Miyakogusa Predicted Gene
- Lj4g3v1658740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1658740.1 Non Characterized Hit- tr|A5BYV5|A5BYV5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.2,9e-18,PROKAR_LIPOPROTEIN,NULL; PPR,Pentatricopeptide repeat;
PPR: pentatricopeptide repeat domain,Pentatri,CUFF.49550.1
(550 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 822 0.0
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 362 e-100
Medtr5g006420.1 | organelle transcript processing protein, putat... 347 3e-95
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 339 3e-93
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 339 3e-93
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 339 3e-93
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 339 3e-93
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 334 1e-91
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 333 3e-91
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 327 1e-89
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 326 4e-89
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 325 1e-88
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 324 1e-88
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 323 3e-88
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 322 5e-88
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 320 2e-87
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 318 7e-87
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 318 7e-87
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 317 3e-86
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 315 8e-86
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 313 3e-85
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 313 4e-85
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 312 5e-85
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 311 7e-85
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 311 1e-84
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 310 2e-84
Medtr3g052720.1 | organelle transcript processing protein, putat... 309 5e-84
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 306 4e-83
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 306 4e-83
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 306 4e-83
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 305 8e-83
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 304 2e-82
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 303 2e-82
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 303 3e-82
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 301 8e-82
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 301 1e-81
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 300 3e-81
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 299 5e-81
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 298 7e-81
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 298 7e-81
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 298 7e-81
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 297 2e-80
Medtr1g059720.1 | organelle transcript processing protein, putat... 297 2e-80
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 296 3e-80
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 296 3e-80
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 296 3e-80
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 295 7e-80
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 295 8e-80
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 294 2e-79
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 292 5e-79
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 292 7e-79
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 292 7e-79
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 292 7e-79
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 291 9e-79
Medtr4g113830.1 | organelle transcript processing protein, putat... 290 2e-78
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 290 3e-78
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 288 1e-77
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 288 1e-77
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 4e-77
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 4e-77
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 285 1e-76
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 284 2e-76
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 282 6e-76
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 9e-76
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 9e-76
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 281 1e-75
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 280 2e-75
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 280 2e-75
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 280 4e-75
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 280 4e-75
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 279 6e-75
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 277 2e-74
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 277 2e-74
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 277 2e-74
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 276 5e-74
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 276 5e-74
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 274 2e-73
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 274 2e-73
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 2e-73
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 273 3e-73
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 273 3e-73
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 272 6e-73
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 272 7e-73
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 271 1e-72
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 271 2e-72
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 271 2e-72
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 271 2e-72
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 270 3e-72
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 270 3e-72
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 269 6e-72
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 268 1e-71
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 267 2e-71
Medtr3g117150.1 | organelle transcript processing protein, putat... 266 3e-71
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 266 3e-71
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 266 3e-71
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 266 4e-71
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 266 4e-71
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 265 6e-71
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 265 1e-70
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 265 1e-70
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 265 1e-70
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 265 1e-70
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 264 1e-70
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 264 1e-70
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 264 2e-70
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 3e-70
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 263 4e-70
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 262 7e-70
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 261 1e-69
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 261 1e-69
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 261 2e-69
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 260 2e-69
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 259 4e-69
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 4e-69
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 4e-69
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 259 6e-69
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 258 8e-69
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 1e-68
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 257 2e-68
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 257 2e-68
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 257 2e-68
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 257 2e-68
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 257 2e-68
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 257 2e-68
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 257 2e-68
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 257 2e-68
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 3e-68
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 256 3e-68
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 4e-68
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 255 7e-68
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 255 7e-68
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 255 8e-68
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 255 8e-68
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 254 1e-67
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 254 2e-67
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 2e-67
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 254 2e-67
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 3e-67
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 253 3e-67
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 3e-67
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 253 3e-67
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 253 5e-67
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 252 6e-67
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 1e-66
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 251 2e-66
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 250 3e-66
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 4e-66
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 4e-66
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 249 5e-66
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 248 9e-66
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 248 1e-65
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 248 1e-65
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 247 2e-65
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 247 2e-65
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 247 2e-65
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 3e-65
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 5e-65
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 246 6e-65
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 246 6e-65
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 7e-65
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 244 2e-64
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 244 2e-64
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 2e-64
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 4e-64
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 243 4e-64
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 6e-64
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 8e-64
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 242 8e-64
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 241 2e-63
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 2e-63
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 2e-63
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 240 3e-63
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 4e-63
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 7e-63
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 7e-63
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 238 8e-63
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 8e-63
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 8e-63
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 1e-62
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 238 1e-62
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 238 1e-62
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 238 1e-62
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 238 1e-62
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 236 5e-62
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 5e-62
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 6e-62
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 1e-61
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 234 2e-61
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 2e-61
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 233 3e-61
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 233 3e-61
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 233 3e-61
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 233 3e-61
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 233 4e-61
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 6e-61
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 232 7e-61
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 2e-60
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 230 3e-60
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 3e-60
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 230 4e-60
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 229 4e-60
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 229 7e-60
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 229 7e-60
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 7e-60
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 8e-60
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 228 1e-59
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 227 2e-59
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 227 3e-59
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 4e-59
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 226 4e-59
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 226 4e-59
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 226 6e-59
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 6e-59
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 225 9e-59
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 225 9e-59
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 225 9e-59
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 9e-58
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 1e-57
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 221 2e-57
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 2e-57
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 5e-57
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 5e-57
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 219 6e-57
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 3e-56
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 215 7e-56
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 215 7e-56
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 213 6e-55
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 212 6e-55
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 211 1e-54
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 208 9e-54
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 208 1e-53
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 2e-53
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 207 2e-53
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 206 4e-53
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 206 4e-53
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 4e-53
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 206 6e-53
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 204 1e-52
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 204 2e-52
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 204 3e-52
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 203 4e-52
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 201 1e-51
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 201 2e-51
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 198 9e-51
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 197 2e-50
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 3e-50
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 3e-50
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 196 5e-50
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 193 3e-49
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 193 4e-49
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 192 6e-49
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 184 2e-46
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 182 1e-45
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 180 3e-45
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 180 4e-45
Medtr6g460480.1 | organelle transcript processing protein, putat... 179 5e-45
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 179 7e-45
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 171 2e-42
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 171 2e-42
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 171 2e-42
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 171 2e-42
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 165 1e-40
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 161 2e-39
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 3e-38
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 3e-38
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 147 3e-35
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 140 4e-33
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 140 4e-33
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 140 5e-33
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 139 5e-33
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 135 9e-32
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 134 2e-31
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 130 3e-30
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 127 2e-29
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 125 1e-28
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 121 2e-27
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 120 4e-27
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 118 2e-26
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 116 5e-26
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 116 6e-26
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 110 3e-24
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 110 4e-24
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 108 1e-23
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 104 2e-22
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 102 1e-21
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 101 2e-21
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 100 6e-21
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-20
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-20
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 98 2e-20
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 98 2e-20
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 97 3e-20
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 97 5e-20
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 1e-19
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 94 3e-19
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 6e-19
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 93 6e-19
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 7e-19
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 93 7e-19
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 93 7e-19
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 92 9e-19
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 1e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 1e-18
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 92 1e-18
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 3e-18
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 91 3e-18
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 91 4e-18
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 7e-18
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 90 7e-18
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 90 7e-18
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 89 2e-17
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 88 2e-17
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-17
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 87 3e-17
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-17
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-17
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 4e-17
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 87 4e-17
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 5e-17
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 86 8e-17
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-16
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-16
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 86 1e-16
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-16
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 86 1e-16
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 85 2e-16
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 2e-16
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 85 2e-16
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 84 3e-16
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 3e-16
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 4e-16
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 84 5e-16
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 83 6e-16
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 83 9e-16
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 82 2e-15
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 81 2e-15
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 3e-15
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 81 3e-15
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 81 3e-15
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 3e-15
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 81 3e-15
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 81 3e-15
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 3e-15
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 81 3e-15
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 4e-15
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 80 5e-15
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 80 6e-15
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 6e-15
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 9e-15
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 79 9e-15
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 1e-14
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 79 1e-14
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 1e-14
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 79 1e-14
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 79 1e-14
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 78 2e-14
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 78 2e-14
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 2e-14
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 78 2e-14
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 78 3e-14
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 78 3e-14
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 3e-14
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 77 4e-14
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 77 5e-14
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 77 5e-14
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 6e-14
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 6e-14
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 76 7e-14
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 7e-14
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 76 7e-14
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 8e-14
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 76 9e-14
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 76 1e-13
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 76 1e-13
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 75 1e-13
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 75 1e-13
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 75 1e-13
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 1e-13
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-13
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 5e-13
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 73 6e-13
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 73 6e-13
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 73 7e-13
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 73 7e-13
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 7e-13
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 73 8e-13
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 73 8e-13
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 72 1e-12
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 72 1e-12
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 72 1e-12
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 72 2e-12
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-12
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 2e-12
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 71 2e-12
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 71 2e-12
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 71 3e-12
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 3e-12
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 70 4e-12
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 70 4e-12
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 70 5e-12
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 70 6e-12
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 6e-12
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 70 7e-12
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 70 7e-12
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 69 1e-11
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 69 1e-11
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-11
