 | 20130731
          Length = 607

 Score = 86.7 bits (213), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 72/123 (58%), Gaps = 3/123 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  DDD  S + +   L+ C Y VT    + + ++ L  +    D+I+++V++P   
Sbjct: 21  MRVLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELLREKRSMFDLIISDVNMPEMD 80

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   P IM+S  D+   V+K +  GA DYLVKP+R  EL N+W H+ 
Sbjct: 81  GFKLLEQVGLEMDL---PFIMLSGHDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137

Query: 155 RRR 157
           R++
Sbjct: 138 RKK 140


>Medtr1g013170.1 | response regulator | HC | chr1:2892386-2894964 |
           20130731
          Length = 497

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  DDD    + +  LL +C Y VT  ++A   ++ L       D++++ V +P   
Sbjct: 9   MRVLAVDDDRTCLKILEKLLQRCQYHVTTAQNAITALNLLRENKSNFDLVISNVHMPDMD 68

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   PVIM SA D+  +V+K +  GA DYL+KP+R  E+  +W H+ 
Sbjct: 69  GFKLLELVGLEMDL---PVIMFSANDDPKMVMKGIEHGACDYLLKPVRLKEVQIIWQHVI 125

Query: 155 RRRR 158
           R+++
Sbjct: 126 RKKK 129


>Medtr4g131600.1 | two-component response regulator ARR12-like
           protein | HC | chr4:54907419-54903540 | 20130731
          Length = 590

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 3/123 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  DDDP   + +   L+ C+Y VT      + ++ L  +    D+++++V +P   
Sbjct: 24  MRVLAVDDDPTYLKVLEKQLLTCNYNVTTTTKPVEALELLREKKDMFDLVISDVSMPDMD 83

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   P IM+S  D++  V+K +  GA +YLVKP+R  EL ++W H+ 
Sbjct: 84  GFKLLEQVGLEMDL---PFIMLSVNDDIEKVMKSVIHGACNYLVKPIRMEELKSIWQHVV 140

Query: 155 RRR 157
           R++
Sbjct: 141 RKK 143


>Medtr4g131570.1 | two-component response regulator ARR12-like
           protein | HC | chr4:54890839-54887406 | 20130731
          Length = 596

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 12/158 (7%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  DDD    + +   L+ C Y VT      + ++ L  +    D+++++V +P   
Sbjct: 21  MRVLAVDDDQTCLKLLEKFLLMCKYNVTTTTKPVEALELLREKRDMFDLVISDVSMPEMD 80

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   P IM+S  D+   V+K +  GA DYLVKP+R  EL N+W H+ 
Sbjct: 81  GFKLLEQVGLEIDL---PFIMLSGNDDRERVMKGVMKGACDYLVKPIRLEELKNIWQHVV 137

Query: 155 RRR-----RMLGLAEKNILSYDFDMVASDPSDANTNST 187
           R++     R  G+    I S D     S  + AN N T
Sbjct: 138 RKKIESKDRNKGIITDGICSQD----TSSENIANRNKT 171


>Medtr1g013180.1 | response regulator | LC | chr1:2902323-2906821 |
           20130731
          Length = 681

 Score = 82.8 bits (203), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 3/124 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  DDD    + +  LL +C Y VT  +SA   ++ L       D++++ V +P   
Sbjct: 160 MRVLAVDDDRTCLKILERLLQRCQYHVTTAQSALTALNLLRENKSNFDLVISNVHMPDMD 219

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   PVIM SA D+  +V+K +  GA DYL+KP+   E+  +W H+ 
Sbjct: 220 GFKLLELVGLEMDL---PVIMFSANDDPKMVMKGIDHGACDYLLKPVTLKEVQMIWQHVV 276

Query: 155 RRRR 158
           R+++
Sbjct: 277 RKKK 280


>Medtr7g117705.1 | response regulator | HC | chr7:48871635-48867985
           | 20130731
          Length = 461