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 69 1e-11
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 69 1e-11
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 69 1e-11
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 2e-11
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 2e-11
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 68 2e-11
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 68 2e-11
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 68 2e-11
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 68 3e-11
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 67 3e-11
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 3e-11
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 6e-11
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 67 7e-11
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 9e-11
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 66 1e-10
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 65 1e-10
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 65 2e-10
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 65 2e-10
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 65 2e-10
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 65 2e-10
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 65 2e-10
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 65 2e-10
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 65 2e-10
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 65 2e-10
Medtr5g012260.1 | PPR superfamily protein, putative | HC | chr5:... 64 3e-10
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 64 3e-10
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 64 3e-10
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-10
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 5e-10
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 63 8e-10
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 63 9e-10
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 62 1e-09
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 62 1e-09
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 1e-09
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-09
Medtr6g060490.1 | PPR superfamily protein, putative | LC | chr6:... 62 1e-09
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 62 2e-09
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 2e-09
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 61 2e-09
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 61 3e-09
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 61 3e-09
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 3e-09
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 4e-09
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 60 5e-09
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 60 5e-09
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 5e-09
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 60 7e-09
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 59 1e-08
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 59 1e-08
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 59 1e-08
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 59 2e-08
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-08
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 58 2e-08
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 58 2e-08
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 58 2e-08
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 58 2e-08
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 58 2e-08
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 58 3e-08
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 57 4e-08
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 4e-08
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 4e-08
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 57 5e-08
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 57 6e-08
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 8e-08
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 1e-07
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 56 1e-07
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 56 1e-07
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-07
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-07
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/549 (72%), Positives = 449/549 (81%), Gaps = 7/549 (1%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQ-NLIQIHSQVVLNGLSQKTNIITKLLSFYIA 60
+I+R VPA+G+R+IQ+H+F+LLQ+CNN + N++QIH+QV+LNGLS K NII KLLSFY A
Sbjct: 1 MIKRGVPATGKRAIQEHIFSLLQTCNNTETNILQIHTQVILNGLSHKHNIIAKLLSFYAA 60
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
S +LQHAHKLF I NP TTVWNH+IR YA S TPWKSV+ Y QMV EP+GFTYSFL
Sbjct: 61 SGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPDGFTYSFL 120
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
LSACVRGGL+REGEQ+HGIVL KGYCS+VFV TNLINFYA GGVEQAR+VFD M QRSV
Sbjct: 121 LSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSV 180
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
VSWNS+L GYV CGDFD AR VF+E+P+RNVVSWTTMIAG AQ G+C +ALSLFG+MRRA
Sbjct: 181 VSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRA 240
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
RVE GDLKLGRWIHWYVQ+R Q+Q SVRLNNAL+HMYASCG
Sbjct: 241 RVELDQVVLVAVLSACAELGDLKLGRWIHWYVQER-----QRQASVRLNNALMHMYASCG 295
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+I +AY++FTKM ++TVSWT +IMAFAKQGLGKEAL LFK M+SDG G G+RPD T
Sbjct: 296 IIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTF 355
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
I LCAC HAGFV+EG RIF SM TW IS +IEHYGCMVDLLSRAG LDEA+ LIE MP
Sbjct: 356 IAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIETMP 415
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELD-TDGAAGYLVLLSNIYAFAKRWQD 479
KPNDA+WGALLGGC+IHKNSELAS V LVAELD TD AAGYLVLLSNIYAFA RWQD
Sbjct: 416 FKPNDAIWGALLGGCRIHKNSELASRVANTLVAELDSTDQAAGYLVLLSNIYAFAGRWQD 475
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
VIAVRQKMIEMGVKKPPGQSWIQI GVVH+FV GDMTHKHS IYE L EI +Q+ V+ Y
Sbjct: 476 VIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDMTHKHSSLIYETLCEITEQARVEGY 535
Query: 540 EPDITGAFL 548
+PDIT L
Sbjct: 536 KPDITEVLL 544
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/512 (36%), Positives = 289/512 (56%), Gaps = 14/512 (2%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTI 74
+ +LL+ C+NI L QIH Q++ G + +++LL+ Y + + L +A +F I
Sbjct: 12 EQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRI 71
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+P+T +WN +IR Y+ S+ P +++ Y QM+ N +T+ FLL AC L E
Sbjct: 72 SSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETH 131
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+H ++ +G+ S V+ +L+ YA G ++ A +FD + R +VSWN+++ GY+ CG
Sbjct: 132 QIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCG 191
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
+ + A ++F MP +NV+SWT+MI G + G K+AL L +M A ++
Sbjct: 192 NVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLS 251
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L+ G+WIH Y + +N+ + L ALI MY CG + A VF+K+ +
Sbjct: 252 ACAGLGALEQGKWIHTY-----IGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEK 306
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ +WT++I FA G G EAL F M G++P + T VL AC H G V+
Sbjct: 307 KCVYTWTAIIGGFAVHGKGSEALDWFTQMQK-----AGIKPTSFTFTAVLTACSHTGLVE 361
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG+ +F SM+ + + P +EHYGCMVDLL RAGFL EA +E+MP+KPN A+WG+LL
Sbjct: 362 EGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNA 421
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C +HK+ EL + K + ELD + Y + L++I+A A W + VR + G+
Sbjct: 422 CHLHKHLELGKEI-GKFLIELDPEHDGRY-IHLASIHAAAGEWDEASQVRSHIKNKGLLN 479
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEI 526
PG S I +NGV H+F AG H H +Y++
Sbjct: 480 LPGCSTITLNGVAHEFFAGAEPHPHVREMYDM 511
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 347 bits (889), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/517 (37%), Positives = 278/517 (53%), Gaps = 14/517 (2%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
++IH G I T L++ Y + ++ A LF + +P WN II GY ++
Sbjct: 141 LEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQN 200
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++ + M S++ +P+ +LSAC G L G +H V GY + ++
Sbjct: 201 GHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQ 260
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
T LIN YA G ++ AR ++DG+ + ++ ++L+GY G AR +FD+M R++V
Sbjct: 261 TALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLV 320
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
W+ MI+G A+ + ++AL LF EM + R G L WIH YV
Sbjct: 321 CWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYV 380
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ R ++ +NNALI MYA CG + A +VF MP+++ +SW+SMI AFA G
Sbjct: 381 DRSGFGR-----ALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A+ LF+ M + P+ +T I VL AC HAG V+EG ++F+SM GISP
Sbjct: 436 ADSAIKLFRRMKE-----VNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPT 490
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EHYGCMVDL RA FL +A LIE MP PN +WG+L+ CQ+H +EL +L+
Sbjct: 491 REHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLL 550
Query: 453 A-ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
E D DGA LV+LSNIYA KRW DV +R+ M G+ K S I+IN VH F+
Sbjct: 551 ELEPDHDGA---LVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFM 607
Query: 512 AGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
D HK S IYE L E++ + + Y+P +G +
Sbjct: 608 MADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILI 644
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 197/425 (46%), Gaps = 27/425 (6%)
Query: 31 NLIQIHSQVV-LNGLSQKTNIITKLLSFYIASDQLQHAHK-----LFSTIDNPSTTVWNH 84
+L QIH+Q++ N + TN + L+ I + + +FS I NP T N
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQ 90
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
++R +RS P K++ Y + + A + F++ LL A + G ++HG+
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF 203
G+ + F++T LI YA + AR +FD M V+WN I+ GY G +D A R+F
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 204 DEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
++M ++ V T+++ C G ++ ++
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANC 270
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
G + L R I+ + + + ++ A++ YA G++ DA +F +M +R V
Sbjct: 271 GAMDLARKIYDGLSSK---------HLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVC 321
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W++MI +A+ +EAL LF M+ + PD IT++ V+ AC H G + + I
Sbjct: 322 WSAMISGYAESDQPQEALKLFDEMLQKRS-----VPDQITMLSVISACSHVGALAQANWI 376
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
++R+ G + ++D+ ++ G L +A + ENMP K N W +++ +H
Sbjct: 377 HTYVDRS-GFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHG 434
Query: 440 NSELA 444
N++ A
Sbjct: 435 NADSA 439
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 288/538 (53%), Gaps = 46/538 (8%)
Query: 7 VPASGRRSIQQHVFTLLQSC-NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS--DQ 63
P + I LLQ+C ++ Q L QIH+ + + + I K L F I S
Sbjct: 30 TPQNPSPHILTKCIALLQNCASSKQKLKQIHAFSIRHNVPLNNPDIGKYLIFTIVSLSAP 89
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA 123
+ +AH +F+ + NP+ WN +IRGYA S ++ YR+M+ + EP+ TY FLL A
Sbjct: 90 MSYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKA 149
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+ +R+GE +H + + G+ S +FV +L++ YA
Sbjct: 150 ISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYA----------------------- 186
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
+CGD + A +VF+ M R++V+W ++I G A G+ +ALSLF EM VE
Sbjct: 187 --------ACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVE 238
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G L+LGR +H Y+ + + N + +NN+L+ YA CG I
Sbjct: 239 PDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGN-----LHVNNSLLDFYAKCGSIR 293
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
+A QVF++M +R+ VSWTS+++ A G G+EALGLFK M + P IT + V
Sbjct: 294 EAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQK-----IVPREITFVGV 348
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC H G +DEG F M +GI PRIEHYGCMVDLLSRAG + A+ I++MP++P
Sbjct: 349 LYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQP 408
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
N +W LLG C +H + L + L+ +L+ + Y VLLSN+YA +RW DV V
Sbjct: 409 NAVIWRTLLGACTVHGDLSLGEIARSHLL-KLEPKHSGDY-VLLSNLYASERRWSDVQTV 466
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
R+ MIE GV K PG S +++ V +F GD +H S +Y +L +I + ++ Y P
Sbjct: 467 RRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDVYALLEKITELLKLEGYVP 524
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 285/518 (55%), Gaps = 15/518 (2%)
Query: 13 RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
R ++ T L++C I L +IH+ VV LSQ ++TK+L + +A LF
Sbjct: 7 RELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFK 66
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---PNGFTYSFLLSACVRGGL 129
+ +P+ +N IIR YA + ++ + QM++ P+ FT+ F++ +C
Sbjct: 67 QLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILC 126
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
R G QVHG+V G + E LI+ Y G + A VF+ M R V+SWNS++ G
Sbjct: 127 HRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFG 186
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
YV G + AR +FD+MP+R +VSWTTMI G + G AL +F EM+ +E
Sbjct: 187 YVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L++G+WIH Y + R + NALI MYA CG I +A+ +F
Sbjct: 247 IAVLPACAQLGALEVGKWIHMYADKNGFLR-----KTGICNALIEMYAKCGCIDEAWNLF 301
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++ ++ +SW++MI A G G EA+ LF+ M V P+ IT + VL AC H
Sbjct: 302 DQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK-----VRVAPNEITFLGVLLACSH 356
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G DEG + F M+ ++ I P IEHYGC++DLL R+G L +A I MP+KP+ +W
Sbjct: 357 TGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWN 416
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+LL C+IH+N ++A V+ K + EL+ + + Y VLL+N+YA +W+DV +R+ +
Sbjct: 417 SLLSSCRIHRNLQIA-VIAVKQLMELEPEESGNY-VLLANMYAEHGKWEDVSNIRKLIRN 474
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
+KK PG S I++N VV +FV+ D + S ++ IL
Sbjct: 475 KRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWIL 512
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 285/518 (55%), Gaps = 15/518 (2%)
Query: 13 RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
R ++ T L++C I L +IH+ VV LSQ ++TK+L + +A LF
Sbjct: 7 RELENRYITSLKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFK 66
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---PNGFTYSFLLSACVRGGL 129
+ +P+ +N IIR YA + ++ + QM++ P+ FT+ F++ +C
Sbjct: 67 QLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILC 126
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
R G QVHG+V G + E LI+ Y G + A VF+ M R V+SWNS++ G
Sbjct: 127 HRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFG 186
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
YV G + AR +FD+MP+R +VSWTTMI G + G AL +F EM+ +E
Sbjct: 187 YVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISI 246
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L++G+WIH Y + R + NALI MYA CG I +A+ +F
Sbjct: 247 IAVLPACAQLGALEVGKWIHMYADKNGFLR-----KTGICNALIEMYAKCGCIDEAWNLF 301
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++ ++ +SW++MI A G G EA+ LF+ M V P+ IT + VL AC H
Sbjct: 302 DQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK-----VRVAPNEITFLGVLLACSH 356
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G DEG + F M+ ++ I P IEHYGC++DLL R+G L +A I MP+KP+ +W
Sbjct: 357 TGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWN 416
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+LL C+IH+N ++A V+ K + EL+ + + Y VLL+N+YA +W+DV +R+ +
Sbjct: 417 SLLSSCRIHRNLQIA-VIAVKQLMELEPEESGNY-VLLANMYAEHGKWEDVSNIRKLIRN 474
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
+KK PG S I++N VV +FV+ D + S ++ IL
Sbjct: 475 KRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWIL 512
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/525 (36%), Positives = 282/525 (53%), Gaps = 16/525 (3%)
Query: 23 LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L++C + + + ++ V G + + L+ FY L++A ++F +
Sbjct: 151 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 210
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
W +I GYA +++E + M+ + EPN T ++SAC G L G++VH
Sbjct: 211 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEK 270
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V K ++ + L++ Y + AR +FD M + V SW S++ GY CGD + A
Sbjct: 271 VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 330
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
RR FD+ P +N V W+ MIAG +Q + K++L LF EM V
Sbjct: 331 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 390
Query: 260 GDLKLGRWIH-WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L LG WIH ++V +I+ SV L NA++ MYA CG I A +VF+ MP+R+ +
Sbjct: 391 TCLNLGDWIHQYFVVGKIIPL-----SVTLENAIVDMYAKCGSIDAATEVFSTMPERNLI 445
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW +MI +A G K+A+ +F M + G P+ IT + +L AC H G + EGR
Sbjct: 446 SWNTMIAGYAANGRAKQAINVFDQMRN-----MGFEPNNITFVSLLTACSHGGLISEGRE 500
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F +M R +GI P HY CMVDLL R G L+EA+ LI NMP++P +A WGALL C++H
Sbjct: 501 YFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMH 560
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N ELA + L+ LD + +G VLL+N A ++W DV VR M + GVKK PG
Sbjct: 561 GNVELARLSAHNLL-RLDPED-SGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGY 618
Query: 499 SWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
S I+I+G +F+ D +H S IY++L EI+ S ++ Y D+
Sbjct: 619 SLIEIDGGFVEFLVADESHPQSEEIYKVLEEILLLSKLEDYSYDL 663
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 207/459 (45%), Gaps = 87/459 (18%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF--YIASDQLQHAHKLFS 72
I +++SC+ ++ L QI +++ L G+ ++++++F S L +AH +F+
Sbjct: 43 ITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFN 102
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
++ P+T +WN +IRGY + P + + M E + ++ F L AC + + E
Sbjct: 103 RVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFE 162
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
GE V+ +V G+ + V LI+FYA RG ++ AR VFD + VV+W +++ GY +
Sbjct: 163 GESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAA 222
Query: 193 CGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
+ A VF+ M + +V V+ +++ C+
Sbjct: 223 HDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSD------------------------- 257
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G+L++G+ +H V+++ + S+ L+NAL+ MY C + DA ++
Sbjct: 258 ----------MGNLEMGKRVHEKVEEK-----NMRCSLSLHNALLDMYVKCDCLVDAREL 302
Query: 309 FTKMPQRSTVSWTSMIMAFAKQG-------------------------------LGKEAL 337
F +M + SWTSM+ +AK G KE+L
Sbjct: 303 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 362
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI--FASMNRTWGISPRIEH 395
LF M+ GV P TL+ VL AC ++ G I + + + +S +E+
Sbjct: 363 KLFHEMME-----RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLEN 417
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+VD+ ++ G +D A + MP + N W ++ G
Sbjct: 418 --AIVDMYAKCGSIDAATEVFSTMPER-NLISWNTMIAG 453
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++ +C+++ NL ++H +V + ++ LL Y+ D L A +LF +
Sbjct: 248 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 307
Query: 76 NPSTTVWNHIIRGYAR-----------SHTPWKSVECYRQMVSTEAEPNGFTYSF----- 119
W ++ GYA+ TP K+ C+ M++ ++ N S
Sbjct: 308 TKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHE 367
Query: 120 ---------------LLSACVRGGLLREGEQVHGIVLV-KGYCSNVFVETNLINFYAGRG 163
+LSAC + L G+ +H +V K +V +E +++ YA G
Sbjct: 368 MMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCG 427
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV------VSWTTM 217
++ A VF M +R+++SWN+++AGY + G A VFD+M RN+ +++ ++
Sbjct: 428 SIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQM--RNMGFEPNNITFVSL 485
Query: 218 IAGCAQKGRCKQALSLFGEMRR 239
+ C+ G + F M R
Sbjct: 486 LTACSHGGLISEGREYFDNMER 507
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 285/525 (54%), Gaps = 12/525 (2%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L +C + +L +QIH + + S + + L+ Y + A + F +D +
Sbjct: 158 LSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNI 217
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN +I Y ++ K++E + +M++ EP+ T + + SAC +REG Q+H
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHAR 277
Query: 140 VLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ N V N L++ YA V +AR VFD M R VVS S+++GY
Sbjct: 278 VMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKA 337
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
AR +F M RNVVSW +IAG Q G ++A+ LF ++R +
Sbjct: 338 ARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Query: 259 XGDLKLGRWIHWYV-QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
DLKLGR H ++ + ++ + + + N+LI MY CG++ D VF +M +R
Sbjct: 398 LADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDN 457
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW +MI+ +A+ G G EAL +F+ M+ V G RPD +T+I VL AC HAG V+EGR
Sbjct: 458 VSWNAMIVGYAQNGYGTEALEIFREML-----VSGERPDHVTMIGVLSACSHAGLVEEGR 512
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
F SM G+ P +HY CMVDLL RAG LDEA+ LI+ MP++P+ +WG+LL C++
Sbjct: 513 CYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKV 572
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N L V +L+ E+D + Y VLLSN+YA RW+DV+ VR++M +MGV K PG
Sbjct: 573 HGNITLGKYVAERLL-EIDPLNSGPY-VLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPG 630
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
SWI I +H F+ D H H IY IL + +Q Y P+
Sbjct: 631 CSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPE 675
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 103 RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGR 162
R++V + + ++ LL CV+ + E VH ++ + S +F++ L++ Y
Sbjct: 8 RKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKC 67
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G +E AR VFD M QR+ SWN++L G D A +F MP R+ SW M++G A
Sbjct: 68 GFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFA 127
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
Q+ R ++AL +M DL +G IH ++A+++
Sbjct: 128 QRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHG-----LIAKSRY 182
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
V + +AL+ MY+ C V+ A + F M R+ VSW S+I + + G +AL +F
Sbjct: 183 SLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVR 242
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M++ G+ PD ITL V AC + EG +I A + + + +VD+
Sbjct: 243 MMN-----CGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Query: 403 LSRAGFLDEAHGLIENMPLK 422
++ ++EA + + MPL+
Sbjct: 298 YAKCRRVNEARLVFDRMPLR 317
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 185/478 (38%), Gaps = 101/478 (21%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL +C +++ + +H++++ S + I +L+ Y L+ A K+F + +
Sbjct: 25 LLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRN 84
Query: 79 TTVWNHIIRGYA-----------------RSHTPWKSV-----------ECYRQMVSTEA 110
T WN ++ R W ++ E R +V +
Sbjct: 85 TFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHS 144
Query: 111 EP---NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
E N +++ LSAC L G Q+HG++ Y +V++ + L++ Y+ V
Sbjct: 145 EDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVAS 204
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
A+ FD M R++VSWNS++ Y Q G
Sbjct: 205 AQRAFDDMDVRNIVSWNSLITCY-------------------------------EQNGPA 233
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+AL +F M +E ++ G IH R++ ++ + +
Sbjct: 234 GKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH----ARVMKHDKYRNDLV 289
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS-- 345
L NAL+ MYA C + +A VF +MP R VS TSM+ +AK K A +F M+
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349
Query: 346 -------------DGAGVDGVR-----------PDAITLIVVLCACCHAGFVDEGRRIFA 381
+G + VR P T +L AC + + GR+
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 382 SMNRT--W---GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + W G I ++D+ + G +++ + E M L+ ++ W A++ G
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERM-LERDNVSWNAMIVG 466
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/523 (33%), Positives = 284/523 (54%), Gaps = 17/523 (3%)
Query: 26 CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQL---QHAHKLFSTIDNPSTTVW 82
C + + Q+H+ + N L Q + +IT LL F + + H LFS + +P+ ++
Sbjct: 21 CTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
+ +IR YAR+ S+ Y M++ P FT+S L S L G Q+H +
Sbjct: 81 SALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL---GSQLHLHAFL 137
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
G+ ++++V +I+ Y G ++ AR VFD M R VV+W ++ Y GD D A +
Sbjct: 138 FGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACEL 197
Query: 203 FDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
F +P++++V+WT+M+ G +Q K+AL F +MR A V G
Sbjct: 198 FVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVS 257
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
WI + +R +V + +ALI MY+ CG + +AY VF M + + S++S
Sbjct: 258 GYADWIREIAES---SRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSS 314
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
MI+ FA G + A+ LF M+ +G ++P+ +T + + AC HAG V++G+++F +
Sbjct: 315 MIVGFAVHGRARSAIKLFYEMLENG-----IKPNHVTFVGLFTACSHAGMVEQGQQLFGA 369
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSE 442
M +G+SP +HY CM DLL RAG L++A L++ MP++PN +WGALLG IH N +
Sbjct: 370 MKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPD 429
Query: 443 LASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
+A + L EL+ D YL LLS YA A +W DV VR+ M E ++K PG SW++
Sbjct: 430 VAEIASRSLF-ELEPDNLGNYL-LLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVE 487
Query: 503 I-NGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
NG++H+F AGD+ H I + L +++++ Y+P +
Sbjct: 488 AKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLN 530
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/508 (36%), Positives = 272/508 (53%), Gaps = 16/508 (3%)
Query: 23 LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L++C + + + ++ V G + + L+ FY L++A ++F +
Sbjct: 101 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 160
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
W +I GYA +++E + M+ + EPN T ++SAC G L G++VH
Sbjct: 161 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEK 220
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V K ++ + L++ Y + AR +FD M + V SW S++ GY CGD + A
Sbjct: 221 VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 280
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
RR FD+ P +N V W+ MIAG +Q + K++L LF EM V
Sbjct: 281 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 340
Query: 260 GDLKLGRWIH-WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L LG WIH ++V +I+ SV L NA++ MYA CG I A +VF+ MP+R+ +
Sbjct: 341 TCLNLGDWIHQYFVVGKIIPL-----SVTLENAIVDMYAKCGSIDAATEVFSTMPERNLI 395
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW +MI +A G K+A+ +F M + G P+ IT + +L AC H G + EGR
Sbjct: 396 SWNTMIAGYAANGRAKQAINVFDQMRN-----MGFEPNNITFVSLLTACSHGGLISEGRE 450
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F +M R +GI P HY CMVDLL R G L+EA+ LI NMP++P +A WGALL C++H
Sbjct: 451 YFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMH 510
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N ELA + L+ LD + +G VLL+N A ++W DV VR M + GVKK PG
Sbjct: 511 GNVELARLSAHNLL-RLDPED-SGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGY 568
Query: 499 SWIQINGVVHDFVAGDMTHKHSYFIYEI 526
S I+I+G +F+ D +H S IY++
Sbjct: 569 SLIEIDGGFVEFLVADESHPQSEEIYKL 596
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 205/451 (45%), Gaps = 87/451 (19%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF--YIASDQLQHAHKLFSTIDNPSTT 80
++SC+ ++ L QI +++ L G+ ++++++F S L +AH +F+ ++ P+T
Sbjct: 1 MESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTF 60
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
+WN +IRGY + P + + M E + ++ F L AC + + EGE V+ +V
Sbjct: 61 MWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVV 120
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
G+ + V LI+FYA RG ++ AR VFD + VV+W +++ GY + + A
Sbjct: 121 WKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAM 180
Query: 201 RVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
VF+ M + +V V+ +++ C+
Sbjct: 181 EVFELMLLSHVEPNEVTLIAVVSACSD--------------------------------- 207
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G+L++G+ +H V+++ + S+ L+NAL+ MY C + DA ++F +M +
Sbjct: 208 --MGNLEMGKRVHEKVEEK-----NMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKD 260
Query: 317 TVSWTSMIMAFAKQG-------------------------------LGKEALGLFKTMVS 345
SWTSM+ +AK G KE+L LF M+
Sbjct: 261 VYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMME 320
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI--FASMNRTWGISPRIEHYGCMVDLL 403
GV P TL+ VL AC ++ G I + + + +S +E+ +VD+
Sbjct: 321 -----RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLEN--AIVDMY 373
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ G +D A + MP + N W ++ G
Sbjct: 374 AKCGSIDAATEVFSTMPER-NLISWNTMIAG 403
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++ +C+++ NL ++H +V + ++ LL Y+ D L A +LF +
Sbjct: 198 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 257
Query: 76 NPSTTVWNHIIRGYAR-----------SHTPWKSVECYRQMVSTEAEPNGFTYSF----- 119
W ++ GYA+ TP K+ C+ M++ ++ N S
Sbjct: 258 TKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHE 317
Query: 120 ---------------LLSACVRGGLLREGEQVHGIVLV-KGYCSNVFVETNLINFYAGRG 163
+LSAC + L G+ +H +V K +V +E +++ YA G
Sbjct: 318 MMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCG 377
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV------VSWTTM 217
++ A VF M +R+++SWN+++AGY + G A VFD+M RN+ +++ ++
Sbjct: 378 SIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQM--RNMGFEPNNITFVSL 435
Query: 218 IAGCAQKGRCKQALSLFGEMRR 239
+ C+ G + F M R
Sbjct: 436 LTACSHGGLISEGREYFDNMER 457
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 293/530 (55%), Gaps = 17/530 (3%)
Query: 8 PASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQ 65
P+ +I + +LL C ++ L ++H+ + GLS + + I K+LSF S+ +
Sbjct: 6 PSCKTANINGTLLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDID 65
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+++++FS I +P+ WN IIRGY+ S P S+ + +M+ P+ TY FL+ A
Sbjct: 66 YSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASA 125
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
R + G VH ++ G+ S+ F++ +LI+ YA G + A VF+ M +++VSWNS
Sbjct: 126 RLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNS 185
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+L GY CG+ A++VF+ M R+V SW++ I G + G ++A+++F +MR +
Sbjct: 186 MLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKAN 245
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
G L+ GR +H Y+ ++ ++ L +L+ MYA CG I +A
Sbjct: 246 EVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPM-----TMVLQTSLVDMYAKCGAIEEA 300
Query: 306 YQVFTKMPQRST--VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
VF + + T W +MI A GL +E+L LFK M + G+R D IT + +
Sbjct: 301 LFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEM-----QMAGIRSDEITYLCL 355
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC H G V E F S+ + G++P EHY CMVD+L+RAG L A+ I +P++P
Sbjct: 356 LAACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEP 414
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
++ GA+ GC H+N +LA V KL+ ELD + Y + LSN+YA KRW D ++
Sbjct: 415 TASMLGAIFSGCINHRNFDLAETVGRKLI-ELDPNNDGRY-IGLSNVYAVVKRWDDSKSM 472
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
R+ M GVKK PG S+++I+ + H F+A D TH S Y +L ++ Q
Sbjct: 473 REAMERRGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQ 522
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 325 bits (832), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 272/499 (54%), Gaps = 31/499 (6%)
Query: 66 HAHKLFSTIDNPS---------------TTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
H FS +NP+ T W I + +++ K+ + QM+ E
Sbjct: 24 HPPSTFSPPNNPNKNQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEV 83
Query: 111 EPNGFTYSFLLSACVRG---GLLREGEQVHGIVLVKGYCSN-VFVETNLINFYAGRGGVE 166
EPN T LLSAC + G +H G+ N V V T LI+ YA G ++
Sbjct: 84 EPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLD 143
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
AR VFD MG R++VSWN+++ GY+ GD D A ++FD++P++NVVSWT +I G +K
Sbjct: 144 YARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKEC 203
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
++AL F EM+ A V G L LG W+H R+V + + + +V
Sbjct: 204 YEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVH-----RLVMKKEFRDNV 258
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
++ N+LI MYA CG I A QVF M QR+ VSW S+I+ FA GL +AL F++M +
Sbjct: 259 KVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKE 318
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G + P+ ++ L AC HAG +DEG +IFA + R SPRIEHYGC+VDL SRA
Sbjct: 319 G-----LEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRA 373
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G L EA +I+ MP+ PN+ + G+LL C+ + ELA V K EL G + Y VL
Sbjct: 374 GRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVM-KYQVELYPGGDSNY-VL 431
Query: 467 LSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEI 526
SNIYA +W VR++M E G++K S I+I+ +H FV+GD H+ + +IY
Sbjct: 432 FSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSA 491
Query: 527 LSEIIKQSHVDSYEPDITG 545
L + + H+ Y PD +G
Sbjct: 492 LELLSFELHLYGYVPDFSG 510
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++ Y+ + + A KLF + + W +I G+ + +++EC+R+M P+
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPD 222
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
T ++SAC G L G VH +V+ K + NV V +LI+ YA G +E AR VFD
Sbjct: 223 FVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFD 282
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQ 229
GM QR++VSWNSI+ G+ G D A F M N VS+T+ + C+ G +
Sbjct: 283 GMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDE 342
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
L +F +++R ++ P +
Sbjct: 343 GLKIFADIKR---------------------------------------DHRNSPRIEHY 363
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
L+ +Y+ G + +A+ V KMP + V S++ A QG + A + K V
Sbjct: 364 GCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYP 423
Query: 349 GVD 351
G D
Sbjct: 424 GGD 426
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++ +C N+ L + +H V+ ++ L+ Y ++ A ++F +
Sbjct: 226 VIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMS 285
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ WN II G+A + K++ +R M EPNG +Y+ L+AC GL+ EG +
Sbjct: 286 QRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLK 345
Query: 136 VHGIVLVKGYCSNVFVETN--LINFYAGRGGVEQARHVFDGMGQR-SVVSWNSILAGYVS 192
+ + + + ++ +E L++ Y+ G +++A V M + V S+LA +
Sbjct: 346 IFADI-KRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRT 404
Query: 193 CGDFDGARRVF 203
GD + A +V
Sbjct: 405 QGDVELAEKVM 415
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 285/532 (53%), Gaps = 17/532 (3%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
+L+ C +I + Q H+ ++ I K L +A L +AHKLF I P
Sbjct: 17 SLIDLCKSINQIKQTHANLITTAQITLPVIANKFLK-NVALASLTYAHKLFDQIPQPDLF 75
Query: 81 VWNHIIRGYARS-HTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLREGEQVHG 138
++N +I+ ++ S H+ S+ +R ++ PN +++ F AC G +REGEQV
Sbjct: 76 IYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFT 135
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ G NVFV LI + G VE AR+VFD R SWN+++ YV G+
Sbjct: 136 HAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVL 195
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A+ +FDEM R+VVSW+T+IAG Q G +AL F +M ++ V+
Sbjct: 196 AKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSN 255
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRST 317
L G+WIH Y+++ + N RL +LI MYA CG I A VF + +R
Sbjct: 256 LVALDQGKWIHVYIRRDNIKMND-----RLLASLIDMYAKCGEIDSASSVFHEHKVKRKV 310
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
W +MI FA G +EA+ +F+ M V+ V P+ +T I +L AC H V EG+
Sbjct: 311 WPWNAMIGGFAMHGKPEEAINVFEKM-----KVEKVSPNKVTFIALLNACSHGYMVKEGK 365
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
F M +GI+P IEHYGCMVDLLSR+G L ++ +I +MP+ P+ A+WGALL C+I
Sbjct: 366 SYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRI 425
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK-MIEMGVKKPP 496
+K+ E + +++ E+D + G VLL NIY+ + RW + VR+K I KK P
Sbjct: 426 YKDMERGYRI-GRIIKEIDPN-HIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIP 483
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
G S I++NGV H+F+ GD +H S IY L E+I + + Y P++ L
Sbjct: 484 GFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLKIAGYVPELGEVLL 535
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 283/557 (50%), Gaps = 49/557 (8%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
+I+ L ++H+ + Q ++ KL+ Y A + K+F + + + +N +IR
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIR 92
Query: 88 GYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
Y +H + +R+MV+ P+ +TY +L AC LR G +HG VL G
Sbjct: 93 SYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDF 152
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA-------- 199
N+FV LI Y G + +AR VFD M + VVSWNS++AGY FD A
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREME 212
Query: 200 -----------------------------RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
++F + +N++SW MI + QA
Sbjct: 213 DYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQA 272
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
+ L+ +M + RVE L LGR IH YV+++ + P++ L N
Sbjct: 273 VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLC-----PNLLLEN 327
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
+LI MYA CG + DA +VF +M R SWTS+I A+ G G A+ LF M++ G
Sbjct: 328 SLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQA- 386
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
PD+I + +L AC H+G +DEGR F M + I+PRIEHY C+VDLL RAG +D
Sbjct: 387 ----PDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVD 442
Query: 411 EAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNI 470
EA+ +I+ MP++PN+ +W LL C++ N ++ + L+ +L + +GY VLLSNI
Sbjct: 443 EAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLL-QLAPE-QSGYYVLLSNI 500
Query: 471 YAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
YA A RW++V +R M ++K PG S +++N VH F+AGD +H S IYE L +
Sbjct: 501 YAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVL 560
Query: 531 IKQSHVDSYEPDITGAF 547
+ + Y P+ A
Sbjct: 561 VAKMKELGYVPETDSAL 577
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 286/516 (55%), Gaps = 17/516 (3%)
Query: 20 FTLLQS-CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA-SDQLQHAHKLFSTIDNP 77
T+LQ+ C I + QI+ ++ GL+ T+ L+F + S + +A+KLF + NP
Sbjct: 31 LTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNP 90
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN IIR ++RS TP ++ + M+ ++ +P TY + A + G G Q+H
Sbjct: 91 NLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLH 150
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG----MGQRSVVSWNSILAGYVSC 193
G V+ G ++ F+ +I YA G + +AR VFDG + VV+ NS++ GY C
Sbjct: 151 GRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKC 210
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G+ D +R +FD+M R VSW +MI+G + G+ +AL LF +M+ E
Sbjct: 211 GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLL 270
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G L+ G+W+H Y++ RN + +V + A+I MY CG + +A +VF P
Sbjct: 271 NACAHLGALQHGKWVHDYIK-----RNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCP 325
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+R W S+I+ A G +EA F + S ++PD+++ I VL AC H G +
Sbjct: 326 RRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKL----LKPDSVSFIGVLTACKHLGAI 381
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
++ R F M + I P I+HY C+VD+L +AG L+EA LI+ MPLKP+ +WG+LL
Sbjct: 382 NKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLS 441
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C+ H+N ++A + V EL+ A+GY VL+SN++A + ++++ I R M E +
Sbjct: 442 SCRKHRNVQIARRAAQR-VYELNPSDASGY-VLMSNVHAASNKFEEAIEQRLLMKENLTE 499
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSE 529
K PG S I++ G VH+F+AG H + IY +L++
Sbjct: 500 KEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLLND 535
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 275/482 (57%), Gaps = 12/482 (2%)
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
++ ++ +L A+ +F+ WN +I G + ++++ Y++M + + PN
Sbjct: 200 ITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNE 259
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T ++S+C + L G++ H + G + + L++ Y G + AR +FD
Sbjct: 260 ITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
M Q+++VSW +++ GY G D AR + ++P ++VV W +I+GC Q + K+AL+LF
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALF 379
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
EM+ +E G L +G WIH Y++ R++ V L AL+
Sbjct: 380 HEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE-----RHKLSIDVALGTALVD 434
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MYA CG I A QVF ++PQR+ ++WT++I A G ++AL F M+ G +
Sbjct: 435 MYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIG-----IV 489
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
PD IT + VL ACCH G V+EGR+ F+ M+ + +SP+++HY CMVDLL RAG L+EA
Sbjct: 490 PDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEE 549
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFA 474
L++NMP+ + A+ GAL C+++ N ++ KL+ E+D + Y VLL+++Y+ A
Sbjct: 550 LVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLL-EIDPQDSGNY-VLLASMYSEA 607
Query: 475 KRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQS 534
K W++ + R+ M + GV+K PG S ++ING+VH+FV D++H S +IYE L + KQ
Sbjct: 608 KMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQL 667
Query: 535 HV 536
V
Sbjct: 668 DV 669
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 200/463 (43%), Gaps = 77/463 (16%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFST 73
+ + ++L+ C ++ L QI +Q+V GL + ++L++F S+ +L + ++
Sbjct: 57 ENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYR 116
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLRE 132
I + WN IRGY S Y++M+ +P+ TY LL C
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G V G VL G+ ++FV N+ + +S
Sbjct: 177 GLGVLGHVLKFGFECDIFVH-------------------------------NASITMLLS 205
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
CG+ A VF++ +R++V+W +MI GC ++G +A+ ++ EM +V
Sbjct: 206 CGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGM 265
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
DL LG+ H Y+++ + + ++ L NAL+ MY CG + A +F M
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKE-----HGLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
Query: 313 PQRSTVSWTSMIMAFAKQGL-------------------------------GKEALGLFK 341
Q++ VSWT+M++ +A+ G GKEAL LF
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
M + + PD +T++ L AC G +D G I + R +S + +VD
Sbjct: 381 EM-----QIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERH-KLSIDVALGTALVD 434
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
+ ++ G + A + E +P + N W A++ G +H N++ A
Sbjct: 435 MYAKCGNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQDA 476
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 35 IHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+ ++V+ + ++QKT + T ++ Y L A ++ I S WN II G ++
Sbjct: 311 LTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAK 370
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ + +M EP+ T LSAC + G L G +H + +V + T
Sbjct: 371 QGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGT 430
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM----PIR 209
L++ YA G + +A VF+ + QR+ ++W +++ G G+ A F +M +
Sbjct: 431 ALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVP 490
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ +++ +++ C G ++ F EM
Sbjct: 491 DEITFLGVLSACCHGGLVEEGRKYFSEM 518
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 268/487 (55%), Gaps = 20/487 (4%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPST 79
+ + C +++N IH+ L Q ++ KL F S L +AH +F + P+T
Sbjct: 13 MAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTT 72
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+N +IR ++ S TP S + +M P+ F+++FLL + R + +HG
Sbjct: 73 FFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS--RSFTMPLVHDIHGA 130
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGD 195
V G+C ++ V+ LI+ YA G AR VF+ + +VSW+ +L + G+
Sbjct: 131 VFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGE 190
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
D AR+VFD MP R+VVSWT M++ ++ R + L LF EMR A V
Sbjct: 191 LDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISA 250
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
GD ++GR +H +V++ N V L N+LI MY CG + +A+QVF + ++
Sbjct: 251 CAELGDAEMGRMVHKFVEE-----NGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRK 305
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
S ++W +M+M A G ++A LF+ M+ G V PD +T++ +L A H GFVDE
Sbjct: 306 SLITWNAMMMVCANHGYAEDAFRLFEGMIGSG-----VVPDGVTILALLVAYAHKGFVDE 360
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G R+F SM R +G+ PRIEHYG +VD+L R+G L EA+ L+ +MP+ ND +WGALLG C
Sbjct: 361 GIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGAC 420
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IH + + V KL+ EL D GY +LL +IY A R + +RQ M+ G +K
Sbjct: 421 RIHGDVGMGERVIKKLL-ELKPD-EGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKN 478
Query: 496 PGQSWIQ 502
PG SW++
Sbjct: 479 PGCSWVE 485
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 318 bits (816), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 268/487 (55%), Gaps = 20/487 (4%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPST 79
+ + C +++N IH+ L Q ++ KL F S L +AH +F + P+T
Sbjct: 13 MAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTT 72
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+N +IR ++ S TP S + +M P+ F+++FLL + R + +HG
Sbjct: 73 FFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS--RSFTMPLVHDIHGA 130
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR----SVVSWNSILAGYVSCGD 195
V G+C ++ V+ LI+ YA G AR VF+ + +VSW+ +L + G+
Sbjct: 131 VFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGE 190
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
D AR+VFD MP R+VVSWT M++ ++ R + L LF EMR A V
Sbjct: 191 LDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISA 250
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
GD ++GR +H +V++ N V L N+LI MY CG + +A+QVF + ++
Sbjct: 251 CAELGDAEMGRMVHKFVEE-----NGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRK 305
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
S ++W +M+M A G ++A LF+ M+ G V PD +T++ +L A H GFVDE
Sbjct: 306 SLITWNAMMMVCANHGYAEDAFRLFEGMIGSG-----VVPDGVTILALLVAYAHKGFVDE 360
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G R+F SM R +G+ PRIEHYG +VD+L R+G L EA+ L+ +MP+ ND +WGALLG C
Sbjct: 361 GIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGAC 420
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+IH + + V KL+ EL D GY +LL +IY A R + +RQ M+ G +K
Sbjct: 421 RIHGDVGMGERVIKKLL-ELKPD-EGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKN 478
Query: 496 PGQSWIQ 502
PG SW++
Sbjct: 479 PGCSWVE 485
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 289/524 (55%), Gaps = 33/524 (6%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTN---IITKLLSFYIASD--QLQHAH 68
+++ + TL++ C N++ + IH+ ++ + + + + T+LL F S+ +A+
Sbjct: 17 TLKNTLSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYAN 76
Query: 69 KLFSTIDNPSTTVWNHIIRGYA------RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+F I P V+N +IR Y S+ +K++ Y+QM++ PN T+ FL+
Sbjct: 77 NVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVK 136
Query: 123 ACVR---GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
C R GG + GE +H VL G+ ++VFV +LI+ + G + AR VFD M R
Sbjct: 137 GCSRLQYGGTV--GEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRD 194
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
VVSWNS++ GY+ G+ + A +F +M RN+++W ++I G Q G K++L +F EM+
Sbjct: 195 VVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQF 254
Query: 240 AR----VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
V+ G + G+W+H Y++ +N + V + AL++M
Sbjct: 255 LSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLR-----KNDIECDVVIGTALVNM 309
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y CG + A ++F MP++ +WT+MI FA G GK+A F M G V+P
Sbjct: 310 YGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAG-----VKP 364
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
+ +T + +L AC H+G V++GR F M R + I P+I HY CMVD+LSRA DEA L
Sbjct: 365 NHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFL 424
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
I +MP+KP+ +WGALLGGCQ+H N +L V L+ +L+ A Y + L +IY A
Sbjct: 425 IRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLI-DLEPHNHAFY-INLCDIYVKAG 482
Query: 476 RWQDVIAVRQKMIEMGVK-KPPGQSWIQINGVVHDFVAGDMTHK 518
++ +R M E G++ K PG S I+INGVV +F G++ K
Sbjct: 483 KYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGEIPMK 526
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 272/533 (51%), Gaps = 61/533 (11%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD---QLQHAHKLFSTI 74
H+ +L+ C ++ L QI + + TN+ITK ++F ++ ++HAH+LF I
Sbjct: 28 HLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQI 87
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
P+ ++N + RGYAR + P + + +R+ + L + V+ L EG+
Sbjct: 88 TQPNIVLFNTMARGYARLNDPLRMITHFRRCLR-------------LVSKVKA--LAEGK 132
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+H + G N++V LIN Y +CG
Sbjct: 133 QLHCFAVKLGVSDNMYVVPTLINMYT-------------------------------ACG 161
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D D +RRVFD++ VV++ +I A+ R +AL+LF E++ ++
Sbjct: 162 DIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLS 221
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L LGRW+H YV++ R V++N LI MYA CG + DA VF MP+
Sbjct: 222 SCALLGSLDLGRWMHEYVKKYGFDR-----YVKVNTTLIDMYAKCGSLDDAVNVFRDMPK 276
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R T +W+++I+A+A G G +A+ + M + V+PD IT + +L AC H G V+
Sbjct: 277 RDTQAWSAIIVAYATHGDGFQAISMLNEMKKEK-----VQPDEITFLGILYACSHNGLVE 331
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG F M +GI P I+HYGCMVDLL RAG LDEA+ I+ +P+KP LW LL
Sbjct: 332 EGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSA 391
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C H N E+ V ++ ELD D G V+ SN+ A +W DV +R+ MI+ G K
Sbjct: 392 CSTHGNVEMGKRVIERIF-ELD-DSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVK 449
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
PG S I++N VVH+F AG+ H S ++ L E++K+ Y PD + F
Sbjct: 450 IPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVF 502
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 293/564 (51%), Gaps = 62/564 (10%)
Query: 20 FTL---LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
FTL ++SC+ I ++ +H V+ G +++ +L+ Y +++ A K+F
Sbjct: 127 FTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDG 186
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE- 132
+ S WN ++ GYA + + +++M EPN T++ LLS+ R GL E
Sbjct: 187 MVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDET 246
Query: 133 ----------------------------------GEQVHGIVLVKGYCSNVFVETNLINF 158
G+++HG V+ GY +FV+ LI
Sbjct: 247 MELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGI 306
Query: 159 YAG-RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM-------PIR- 209
Y R + A +F + +S+VSWN++++ Y G D A VF ++ P+R
Sbjct: 307 YGKKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRP 366
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
NV+SW+ +I+G A KGR +++L LF +M+ A+V L LGR +H
Sbjct: 367 NVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELH 426
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
Y RN ++ + N L++MY CGV +A+ VF + R +SW S+I +
Sbjct: 427 AYA-----IRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGM 481
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