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 8/158 (5%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY-IDIILAEVDLPIK 93
           +R+L  DDD    + +  LL +C Y VT  +SAR  ++ L  E +   D++++ V +P  
Sbjct: 9   MRVLAVDDDRTCLKVLERLLQRCQYHVTTAQSARTALNLLLRENKNNFDLVISNVHMPDM 68

Query: 94  KGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
            G KLL+ +  + +L   PVI+ SA D+  +V+K +  GA DYL+KP+   E+  +W H+
Sbjct: 69  DGFKLLELVGLEMDL---PVIVFSANDDPRMVMKGIDHGACDYLLKPVTLKEVQMIWQHV 125

Query: 154 WRRRRMLGLAEKNILSYD----FDMVASDPSDANTNST 187
            R+++    +  ++ ++D     D   +  SD N   T
Sbjct: 126 IRKKKTSKRSNHDVPNFDSGNVIDSAVTRNSDQNEKPT 163


>Medtr7g118260.3 | PRR response regulator | HC |
           chr7:49081893-49086030 | 20130731
          Length = 510

 Score = 79.3 bits (194), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSG 528
           +  +REAAL KF+ KRKDRC+DKK+RY +RKR AE RPRV+GQFVR++ G
Sbjct: 451 RTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQG 500


>Medtr7g118260.4 | PRR response regulator | HC |
           chr7:49081893-49086030 | 20130731
          Length = 426

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 42/50 (84%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSG 528
           +  +REAAL KF+ KRKDRC+DKK+RY +RKR AE RPRV+GQFVR++ G
Sbjct: 367 RTSQREAALTKFRLKRKDRCYDKKVRYESRKRQAENRPRVKGQFVRQVQG 416


>Medtr1g067110.8 | two-component response regulator-like APRR7
           protein | HC | chr1:28873787-28881239 | 20130731
          Length = 583

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 19/161 (11%)

Query: 386 HAYPYYYNSGVVNHVMLPSSAQLYQKNMQDIHSHANSSMIAQ-----------YNHLAQC 434
           H Y  + N   + H + P       K M  +  H  SS + +            N  A  
Sbjct: 413 HHYENHSNVANMQHQLPPEHDAESSKEMTVVAPHCGSSNMVKGPVEGNTGNYSINRSASG 472

Query: 435 SPH-ANGM----TSFPYYPMNICLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALMK 489
           S H +NG     T+      NI    G      S  + G+     V+ SK  +REAAL+K
Sbjct: 473 SNHGSNGQNGSSTAINAGGTNIDNNNGLAGNSGSGDASGNGSGNRVDQSKNFQREAALIK 532

Query: 490 FKQKRKDR---CFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           F+QKRK+R   CF K++RY +R++LAE+RPR RGQFVR+ S
Sbjct: 533 FRQKRKERKERCFHKQVRYQSRQKLAEQRPRYRGQFVRQSS 573



 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 31/41 (75%)

Query: 116 MSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 156
           MS+ D + +V KCL  GA D+LVKP+R NEL NLW H+WRR
Sbjct: 1   MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 41


>Medtr3g102600.4 | two-component response regulator | HC |
           chr3:47281686-47279838 | 20130731
          Length = 140

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 3/76 (3%)

Query: 82  DIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPL 141
           D+++AEV +P   G+KLL+ +  + +L   PVIM+SA  E  +V+K +  GA D+L+KP+
Sbjct: 10  DLVIAEVHMPDMDGLKLLELVGLEMDL---PVIMLSAHGETELVMKAISHGARDFLLKPV 66

Query: 142 RTNELLNLWTHMWRRR 157
           R  EL N+W H+ R +
Sbjct: 67  RLEELRNIWQHVIRNK 82


>Medtr3g102600.3 | two-component response regulator | HC |
           chr3:47281686-47279838 | 20130731
          Length = 179

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 51/76 (67%), Gaps = 3/76 (3%)

Query: 82  DIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPL 141
           D+++AEV +P   G+KLL+ +  + +L   PVIM+SA  E  +V+K +  GA D+L+KP+
Sbjct: 10  DLVIAEVHMPDMDGLKLLELVGLEMDL---PVIMLSAHGETELVMKAISHGARDFLLKPV 66