GLG+ A+ F M++ G +RPD IT + VL AC HAG V GR +F M + I
Sbjct: 482 HGLGENAVRTFDEMINAG-----LRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSI 536
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEP 449
P +EHY CMVDLL RAG L EAH ++ NMP++PN+ +WGALL C+++++++L +E
Sbjct: 537 EPTVEHYACMVDLLGRAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIES 596
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHD 509
+++A L ++ G +LLSNIYA + + +D VR E G KK PGQSWI++ V+
Sbjct: 597 RILA-LKSE-ITGSFMLLSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYT 654
Query: 510 FVAGDMTHKHSYFIYEILSEIIKQ 533
F AG++ H I+ IL+E+ Q
Sbjct: 655 FSAGNVVHLEQDEIFAILNELALQ 678
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 50/459 (10%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST--IDNPST 79
L C +Q QIH+Q++L + + +L++ Y + + A K+F+T ++ S
Sbjct: 32 LHHQCFTLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSN 91
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
VWN IIR +V+ Y QM+ P+GFT ++ +C + G + + VH
Sbjct: 92 LVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCH 151
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
VL G+ ++V V L+ Y +E A VFDGM RSV+SWN++++GY D+ GA
Sbjct: 152 VLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGA 211
Query: 200 RRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
RVF M + N V+WT++++ A+ G + + LF MR +E
Sbjct: 212 FRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSV 271
Query: 256 XXXXGDLKLGRWIHWYV-----QQRIVARNQ----------------------QQPSVRL 288
++ G+ IH +V + + +N + S+
Sbjct: 272 CADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVS 331
Query: 289 NNALIHMYASCGVIGDAYQVFTKM-------PQR-STVSWTSMIMAFAKQGLGKEALGLF 340
NALI YA G+ DAY+VF K+ P R + +SW+++I FA +G +++L LF
Sbjct: 332 WNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELF 391
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
+ M + V + +T+ VL C ++ GR + A R + I +V
Sbjct: 392 RQM-----QLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIRNL-MDDNILVGNGLV 445
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIH 438
++ + G +EAH + +N +K D + W +L+GG +H
Sbjct: 446 NMYMKCGVFEEAHLVFDN--IKGRDLISWNSLIGGYGMH 482
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 313 bits (801), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 264/499 (52%), Gaps = 20/499 (4%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T +++ Y+ +D L A +L + P WN +I GY R ++ + +R+M S +
Sbjct: 221 TTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 112 PNGFTYSFLLSAC----VRGGLLREGEQVHGIVL----VKGYCSNVFVETNLINFYAGRG 163
+ +TY+ L+SAC + G+ G QVHG +L + + V LI FY
Sbjct: 281 EDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYD 340
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
+ +AR VFD M R ++SWN++L+GYV+ + A +F EMP RNV++WT MI+G AQ
Sbjct: 341 RMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQ 400
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ 283
G ++ L LF +M+ +E G L G+ IH V R
Sbjct: 401 NGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH-----SQVIRLGHD 455
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
+ NALI MY+ CGV+ A VF MP +VSW +MI A A+ G G +A+ LF+ M
Sbjct: 456 SGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQM 515
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ + + PD IT + +L AC HAG + EGR F +M +GI+P +HY ++DLL
Sbjct: 516 MKED-----ILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLL 570
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGY 463
RAG +A +I++MP + +W ALL GC+IH N EL +L+ + G G
Sbjct: 571 CRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELI--PGQDGT 628
Query: 464 LVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFI 523
++LSN+YA +W +V VR M E GVKK PG SW+++ +VH F+ D H +
Sbjct: 629 YIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAV 688
Query: 524 YEILSEIIKQSHVDSYEPD 542
Y L +++ + Y PD
Sbjct: 689 YTYLQQLVNEMKKLGYVPD 707
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 184/484 (38%), Gaps = 88/484 (18%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS---------------- 78
+H+ ++ +G T I+ +L++ Y S + +A KLF I P
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86
Query: 79 -----------------TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
T +N +I Y+ + ++ + QM P+ FT+S +L
Sbjct: 87 VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146
Query: 122 SA-CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG---------VEQARHV 171
SA + R + +H V+ G V L++ Y + AR V
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206
Query: 172 FDGMGQRSVV--SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ 229
FD + + SW +++AGYV D AR + D + V+W MI+G ++G ++
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXX----XXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
A F M ++ G GR +H Y+ R V
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYI-LRTVVEPSHHFV 325
Query: 286 VRLNNALIHMYA-------------------------------SCGVIGDAYQVFTKMPQ 314
+ +NNALI Y + I +A +F++MP+
Sbjct: 326 LSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPE 385
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R+ ++WT MI A+ G G+E L LF M S +G+ P + AC G +D
Sbjct: 386 RNVLTWTVMISGLAQNGFGEEGLKLFNQMKS-----EGLEPCDYAFAGAITACSVLGSLD 440
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G++I + + R G + ++ + SR G ++ A + MP + W A++
Sbjct: 441 NGQQIHSQVIR-LGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV-DSVSWNAMIAA 498
Query: 435 CQIH 438
H
Sbjct: 499 LAQH 502
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
++L S +N Q QIHSQV+ G + L++ Y ++ A +F T+ +
Sbjct: 434 SVLGSLDNGQ---QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSV 490
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN +I A+ K++E + QM+ + P+ T+ +L+AC GL++EG +
Sbjct: 491 SWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTM 550
Query: 141 LVK-GYCSNVFVETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFD- 197
+ G LI+ G +A+ V M + W ++LAG G+ +
Sbjct: 551 CTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMEL 610
Query: 198 ---GARRVFDEMP 207
A R+ + +P
Sbjct: 611 GIQAADRLLELIP 623
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 268/514 (52%), Gaps = 50/514 (9%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNII--------TKLLSFYIASDQLQHAHKLFSTIDNPST 79
N++ L QIH+ +++NG + N + T L+ +AH+LF+ I P T
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
++N +IRG ++S P +++ Y +M + + +T+ F+L AC R + G VHG+
Sbjct: 74 FMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGM 133
Query: 140 VLVKGYCSNVFVETNLINF-------------------------------YAGRGGVEQA 168
VL G+ SN V L+ F YA RG ++ A
Sbjct: 134 VLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVA 193
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
R +F+ M +R +VSWN ++ GYV G+ + AR +FDE P+++VVSW MIAG G K
Sbjct: 194 RKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSK 253
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
QAL LF EM RA V GDL+ G+ +H +++ + + S L
Sbjct: 254 QALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVH----AKVMEISMGKLSTLL 309
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
NALI MYA CG I ++ VF + + +SW S+I+ A G GKE+L LFK M
Sbjct: 310 GNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTK- 368
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
+ P+ IT + VL AC HAG +DEG + F M+ + I P I H GCMVD+L RAG
Sbjct: 369 ----ICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGL 424
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
L EA I++M ++PN +W LL C++H + ELA V KL + + D + Y VL+S
Sbjct: 425 LKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFS-MRKDHSGDY-VLMS 482
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
N+YA W VR+ M + GV K G S+++
Sbjct: 483 NLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 276/529 (52%), Gaps = 19/529 (3%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C+ +++L IH V +G+ + + T L++ Y ++ A +F + +
Sbjct: 348 SILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR 407
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN + Y P K + +R+MV +P+ T +L AC L+ G+ +H
Sbjct: 408 NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIH 467
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + G +VFV L++ YA V +A+ VFD + R V SWN IL Y + +++
Sbjct: 468 GFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYE 527
Query: 198 GARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
+F +M V ++W+ +I GC + R ++A+ +F +M+ +
Sbjct: 528 KGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSIL 587
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
L++G+ IH YV R+ + + NAL+ MYA CG + + VF MP
Sbjct: 588 RACSLSECLRMGKEIHCYV-----FRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMP 642
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ SW +MI A G GKEAL LF+ M+ + V+PD+ T VL AC H+ V
Sbjct: 643 IKDVFSWNTMIFANGMHGNGKEALSLFEKML-----LSMVKPDSATFTCVLSACSHSMLV 697
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+EG +IF SM+R + P EHY C+VD+ SRAG L+EA+G I+ MP++P W A L
Sbjct: 698 EEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
GC+++KN ELA + KL E+D +G+A Y+ L NI AK W + +R+ M E G+
Sbjct: 758 GCRVYKNVELAKISAKKLF-EIDPNGSANYVTLF-NILVTAKLWSEASKIRKLMKERGIT 815
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
K PG SW + VH FVAGD ++ S IY L E+ + Y+PD
Sbjct: 816 KTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPD 864
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 52/368 (14%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L C+++Q+L +IH VV +G+ + + + ++FY ++ A +F +
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP 203
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ WN + Y P K + +R+MV +P+ T S +LSAC L+ G+
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKA 263
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG L G NVFV L+N Y V +A+ VFD M R+V++WNS+ + YV+CG
Sbjct: 264 IHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGF 323
Query: 196 FDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
VF EM + V ++ ++++ C+Q
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQ---------------------------- 355
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
DLK G+ IH + ++ V + AL+++YA+C + +A VF
Sbjct: 356 -------LKDLKSGKTIHGF-----AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
MP R+ V+W S+ + G ++ L +F+ MV ++GV+PD +T++ +L AC
Sbjct: 404 MPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV-----LNGVKPDLVTMLSILHACSDLQ 458
Query: 372 FVDEGRRI 379
+ G+ I
Sbjct: 459 DLKSGKVI 466
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 202/487 (41%), Gaps = 82/487 (16%)
Query: 19 VFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V +L +C+++Q+L IH + +G+ + + L++ Y + ++ A +F +
Sbjct: 245 VSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP 304
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ + WN + Y P K + +R+M +P+ S +L AC + L+ G+
Sbjct: 305 HRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKT 364
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG + G +VFV T L+N YA V +A+ VFD M R+VV+WNS+ + YV+CG
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424
Query: 196 FDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
VF EM + V V+ +++ C+
Sbjct: 425 PQKGLNVFREMVLNGVKPDLVTMLSILHACSD---------------------------- 456
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
DLK G+ IH + R+ V + NAL+ +YA C + +A VF
Sbjct: 457 -------LQDLKSGKVIHGF-----AVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDL 504
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD-------------------- 351
+P R SW ++ A+ ++ L +F M D D
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564
Query: 352 ----------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
G +PD T+ +L AC + + G+ I + R W + +VD
Sbjct: 565 MEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWK-DWDLARTNALVD 623
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKN-SELASVVEPKLVAELDTDG 459
+ ++ G L + + + MP+K D W ++ +H N E S+ E L++ + D
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIK--DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDS 681
Query: 460 AAGYLVL 466
A VL
Sbjct: 682 ATFTCVL 688
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 201/470 (42%), Gaps = 67/470 (14%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q H G+ +I + Y ++ A ++F + WN + Y
Sbjct: 61 QFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCG 120
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P + + +R+M + + N T S +L C L+ G+++HG V+ G +VFV +
Sbjct: 121 FPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSS 180
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-- 211
+NFYA V +A+ VFD M R VV+WNS+ + YV+CG VF EM + V
Sbjct: 181 AFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKP 240
Query: 212 --VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
V+ + +++ C+ DLK G+ IH
Sbjct: 241 DPVTVSCILSACSD-----------------------------------LQDLKSGKAIH 265
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
+ + + N V ++NAL+++Y SC + +A VF MP R+ ++W S+ +
Sbjct: 266 GFALKHGMVEN-----VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI--FASMNRTW 387
G ++ L +F+ M G++GV+PD + + +L AC + G+ I FA +
Sbjct: 321 CGFPQKGLNVFREM-----GLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKH--- 372
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
G+ + +V+L + + EA + + MP + N W + L C ++ +
Sbjct: 373 GMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSCYVNCGFPQKGL- 429
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV--------IAVRQKMIE 489
+ E+ +G LV + +I QD+ AVR M+E
Sbjct: 430 --NVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 274/521 (52%), Gaps = 14/521 (2%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L+ + +L+QIH+ +V L T + KL Y + L ++ LF+ N
Sbjct: 30 LIDKSKSKTHLLQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYT 89
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
W II + +S +++ Y QM++ +PN FT+S LL+ G ++ + +H V+
Sbjct: 90 WTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLN----GSTIQPIKSIHCHVI 145
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G CS+ +V T L++ YA G A +FD M ++S++S+ ++L Y G AR
Sbjct: 146 KFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARL 205
Query: 202 VFDEMP-IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
+FD M R+VV W MI G AQ G + L LF M +V+ G
Sbjct: 206 LFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVG 265
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
L+ GRW+H Y++ VR+ AL+ MY CG + DA +VF K+ + V+W
Sbjct: 266 ALESGRWVHSYIKNG--KDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAW 323
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
SMIM +A GL +EAL LF M +G VRP +T I +L AC H+G V +G +F
Sbjct: 324 NSMIMGYAVNGLSEEALKLFHEMHGEG-----VRPSYVTFIALLTACGHSGLVTKGWEMF 378
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
M + + PR+EH+GCMV+LL RAG L EA+ L+ +M + P+ +WG LL C++H N
Sbjct: 379 NLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNN 438
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
L + L++ + ++G VLLSNIYA A W VR M + GV+K PG S
Sbjct: 439 ISLGEEIAEFLLS--NDLASSGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSI 496
Query: 501 IQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
I++N VH+F+AGD+ H S IY +L E+ Y P
Sbjct: 497 IEVNNRVHEFIAGDLKHPKSKDIYLMLEEMNSWLKGKGYTP 537
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 41/265 (15%)
Query: 15 IQQHVFTL--LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
IQ + FT L + + IQ + IH V+ GL T + T L+ Y A KLF
Sbjct: 118 IQPNAFTFSSLLNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFD 177
Query: 73 TID--------------------------------NPSTTVWNHIIRGYARSHTPWKSVE 100
+ N VWN +I GYA++ P + +
Sbjct: 178 KMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLL 237
Query: 101 CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV---KGYCSNVFVETNLIN 157
+R+M+ + +PN T +LS+C + G L G VH + V V T L++
Sbjct: 238 LFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVD 297
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VS 213
Y G +E AR VFD + + VV+WNS++ GY G + A ++F EM V V+
Sbjct: 298 MYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVT 357
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMR 238
+ ++ C G + +F M+
Sbjct: 358 FIALLTACGHSGLVTKGWEMFNLMK 382
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 204/605 (33%), Positives = 300/605 (49%), Gaps = 78/605 (12%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD 62
I F S RR +++++ T L C N ++ QIH+Q++ L Q I KL++ Y ++
Sbjct: 10 IRAFTWFSLRRHLEENI-TDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTN 68
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE---PNGFTYSF 119
L A +F+ + +P+ ++N++IR Y+ S S+ + ++ + + FTY F
Sbjct: 69 NLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPF 128
Query: 120 LLSACV-RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
LL C L + VH V G+ ++FV +LI+ Y G VE A VF GM +R
Sbjct: 129 LLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEER 188
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
VVSWNS++ G V GD DGA +VFDEMP R+ VSW TM+ G + G +A LF M
Sbjct: 189 DVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERM- 247
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGR-------------W---IHWYVQQRIVAR--- 279
E GD+ + R W I Y ++ V
Sbjct: 248 ---AERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMN 304
Query: 280 ---NQQQPSVRLNNA-LIHMYASC---GVIG----------------------------- 303
++ +RL++ I + A+C G++G
Sbjct: 305 LCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYA 364
Query: 304 ------DAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
DA++VF M ++ VSW SMI F G G++++ LF TMV +G +PD
Sbjct: 365 KCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVR-----EGFKPD 419
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
T I +LCAC HAG V+EGR F SM R +GI P+IEHYGCMVDLL R G L EA L+
Sbjct: 420 RYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLV 479
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+MP +PN + G LLG C++H + +LA+ V L + +D G LLSNIYA +
Sbjct: 480 RSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSD--PGNFSLLSNIYAQSGD 537
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
W +V VR++M + G +KP G S I++ VH+F D +H S IY ++ ++
Sbjct: 538 WINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQ 597
Query: 537 DSYEP 541
Y P
Sbjct: 598 VGYVP 602
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 260/475 (54%), Gaps = 12/475 (2%)
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A LF I+ W+ +I Y ++ +++ + M + + +SAC
Sbjct: 261 ARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTS 320
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
+R G VHG+ G V ++ LI+ Y+ G + A+ +F G +VSWNS+
Sbjct: 321 LSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSM 380
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
++GY+ CG + A+++FD M ++VVSW+ MI+G AQ G +A++LF EM+ +
Sbjct: 381 ISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDE 440
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
L LG+WIH Y+ ++N+ +V L L+ MY CG + +A
Sbjct: 441 TAIVSVISACTHMAALDLGKWIHAYI-----SKNEFNVNVILGTTLVDMYMKCGCVENAL 495
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+VF M ++ +W ++I+ A GL +++L +F M P+ IT + VL A
Sbjct: 496 EVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKT-----LPNEITFMGVLGA 550
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C H G VDEGRR F+SM + I P ++HYGCMVDLL RAG L EA LIE+MP+ P+ A
Sbjct: 551 CRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVA 610
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
WGALLG C+ H N+E+ + KL+ +L D G+ VLLSNIYA W DV+ +R
Sbjct: 611 TWGALLGACRKHHNNEMGERLGRKLI-QLQPD-HDGFHVLLSNIYASKGNWGDVLEIRGI 668
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
M + GV K PG S I+ NG+VH+F+AGD TH I +L+E+ + ++ Y P
Sbjct: 669 MAQHGVVKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHMLNEVAAKLKIEGYAP 723
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/477 (28%), Positives = 221/477 (46%), Gaps = 77/477 (16%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPSTT 80
L C + QI SQ++L G T ++L++F S+ Q++ K+F+ + NP+T
Sbjct: 51 LHRCQWVNQFKQILSQMILTGYITDTYAASRLVNFSTHSNFIPFQYSLKIFNHLHNPNTF 110
Query: 81 VWNHIIRGYARSH-TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+WN I+R + H +P +++ Y+ + P+ +TY LL +C EG+Q+H
Sbjct: 111 IWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARVSEPEGKQIHDH 170
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+ G+ S+V+V LIN YA G + A VF +VSWN++LAGYV+ GD A
Sbjct: 171 VVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEA 230
Query: 200 RRVFDEMPIRN-------------------------------VVSWTTMIAGCAQKGRCK 228
V+D+MP+RN +VSW+ MI+ Q G C+
Sbjct: 231 ECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCE 290
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
+AL LF +M V +++GR +H + A+ Q V L
Sbjct: 291 EALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVH-----GLAAKIGIQDYVSL 345
Query: 289 NNALIHMYASCGVIGDAYQVFT-------------------------------KMPQRST 317
NALIH+Y++CG I DA ++F+ M ++
Sbjct: 346 QNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDV 405
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW++MI +A+ G EA+ LF+ M + G+RPD ++ V+ AC H +D G+
Sbjct: 406 VSWSAMISGYAQHGCFSEAVALFQEM-----QLLGIRPDETAIVSVISACTHMAALDLGK 460
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I A +++ + + +VD+ + G ++ A + M K + W AL+ G
Sbjct: 461 WIHAYISKN-EFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEK-GVSTWNALILG 515
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 288/560 (51%), Gaps = 89/560 (15%)
Query: 14 SIQQH---------VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF--YIASD 62
S+QQH + TLL++C IQ+L Q+H+ ++ GL Q +I+ +S ++
Sbjct: 4 SLQQHCSSTRSSACIATLLKACKRIQHLQQVHASIIQRGLEQDQFLISNFISLANTLSIS 63
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
L ++ +F+ + NPST +WN IR + +S ++ + +M + A P+ +TY ++
Sbjct: 64 TLSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIK 123
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC + G+ VHG V G ++FV T L++ Y G + AR VFD + R+VVS
Sbjct: 124 ACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVS 183
Query: 183 WNSILAGYVSCGD-------FD------------------------GARRVFDEMPIRNV 211
W +++ GYV+ GD FD AR VFD MP +NV
Sbjct: 184 WTAMVVGYVTAGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNV 243
Query: 212 VSWTTMIAGCA-------------------------------QKGRCKQALSLFGEMRRA 240
VS+TTMI G A Q G +AL +F EM
Sbjct: 244 VSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESM 303
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
+V GDLKL + + YV + + QQ V +AL+ M A CG
Sbjct: 304 KVIPDEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSI--DLQQDYVI--SALVDMNAKCG 359
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ A ++F +MP+R VS+ SMI F+ G G++A+ LF M+ ++G+ PD
Sbjct: 360 NMERALKLFREMPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRML-----MEGIVPDEAAF 414
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+VL AC H+G VD+G + F SM +GISP +H+ CMVDLL R+G L +A+ LI++M
Sbjct: 415 TIVLTACSHSGLVDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMH 474
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
++PN WGAL+G C++H ++EL +V +L EL+ AA Y VLLSNIYA A RW+DV
Sbjct: 475 IEPNAGAWGALIGACKLHGDTELGEIVANRLF-ELEPQNAANY-VLLSNIYAAAGRWKDV 532
Query: 481 IAVR----QKMIEMGVKKPP 496
VR Q M E+G+ P
Sbjct: 533 SLVRILNVQNM-EIGMSSCP 551
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 306 bits (784), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/549 (34%), Positives = 277/549 (50%), Gaps = 57/549 (10%)
Query: 13 RSIQQHVFTLLQS-CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
R +Q + TLL S CN + L QIH+ ++ GL I+TK S S L H
Sbjct: 14 RLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTS---TSSNLNSIHYAT 70
Query: 72 STIDNPSTT-----------VWNHIIRGYARSH-TPWKSVECYRQMVSTEAEPNGFTYSF 119
S + PS T ++N +IR Y+++ + S YR M+ PN FT+ F
Sbjct: 71 SFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPF 130
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
+L C G LR G+ VHG V+ G+ +V V LI+ Y G DG
Sbjct: 131 VLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE--------DG----- 177
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
F+ A +VFD+ P + V+W+ MIAG + G +A+ LF EM+
Sbjct: 178 ----------------FEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQV 221
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
V G L+LG+W+ YV+++ + + SV L NALI M+A C
Sbjct: 222 MGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPK-----SVELCNALIDMFAKC 276
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + A ++F +M R+ VSWTS+I A G G +A+ LF MV +G + PD +
Sbjct: 277 GNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG-----ITPDDVA 331
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC H+G VD+GR F SM R + I P++EHYGCMVDLL R GF+ EA ++ M
Sbjct: 332 FIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKM 391
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P +PN +W ++ C +L + +L+ + + Y VLLSNIYA ++W+
Sbjct: 392 PFEPNQIIWRTIITACHATGELKLGESISKELIKS-EPMHESNY-VLLSNIYAKLRQWEK 449
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
VR+ M G+KK PG + I++N +++FVAGD +H IYE++ E+ ++ Y
Sbjct: 450 KTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGY 509
Query: 540 EPDITGAFL 548
P + L
Sbjct: 510 VPTTSQVLL 518
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 270/509 (53%), Gaps = 21/509 (4%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q H + N + +I KLL L +A L P+T ++N +I+ + H
Sbjct: 6 QFHGYTLRNNIDNTKILIEKLLQI----PNLNYAQVLLHHSQKPTTFLYNKLIQACSSKH 61
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ Y QM PN +T++FL + C L G+ +H + G+ +VF T
Sbjct: 62 ---QCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFAST 118
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ YA G ++ AR+VFD M + + +WN+++AG GD + A +F MP RNVVS
Sbjct: 119 ALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVS 178
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
WTTM++G Q + ++AL LF M R + V G L++G+ + Y
Sbjct: 179 WTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYA 238
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQG 331
++ +N + + NA++ MYA CG I A++VF ++ + R+ SW SMIM A G
Sbjct: 239 RKNGFFKN-----LFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHG 293
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
+A+ L+ M+ +G PD +T + +L AC H G V++G+ +F SM R + I P
Sbjct: 294 QCHKAIQLYDQMLREG-----TLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIP 348
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
++EHYGCMVDLL RAG L EA+ +I+ MP+KP+ +WG LLG C H N ELA V L
Sbjct: 349 KLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESL 408
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
L+ Y V+LSNIYA A +W V +R+ M + K GQS+I+ G +H F+
Sbjct: 409 FV-LEPWNPGNY-VILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFI 466
Query: 512 AGDMTHKHSYFIYEILSEIIKQSHVDSYE 540
D +H S I+ +L+ + + D E
Sbjct: 467 VEDRSHSESSEIFALLNGVYEMIKFDKNE 495
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 41/267 (15%)
Query: 14 SIQQHVFTLL-QSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
S Q+ F L +C ++ +L IH+Q + +G T LL Y L+ A
Sbjct: 76 SPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARN 135
Query: 70 LFSTIDNPSTTVWNHIIRGYARSH-----------TPWKSVECYRQMVS----------- 107
+F + WN ++ G R P ++V + MVS
Sbjct: 136 VFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKA 195
Query: 108 ----------TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ PN T + +L AC G L G++V G+ N+FV ++
Sbjct: 196 LGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLE 255
Query: 158 FYAGRGGVEQARHVFDGMGQ-RSVVSWNSILAGYVSCGDFDGARRVFDEM----PIRNVV 212
YA G ++ A VFD +G+ R++ SWNS++ G G A +++D+M + + V
Sbjct: 256 MYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDV 315
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRR 239
++ ++ C G ++ +F M R
Sbjct: 316 TFVGLLLACTHGGMVEKGKHVFQSMTR 342
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 305 bits (781), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 287/596 (48%), Gaps = 75/596 (12%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+R +++ TLL+SC N + L QI +Q+V +GL + ++ ++ HA KLF
Sbjct: 8 QRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLF 67
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
I P+T WN + RGY ++ +V + ++ PN FT+ ++ +C + +R
Sbjct: 68 DKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVR 127
Query: 132 EGEQVHGIVLVKGYCS-------------------------------NVFVETNLINFY- 159
EGE+VH G+ S NV V T +IN Y
Sbjct: 128 EGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYI 187
Query: 160 ------AGR-------------------GGVEQ-----ARHVFDGMGQRSVVSWNSILAG 189
+GR G +E AR +FD M R +SWN++L G
Sbjct: 188 LCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNG 247
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-RARVEXXXXX 248
Y G+ + +VFDEMP RNV SW +I G + G + L F M V
Sbjct: 248 YAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFT 307
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L +G+W+H Y + + ++ + N LI MYA CGVI +A V
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESI-----GYKGNLFVGNVLIDMYAKCGVIENAVVV 362
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F + ++ +SW ++I A G +ALG+F M S+G PD +T + +L AC
Sbjct: 363 FNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGE-----EPDGVTFVGILSACT 417
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G V +G F SM + I P+IEHYGCMVDLL RAG LD+A I MP++P+ +W
Sbjct: 418 HMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIW 477
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
ALLG C+++KN E+A + +L+ EL+ + A + V++SNIY R +DV ++ M
Sbjct: 478 AALLGACRLYKNVEIAELALQRLI-ELEPNNPANF-VMVSNIYKDLGRSEDVARLKIAMR 535
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ G +K PG S I+ N V +F + D H + IY +L + Y P+++
Sbjct: 536 DTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLS 591
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 286/527 (54%), Gaps = 31/527 (5%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQ--LQHAHKLFSTIDNPSTTVWNHIIRGYAR 91
QIH+ + N L++ + I +++L+F+ S + ++A LF+ I NP+ +N II Y
Sbjct: 6 QIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTT 65
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ K + +M++T PN T++ L+ ACV L EQV + + G S+V+
Sbjct: 66 NSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVS---LSSLEQVFTLSMKLGNSSDVYF 122
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+++IN ++ + AR VFD R+VV W S+++GY SCG + AR VFD+MP+RN
Sbjct: 123 VSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNE 182
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRR-----ARVEXXXXXXXXXXXXXXXXGDLKLGR 266
S++ M++G + G + + LF E+++ A ++ G + G+
Sbjct: 183 ASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGK 242
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
WIH YV++ N + + L ALI Y CG + A +VF KMP + +W++MI+
Sbjct: 243 WIHSYVEE-----NGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILG 297
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
A G K AL LF+ M G +P+ +T + VL AC H E R+F M+
Sbjct: 298 LAINGNNKMALELFEKMEKVGP-----KPNEVTFVGVLTACNHKSLFGESARLFGIMSEK 352
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+ I+P IEHYGC+VD+L+R+G + +A I +M ++P+ A+WG+LL GC +H + EL
Sbjct: 353 YNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQK 412
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGV 506
V L+ E + + Y VLL+N+YA +W+ V VR+ M + GV G S+I+I+
Sbjct: 413 VGKYLI-EFEPKHSGRY-VLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQT 470
Query: 507 VHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG---AFLGC 550
+H F A D +S IY++LS + K+ DI+G AF C
Sbjct: 471 IHKFFADDKCCLYSREIYDVLSHLGKKVE------DISGDNDAFFIC 511
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 270/568 (47%), Gaps = 80/568 (14%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
RR+ + + + L+S Q+ QIH+Q+++N L Q + T + + + + LF
Sbjct: 16 RRNSPEQLLSALESTTGTQHFNQIHTQLIINNLIQHPLLSTTAIKKLSSHPRTTPSSALF 75
Query: 72 -STIDNPSTTVWNHIIRGYARSHTPWKSVECY-RQMVSTEAEPNGFTYSFLLSACVRGGL 129
+ +P + N IIR Y RS P + Y +M++ PN +T+ +L CV G
Sbjct: 76 FDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHGC 135
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYA--GR------------------------- 162
EGE+ H V+ G+ S++FV +LI Y+ GR
Sbjct: 136 KLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDG 195
Query: 163 ----GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI 218
GG+ AR +FD M +R V SWN ++AGYVS GD A+ +F+ MP ++VVSW MI
Sbjct: 196 YVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMI 255
Query: 219 AGCAQKGRCKQALSLFGEMRRARVEXX--------------------------------- 245
GC + G AL F +M V
Sbjct: 256 DGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAM 315
Query: 246 --XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G L LG W+H Y++ N+ + V L L+ MYA CG +
Sbjct: 316 PNEATLVSVLTACANLGKLNLGLWVHSYIKS-----NEIKLDVLLETCLLTMYAKCGAMD 370
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A VF +MP +S VSW SMIM + G G +AL +F M G +P+ T I V
Sbjct: 371 LASDVFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQ-----KPNEATFICV 425
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC HAG V EG F M R + I P++EHYGCMVDLL+RAGF+ + LIE + +K
Sbjct: 426 LSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKG 485
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
A+WGALL GC+ H + ELA V +LV EL+ + Y +LLS++YA RW DV V
Sbjct: 486 GSAMWGALLSGCRTHLDLELAENVAKRLV-ELEPQDISPY-ILLSDVYAAQGRWDDVERV 543
Query: 484 RQKMIEMGVKKPPGQSWIQINGVVHDFV 511
R M G++K S + + D V
Sbjct: 544 RLAMKINGLQKEAASSLVHLEDFEKDSV 571
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 267/515 (51%), Gaps = 46/515 (8%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+ A F+ I P+T V+N +I+ SH+ +++ Y M+ + P+ +++S L+
Sbjct: 27 NINFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIK 86
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV-- 180
AC G+ +HG V G+ S+VFV+T L+ FY+ G V AR VFD M R V
Sbjct: 87 ACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYA 146
Query: 181 ------------------------------VSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
+WN+++ GY G+ + F E+P ++
Sbjct: 147 WTTMISAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKD 206
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
++SWTT+++ + R + + LF EM +V G L G+ +H
Sbjct: 207 IISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVH 266
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
+Y+ + V + ++LI MYA CG + + VF K+ +++ W SMI A
Sbjct: 267 FYLMVSGFGID-----VYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAA 321
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G KEAL +F M +G +RP+ +T + VL AC HAGF+ EGRR F SM + I
Sbjct: 322 HGYAKEALRMFAEMEREG-----IRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCI 376
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEP 449
SP++EHYGCMVDLLS+ G L++A +I M +PN +WGALL GC++H+N E+A V
Sbjct: 377 SPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEIARVTVR 436
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV-KKPPGQSWIQINGVVH 508
L+ + +G+ LL N+YA RW DV +R +M ++GV K+ PG SWI+IN +H
Sbjct: 437 NLM--ILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSSWIEINKEIH 494
Query: 509 DFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
F A D H ++ +L E+ +Q + + P++
Sbjct: 495 VFAASDKCHPSYGQVHLLLVELDEQLRLAGFVPEM 529
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 99/227 (43%), Gaps = 17/227 (7%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ T++ +C ++ L ++H ++++G I + L+ Y L+ + +F +
Sbjct: 246 ITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLK 305
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ WN +I G A +++ + +M PN T+ +L+AC G ++EG +
Sbjct: 306 EKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRR 365
Query: 136 VHGIVLVKGYCSNVFVETN--LINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVS 192
+++ YC + VE +++ + G +E A + GM + + W ++L G
Sbjct: 366 FF-TSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNG--- 421
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
C +V + I V MI + G ++++ E+ R
Sbjct: 422 C-------KVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNR 461
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 265/506 (52%), Gaps = 12/506 (2%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY 102
G+ T ++ LL Y+ + ++F + + ++N I+ Y + + +
Sbjct: 263 GVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVL 322
Query: 103 RQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGR 162
+M+ P+ T ++AC + G L G+ H V G + +I+ Y
Sbjct: 323 DEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKC 382
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G E A VFD M ++VV+WNS++AG V G+ + A R+F EMP N+VSW TMI
Sbjct: 383 GKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMV 442
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
Q ++A+ L EM+ ++ G L L +WI+ Y++ +N
Sbjct: 443 QASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIE-----KNDI 497
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
++L AL+ M++ CG +A +VF M +R +WT+ I A +G K A+ LF
Sbjct: 498 HIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDE 557
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M+ V+ D + +L A H G+VD+GR++F +M + G+SP+I HYGCMVDL
Sbjct: 558 MLKQD-----VKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDL 612
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
L RAG L+EA L+++MP+KPND +WG+ L C+ HKN E A+ + K + +L + G
Sbjct: 613 LGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEK-ITQLAPE-KVG 670
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYF 522
VLLSNIYA A +W DV VR +M E G +K G S I+++G++ +F +GD +H +
Sbjct: 671 IHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQ 730
Query: 523 IYEILSEIIKQSHVDSYEPDITGAFL 548
I +L EI + Y PD T +
Sbjct: 731 IGLMLQEINCRISQVGYVPDTTNVLV 756
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 188/425 (44%), Gaps = 47/425 (11%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
LQ+C + L Q+H ++ G+ +I + + L +A F + +++
Sbjct: 39 LQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMG-THESLNYALNAFKEDEGTKCSLY 97
Query: 83 --NHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGI 139
N +IRGYA S +++ Y M+ P+ FT+ FLLSAC + EG QVHG+
Sbjct: 98 TCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGV 157
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+ G ++FV +LI+FYA G V+ R VFD M +R+VVSW S++ GY
Sbjct: 158 VVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY--------- 208
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+VV+ K+A+ LF EM VE
Sbjct: 209 ----------SVVNMA------------KEAVCLFFEMVEVGVEPNPVTMVCAISACAKL 246
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
DL+LG+ + + + V N + NAL+ MY CG + ++F + ++ V
Sbjct: 247 KDLELGKKVCNLMTELGVKSN-----TLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVM 301
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
+ +++ + + GL E L + M+ G RPD +T++ + AC G + G+
Sbjct: 302 YNTIMSNYVQHGLAGEVLVVLDEMLQKGQ-----RPDKVTMLSTIAACAQLGDLSVGKSS 356
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
A + R G+ ++D+ + G + A + ++M K W +L+ G
Sbjct: 357 HAYVFRN-GLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK-TVVTWNSLIAGLVRDG 414
Query: 440 NSELA 444
ELA
Sbjct: 415 ELELA 419
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 209/491 (42%), Gaps = 88/491 (17%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL +C+ I +Q+H VV GL + + L+ FY A ++ K+F + +
Sbjct: 138 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 197
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W +I GY+ + ++V + +MV EPN T +SAC + L G++V
Sbjct: 198 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 257
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
++ G SN V L++ Y G + R +FD +++V +N+I++ YV G
Sbjct: 258 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 317
Query: 199 ARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
V DEM + + V+ + IA CAQ
Sbjct: 318 VLVVLDEMLQKGQRPDKVTMLSTIAACAQ------------------------------- 346
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC--------------- 299
GDL +G+ H Y V RN + ++NA+I MY C
Sbjct: 347 ----LGDLSVGKSSHAY-----VFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSN 397
Query: 300 -----------GVIGD-----AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
G++ D A ++F +MP+ + VSW +MI A + + +EA+ L + M
Sbjct: 398 KTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREM 457
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
+ G++ D +T++ + AC + G +D + I+ + + I ++ +VD+
Sbjct: 458 QN-----QGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKN-DIHIDMQLGTALVDMF 511
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGY 463
SR G A + ENM K + + W A + + N++ A + ++ L D A
Sbjct: 512 SRCGDPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEM---LKQDVKADD 567
Query: 464 LVLLSNIYAFA 474
V ++ + AF+
Sbjct: 568 FVFVALLTAFS 578
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/545 (34%), Positives = 283/545 (51%), Gaps = 40/545 (7%)
Query: 13 RSIQQHVFTLLQSCNN-IQNLIQIHSQVVLNGLSQKTNIITKLL---SFYIASDQLQHAH 68
+S ++ + +LL +CN ++ QIH+ + + GL KLL + I+ L ++
Sbjct: 6 KSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSL 65
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRG 127
+LF NP T ++N +IR + S TP S++ + Q++ P+ F+++F L
Sbjct: 66 RLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIAND 125
Query: 128 GL-LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
G R+G Q+H G+ ++FV T LI+ YA G E AR VFD M Q +VV+WN++
Sbjct: 126 GCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAV 185
Query: 187 LAGYVSCG-------DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+ CG F VF EM +R+ SW+TMI G A+ G A F E+ R
Sbjct: 186 VTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLR 245
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
R G + G+ +H ++++ V +NNALI Y+ C
Sbjct: 246 DRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFL-----CIVSVNNALIDTYSKC 300
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + A VF ++ A G EA+ +F M G VRPD +T
Sbjct: 301 GNVDMAKLVFN--------------ISLAMHGRADEAIRVFHEMEESG-----VRPDGVT 341
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I +L AC H+G V++G +F+ M +GI P IEHYGCMVDL RA L +A+ I M
Sbjct: 342 FISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQM 401
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P+ PN +W LLG C IH N ELA +V+ +L AE+D + + + VLLSN+YA A +W+D
Sbjct: 402 PILPNVIIWRTLLGACSIHGNIELAELVKARL-AEMDPNNSGDH-VLLSNVYAVAGKWKD 459
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI-IKQSHVDS 538
V +R+ MIE +KK PG S I+I+ V + FVAG+ ++ + ++ L EI ++ +
Sbjct: 460 VAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEG 519
Query: 539 YEPDI 543
Y P +
Sbjct: 520 YAPQV 524
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 264/499 (52%), Gaps = 12/499 (2%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+Q G+ + +L+ Y+A + A ++F I + WN +I GY++
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGR 215
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++V +R+M EP+ FT LLS + G G VH ++V G + V
Sbjct: 216 SEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNA 275
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ YA G ++ A+ VFD M + VVSW ++ Y + G D A F++MP +NVVSW
Sbjct: 276 LMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSW 335
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
++I Q+G +A+ LF M + V GDL LG+ H Y
Sbjct: 336 NSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSY--- 392
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ N S L NA+I MYA CG + A VF MP+++ VSW +I A A G GK
Sbjct: 393 --IFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGK 450
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ +F+ M + GV PD IT +L AC H+G VD G+ F MN T+GISP +E
Sbjct: 451 EAIEMFEKMQA-----SGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVE 505
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY CMVDLL R G L EA LI+ MP+KP+ +W ALLG C+ + N + + +L+ E
Sbjct: 506 HYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLL-E 564
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
L +G VLLSN+Y+ ++RW D+ + + + + G+KK S+I+I+G + F+ D
Sbjct: 565 LGRYN-SGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDD 623
Query: 515 MTHKHSYFIYEILSEIIKQ 533
H S IY +L +++
Sbjct: 624 KRHGASTSIYSMLGQLMDH 642
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 210/462 (45%), Gaps = 64/462 (13%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD 62
I + + + Q + L+ C +++ L +H+Q++L+GL+ + + KL+S +
Sbjct: 23 ISKTILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLR 82
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
L++AHKLF I P+ ++NH+I+GY+ S P KS+ YR+MV PN FT F+L
Sbjct: 83 DLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLK 142
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC G VH G S+ V+ ++N Y G + AR VFD + +R++VS
Sbjct: 143 ACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVS 202
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
WNS++ GY ++ GR ++A+ +F EM+ +
Sbjct: 203 WNSMINGY-------------------------------SKMGRSEEAVLMFREMQEVGL 231
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
E G+ LGR++H + +V + S+ + NAL+ MYA CG +
Sbjct: 232 EPDVFTLVGLLSVSTKHGNFDLGRFVHLH----MVVTGIEIDSI-VTNALMDMYAKCGNL 286
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM---------------VSDG 347
A VF +M + VSWT MI A+A GL AL F M V +G
Sbjct: 287 KCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEG 346
Query: 348 ---AGVD--------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY 396
VD GV + TL+ +L +C H G + G++ + + I+
Sbjct: 347 LYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDN-NITLSATLC 405
Query: 397 GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++D+ ++ G L A + MP K N W ++G +H
Sbjct: 406 NAIIDMYAKCGALQTAMDVFFGMPEK-NAVSWNVIIGALALH 446
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 5/202 (2%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG + + +L SC+++ +L Q HS + N ++ + ++ Y LQ
Sbjct: 361 SGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQT 420
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A +F + + WN II A +++E + +M ++ P+ T++ LLSAC
Sbjct: 421 AMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSH 480
Query: 127 GGLLREGEQVHGIV-LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR-SVVSWN 184
GL+ G+ I+ L G +V +++ RG + +A + M + VV W+
Sbjct: 481 SGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWS 540
Query: 185 SILAGYVSCGDFDGARRVFDEM 206
++L + G+ +++ ++
Sbjct: 541 ALLGACRTYGNLAIGKQIMKQL 562
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 259/493 (52%), Gaps = 16/493 (3%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEP 112
++S ++ S + A LF + + WN II GY K++E + M S+ +P
Sbjct: 214 MISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKP 273
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
+ FT +LSAC L+ G+Q+H ++ + V LI+ YA G VE AR +
Sbjct: 274 DKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIV 333
Query: 173 D--GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+ G +V+++ S+L GYV GD + AR +FD + R+VV+WT MI G AQ K A
Sbjct: 334 ELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDA 393
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
L LF M L G+ +H I R ++ SV + N
Sbjct: 394 LELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLH-----AIAIRLKEVSSVSVGN 448
Query: 291 ALIHMYASCGVIGDAYQVFTKM-PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
ALI MY+ G I DA +VF ++ +R T++WTSMI+A A+ GLG EA+ LF+ M+
Sbjct: 449 ALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFN-- 506
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
++PD IT + VL AC H G V++G+R F M I P HY CM+DL RAG +
Sbjct: 507 ---LKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLI 563
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSN 469
+EA+ I+ MP++P+ WG+LL C++HKN +LA V KL+ +D + + Y L+N
Sbjct: 564 EEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLL-IDPNNSGAYSA-LAN 621
Query: 470 IYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSE 529
++ W++ VR+ M + VKK G SW+QI VH F D H IY ++S+
Sbjct: 622 THSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYRMISK 681
Query: 530 IIKQSHVDSYEPD 542
I K+ + PD
Sbjct: 682 IWKEIKKIGFNPD 694
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 215/479 (44%), Gaps = 79/479 (16%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LLQS ++ + IH++++ +GL ++ LL+FY + AH+LFS + +
Sbjct: 16 LLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRT 75
Query: 79 TTVWNHIIRGYAR-----------------SHTPWKS--------------VECYRQMVS 107
T WN ++ YA+ W + + ++QM+S
Sbjct: 76 TFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMIS 135
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
P FT++ +L++CV G L G++VH V+ G V V +L+N Y G +
Sbjct: 136 DGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLR 195
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
+ VFD M R +WN +++ ++ G FD A +FD+M R+++SW ++IAG +G
Sbjct: 196 VKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYD 255
Query: 228 KQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+AL F +M R + ++ LKLG+ IH Y + R S
Sbjct: 256 SKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAY-----IVRADIDISG 310
Query: 287 RLNNALIHMYASCGV------------------------------IGD---AYQVFTKMP 313
+ NALI MYA G IGD A ++F +
Sbjct: 311 AVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLK 370
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R V+WT+MI+ +A+ L K+AL LF+ M+S+G RP++ TL VL +
Sbjct: 371 CRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGP-----RPNSYTLAAVLSVFSSLASL 425
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
D G+++ A R +S + ++ + S++G + +A + + + + W +++
Sbjct: 426 DHGKQLHAIAIRLKEVSS-VSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMI 483
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 152/333 (45%), Gaps = 33/333 (9%)
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P T+ +LL + ++ G +H ++ G +VF+ NL+NFY+ A +
Sbjct: 8 PKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRL 67
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F M QR+ SWN++L+ Y G+ + ARR+FD++P + VSWTTMI G Q GR A+
Sbjct: 68 FSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAI 127
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR------IVARN----- 280
F +M + G L +G+ +H +V + VA +
Sbjct: 128 HTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMY 187
Query: 281 -QQQPSVRLN--------------NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+ S+R+ N +I M+ G A +F +M R +SW S+I
Sbjct: 188 VKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIA 247
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ QG +AL F M + ++PD TL VL AC + + G++I A + R
Sbjct: 248 GYCHQGYDSKALETFSDMFRSSS----LKPDKFTLGSVLSACANLESLKLGKQIHAYIVR 303
Query: 386 T-WGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
IS + + ++ + +++G ++ A ++E
Sbjct: 304 ADIDISGAVGN--ALISMYAKSGAVEVARTIVE 334
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 125/291 (42%), Gaps = 38/291 (13%)
Query: 39 VVLNGLSQKTNII--TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPW 96
V L G S N+I T LL+ Y+ + A ++F ++ W +I GYA++
Sbjct: 333 VELRGTSN-INVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLK 391
Query: 97 KSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLI 156
++E +R M+S PN +T + +LS L G+Q+H I + S+V V LI
Sbjct: 392 DALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALI 451
Query: 157 NFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTT 216
Y+ G ++ AR VF+ + C + D ++WT+
Sbjct: 452 TMYSKSGCIKDARKVFNQI-----------------CTERD-------------TLTWTS 481
Query: 217 MIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI 276
MI AQ G +A+ LF +M + ++ G ++ G+ ++ +
Sbjct: 482 MIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGK--RYFNLMKN 539
Query: 277 VARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMA 326
V + +P+ +I ++ G+I +AY MP + ++W S++ A
Sbjct: 540 V--HHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSA 588
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 267/513 (52%), Gaps = 16/513 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H G+ + L+ Y ++ A ++F + W + Y +
Sbjct: 99 EVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCG 158
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P K ++ +R+M + +PN T S +L AC L+ G+++HG + G N+FV +
Sbjct: 159 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 218
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-- 211
L++ YA V +AR VFD M R VVSWN +L Y +++ +F +M V
Sbjct: 219 ALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRA 278
Query: 212 --VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+W +I GC + GR ++A+ +F +M++ + +L++G+ IH
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
YV R+ + + AL++MYA CG + + VF M ++ V+W +MI+A A
Sbjct: 339 CYV-----FRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAM 393