Query: 142 RTNELLNLWTHMWRRR 157
           R  EL N+W H+ R +
Sbjct: 67  RLEELRNIWQHVIRNK 82


>Medtr5g014040.1 | two-component response regulator-APRR2-like
           protein | HC | chr5:4640114-4646190 | 20130731
          Length = 543

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+LL + D  S+ E+ T L    Y V+   +  + + A+++  +   + + EV +    
Sbjct: 18  LRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSISCPD 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    K+L   K+L   P IM S    +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FKFLENAKDL---PTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQHV 131


>Medtr5g014040.3 | two-component response regulator-APRR2-like
           protein | HC | chr5:4639921-4646290 | 20130731
          Length = 543

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+LL + D  S+ E+ T L    Y V+   +  + + A+++  +   + + EV +    
Sbjct: 18  LRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSISCPD 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    K+L   K+L   P IM S    +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FKFLENAKDL---PTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQHV 131


>Medtr5g014040.2 | two-component response regulator-APRR2-like
           protein | HC | chr5:4640114-4646035 | 20130731
          Length = 548

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+LL + D  S+ E+ T L    Y V+   +  + + A+++  +   + + EV +    
Sbjct: 18  LRVLLLEGDNNSASEIRTKLESMDYNVSTFYNENEALSAISSSPKCFHVAIVEVSISCPD 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    K+L   K+L   P IM S    +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FKFLENAKDL---PTIMTSNSQCINTMMKCIALGAVEFLTKPLSEDKLKNIWQHV 131


>Medtr3g086100.2 | two-component response regulator ARR2-like
           protein | HC | chr3:38954988-38950711 | 20130731
          Length = 499

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 3/68 (4%)

Query: 90  LPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNL 149
           +P   G KLL+++  + +L   PVIMMS   E   V+K ++ GA DYL+KP+R  EL N+
Sbjct: 1   MPDMDGFKLLEHVGLEMDL---PVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNI 57

Query: 150 WTHMWRRR 157
           W H++R+R
Sbjct: 58  WQHVFRKR 65


>Medtr3g102590.1 | two-component response regulator | HC |
           chr3:47276194-47274221 | 20130731
          Length = 240

 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  D D     ++ T L  C Y VT    A+  +  L       D+++A+V LP   
Sbjct: 12  MRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLPDMD 71

Query: 95  GMKLLKYLSRDKELRRIP-VIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G+   K L   +    +P V+M+S   +  +V+K +  GA+D+LVKP+R  EL  +W H+
Sbjct: 72  GL---KLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQHV 128

Query: 154 WRRRR 158
            R+++
Sbjct: 129 IRKKK 133


>Medtr1g032570.3 | B-type response regulator | HC |
           chr1:11594556-11602346 | 20130731
          Length = 557

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 90  LPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNL 149
           +P   G KLL+++  + +L   PVIMMS  D    V+K +R GA D+ +KP+R  EL N+
Sbjct: 1   MPDMDGYKLLEHVGLEMDL---PVIMMSVDDRTSTVMKGIRHGACDFFIKPVRMEELRNI 57

Query: 150 WTHMWRR 156
           W H+ R+
Sbjct: 58  WQHVARK 64


>Medtr1g032570.2 | B-type response regulator | HC |
           chr1:11594538-11602346 | 20130731
          Length = 557

 Score = 62.8 bits (151), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 90  LPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNL 149
           +P   G KLL+++  + +L   PVIMMS  D    V+K +R GA D+ +KP+R  EL N+
Sbjct: 1   MPDMDGYKLLEHVGLEMDL---PVIMMSVDDRTSTVMKGIRHGACDFFIKPVRMEELRNI 57

Query: 150 WTHMWRR 156
           W H+ R+
Sbjct: 58  WQHVARK 64


>Medtr3g102590.2 | two-component response regulator | HC |
           chr3:47276194-47274221 | 20130731
          Length = 195

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +R+L  D D     ++ T L  C Y VT    A+  +  L       D+++A+V LP   
Sbjct: 12  MRVLAVDGDSTHLSDLETRLRSCQYHVTTTSQAKTALTMLRENKDKFDLVIADVHLPDMD 71

Query: 95  GMKLLKYLSRDKELRRIP-VIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G+   K L   +    +P V+M+S   +  +V+K +  GA+D+LVKP+R  EL  +W H+
Sbjct: 72  GL---KLLELVELETDLPVVVMLSESSDNELVMKAVFHGASDFLVKPVRLQELKTIWQHV 128

Query: 154 WRRRR 158
            R+++
Sbjct: 129 IRKKK 133


>Medtr4g093730.1 | GATA transcription factor | HC |
           chr4:37055500-37051502 | 20130731
          Length = 334

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 478 SKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFV 523
           SK  RR A+L++F++KRK+RCF+KKIRY  RK +AER  R  GQF 
Sbjct: 103 SKVSRRSASLVRFREKRKERCFEKKIRYTCRKEVAERMQRKNGQFA 148


>Medtr7g490310.2 | two-component response regulator ARR3-like
           protein | HC | chr7:35463772-35459164 | 20130731
          Length = 239

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 18/143 (12%)

Query: 33  SKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDAL------------------ 74
           S+  +L  DD     + +  LL   SYQVT V S  + ++ L                  
Sbjct: 7   SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPN 66

Query: 75  NAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAA 134
           N +   +++++ +  +P   G  LLK +     LR IPV++MS+++    + +CL  GA 
Sbjct: 67  NHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAE 126

Query: 135 DYLVKPLRTNELLNLWTHMWRRR 157
           ++ +KP+R ++L  L  HM + +
Sbjct: 127 EFFLKPVRLSDLNRLKPHMKKTK 149


>Medtr7g490310.1 | two-component response regulator ARR3-like
           protein | HC | chr7:35463772-35459164 | 20130731
          Length = 239

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 18/143 (12%)

Query: 33  SKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDAL------------------ 74
           S+  +L  DD     + +  LL   SYQVT V S  + ++ L                  
Sbjct: 7   SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPNTPSVFPN 66

Query: 75  NAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAA 134
           N +   +++++ +  +P   G  LLK +     LR IPV++MS+++    + +CL  GA 
Sbjct: 67  NHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAE 126

Query: 135 DYLVKPLRTNELLNLWTHMWRRR 157
           ++ +KP+R ++L  L  HM + +
Sbjct: 127 EFFLKPVRLSDLNRLKPHMKKTK 149


>Medtr3g100040.1 | GATA transcription factor | HC |
           chr3:45925626-45916495 | 20130731
          Length = 359

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 477 LSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQF--VRKLSGVDVYLN 534
           L    RR A+L+++++KRK+RCFDKKIRY  RK +AER  R +GQF  +++  G   + +
Sbjct: 125 LPNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLKQSPGSSSWNS 184

Query: 535 GQPASAD 541
            Q A  D
Sbjct: 185 AQGAGQD 191


>Medtr3g105710.1 | zinc finger constans-like protein | HC |
           chr3:48758302-48759914 | 20130731
          Length = 290

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 4/75 (5%)

Query: 456 GQVSTPHSWPSLGSSGSCEVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERR 515
           G V   ++ P + + G   V +     REA +M++++KRK+R F+K IRY +RK  AE R
Sbjct: 209 GVVPDANTVPEISNCGYGTVAVD----REARVMRYREKRKNRRFEKTIRYASRKAYAETR 264

Query: 516 PRVRGQFVRKLSGVD 530
           PR++G+F ++   VD
Sbjct: 265 PRIKGRFAKRTDAVD 279


>Medtr0450s0040.1 | response regulator receiver domain protein | LC
           | scaffold0450:6304-9742 | 20130731
          Length = 345

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 31  DRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDL 90
           D+S +++L+ D D +S   +  +L+   Y+V   + A   +  L       D+I++E  +
Sbjct: 4   DKSNIQVLVVDHDDESLASLTNILMTWQYKVQTAKDAHHALATLRDSQILFDLIISEFHI 63