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
G GKEAL LF M+ + V+P+++T VL C H+ V+EG +IF SM R +
Sbjct: 394 HGNGKEALFLFDKML-----LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLV 448
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEP 449
P HY C+VD+ SRAG L+EA+ I+ MP++P + WGALL C+++KN ELA +
Sbjct: 449 EPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 508
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHD 509
KL E++ + Y+ L NI AK W + VR M E G+ K PG SW+Q+ VH
Sbjct: 509 KLF-EIEPNNPGNYVSLF-NILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHT 566
Query: 510 FVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
FV GD ++ S IY L E++++ + Y+PD
Sbjct: 567 FVVGDKSNIESDKIYNFLDELVEKMKMAGYKPD 599
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 141/357 (39%), Gaps = 58/357 (16%)
Query: 45 SQKTNIIT----KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVE 100
S TNI + +L+ + A +LF I P T + +I ++++
Sbjct: 5 SLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIK 64
Query: 101 CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
Y + +P+ + AC G ++VH G S+VFV LI+ Y
Sbjct: 65 IYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYG 124
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM------PIRNVVSW 214
VE AR VFD + R VVSW S+ + YV CG VF EM P N ++
Sbjct: 125 KCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKP--NPMTV 182
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
++++ CA+ DLK G+ IH +
Sbjct: 183 SSILPACAE-----------------------------------LKDLKSGKEIHGF--- 204
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
R+ ++ + +AL+ +YA C + +A VF MP R VSW ++ A+ K +
Sbjct: 205 --AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYE 262
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
+ LF M DGVR D T V+ C G +E +F M + G P
Sbjct: 263 KGFSLFLKM-----SRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM-GFKP 313
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
++ GDF+ AR++FD +P + + +T+I+ G +A+ ++ ++ ++
Sbjct: 23 LNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFL 82
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
GD + +H R V + NALIH Y C + A +VF
Sbjct: 83 AAAKACAVSGDALRVKEVH-----DDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+ R VSWTS+ + K G ++ + +F+ M G GV+P+ +T+ +L AC
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM-----GWSGVKPNPMTVSSILPACAEL 192
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---------- 420
+ G+ I R G+ + +V L ++ + EA + + MP
Sbjct: 193 KDLKSGKEIHGFAVRH-GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGV 251
Query: 421 ------------------------LKPNDALWGALLGGCQIHKNSELA 444
++ ++A W A++GGC + SE A
Sbjct: 252 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEA 299
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 299/614 (48%), Gaps = 110/614 (17%)
Query: 14 SIQQHVFTLLQS--CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI-----------A 60
+ ++ F +LQS + L++IH+ ++ N L +++TK +S A
Sbjct: 7 NTERKCFNILQSSKTKTFKTLLEIHAFILRNSLHNNLHLLTKFISSSTSLALSTPRRNDA 66
Query: 61 SDQLQHAHKLFSTIDNP--------STTVWNHI-IRGYARSHTPWK--SVECYRQMVSTE 109
+QHA +LF P +T + H +R + T + S +C+ +
Sbjct: 67 VSIVQHA-RLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFR----- 120
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
P+ +T++ +L C R+G Q+HG+VL +C +++V T+L++ Y G V AR
Sbjct: 121 --PSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFAR 178
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGD-------FDG------------------------ 198
VFD M RS+VSW +++ GY CGD FDG
Sbjct: 179 KVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDL 238
Query: 199 ARRVFDEMPIRNVVSWTT-------------------------------MIAGCAQKGRC 227
AR +FD+M ++NV+SWT+ MI G Q GR
Sbjct: 239 ARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRS 298
Query: 228 KQALSLFGEMR-RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
AL LF EMR VE L LG W+H +VQ RNQ SV
Sbjct: 299 HDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQ-----RNQLDGSV 353
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+ NAL+ MYA CG IG A VF +M ++ T SW ++I + G KEAL +F M+
Sbjct: 354 HVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLR- 412
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
+G P+ IT+ VL AC H G V+EGRR F +M R +GI P+IEHYGCM+DLL RA
Sbjct: 413 ----EGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDLLGRA 467
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G LDEA LI+ MP PN+ + + L C ++ A + K+ +++ +GA Y V+
Sbjct: 468 GRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERI-LKVAVKMEKEGAGDY-VM 525
Query: 467 LSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYF--IY 524
L N+YA +RW DV V++ M + G K S I+++G +FVAG +H HS+ I
Sbjct: 526 LRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYYSHSHSHLEAIQ 585
Query: 525 EILSEIIKQSHVDS 538
L ++ K V++
Sbjct: 586 STLGQLWKHMKVET 599
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 269/530 (50%), Gaps = 47/530 (8%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LLQSC + + L Q+H+Q G++ ++ TKL+ Y S+ L +A LF I
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQ 111
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ +WN +IRGYA + ++ Y +M+ P+ FT F+L AC + EG +H
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V+ G+ ++FV LI+ YA CG
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYA-------------------------------KCGCVM 200
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A RVFD++ +R+ V W +M+A AQ G +++SL EM V
Sbjct: 201 DAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSA 260
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L GR IH + R+ Q + ++ ALI MYA CG + A +F ++ ++
Sbjct: 261 DVACLPYGREIHGFGW-----RHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW ++I +A GL AL LF M + RPD IT + VL AC +DEGR
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKED------RPDHITFVGVLAACSRGRLLDEGR 369
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
++ M R +GI+P ++HY CM+DLL G LDEA+ LI NM +KP+ +WGALL C+I
Sbjct: 370 ALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKI 429
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N ELA + KL+ EL+ D + Y V+L+N+YA + +W+ V +RQ MI+ +KK
Sbjct: 430 HGNVELAELALEKLI-ELEPDDSGNY-VILANMYAQSGKWEGVEKLRQVMIDKRIKKNIA 487
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
SWI++ V+ F+AGD++H +S IY L + H Y PD F
Sbjct: 488 CSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVF 537
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 142/328 (43%), Gaps = 51/328 (15%)
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
+ Y+ LL +C+ L G+Q+H G N + T L++ YA + AR++FD
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQA 230
+ ++++ WN ++ GY G D A ++ +M + + ++ C+ A
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACS-------A 160
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
LS GE GR IH Y V ++ + + +
Sbjct: 161 LSAIGE----------------------------GRSIHEY-----VIKSGWERDLFVGA 187
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
ALI MYA CG + DA +VF K+ R V W SM+ A+A+ G E++ L + M +
Sbjct: 188 ALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAA----- 242
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
+GVRP TL+ V+ + + GR I R G + ++D+ ++ G +
Sbjct: 243 NGVRPTEATLVTVISSSADVACLPYGREIHGFGWRH-GFQSNDKVKTALIDMYAKCGSVK 301
Query: 411 EAHGLIENMPLKPNDALWGALLGGCQIH 438
A L E + K W A++ G +H
Sbjct: 302 VALALFERLREK-RVVSWNAIITGYAMH 328
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 285/559 (50%), Gaps = 87/559 (15%)
Query: 14 SIQQH---------VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF--YIASD 62
S+QQH + TLL++C IQ+L Q+H+ ++ GL Q +I+ +S ++
Sbjct: 4 SLQQHCSATRSSACITTLLKACKRIQHLQQVHASIIQRGLEQDQVLISNFISLANTLSIS 63
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
++ +F+ + NPST +WN IR + +S ++ + +M + A P+ +TY ++
Sbjct: 64 TRSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIK 123
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC + G+ VHG V G ++F+ T LI+ Y G + AR VF+ + +R+VVS
Sbjct: 124 ACSGTCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVS 183
Query: 183 WNSILAGYVSCGD-------FDG------------------------ARRVFDEMPIRNV 211
W +++ GYV+ GD FDG AR VFD MP +NV
Sbjct: 184 WTAMVVGYVTAGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNV 243
Query: 212 VSWTTMIAGCA-------------------------------QKGRCKQALSLFGEMRRA 240
VS+TTM+ G A Q G +AL +F EM
Sbjct: 244 VSFTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESM 303
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
V GDLKL + + YV + + + +AL+ M A CG
Sbjct: 304 NVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDH----VISALVDMNAKCG 359
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ A ++F +MP+R VS+ SMI F+ G G++A+ LF M+ ++G+ PD
Sbjct: 360 NMERALKLFQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRML-----MEGIVPDEAAF 414
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+VL AC H+G +D+G + F SM +GISP +H+ CMVDLL R+G L +A+ LI++M
Sbjct: 415 TIVLTACSHSGLIDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMH 474
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
++PN WGAL+G C++ ++EL +V +L EL+ AA Y VLLSNIYA A RW+DV
Sbjct: 475 IEPNAGAWGALIGACKLQGDTELGEIVANRLF-ELEPQNAANY-VLLSNIYAAAGRWKDV 532
Query: 481 IAVRQKMI---EMGVKKPP 496
VR + + E+G+ P
Sbjct: 533 SLVRIQNVQNMEIGMSSCP 551
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 264/526 (50%), Gaps = 44/526 (8%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+ LL +C NI ++ Q+H+ ++NG + KLL FY+ + A+ LF +
Sbjct: 4 ESCLRLLYTCRNIFHIRQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPT 63
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
T W+ ++ G+++ +R+++ P+ +T F++ AC ++ G +
Sbjct: 64 RDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMI 123
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H +VL G + FV L++ YA C
Sbjct: 124 HDVVLKYGLVLDHFVCATLVDMYA-------------------------------KCAVI 152
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ AR++FD M +++V+WT MI GC ++L LF +R
Sbjct: 153 EDARKLFDVMVSKDLVTWTVMI-GCYADYDAYESLVLFDRLREEGFVSDKVAMVTVVNAC 211
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G + R+++ Y+ N V L A+I MYA CG + A +VF +M +++
Sbjct: 212 AKLGAMHRARFVNEYI-----CGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKN 266
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
+SW++MI A+ G GKEAL LF M+S G + P+ IT + +L AC H+G DEG
Sbjct: 267 VISWSAMIAAYGYHGKGKEALDLFHMMLSCG-----ISPNRITFVSLLYACSHSGLTDEG 321
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
F SM R +G+ P ++HY C+VDLL RAG LDEA LIE M ++ ++ LW ALLG C+
Sbjct: 322 LHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACR 381
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H N ELA V L+ EL Y VLLSNIYA A +W+ V R M + +KK P
Sbjct: 382 VHGNMELAGKVAESLL-ELQPKNPGIY-VLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVP 439
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
G +WI+++ + F GD +H S IYE+L+ +IK+ + Y PD
Sbjct: 440 GWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLTSVIKKLEMVGYVPD 485
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 264/500 (52%), Gaps = 47/500 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPSTTVWNHIIRGYAR 91
Q+ + ++ G Q TKLL + S L A +F I NP+T +N I+RG A+
Sbjct: 3 QLQAHLITTGKFQFHPSRTKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDYNAILRGLAQ 62
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
S P +S+ YR M+ + T SF L C R E Q+H VL G+ ++V +
Sbjct: 63 SSEPTQSISWYRDMLCCVQRVDALTCSFALKGCARALAFSEATQLHSQVLRFGFDADVLL 122
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
T L++ YA G + D AR+VFDEM R++
Sbjct: 123 LTTLLDVYAKTGFI-------------------------------DYARKVFDEMDKRDI 151
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
SW MI+G AQ R +A++LF M+ G LK G +H Y
Sbjct: 152 ASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRY 211
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQ 330
V + RN V + NA+I M+A CG + AY VF M ++S ++W +MIMAFA
Sbjct: 212 VLDEKLDRN-----VIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMN 266
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G +AL L M +DG PDA++ + LCAC HAG VDEG R+F M + G+
Sbjct: 267 GDGYKALDLLDRM-----SLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLM-KVSGVK 320
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
++HYG MVDLL RAG L EA+ +I +MP+ P+ LW +LLG C+ + N E+A + K
Sbjct: 321 LNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNVEMAEMASKK 380
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
LV E+ ++ ++G VLLSN+YA +RW+DV VR+ M++ V+K PG S+ +++G +H F
Sbjct: 381 LV-EMGSN-SSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSYTEVDGRIHKF 438
Query: 511 VAGDMTHKHSYFIYEILSEI 530
+ D +H +S IY L EI
Sbjct: 439 INYDQSHPNSKEIYAKLDEI 458
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G R V L +C+ + L + +H V+ L + + ++ + + A
Sbjct: 181 GWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKA 240
Query: 68 HKLFSTID-NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
+ +F ++ S WN +I +A + +K+++ +M P+ +Y L AC
Sbjct: 241 YSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNH 300
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ-RSVVSWNS 185
GL+ EG ++ ++ V G NV ++++ G +++A + + M VV W S
Sbjct: 301 AGLVDEGVRLFDLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQS 360
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
+L + G+ + A EM + +V + +G
Sbjct: 361 LLGACKTYGNVEMA-----EMASKKLVEMGSNSSG 390
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 255/483 (52%), Gaps = 21/483 (4%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ Y+ L A +LF + + WN +I GYAR ++ R++ +
Sbjct: 178 LMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQA----RRLFEESPVRD 233
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT++ ++ A V+ G+L E +V + K +I Y ++ AR +F+
Sbjct: 234 VFTWTAMVFAYVQSGMLDEARRVFDEMPGK----REMAYNVMIAGYVQYKKMDMARELFE 289
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
M R+V SWN+I++GY GD AR +FD M R+ VSW +IAG AQ G ++ + +
Sbjct: 290 AMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHM 349
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
+M+R L LG+ +H + + NAL+
Sbjct: 350 LVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQA-----VKTGYDNGCLVGNALL 404
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY CG IG+AY VF +M + +SW +M+ +A+ G G++AL +F +M + G
Sbjct: 405 EMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAG-----F 459
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+PD IT++ VL AC H G D G F SM++ +GI+P +HY CM+DLL RAG L+EAH
Sbjct: 460 KPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAH 519
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
L+ NMP +P+ A WGALLG +IH N+EL ++V ++ + A Y VLLSN+YA
Sbjct: 520 NLMRNMPFEPDAATWGALLGASRIHGNAELGEKA-AEMVFNMEPNNAGMY-VLLSNLYAT 577
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI-IK 532
+W DV +R KM ++G++K PG SW+++ +H F GD H IY L EI +K
Sbjct: 578 LGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLK 637
Query: 533 QSH 535
H
Sbjct: 638 MKH 640
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 175/410 (42%), Gaps = 43/410 (10%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T +S ++ + A ++F ++ + WN ++ GY ++ + + R + +
Sbjct: 52 TNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKN----RRLVDARNLFDLMPQ 107
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
+ +++ +LS VR G + E + V + K S L+ Y G +E+AR +
Sbjct: 108 KDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSIS----WNGLLAVYVQNGRLEEARRL 163
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F+ ++SWN ++ GYV ARR+FD MP+RN +SW TMI+G A+ G QA
Sbjct: 164 FESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQAR 223
Query: 232 SLFGE-----------MRRARVEX-XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI--V 277
LF E M A V+ ++ I YVQ + +
Sbjct: 224 RLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDM 283
Query: 278 ARN--QQQPSVRLN--NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
AR + P + N +I Y G I A ++F M QR VSW ++I +A+ G
Sbjct: 284 ARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHY 343
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
++ + + M DG + + T L C + G+++ +T G
Sbjct: 344 EKVMHMLVKMKRDGKSL-----NRSTFCCALSTCAGMAALVLGKQVHGQAVKT-GYDN-- 395
Query: 394 EHYGCMV-----DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
GC+V ++ + G + EA+ + E M LK + W +L G H
Sbjct: 396 ---GCLVGNALLEMYCKCGSIGEAYDVFERMQLK-DIISWNTMLAGYARH 441
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 61/302 (20%)
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
N+F ++ Y + AR++FD M Q+ VSWN +L+GYV G D A+ VFD M
Sbjct: 77 KNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNM 136
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
P ++ +SW ++A Q GR ++A LF ++V D +L
Sbjct: 137 PYKDSISWNGLLAVYVQNGRLEEARRLF----ESKV------------------DWELIS 174
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
W N L+ Y ++GDA ++F MP R+ +SW +MI
Sbjct: 175 W----------------------NCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISG 212
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+A+ G +A LF+ VR D T ++ A +G +DE RR+F M
Sbjct: 213 YARDGDLLQARRLFEE--------SPVR-DVFTWTAMVFAYVQSGMLDEARRVFDEMP-- 261
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
R Y M+ + +D A L E MP + N W ++ G +N ++A
Sbjct: 262 ---GKREMAYNVMIAGYVQYKKMDMARELFEAMPCR-NVGSWNTIISG--YGQNGDIAQA 315
Query: 447 VE 448
E
Sbjct: 316 RE 317
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 261/494 (52%), Gaps = 18/494 (3%)
Query: 13 RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
+ I+ + LL + +L QIH+ + +GL I++ +S + Q+ +A +F+
Sbjct: 6 QKIESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFN 65
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLR 131
+P+ ++N II+ ++ +S + M T P+ FT+ LL A LR
Sbjct: 66 HTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKAT---SYLR 122
Query: 132 E---GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ G+ +H V G+ + VE L+ Y+ G +E A VFD M R VV WN ++
Sbjct: 123 DYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMIN 182
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G+ GD + ++F M R+VVSW MI+ AQ+ + +A +F EM E
Sbjct: 183 GFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDAT 242
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
GD+ G WIH Y + + R + + N+L+ Y CG + A++V
Sbjct: 243 LVTVLPVCARLGDVDAGEWIHSYADGKGLLRK----VISVGNSLVDFYCKCGNLEAAWKV 298
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F +M +++ VSW +MI G G+ + LF+ M G V P T + VL C
Sbjct: 299 FNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKG-----VTPSDSTFVGVLACCA 353
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
HAGFVD+GR IF SM + +SP++EHYGC+VDLL R G + EA+ LI NMPL PN ALW
Sbjct: 354 HAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALW 413
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
GALL C+ H + E+A + +LV L+ G +G VLLSN+YA ++W +V VR M
Sbjct: 414 GALLSACRTHGDREVAEIAAKELV-RLEP-GNSGNYVLLSNVYAEERKWNEVEKVRVLMQ 471
Query: 489 EMGVKKPPGQSWIQ 502
+G+KK PGQS +Q
Sbjct: 472 GVGIKKNPGQSALQ 485
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 274/533 (51%), Gaps = 52/533 (9%)
Query: 48 TNII--TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM 105
+N+I +L++ Y+ S + A ++F + STT WN I+ +A+ H + E RQ+
Sbjct: 38 SNVIASNQLIASYVRSGDIDSALRVFHNMTVISTTTWNTILGAFAKKH---GNFERARQL 94
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
EPN +Y+ +L+ + + + V+ S +++ YA +
Sbjct: 95 FDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTAS----WNTMLSGYAQVRMM 150
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI------- 218
++AR + M +++ V+W+++++GYV+CGD D A F P+++V++WT MI
Sbjct: 151 DEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFG 210
Query: 219 ------------------------AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
AG GR + L LF M V+
Sbjct: 211 RVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLL 270
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G+ +H V + ++R+ + +LI MY+ CG + D++ +F ++P+
Sbjct: 271 GCSDLSALQTGKQVHQLVCKSPLSRDTTAVT-----SLISMYSKCGDLKDSWDLFVQIPR 325
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ V+W +MI +A+ G G++AL LF M ++PD IT + VL AC HAG VD
Sbjct: 326 KDVVTWNAMISGYAQHGAGEKALHLFDEMKKSE-----IKPDWITFVAVLLACNHAGMVD 380
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G + F SM + +GI R EHYGCMVDLL RAG L EA ++++MP KP+ A++G LLG
Sbjct: 381 LGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGA 440
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C+IHK+ +A L+ ELD A GY V L+N+YA +W+ V VR+ M E V K
Sbjct: 441 CRIHKSMHMAEFAAKNLL-ELDPTSATGY-VQLANVYAAQSKWEHVARVRKSMKENNVVK 498
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
PPG SWI+IN VH+F + D H I+E L ++ + + Y PD+ A
Sbjct: 499 PPGYSWIEINNAVHEFRSNDRLHPELVSIHEKLDKLETKMKLAGYVPDLEFAL 551
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L C+++ L Q+H V + LS+ T +T L+S Y L+ + LF I
Sbjct: 267 SVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRK 326
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
WN +I GYA+ K++ + +M +E +P+ T+ +L AC G++ G +
Sbjct: 327 DVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTK 384
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 276/522 (52%), Gaps = 25/522 (4%)
Query: 22 LLQSCNNI-----QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
LL++C N+ Q Q+H V+ NG + LL+FY + +A+K+F
Sbjct: 122 LLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFV 181
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+N +I G+AR + +M P+ +T+ LLS C R G QV
Sbjct: 182 RDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQV 241
Query: 137 HGIVLVKGYC--SNVFVETNLINFYAGRGGVEQARHVFDGM--GQRSVVSWNSILAGYVS 192
HG+V + C NV + L++ YA G + A V + G+ V +W S+++ Y
Sbjct: 242 HGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYAL 301
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G+ ARR+FD+M R+VVSWT MI+G + G ++AL LF ++ ++
Sbjct: 302 RGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAA 361
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR--LNNALIHMYASCGVIGDAYQVFT 310
G L+LGR IH R A S+ +A++ MYA CG I A VF
Sbjct: 362 LSACARLGALELGRRIH-----RQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFR 416
Query: 311 KMP--QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
K +++T + S+I A G G+ A LF+ M G+ G++PD IT + VL AC
Sbjct: 417 KTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEM-----GLLGLKPDNITFVAVLSACG 471
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H G VD G+++F SM +G+SP +EHYGCMVDLL RAG LDEAH LI MP K N +W
Sbjct: 472 HCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIW 531
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
ALL C++H + LA V +LV EL D AGY V+LSN+ + + + ++R+ +
Sbjct: 532 RALLSACKVHGDVALARVASYELV-ELQHDHGAGY-VMLSNMLSDTDQHDEAASLRKAID 589
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
+G++KPPG S++++N +H F+AGD +H + +L +I
Sbjct: 590 NVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLRDI 631
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 213/443 (48%), Gaps = 26/443 (5%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFY---IASDQLQHAHKLFS 72
+ + +LL SC +Q QI++ +++ G ++ T L +FY +S L H+H LF+
Sbjct: 14 NERIKSLLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFT 73
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWK-SVECYRQMVSTEAEPNGFTYSFLLSAC--VRGGL 129
I NP +WN II+ Y++ H+P + ++ M+++ P+ FT+ FLL AC V
Sbjct: 74 QITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISA 133
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
+ G QVH VL G+ S+VFV L+NFY G G V A VFD R VS+N+++ G
Sbjct: 134 PQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMING 193
Query: 190 YVSCGDFDGARRVFDEMP---IR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+ GD G RVF EM +R + ++ +++GC+ + + G + R E
Sbjct: 194 FARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYR---ELG 250
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
K GR + +V + V +L+ YA G + A
Sbjct: 251 CFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKS--VVAAWTSLVSAYALRGEVKVA 308
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
++F +M +R VSWT+MI ++ G +EAL LF + +G G++PD + ++ L
Sbjct: 309 RRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKL--EGL---GMKPDEVAVVAALS 363
Query: 366 ACCHAGFVDEGRRI---FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP-L 421
AC G ++ GRRI +A N W S +VD+ ++ G +D A +
Sbjct: 364 ACARLGALELGRRIHRQYAGEN--WTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDD 421
Query: 422 KPNDALWGALLGGCQIHKNSELA 444
K L+ +++ G H E A
Sbjct: 422 KKTTFLYNSIISGLAHHGRGEYA 444
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 260/509 (51%), Gaps = 43/509 (8%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+ IHS V G + T ++ FY L+ A K+F + + W +I G
Sbjct: 124 VMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEF 183
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++V+ +R ++ + P+GF +L AC R G L G + + G NVFV
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA 243
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
T+L++ Y CG + AR VFD M +++V
Sbjct: 244 TSLVDMYT-------------------------------KCGSMEEARFVFDGMVEKDIV 272
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
W+ MI G A G ++A+ LF EMR+ V G L+LG W
Sbjct: 273 CWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNW----- 327
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ ++ + + L +LI YA CG + +A V+ M ++ V + ++I A G
Sbjct: 328 AKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQ 387
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A G+F M G G+ P+ T + +LC C HAG VD+GR F SM+ + ++P
Sbjct: 388 VGAAFGVFGQM-----GKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPT 442
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
IEHYGCMVDLL+RAGFLDEAH LI+ MP+K N +WG+LLGGC++H+ ++LA V +L+
Sbjct: 443 IEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI 502
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
EL+ +G+ VLLSNIY+ ++RW + +R + E G++K PG SW++++GVVH+F+
Sbjct: 503 -ELEP-WNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLV 560
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
GD +H S IYE L + K Y P
Sbjct: 561 GDTSHPLSQKIYEKLESLFKDLKEAGYNP 589
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 186/405 (45%), Gaps = 45/405 (11%)
Query: 36 HSQVVLNGLSQKTNIITKLLSFYIA-SDQLQHAHKLF-STIDNPSTTVWNHIIRGYARSH 93
H +++ L ++++ +L I S+ Q+ +F T N +T ++N +IRG
Sbjct: 24 HCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKD 83
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+V Y M P+ FT+SF+L AC R L G +H +V G+ +VFV+T
Sbjct: 84 RFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKT 143
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
N++ FY+ G + A VFD M ++VVSW
Sbjct: 144 NVVCFYSKCGFLRDAWKVFDDMVVKNVVSW------------------------------ 173
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
T MI GC + G+ ++A+ LF + + + GDL+ GRWI ++
Sbjct: 174 -TGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMR 232
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ ++RN V + +L+ MY CG + +A VF M ++ V W++MI +A GL
Sbjct: 233 ECGLSRN-----VFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLP 287
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+EA+ LF M VRPD ++ L +C G ++ G MN +S +
Sbjct: 288 REAIELFFEMRK-----VNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPV 342
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++D ++ G ++EA G+ + M K + ++ A++ G ++
Sbjct: 343 LGTS-LIDFYAKCGSMEEALGVYKMMKEK-DRVVFNAVISGLAMY 385
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 238/433 (54%), Gaps = 18/433 (4%)
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG 144
II +++ ++ + +M+++ PN FT+ +L+ R G + G+Q+HG +
Sbjct: 131 IITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTS 190
Query: 145 YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
CSNVFV + L++ Y +E+A+ F+ +VVS+ +++ GY+ G F+ A RVF+
Sbjct: 191 LCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFN 250
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL 264
EMP RNV+SW M+ GC++ G ++A+ F +M R L
Sbjct: 251 EMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGF 310
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMI 324
GR H + + N + N+LI YA CG + D+ +F K+ +R+ VSW ++I
Sbjct: 311 GRSFHACAIKFLGKLND-----FVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVI 365
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
+A G G EA+ LF+ M S +G++P+ ++L+ +L AC HAG VDEG F N
Sbjct: 366 CGYAHNGRGAEAISLFERMCS-----EGIKPNKVSLLGLLLACNHAGLVDEG---FLYFN 417
Query: 385 RTWGISPRI---EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNS 441
+ SP + EHY CMVDLL+R+G EA I MP P W A+LGGCQIH N
Sbjct: 418 KARIESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNI 477
Query: 442 ELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
EL + ++A LD D + Y V++SN ++ A RW DV +R ++ E G+K+ PG SWI
Sbjct: 478 ELGELAAKNILA-LDPDDVSSY-VMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWI 535
Query: 502 QINGVVHDFVAGD 514
++ G VH F+ D
Sbjct: 536 EVKGKVHAFLKAD 548
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T L+ Y+ S + + A ++F+ + + WN ++ G ++ ++V+ + M+
Sbjct: 230 TTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFI 289
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN T+ +SA L G H + N FV +LI+FYA G ++ + +
Sbjct: 290 PNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLI 349
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRC 227
FD + +R+VVSWN+++ GY G A +F+ M N VS ++ C G
Sbjct: 350 FDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLV 409
Query: 228 KQALSLFGEMRRARVE 243
+ F +AR+E
Sbjct: 410 DEGFLYFN---KARIE 422
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 38/268 (14%)
Query: 196 FDGARRVFDEMP-IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
FD A +FDEMP + V T +I +++ R + A+ LF M + +
Sbjct: 109 FDVACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLN 168
Query: 255 XXXXXGDLKLGRWIH--------------------WYVQQRIVARNQ------QQPSVRL 288
G + +G+ IH YV+ + Q + P+V
Sbjct: 169 TSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVS 228
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
LI Y G DA +VF +MP+R+ +SW +M+ +K G +EA+ F M+
Sbjct: 229 YTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLR--- 285
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY--GCMVDLLSRA 406
+G P+ T + A + + GR A + G ++ + ++ ++
Sbjct: 286 --EGFIPNESTFPCAISAASNIASLGFGRSFHACAIKFLG---KLNDFVGNSLISFYAKC 340
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGG 434
G + ++ LI + K N W A++ G
Sbjct: 341 GSMKDSL-LIFDKICKRNVVSWNAVICG 367
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 174/520 (33%), Positives = 263/520 (50%), Gaps = 44/520 (8%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS--DQLQHAHKL-FS 72
+Q LL S ++I L Q+ +Q+ LN L T+I+++L+ F+ S L HA KL F
Sbjct: 10 KQQCLNLLNSLHSITKLHQLQAQIHLNSLHNDTHILSQLVYFFSLSPFKNLSHARKLVFH 69
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+NPS WN +IRGYA S +P +S+ +++M +PN TY F+ +C +L E
Sbjct: 70 FSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCE 129
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+QVH ++ G S+V+V N+INFY
Sbjct: 130 GKQVHADLVKFGLDSDVYVCNNMINFYG-------------------------------C 158
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
C AR+VFDEM +R +VSW +++ C + + F +MR E
Sbjct: 159 CKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLL 218
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L LGRW+H Q I+ SV L AL+ MY G +G A VF +M
Sbjct: 219 LSVCAELGYLSLGRWVH---SQLIL--KGMVLSVHLGTALVDMYGKSGALGYARVVFERM 273
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+R+ +W++MIM A+ G +EAL LF M + + + P+ +T + VLCAC HAG
Sbjct: 274 EKRNVWTWSAMIMGLAQHGFAEEALVLFDMM--NDKKSNNISPNYVTYLGVLCACSHAGM 331
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
VDEG R F M GI P + HYG MVD+L RAG L EA+ I++MP P+ +W LL
Sbjct: 332 VDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLL 391
Query: 433 GGCQIHKNSELASVVEP--KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
C +H + + + K + E++ G LV+++N+YA W+ VR+ M +
Sbjct: 392 SACTVHDVCDRTGIGDKVRKRLLEMEPK-RGGNLVIVANMYAEVGNWEKAANVRRVMRDG 450
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
G+KK G+S + + G ++ F AG + +Y++L +
Sbjct: 451 GLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDLLDAL 490
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 276/529 (52%), Gaps = 20/529 (3%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS----DQLQHAHK 69
S + LL+ C ++++L Q H+QV GL T ++++L+F + + L +A +
Sbjct: 3 SSTKRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACR 62
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F I NP+ ++N +I+ + ++ +++ + +M+ +E +P+ +T ++L AC
Sbjct: 63 VFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHD 122
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G+ +HG G +++V +L+ Y G V AR+VFD + +VVSW+ +++G
Sbjct: 123 CSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISG 182
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y GD D AR FDE P ++ W MI+G Q K++L LF M+ +
Sbjct: 183 YAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIF 242
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQ-RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L++G WIH ++ Q ++V SVRL+ +L+ MYA CG + A ++
Sbjct: 243 VSILSACAHLGALEIGVWIHQHLNQLKLVPL-----SVRLSTSLLDMYAKCGNLELAKRL 297
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F M R V W +MI A G GK AL LF M GV+PD IT I V AC
Sbjct: 298 FDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEK-----VGVKPDDITFIAVFTACS 352
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA-- 426
++G EG + M + I P+ EHYGC+VDLLSRAG +EA +I + N +
Sbjct: 353 YSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEE 412
Query: 427 --LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
W A L C H ++LA + K V +LD +G VLLSN+YA + + D VR
Sbjct: 413 TLAWRAFLSACCNHGETQLAELAAEK-VLQLDNHIHSGVYVLLSNLYAASGKHSDARRVR 471
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
M G K PG S ++I+GV+ +F+AG+ TH I+ +L ++ Q
Sbjct: 472 DMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVLKKMHMQ 520
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 273/521 (52%), Gaps = 21/521 (4%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+F L + + Q H++++L+G SQ I L +++ L ++ +F++I + +
Sbjct: 11 IFPSLPKQPTLNQIKQTHAKIILSGQSQSRLTIHILSLLSLSTSPLNYSLSIFNSISSQT 70
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGL---LREGE 134
+N IIR +A+S++ + + N T++FLL AC +G + G
Sbjct: 71 VLAFNSIIRIHAKSNSSPSNSLSLYSSMRRRFLNANQHTFTFLLHACTKGKDCFNIVSGV 130
Query: 135 QVHGIVLVKGYCSNVFVETNLINFY-AGRGGVEQARHVFDGMGQR---SVVSWNSILAGY 190
QVH V+ GY NVFV LI+FY G E A+ VF+ VV+WNS+LAG
Sbjct: 131 QVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGL 190
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
V G+ A ++FDEMP R+VVSW++MI G Q G+ + L F MR +
Sbjct: 191 VRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILV 250
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L GR++H ++ + + SV + L+ MYA CG I ++ +F
Sbjct: 251 TMLSASAQLGLLGWGRFVHSTIESL-----RFRISVAIGTGLVDMYAKCGCIEESRDLFD 305
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
M +R +WT MI A KEAL LF+ + +G RP + + VL AC A
Sbjct: 306 GMMERDIWTWTVMICGLASHDRAKEALVLFREFIREG-----FRPVNVIFVGVLNACSRA 360
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V EGR F M +GISP +EHYGCMVDL +RAG +DEA LIE M ++P+ +W
Sbjct: 361 GLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWAT 420
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+IH E+ + KL+ T G+ V L+ IYA +++W DV+ VR+ M+E
Sbjct: 421 LLDACEIHGFVEMGEKIGNKLIKMDPTHD--GHYVQLAGIYAKSRKWDDVVRVRRLMVER 478
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEII 531
K G S I++ VH FVAGD H HS IY++L EII
Sbjct: 479 VPIKVAGWSLIEVEDRVHRFVAGDRDHDHSSDIYKML-EII 518
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 167/454 (36%), Gaps = 124/454 (27%)
Query: 16 QQHVFTLL-------QSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFY---------- 58
QH FT L + C NI + +Q+H VV G + + L+ FY
Sbjct: 106 NQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYA 165
Query: 59 ----------IASD---------------QLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+ SD +++ A K+F + W+ +I GY ++
Sbjct: 166 KRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNG 225
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+EC+R M PN +LSA + GLL G VH + + +V + T
Sbjct: 226 KLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGT 285
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ YA G +E++R +FDGM +R + W +
Sbjct: 286 GLVDMYAKCGCIEESRDLFDGMMERDI--W-----------------------------T 314
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT MI G A R K+AL LF E R G + GR +Y +
Sbjct: 315 WTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGR---YYFK 371
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ D Y + +M + M+ FA+ GL
Sbjct: 372 LMV---------------------------DGYGISPEMEH-----YGCMVDLFARAGLI 399
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EA+ L +TM V PD + +L AC GFV+ G +I N+ + P
Sbjct: 400 DEAVRLIETMT--------VEPDPVMWATLLDACEIHGFVEMGEKI---GNKLIKMDPTH 448
Query: 394 E-HYGCMVDLLSRAGFLDEA----HGLIENMPLK 422
+ HY + + +++ D+ ++E +P+K
Sbjct: 449 DGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIK 482
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 257/486 (52%), Gaps = 16/486 (3%)
Query: 22 LLQSCNNIQNL--IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
LL++C I N+ +H++V+ G + L+ Y +L A K+F +
Sbjct: 83 LLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDL 142
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN +I GY R + + + +M + + + T ++ AC G + +
Sbjct: 143 VSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEY 202
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
+ +V++ LI+ Y R V+ AR VFD M R++VSWN+++ GY G+ A
Sbjct: 203 IEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAA 262
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
R++FD+MP R+V+SWT+MI+ +Q G+ +A+ LF EM +V+
Sbjct: 263 RKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHI 322
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
G L +G +H Y+++ V + + NALI MY CG + VF +M +R +VS
Sbjct: 323 GALDVGEAVHEYIRKYDV-----NADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVS 377
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
WTS+I A G AL LF M+ +G VRP T + VL AC HAG VD+G
Sbjct: 378 WTSVIAGLAVNGSADSALNLFSLMLREG-----VRPTHGTFVGVLLACAHAGVVDKGLEY 432
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F SM R +G++P ++HYGC+VDLLSR+G L A+ I+ MP+ P+ +W LL Q+H
Sbjct: 433 FESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHG 492
Query: 440 NSELASVVEPKLVAELDTDGA-AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N LA + KL L+TD + +G +L SN YA + RW+DVI +R+ M E V KP
Sbjct: 493 NLHLAEIATKKL---LETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSAS 549
Query: 499 SWIQIN 504
S ++IN
Sbjct: 550 SSVEIN 555
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 21/404 (5%)
Query: 45 SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQ 104
+ +I L S+ ++ + A++LF I P+ + WN +IRG+++++ P +++ Y
Sbjct: 8 TDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNL 67
Query: 105 MVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGG 164
M S N TY FLL AC R + VH VL G+ S++FV LI+ YAG
Sbjct: 68 MYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCE 126
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAG 220
+ AR VFD M +R +VSWNS++ GY C + VF+EM + +V V+ ++
Sbjct: 127 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 186
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
C G ++ + +VE + L R R+ R
Sbjct: 187 CTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLAR--------RVFDRM 238
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
+ + V NA+I Y G + A ++F MP R +SWTSMI ++++ G +A+ LF
Sbjct: 239 RDRNMVSW-NAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLF 297
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
+ M+ V V+PD IT+ VL AC H G +D G + + R + ++ I ++
Sbjct: 298 QEMM-----VTKVKPDEITVASVLSACAHIGALDVGEAVHEYI-RKYDVNADIYVGNALI 351
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
D+ + G +++ + E M K + W +++ G ++ +++ A
Sbjct: 352 DMYCKCGAVEKGLSVFEEMG-KRDSVSWTSVIAGLAVNGSADSA 394
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 259/496 (52%), Gaps = 45/496 (9%)
Query: 51 ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
T L++ Y++ L A +LF I WN +I GY +S +++ C+ +M
Sbjct: 200 FTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
Query: 111 EPNGFTYSFLLSAC--VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
PN T +LSAC R G L G+ + V G+ SN+ + LI+ Y
Sbjct: 260 LPNKSTMVVVLSACGHTRSGEL--GKWIGSWVRDNGFGSNLQLTNALIDMYC-------- 309
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
CG+ D AR +FD + ++V+SW TMI G + +
Sbjct: 310 -----------------------KCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYE 346
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
+AL+LF M R+ V+ G L LG+W+H Y+ + + RN S L
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL--RNSSNAS--L 402
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+LI MYA CG I A +VF M R+ SW +M+ FA G + AL LF MV+ G
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
RPD IT + VL AC AG VD G + F SM + +GISP+++HYGCM+DLL+RA
Sbjct: 463 ----FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEK 518
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
+EA L++NM ++P+ A+WG+LL C+ H E V +L +L+ + AG VLLS
Sbjct: 519 FEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF-QLEPEN-AGAFVLLS 576
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILS 528
NIYA A RW DV +R ++ + G+KK PG + I+I+G VH+F+ GD H IY++L+
Sbjct: 577 NIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLN 636
Query: 529 EIIKQSHVDSYEPDIT 544
E+ K + + P+ +
Sbjct: 637 EVDKLLEENGFVPNTS 652
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 237/467 (50%), Gaps = 37/467 (7%)
Query: 3 IERFVPASG--RRSIQQHVF-TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI 59
I F+PAS + ++QH + LL+ C NI QIHS ++ GL+ + +KL+ F
Sbjct: 12 ILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCA 71
Query: 60 AS--------------DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM 105
S +Q H H +F +WN +IRGY+ S +P S+ + +M
Sbjct: 72 VSPSGDLSYALSLFEENQQHHKHNVF---------IWNSLIRGYSLSSSPLSSLHLFSRM 122
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
+ +PN T+ FL +C + EG+Q+H L N V T++I+ YA G +
Sbjct: 123 LYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEM 182
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKG 225
+ AR VFD R VS+ +++ GYVS G D ARR+FDE+P+++VVSW MI+G Q G
Sbjct: 183 DFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSG 242
Query: 226 RCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
R ++A+ F EM+ A V +LG+WI +V+ N Q
Sbjct: 243 RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQ--- 299
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
L NALI MY CG A ++F + ++ +SW +MI ++ L +EAL LF+ M+
Sbjct: 300 --LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLR 357
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
V+P+ +T + +L AC G +D G+ + A +++ S + ++D+ ++
Sbjct: 358 -----SNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAK 412
Query: 406 AGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
G ++ A + +M + N A W A+L G +H ++E A + ++V
Sbjct: 413 CGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAERALALFSEMV 458
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 285/533 (53%), Gaps = 29/533 (5%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSF-YIASDQLQHAHKL 70
+R++ + V T+L N++ L Q+ S + G SQ KL+ F + L +AH++
Sbjct: 2 KRNLNELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQI 61
Query: 71 FSTIDNPSTTVWNHIIRGYA-RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
F+ I +P+ ++ II ++ + HT +K ++ M+++ PN F Y +L + L
Sbjct: 62 FNHIHSPNIYLFTAIITAFSSQQHTTFK---LFKTMLNSNIRPNNFIYPHVLKSVKERFL 118
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAG-RGGVEQARHVFDGMGQRSVVSWNSILA 188
+ + VH ++ G+ + VET+L++ Y+ GG+ A VFD M +R++V + +++
Sbjct: 119 V---DLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVS 175
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR------- 241
GY+ GD + VFDEM R+V +W +I+GC Q G + + LF EM A
Sbjct: 176 GYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGF 235
Query: 242 ---VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ G L+LG+WIH YV + + ++NAL+ MY
Sbjct: 236 CKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDS-----FVSNALVDMYGK 290
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG + A +VF ++ SW SMI +A G ++A+ F+ MV G GV RPD +
Sbjct: 291 CGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGV---RPDEV 347
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T I +L AC H G V++G F M + +GI P+I HYGC++DLL RAG DEA +++
Sbjct: 348 TFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKG 407
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
M ++P++ +WG+LL GC++H ++LA KLV E+D GY +L+NIY +W
Sbjct: 408 MSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLV-EIDPHN-GGYGTMLANIYGQLGKWD 465
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEII 531
++ V K+ + K PG SWI+++ VH F + D ++ + +Y IL +
Sbjct: 466 EMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESLF 518
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 260/488 (53%), Gaps = 18/488 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH+ V GL + + Y ++ KLF I + WN +I G +
Sbjct: 124 KIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCR 183
Query: 94 TPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++VE +++M V + + + T L+AC + G+++HG ++ K + +
Sbjct: 184 RFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMG 243
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
L++ Y G V AR +FDGM +++V W S++ GYVSCG+ D AR +FD+ P R+VV
Sbjct: 244 NALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVV 303
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
WT MI G Q R +A++LF EM+ V+ G L+ GRWIH YV
Sbjct: 304 LWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYV 363
Query: 273 QQ-RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
++ RIV + +LI MYA CG + + +VF + ++ T SWTS+I A G
Sbjct: 364 RENRIVV------DAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG 417
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
EAL LF+ M + G +PD +T IV+L AC H G V+EG ++F SM+ +GI P
Sbjct: 418 KTIEALELFEEM-----KIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEP 472
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND---ALWGALLGGCQIHKNSELASVVE 448
+EHYGC +DLL RAG L EA LI+ +P + N+ A++G+ L C+ + N+++ +
Sbjct: 473 NLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIA 532
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
L E + LL++IYA A RW+D R KM ++ ++K PG S I+++G +
Sbjct: 533 TAL--EKVKSSDSSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAIEVDGSGN 590
Query: 509 DFVAGDMT 516
GD +
Sbjct: 591 QGGVGDFS 598
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 22/373 (5%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH---KLF 71
++ + +LL++C +I +L QIHS + GL Q T+ + KL S I + + H +F
Sbjct: 1 MKGRLISLLKNCKSIFHLQQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIF 60
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ +PS ++N +I+ + + ++ + + Q+ P+ +TY F+L A R
Sbjct: 61 NHTLHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFR 120
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
+G ++H V G S+ +V + ++ YA G ++ R +FD + +R VSWN +++G V
Sbjct: 121 QGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCV 180
Query: 192 SCGDFDGARRVFDEMPI--RNVVSWTTMIA---GCAQKGRCKQALSLFGEMRRARVEXXX 246
C F+ A VF M + +S T+++ CA + + G + ++
Sbjct: 181 KCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTM 240
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
G + + R I ++ +N V +++ Y SCG + A
Sbjct: 241 RMGNALLDMYCKCGYVSVAREIF----DGMIEKN-----VNCWTSMVTGYVSCGELDKAR 291
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+F K P R V WT+MI + + EA+ LF+ M V GV+PD ++ +L
Sbjct: 292 DLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEM-----QVRGVKPDKFIVVALLTC 346
Query: 367 CCHAGFVDEGRRI 379
C G ++ GR I
Sbjct: 347 CAQLGTLEHGRWI 359
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 274/543 (50%), Gaps = 48/543 (8%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R++ A G Q T+L +C+++ Q+H +V +G + + L+ Y
Sbjct: 225 RYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKC 284
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
L++A + T+++ WN ++ G+ R +++ ++ M + + +T+ +L
Sbjct: 285 GDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVL 344
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
+ CV G + + VHG+++ G+ + V L++ YA
Sbjct: 345 NCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYA--------------------- 381
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
GD D A VF++M ++V+SWT+++ G AQ +++L +F +MR
Sbjct: 382 ----------KTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 431
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V L+ G+ +H + + +Q + N+L+ MYA CG
Sbjct: 432 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS-----VYNSLVAMYAKCGC 486
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ DA +F M + ++WT++I+ +A+ G G+ +L + MVS G RPD IT I
Sbjct: 487 LDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSG-----TRPDFITFI 541
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+L AC HAG VDEGR+ F MN+ +GI P EHY CM+DL R+G LDEA L++ M +
Sbjct: 542 GLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDV 601
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
KP+ +W +LL C++H+N ELA L EL+ A Y V+LSN+Y+ +++W DV
Sbjct: 602 KPDATVWKSLLSACRVHENLELAERAATNLF-ELEPMNAMPY-VMLSNMYSASRKWNDVA 659
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
+R+ M G+ K PG SW++IN V+ F++ D H IY + EII + Y P
Sbjct: 660 KIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVP 719
Query: 542 DIT 544
D++
Sbjct: 720 DMS 722
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 162/381 (42%), Gaps = 43/381 (11%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
++S Y+ +L A +LF S+ W+ II GY + ++ + +R M + +
Sbjct: 73 MISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKAS 132
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT +L C GL++ GE +HG V+ G+ NVFV T L++ YA V +A +F
Sbjct: 133 QFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFK 192
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
G+ E +N V WT M+ G AQ G +A+
Sbjct: 193 GL-----------------------------EFDRKNHVLWTAMVTGYAQNGDGYKAVEF 223
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F M VE G +H ++ + N V + +AL+
Sbjct: 224 FRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN-----VYVQSALV 278
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MYA CG + +A + M VSW S+++ F + GL +EAL LFK M +D
Sbjct: 279 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDD- 337
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
T VL CC G ++ + + + +T G +VD+ ++ G +D A+
Sbjct: 338 ----YTFPSVL-NCCVVGSINP-KSVHGLIIKT-GFENYKLVSNALVDMYAKTGDMDCAY 390
Query: 414 GLIENMPLKPNDALWGALLGG 434
+ E M L+ + W +L+ G
Sbjct: 391 TVFEKM-LEKDVISWTSLVTG 410
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 16/300 (5%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
+++ L+N + G V AR +FD M Q+ SWN++++ YV+ G AR +FD
Sbjct: 35 SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 94
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
++ ++W+++I+G + G +A LF MR + G ++ G
Sbjct: 95 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEM 154
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT--KMPQRSTVSWTSMIM 325
IH + V +N + +V + L+ MYA C + +A +F + +++ V WT+M+
Sbjct: 155 IHGF-----VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 209
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+A+ G G +A+ F+ M GV + T +L AC G ++ + +
Sbjct: 210 GYAQNGDGYKAVEFFRYM-----HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVK 264
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSELA 444
+ G + +VD+ ++ G L A ++E M + +D + W +L+ G H E A
Sbjct: 265 S-GFGSNVYVQSALVDMYAKCGDLKNAKNMLETM--EDDDVVSWNSLMVGFVRHGLEEEA 321
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 254/486 (52%), Gaps = 20/486 (4%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ ++ +L A LF + WN +I GYA+ + R++ +
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQG----GGLSQARRLFDESPTRD 265
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT++ ++S V+ G+L E + + K N +I Y ++ AR +F+
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFE 321
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
M R++ SWN+++ GY GD AR+ FD MP R+ VSW +IAG AQ G ++AL++
Sbjct: 322 SMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNM 381
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F E+++ L+LG+ IH + + NAL+
Sbjct: 382 FVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQA-----VKMGYGTGCFVGNALL 436