Query: 91  PIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLW 150
               GM   ++  + ++  ++PVI+MS  +   I+   L  GAA Y+VKP    +  ++W
Sbjct: 64  F---GMNGFEFQKQIQDEFQLPVIVMSKDNREDIISMTLEHGAAHYMVKPFCPEDFRDIW 120

Query: 151 TH 152
            +
Sbjct: 121 KY 122


>Medtr3g100040.2 | GATA transcription factor | HC |
           chr3:45923987-45916495 | 20130731
          Length = 255

 Score = 59.7 bits (143), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 477 LSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQF--VRKLSGVDVYLN 534
           L    RR A+L+++++KRK+RCFDKKIRY  RK +AER  R +GQF  +++  G   + +
Sbjct: 21  LPNLSRRIASLVRYREKRKERCFDKKIRYTVRKEVAERMHREKGQFAPLKQSPGSSSWNS 80

Query: 535 GQPASAD 541
            Q A  D
Sbjct: 81  AQGAGQD 87


>Medtr5g066510.1 | GATA transcription factor | HC |
           chr5:28062542-28067446 | 20130731
          Length = 286

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFV--RKLSGVDVYLNGQPASA 540
           REA+L++F+QKRK+RCFDKK+RY  R+ +A R  R +GQF   +K  G +     Q +S 
Sbjct: 135 REASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFTTSKKQDGSNSCGTDQDSSQ 194

Query: 541 D 541
           D
Sbjct: 195 D 195


>Medtr5g066510.2 | GATA transcription factor | HC |
           chr5:28062546-28067424 | 20130731
          Length = 202

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 2/61 (3%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFV--RKLSGVDVYLNGQPASA 540
           REA+L++F+QKRK+RCFDKK+RY  R+ +A R  R +GQF   +K  G +     Q +S 
Sbjct: 135 REASLLRFRQKRKERCFDKKVRYEVRQEVALRMQRKKGQFTTSKKQDGSNSCGTDQDSSQ 194

Query: 541 D 541
           D
Sbjct: 195 D 195


>Medtr3g037450.1 | timing of cab expression 1/PRR response regulator
           1, putative | HC | chr3:13754992-13754057 | 20130731
          Length = 66

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 4/43 (9%)

Query: 116 MSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 158
           MSA+DEV +VVKCL+ GAA YLVKPL   E+LNL    WRRRR
Sbjct: 1   MSAQDEVSVVVKCLKFGAAGYLVKPLPKIEILNL----WRRRR 39


>Medtr5g036480.1 | two-component response regulator ARR3-like
           protein | HC | chr5:15918294-15920037 | 20130731
          Length = 237

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 20/162 (12%)

Query: 30  IDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALN-------------A 76
           +D  +V +L  DD     + +  LL   + +VT V S  + +  L               
Sbjct: 11  VDSQEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFV 70

Query: 77  EGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADY 136
            G  +D+++ +  +P   G +LLK +      R IPV++MS+++ +P + +CL  GA D+
Sbjct: 71  PGLKVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAEDF 130

Query: 137 LVKPLRTNELLNLWTHMWRRRRMLGLAEKNILSYDFDMVASD 178
           +VKP++ +++  L  +M  +       E N+ S D +++ ++
Sbjct: 131 IVKPVKLSDVKRLKGYMTTK-------EVNVGSQDTEVIVTN 165


>Medtr4g106590.1 | two-component response regulator ARR3-like
           protein | HC | chr4:44212854-44214908 | 20130731
          Length = 215

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 73/132 (55%), Gaps = 10/132 (7%)

Query: 34  KVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQ---------YIDII 84
           ++ +L  DD     + +  LL   S +VT V SAR+ +  L  +G+          +++I
Sbjct: 25  ELHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGLDGENSDVAFDAVKVNLI 84

Query: 85  LAEVDLPIKKGMKLLKYLSRDKEL-RRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRT 143
           + +  +P   G +LLK + ++  + R IPV++MS+++ +  + +CL  GA D+L+KP++ 
Sbjct: 85  MTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEDFLLKPVKL 144

Query: 144 NELLNLWTHMWR 155
           +++  L   + R
Sbjct: 145 SDVRRLKDFIMR 156


>Medtr1g013450.1 | zinc finger constans-like protein | HC |
           chr1:3420903-3419850 | 20130731
          Length = 316

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 36/46 (78%)

Query: 480 ADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           A  REA +M++++KRK+R F+K IRY +RK  AE RPR++G+F ++
Sbjct: 252 AVEREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKR 297


>Medtr5g072780.1 | CCT motif protein | HC | chr5:30979956-30981595 |
           20130731
          Length = 217

 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 38/44 (86%)

Query: 482 RREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           RREA+++++K+KR++R F KKIRY  RK  A++RPR++G+FV++
Sbjct: 173 RREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKR 216


>Medtr1g013160.1 | two-component response regulator ARR12-like
           protein | HC | chr1:2888569-2889253 | 20130731
          Length = 159

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 3/64 (4%)

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
           G KLL+ +  + +L   PVIM SA D+  +V+K +  GA DYLVKP+R  E+  +W H+ 
Sbjct: 3   GFKLLELVGLEMDL---PVIMFSANDDPKMVMKGIEHGACDYLVKPVRLKEVQIIWQHVI 59

Query: 155 RRRR 158
           R+++
Sbjct: 60  RKKK 63


>Medtr4g098870.2 | two-component response regulator-APRR2-like
           protein | HC | chr4:40805833-40799452 | 20130731
          Length = 555

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 18  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 131


>Medtr4g128930.1 | zinc finger constans-like protein | HC |
           chr4:53656301-53658369 | 20130731
          Length = 375

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 35/43 (81%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           REA +M++++KRK+R F+K IRY +RK  AE RPR++G+F ++
Sbjct: 298 REARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 340


>Medtr4g098870.4 | two-component response regulator-APRR2-like
           protein | HC | chr4:40805775-40800759 | 20130731
          Length = 560

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 18  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 131


>Medtr4g098870.5 | two-component response regulator-APRR2-like
           protein | HC | chr4:40805775-40800759 | 20130731
          Length = 560

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 18  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 78  GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 131


>Medtr4g098870.3 | two-component response regulator-APRR2-like
           protein | HC | chr4:40805773-40799442 | 20130731
          Length = 575

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 38  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 97

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 98  GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 151


>Medtr4g098870.6 | two-component response regulator-APRR2-like
           protein | HC | chr4:40805152-40800759 | 20130731
          Length = 580

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 38  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 97

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 98  GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 151


>Medtr4g098870.1 | two-component response regulator-APRR2-like
           protein | HC | chr4:40804941-40800372 | 20130731
          Length = 594

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           +++LL + D  S  E+   L    Y V+      + + A+++  +   I + EV     +
Sbjct: 57  LKVLLLEGDNTSVSEIRVKLEAMDYNVSIFCDVNEALSAVSSRPEDFHIAIVEVSSSSCE 116

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHM 153
           G    ++L   K+L   P IM S  D +  ++KC+ LGA ++L KPL  ++L N+W H+
Sbjct: 117 GG--FRFLENAKDL---PTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHV 170


>Medtr7g032240.1 | CCT motif protein | HC | chr7:11334447-11330064 |
           20130731
          Length = 352

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 38/47 (80%)

Query: 479 KADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           K  +REA+L+++K+KR+ R F K+IRY  RK  AE+RPR++G+FV++
Sbjct: 305 KLGQREASLLRYKEKRQSRLFAKRIRYEVRKLNAEKRPRMKGRFVKR 351


>Medtr1g049100.1 | two-component response regulator ARR3-like
           protein | HC | chr1:18957861-18956301 | 20130731
          Length = 197

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 13/144 (9%)

Query: 34  KVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQ-----------YID 82
           +V +L  DD     + +  LL   + +VT V S  + +  L  + Q            +D
Sbjct: 7   EVHVLAVDDSLIDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRENSESDGSPLKVD 66

Query: 83  IILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLR 142
           +++ +  +P   G +LLK +      + IPV++MS+++ +P + +CL  GA D+++KP++
Sbjct: 67  LVITDYCMPEMTGYELLKKIKESSTFKEIPVVIMSSENVLPRIDRCLEEGAKDFIIKPVK 126

Query: 143 TNELLNLWTHMWRRRRMLGLAEKN 166
             ++  L  +M  R   +G+A  N
Sbjct: 127 LCDVKRLKGYMATRE--VGVAINN 148


>Medtr7g026400.1 | response regulator receiver domain protein | LC |
           chr7:8764701-8760736 | 20130731
          Length = 602

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 3/98 (3%)

Query: 61  VTPVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKD 120
           V   + AR  +  L       D+++ E  L    G++  K++   K+  +IP+IMMS  +
Sbjct: 17  VVTAKDARHALITLQENEGLFDLVITEFHLVGMNGLEFQKHI---KDQFQIPIIMMSEDN 73

Query: 121 EVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRR 158
              ++ K L  GAA Y+VKP    +  ++W ++   ++
Sbjct: 74  RPSLISKTLENGAAQYIVKPFCAEDFKDIWKYVMEGKK 111


>Medtr7g018170.1 | zinc finger constans-like protein | HC |
           chr7:5837191-5833561 | 20130731
          Length = 396

 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 34/43 (79%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRK 525
           REA ++++++K+K R F+K IRY +RK  AE RPR++G+F ++
Sbjct: 327 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKR 369


>Medtr1g110870.1 | zinc finger constans-like protein | HC |
           chr1:50056406-50054285 | 20130731
          Length = 436

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 452 CLQPGQVSTPHSWPSLGSSGSCEVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRL 511
           C+        +++   G  G   V +     REA + ++++KR+ R F KKIRY  RK  
Sbjct: 353 CMGTFGTEVHYAYGEFGGYGCHPVMVDGG--REARVSRYREKRRTRLFSKKIRYEVRKLN 410

Query: 512 AERRPRVRGQFVRKLS 527
           AE+RPR++G+FV++ S
Sbjct: 411 AEKRPRMKGRFVKRAS 426


>Medtr3g082630.1 | B-box type zinc finger protein | HC |
           chr3:37275432-37271508 | 20130731
          Length = 411

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 474 EVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVD 530
           E+ L  A+R  +A+M++K+K+K R FDK++RY +RK  A+ R RV+G+FV+     D
Sbjct: 346 ELQLQSANRC-SAVMRYKEKKKTRKFDKRVRYASRKERADVRRRVKGRFVKAGEAYD 401


>Medtr3g082630.2 | B-box type zinc finger protein | HC |
           chr3:37275432-37271508 | 20130731
          Length = 411

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)

Query: 474 EVNLSKADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLSGVD 530
           E+ L  A+R  +A+M++K+K+K R FDK++RY +RK  A+ R RV+G+FV+     D
Sbjct: 346 ELQLQSANRC-SAVMRYKEKKKTRKFDKRVRYASRKERADVRRRVKGRFVKAGEAYD 401


>Medtr2g096080.1 | CCT motif protein | HC | chr2:41011109-41013371 |
           20130731
          Length = 251

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 33/44 (75%)

Query: 481 DRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVR 524
           + ++  + +++ KR  R F+KKI+YV RK LA+RRPR+RG+F R
Sbjct: 153 EEKKVRIERYRIKRNQRNFNKKIKYVCRKTLADRRPRIRGRFAR 196


>Medtr8g093040.1 | response regulator receiver domain protein | LC |
           chr8:38881068-38879925 | 20130731
          Length = 274

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 35  VRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKK 94
           + +L+ D D         + + C+YQVT    A      L      +D++L E  +P   
Sbjct: 18  LNVLVVDHDTDVLNAAVEMSIPCNYQVTTCSKASFAFKLLTETKGCVDVVLIEAQMPDMD 77

Query: 95  GMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMW 154
               ++++++      I VIMM        V+K +  GA ++ +KP   N++ N+W  + 
Sbjct: 78  SYDFVRHVTQQ---INISVIMMCDDGSTNAVMKAVTNGACEFWIKPFIENQIKNMWQCVA 134

Query: 155 RR 156
           R+
Sbjct: 135 RK 136


>Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-16923253 |
           20130731
          Length = 230

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 24/92 (26%)

Query: 457 QVSTPHSWPSLGS--------SGSCEVNLS----------------KADRREAALMKFKQ 492
           QV  P  + +LG+        +GSC   L+                  ++R+  + ++ +
Sbjct: 84  QVFNPQDFQALGNENHKLVSGAGSCSATLAPEISHLEDSSLKVGKLSVEQRKEKIHRYMK 143

Query: 493 KRKDRCFDKKIRYVNRKRLAERRPRVRGQFVR 524
           KR +R F KKI+Y  RK LA+ RPRVRG+F +
Sbjct: 144 KRNERNFSKKIKYACRKTLADSRPRVRGRFAK 175


>Medtr7g108150.1 | zinc finger constans-like protein | HC |
           chr7:43981894-43978299 | 20130731
          Length = 372

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 33/42 (78%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVR 524
           R++AL+++KQK+K R +DK IRY +RK  AE R RV+G+F +
Sbjct: 328 RDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAK 369


>Medtr3g078613.1 | two-component response regulator ARR3-like
           protein | HC | chr3:35427921-35430565 | 20130731
          Length = 200

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 24/138 (17%)

Query: 27  DAFIDRSKVRILLCDDDPKSSEEVFTLLVKCSYQVTPVRSARQVIDALNAEGQY------ 80
           D+F+DR  +  LL           FT     S +VT V S  + +  L  +G        
Sbjct: 30  DSFVDRKVIERLL----------KFT-----SCKVTVVESGTRALQYLGLDGDTSSIGFD 74

Query: 81  ---IDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSAKDEVPIVVKCLRLGAADYL 137
              +++I+ +  +P   G +LLK +      R IPV++MS+++ +  +  CL  GA ++L
Sbjct: 75  GVKVNMIMTDYSMPGMTGYELLKKIKESSVFREIPVVVMSSENILTRIDSCLEEGAEEFL 134

Query: 138 VKPLRTNELLNLWTHMWR 155
           +KP++  ++  L   + R
Sbjct: 135 LKPVKLADVKRLTDFIMR 152


>Medtr8g104190.1 | zinc finger constans-like protein | HC |
           chr8:43867638-43869522 | 20130731
          Length = 416

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 35/45 (77%)

Query: 483 REAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVRKLS 527
           REA + ++++KR+ R F KKIRY  RK  AE+RPR++G+FV++ +
Sbjct: 358 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTA 402


>Medtr8g098725.2 | CCT motif protein | HC | chr8:41224283-41221171 |
           20130731
          Length = 328

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query: 480 ADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVR 524
           A+ R+  + K++ KR  R F+K I+Y  RK LA+ RPRVRG+F R
Sbjct: 226 AEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRVRGRFAR 270


>Medtr8g098725.1 | CCT motif protein | HC | chr8:41223454-41221171 |
           20130731
          Length = 324

 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 31/45 (68%)

Query: 480 ADRREAALMKFKQKRKDRCFDKKIRYVNRKRLAERRPRVRGQFVR 524
           A+ R+  + K++ KR  R F+K I+Y  RK LA+ RPRVRG+F R
Sbjct: 222 AEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRVRGRFAR 266


>Medtr4g021845.1 | two-component sensor histidine kinase, putative |
           LC | chr4:7317883-7316900 | 20130731
          Length = 221

 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 59  YQVTPVRSARQVIDALNAEGQYIDIILAEVDLPIKKGMKLLKYLSRDKELRRIPVIMMSA 118
           YQVT   +A   ++++  +  + D++L +  +P    M +  ++     L +IPVIMM+ 
Sbjct: 38  YQVTKCNTASDALNSMERKDCF-DVMLIDAHMP---NMDVYDFVQHVTLLLKIPVIMMAV 93

Query: 119 KDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRR 156
                 ++K +  GA  Y  KPL   E+  +W H+ R+
Sbjct: 94  DSTKSSIMKSIECGACTYWTKPLAEEEVKIMWQHVVRK 131