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY CG I +A F + ++ VSW +M+ +A+ G G++AL +F++M + G V
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAG-----V 491
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+PD IT++ VL AC H G +D G F SM + +G+ P +HY CM+DLL RAG L+EA
Sbjct: 492 KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ 551
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
LI NMP +P A WGALLG +IH N+EL ++V +++ + Y VLLSN+YA
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKA-AEMVFKMEPQNSGMY-VLLSNLYAA 609
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
+ RW D +R KM ++GV+K PG SW+++ +H F GD +H IY L E+ +
Sbjct: 610 SGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLK 669
Query: 534 SHVDSY 539
+ Y
Sbjct: 670 MREEGY 675
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 185/442 (41%), Gaps = 76/442 (17%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
K +S ++ + A +F+T+ S+ +N +I GY R+ R + E
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN----SKFNLARNLFDQMPE 108
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
+ F+++ +L+ VR L + ++ ++ K +V +L++ YA G V++AR V
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK----DVVSWNSLLSGYAQNGYVDEAREV 164
Query: 172 FDGMGQRSVVSWNSILAGYVSCG-------------DFD------------------GAR 200
FD M +++ +SWN +LA YV G D+D AR
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDAR 224
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV------------EXXXXX 248
+FD+MP+R+ +SW TMI+G AQ G QA LF E V
Sbjct: 225 WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDE 284
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRI--VARN--QQQPSVRLN--NALIHMYASCGVI 302
++ I YVQ + +AR + P ++ N +I Y G I
Sbjct: 285 AKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDI 344
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
A + F MPQR VSW ++I +A+ G +EAL +F + DG ++ T
Sbjct: 345 AQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRA-----TFGC 399
Query: 363 VLCACCHAGFVDEGRRIFA-SMNRTWGISPRIEHYGCMVD-----LLSRAGFLDEAHGLI 416
L C ++ G++I ++ +G GC V + + G +DEA+
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGT-------GCFVGNALLAMYFKCGSIDEANDTF 452
Query: 417 ENMPLKPNDALWGALLGGCQIH 438
E + K + W +L G H
Sbjct: 453 EGIEEK-DVVSWNTMLAGYARH 473
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 129/313 (41%), Gaps = 76/313 (24%)
Query: 156 INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWT 215
I+ + G + A HVF+ M +RS VS+N++++GY+ F+ AR +FD+MP R++ SW
Sbjct: 56 ISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWN 115
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
M+ G + R A LF M V + W
Sbjct: 116 VMLTGYVRNCRLGDARRLFDLMPEKDV-------------------------VSW----- 145
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
N+L+ YA G + +A +VF MP+++++SW ++ A+ G +E
Sbjct: 146 --------------NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
Query: 336 ALGLF--------------------KTMVSDGAGVDGVRP--DAITLIVVLCACCHAGFV 373
A LF K + D + P DAI+ ++ G +
Sbjct: 192 ACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGL 251
Query: 374 DEGRRIFASMNRTWGISPR--IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+ RR+F SP + + MV + G LDEA + MP K N+ + A+
Sbjct: 252 SQARRLFDE-------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK-NEVSYNAM 303
Query: 432 LGGCQIHKNSELA 444
+ G K ++A
Sbjct: 304 IAGYVQTKKMDIA 316
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 10/225 (4%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L +C +I L QIH Q V G + LL+ Y + A+ F I+
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG-EQVHG 138
WN ++ GYAR +++ + M + +P+ T +LSAC GLL G E +
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYS 520
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFD 197
+ G T +I+ G +E+A+ + M Q SW ++L G+ +
Sbjct: 521 MTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTE 580
Query: 198 ----GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
A VF +M +N + + A GR A + +MR
Sbjct: 581 LGEKAAEMVF-KMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 272/529 (51%), Gaps = 49/529 (9%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL+ C + L Q +H+ ++ + I +L Y L+ A ++F +
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156
Query: 79 TTVWNHIIRGYAR---SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W +I GY++ + + ++ + +MV PN F S L+ C G +G+Q
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQ 216
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG G+ NVFV ++L++ YA CG+
Sbjct: 217 IHGCCWKYGFQENVFVGSSLVDMYA-------------------------------RCGE 245
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+R VFDE+ +N VSW +I+G A+KG ++AL LF +M+R
Sbjct: 246 LRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G L+ G+W+H ++ ++ ++ + N L+HMYA G I DA +VF ++ +
Sbjct: 306 SSTTGSLEQGKWLHAHMM-----KSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKV 360
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VS SM++ +A+ GLGKEA+ LF+ M+ V+ + P+ IT + VL AC HAG +DE
Sbjct: 361 DVVSCNSMLIGYAQHGLGKEAVELFEEMM---LWVE-IEPNDITFLSVLTACSHAGLLDE 416
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G F M + +G+ P++ HY +VDL RAG LD+A IE MP++PN +WGALLG
Sbjct: 417 GLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGAS 475
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
++HKN+E+ + K V ELD G LLSNIYA A +W+DV VR++M + G+KK
Sbjct: 476 KMHKNTEMGAYAAQK-VLELDP-FYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKE 533
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
P SW++I VH F A D++H +YE+ + ++ Y PD +
Sbjct: 534 PACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTS 582
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 259/497 (52%), Gaps = 46/497 (9%)
Query: 16 QQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+Q + L C+ + +L QIH+++ L G + + K++ F S + +A +F I
Sbjct: 12 EQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIP 71
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
P + +WN +IRG+ S T + + + + P+ FT+SF+L R + G+Q
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGKQ 131
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + G+ ++ +V +LI+ Y GM + D
Sbjct: 132 LHCSLFKFGFENHTYVRNSLIHMY--------------GMLK-----------------D 160
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-----VEXXXXXXX 250
+ A ++F+EM N+VSW ++I G+ +A+ LF +M + + ++
Sbjct: 161 IEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLV 220
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L GR +H +V+ + N S+ + NAL+ MYA CG + +AY+ F+
Sbjct: 221 VTLSACGAIGSLDFGRKVHSFVRDGV---NSFGESISVFNALVDMYAKCGAVEEAYETFS 277
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
M +++ VSW MI+ FA G G+EAL LF M+ + RPD IT + VLCAC H
Sbjct: 278 NMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVE----RPDEITFLCVLCACSHG 333
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G VDEGRR F MNR + I P I+HYGCMVDLL RAG EA+ LI++MP++ N +W
Sbjct: 334 GLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRT 393
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+ + N EL V L+ EL+ D ++ Y VLL+N+YA +W ++ R+ M E
Sbjct: 394 LLAACRNYGNVELGEKVRKHLM-ELEPDHSSDY-VLLANMYASTGQWNEMSKERRSMQER 451
Query: 491 GVKKP-PGQSWIQINGV 506
V+KP PG S+I I G
Sbjct: 452 RVRKPEPGNSFIGIPGT 468
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/596 (29%), Positives = 282/596 (47%), Gaps = 85/596 (14%)
Query: 19 VFTLLQSCNNI---QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V +LL +C ++ N Q HS + G++ + LL Y+ ++ AH+ F +
Sbjct: 388 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACE 447
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ +WN ++ GY + KS + + QM PN FTY +L C G GEQ
Sbjct: 448 TENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 507
Query: 136 VHGIVLVKG-----YCSNVFVE--------------------------TNLINFYAGRGG 164
+H VL G Y S+V ++ T +I Y
Sbjct: 508 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 567
Query: 165 VEQARHVF----------DGMGQRSVVSW-----------------------------NS 185
+A ++F D +G S +S N+
Sbjct: 568 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNA 627
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+++ Y CG A FD++ ++ VSW ++++G AQ G ++AL++F +M +A +E
Sbjct: 628 LVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEIN 687
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
++++G+ IH ++ + ++NALI +YA CG I DA
Sbjct: 688 SFTFGSAVSAAANIANVRIGKQIHGMIR-----KTGYDSETEVSNALITLYAKCGTIDDA 742
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+ F +MP ++ +SW SMI +++ G G EAL LF+ M +D V P+ +T + VL
Sbjct: 743 ERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDM----KQLD-VLPNHVTFVGVLS 797
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H G VDEG F SM+ + P+ EHY C+VDLL R+G L A +E MP++P+
Sbjct: 798 ACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDA 857
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
+W LL C +HKN ++ L+ EL+ +A Y VL+SN+YA + +W RQ
Sbjct: 858 MVWRTLLSACNVHKNIDIGEFAASHLL-ELEPKDSATY-VLVSNMYAVSGKWDCRDRTRQ 915
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
M + GVKK PG+SW++++ VH F AGD H + IYE L + ++ + Y P
Sbjct: 916 MMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVP 971
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 174/417 (41%), Gaps = 46/417 (11%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C ++ Q+H V+ G S +T + L++ Y S L A ++F +
Sbjct: 289 SVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR 348
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+N +I G A+ +++ +++M +P+ T + LLSAC G L G+Q H
Sbjct: 349 DRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFH 408
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ G S++ VE +L++ Y V C D
Sbjct: 409 SYAIKAGMTSDIVVEGSLLDLY-------------------------------VKCSDIK 437
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A F NVV W M+ G Q ++ +F +M+ +
Sbjct: 438 TAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCT 497
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G LG IH V + Q +V +++ LI MYA G + A ++F ++ +
Sbjct: 498 TLGATDLGEQIHTQ-----VLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 552
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSWT+MI + + EAL LFK M G++ D I + AC +D+GR
Sbjct: 553 VSWTAMIAGYTQHDKFTEALNLFKEMQD-----QGIKSDNIGFASAISACAGIQALDQGR 607
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+I A + G S + +V L +R G + EA+ + + K N + W +L+ G
Sbjct: 608 QIHAQSCLS-GYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS-WNSLVSG 662
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 181/428 (42%), Gaps = 47/428 (10%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G R+ Q LL+ C N ++ +++H +++ G + + +L+ FY+A L A
Sbjct: 76 GVRANSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLNCA 135
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
+F + S + WN I + + +R+M++ E + ++ +L C
Sbjct: 136 VNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGN 195
Query: 128 GL-LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
+ R EQ+H + G+ S+ F+ LI+ Y G +
Sbjct: 196 AVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLS-------------------- 235
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
A++VF+ + R+ VSW MI+G +Q G ++A+ LF +M + +
Sbjct: 236 -----------SAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTP 284
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
+ G+ +H +V + + NAL+ +Y+ G + A
Sbjct: 285 YIFSSVLSACTKVEFFEFGKQLHG-----LVLKQGFSSETYVCNALVTLYSRSGNLSSAE 339
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
Q+F M QR VS+ S+I A+QG AL LFK M +D +PD +T+ +L A
Sbjct: 340 QIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM-----NLDCQKPDCVTVASLLSA 394
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C G + G++ F S G++ I G ++DL + + AH + N
Sbjct: 395 CASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETE-NVV 452
Query: 427 LWGALLGG 434
LW +L G
Sbjct: 453 LWNVMLVG 460
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 282 bits (722), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 259/473 (54%), Gaps = 24/473 (5%)
Query: 22 LLQSCNNI--QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQ--LQHAHKLFSTIDNP 77
LLQ N+ + QIH+ + N L++ + I +++L+F+ AS + ++A LF+ + NP
Sbjct: 12 LLQQWQNLTMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNP 71
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ +N II Y + KS+ + +M++ PN T++ L+ +CV L EQV
Sbjct: 72 NIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVT---LSSLEQVF 128
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ + G S+V+ +++IN ++ G + AR VFD R+VV W S+++GY SCG +
Sbjct: 129 TLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVN 188
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-----RARVEXXXXXXXXX 252
R VFD+MP RN S + M++G + + + LF E++ RARV+
Sbjct: 189 EVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSV 248
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G + G+WIH YV++ N + + L ALI YA CG + DA +VF KM
Sbjct: 249 LNACTVMGAFEEGKWIHSYVEE-----NGLEYDLELGTALIDFYAKCGWVKDAEKVFDKM 303
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+ +W++MI+ A G K AL LF+ M G +P+ +T + VL AC H
Sbjct: 304 LVKDVATWSAMILGLAINGNNKMALELFEKMEKVGP-----KPNEVTFVGVLTACNHKSL 358
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
E R+F M+ + I+P IEHYGC+VD+L+R+G + +A I +M ++P+ A+WG+LL
Sbjct: 359 FGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLL 418
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
GC +H + EL V L+ E D + + Y VLL+N+YA +W+ V V +
Sbjct: 419 NGCLMHGHYELGQKVGKYLI-EFDPEHSGRY-VLLANMYANMGKWEGVSEVAE 469
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 273/542 (50%), Gaps = 23/542 (4%)
Query: 18 HVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTN--IITKLLSFYIASDQLQHAHKLFS 72
H +LL+ C+ L Q+H+ ++ GL N + LL Y + HA KLF
Sbjct: 22 HFRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFD 81
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR--GGLL 130
I ++ R P++S++ + QM + +G L+AC R GG
Sbjct: 82 EIPQSHKDSVDYT--ALIRHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDT 139
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
+ G Q+H V+ G+ V L+N Y G V +AR +F+G+ RSVVSW+ L G
Sbjct: 140 KVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGL 199
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-RARVEXXXXXX 249
V + R +FDEMP RN V+WT MI G G K+A L EM
Sbjct: 200 VKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTL 259
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
GD+ +GRW+H Y V V + +L+ MYA CG I A VF
Sbjct: 260 CSVLSACSQSGDVCVGRWVHCYA----VKEMGLDFGVMVGTSLVDMYAKCGRINAALSVF 315
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
M +R+ V+W +M+ A G+GK A+ +F +MV + V+PD +T + +L AC H
Sbjct: 316 RSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEE------VKPDGVTFMALLSACSH 369
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
+G V++G F + + I P IEHY CMV LL RAG L+EA +++NM + PN+ + G
Sbjct: 370 SGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLG 429
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+L+G C H +L + L+ E+D Y ++LSN+YA + + + ++RQ + +
Sbjct: 430 SLIGSCYAHGRLQLGEKIMRDLL-EMDPLNTE-YHIVLSNMYALSGKVEKANSLRQVLKK 487
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL- 548
G+KK PG S I ++G +H F+AGD +H + IY L E+I + Y P+ + L
Sbjct: 488 RGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPNTSCQVLF 547
Query: 549 GC 550
GC
Sbjct: 548 GC 549
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 173/597 (28%), Positives = 287/597 (48%), Gaps = 86/597 (14%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
+ +C+N ++L+ +H+ +++G + + L+ Y ++ +A K+F + T +W
Sbjct: 118 VAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH----- 137
N +I G ++ S++ +R+MV+ + T + +L A L+ G +
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237
Query: 138 -----------GIVLVKGYCSNV------FVETN---------LINFYAGRGGVEQARHV 171
G++ + C +V F N +I+ + GG E + +
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297
Query: 172 FDGM---GQRSVVSWNSIL--------------------------------------AGY 190
F + G+R VS ++I+ A Y
Sbjct: 298 FRELLFSGER--VSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIY 355
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
+ D AR +FDE P + VV+W MI+G Q G + A+SLF EM +
Sbjct: 356 NKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTIT 415
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
G L G+W+H ++ +P++ ++ AL+ MYA CG I +A+Q+F
Sbjct: 416 TILSACAQLGSLSFGKWVH-----HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFD 470
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
M +++TV+W +MI + G G EAL L+ M+ G P A+T + VL AC HA
Sbjct: 471 SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLG-----YNPSAVTFLSVLYACSHA 525
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V EG IF +M + I P IEHY CMVD+L R+G L++A I+ MP++P A+WG
Sbjct: 526 GLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGT 585
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LLG C IHK++++A + +L ELD G+ GY VLLSNIY+ + + ++RQ + +
Sbjct: 586 LLGACMIHKDTDIARLASERLF-ELDP-GSVGYYVLLSNIYSVERNFPKAASIRQVVKKR 643
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
+ K PG + I++NG H FV+GD +H H+ IY L ++ + Y+ + A
Sbjct: 644 KLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPAL 700
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 200/467 (42%), Gaps = 60/467 (12%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
+SG+ S + +F+L+ + +L Q H+Q +LNG +TKL +HA
Sbjct: 6 SSGKLS-RNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHAR 64
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRG 127
LF ++ P ++N ++RG++ + +P S+ Y + +T P+ FTY+F ++AC
Sbjct: 65 ALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSND 124
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
L +H ++ GY SNVFV + L++ Y V AR VFDGM +R V WN+++
Sbjct: 125 KHLM---LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMI 181
Query: 188 AGYVSCGDFDGARRVFDEMPIRNV-VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G V FD + ++F EM V V +T+ A L E++ +V
Sbjct: 182 NGLVKNCCFDDSIQLFREMVADGVRVDSSTVTA----------VLPAAAELQELKVGMGI 231
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
LK+G YV LI +Y+ CG + A
Sbjct: 232 QCLA-----------LKIGFGFCDYVL----------------TGLISLYSKCGDVNTAR 264
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD-----GVRPDAITLI 361
+F ++ + +++ +MI F G + ++ LF+ ++ G V G+ P
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFG 324
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+ AC GF + I ++P + + ++ +D A L + P
Sbjct: 325 HLHLACSIHGFCVKSGII---------LNPTVS--TAFTAIYNKLNEIDLARHLFDESPE 373
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
K A W A++ G + ++E A + +++ T A +LS
Sbjct: 374 KTVVA-WNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 268/528 (50%), Gaps = 27/528 (5%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ---HAHKLFSTID-- 75
TL Q+CN++ L Q+H+ ++ + + +LS S+ +A +F +
Sbjct: 9 TLAQNCNSLTQLKQLHAHILRCHIQHSPYALAPILSVAATSNYTSFFLYARSIFHNLTHR 68
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR--------G 127
N +T + N +IR Y ++H+P +V CY M+ N +T+ L+ +C
Sbjct: 69 NRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIAASSKCA 128
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+ G VH V++ G ++ +V + I FY+ G + +AR +FD G++ VV W +++
Sbjct: 129 SSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMI 188
Query: 188 AGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
GY GD + AR +FDEMP RNVVSW+ M+A ++ ++ L LF EM+ V
Sbjct: 189 DGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDS 248
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G L G W+H Y R R P L AL+ MY+ CG + A
Sbjct: 249 VLVTVLTACAHLGALTQGMWVHSYA--RRFDRVSSNPI--LATALVDMYSKCGCVESALS 304
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF + + +W +MI A G +++L LF+ M+ V G +P+ T + VL AC
Sbjct: 305 VFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMI-----VCGNKPNETTFVAVLTAC 359
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM--PLKPND 425
HA V EG R+F M+ T+G+ P EHY C+VDLLSR+G ++EA IE D
Sbjct: 360 THARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGD 419
Query: 426 A-LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
A +WGA+L C+I+KN + + V KL+ D G VL NIY A + VR
Sbjct: 420 ANVWGAILNACRIYKNINVGNRVWKKLIDMGVAD--CGTHVLTYNIYREAGWDAEANRVR 477
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
+ E G+KK PG S I++ V +F+AGD +H + + +L I+K
Sbjct: 478 SMISEAGMKKKPGCSIIEVGNEVEEFLAGDQSHPQAQEMCRLLDSILK 525
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 270/518 (52%), Gaps = 15/518 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H+Q++ +GL+ L+ Y L+ A KLF + W ++ S+
Sbjct: 29 KLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSN 88
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL--REGEQVHGIVLVKGYCSNVFV 151
P K+ ++ +P+ F +S L+ AC G + + G+Q+H L+ + + V
Sbjct: 89 LPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVV 148
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+++L++ YA + R VFD + + S +SW ++++GY G A +F E P +N+
Sbjct: 149 KSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNL 208
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK-LGRWIHW 270
+WT +I+G Q G AL LF EMRR V ++ LG+ +H
Sbjct: 209 YAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHC 268
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+V + + ++NAL+ MYA C + A +F +M ++ VSWTS+I+ A+
Sbjct: 269 -----VVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQH 323
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
GL +EAL L+ MV + GV+P+ +T + ++ AC H G V +GR +F SM +GI
Sbjct: 324 GLAEEALTLYDDMV-----LAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR 378
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P ++HY C++DL SR+G LDEA LI MP+KP++ W ALL C+ H N+++A +
Sbjct: 379 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADH 438
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
L+ +L + + Y +LLSNIYA A W++V VR+ M VKK PG S + + F
Sbjct: 439 LL-DLKPEDPSSY-ILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVF 496
Query: 511 VAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
AG+ + I +++++ + Y PD + L
Sbjct: 497 HAGEASQPMKDEILGLMTKLDSEMRRRGYVPDTSSVLL 534
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/539 (34%), Positives = 271/539 (50%), Gaps = 61/539 (11%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+ SC N++ + + +H ++V +GL Q + TKL++ Y + HA K+F +
Sbjct: 80 LINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKT 139
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL----LREGE 134
VWN I R A + + Y QM N FTY+++L ACV L LR+G+
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGK 199
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
++H +L GY +V V T L++ YA GYVS
Sbjct: 200 EIHAHILRHGYEGHVHVMTTLLDVYAR--------------------------FGYVS-- 231
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX--XXXXX 252
A VF MP +N+VSW+ MIA A+ +AL LF M +
Sbjct: 232 ---YASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSV 288
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
L+ G+ +H YV +R + ++ + N LI MY CG I +VF M
Sbjct: 289 LQACASLAALEHGKLVHAYVLRRGL-----DSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+R +SW S+I + GLGK+A+ +F+ M++ G V P IT I VLCAC HAG
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRG-----VSPSYITFITVLCACSHAGL 398
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V+E + +F SM + I PR+EHY CMVD+L RA LDEA LI+NM KP +WG+LL
Sbjct: 399 VEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLL 458
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
G C+IH N ELA L EL+ A Y VLLS+IYA ++ W DV VR+++ G+
Sbjct: 459 GSCRIHCNVELAERASAMLF-ELEPKNAGNY-VLLSHIYAKSRMWNDVRRVRKQLESRGL 516
Query: 493 KKPPGQSWIQINGVVHDFVA----GDMTHKHSYFIYEILSEI-----IKQSHVDSYEPD 542
+K P SWI++ ++ V+ + F+ +L+EI + Q++V +Y+ D
Sbjct: 517 QKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLD 575
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 145/335 (43%), Gaps = 47/335 (14%)
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
Q++ E P T+ L+++C+ L +G VH ++ G + ++ T LIN Y G
Sbjct: 64 QLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLG 123
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIA 219
V+ A VFD ++++ WN+I + ++ +M N ++T ++
Sbjct: 124 SVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLK 183
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C LS+ L+ G+ IH + + R
Sbjct: 184 ACVV-----SELSI--------------------------CPLRKGKEIHAH-----ILR 207
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
+ + V + L+ +YA G + A VF MP ++ VSW++MI +AK + +AL L
Sbjct: 208 HGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALEL 267
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
F+ M+ + D V P+ IT++ VL AC ++ G+ + A + R G+ + +
Sbjct: 268 FQIMMLEAC--DTV-PNPITMVSVLQACASLAALEHGKLVHAYVLRR-GLDSTLPVLNTL 323
Query: 400 VDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLG 433
+ + R G + + + M K D + W +L+
Sbjct: 324 ITMYGRCGEISTGQRVFDYM--KKRDVISWNSLIS 356
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 176/560 (31%), Positives = 281/560 (50%), Gaps = 64/560 (11%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQ 65
SG R + ++L +C++++ L +IH+ V++N L + + + L+ Y Q +
Sbjct: 281 SGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPE 340
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSAC 124
+F + + VWN +I GY R+ ++++E + +MV PN T S +L AC
Sbjct: 341 KGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC 400
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
VR + E +H V+ G+ + +V+ L++ Y+ G +E AR
Sbjct: 401 VRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIAR--------------- 445
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
+F M +++VSW TMI G GR AL+L +M+R + E
Sbjct: 446 ----------------SIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEH 489
Query: 245 ------------------XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
L G+ IH Y +++++++ V
Sbjct: 490 RINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKD-----V 544
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
+ +AL+ MYA CG + + VF +M R+ ++W +IMA+ G G+EAL LF+ MV +
Sbjct: 545 AVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEE 604
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G +RP+ +T I + + H+G VDEG +F +M GI P +HY C+VDLL R+
Sbjct: 605 GDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRS 664
Query: 407 GFLDEAHGLIENMP--LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYL 464
G ++EA+ LI+ MP +K DA W +LLG C+IH+N E+ + L LD + A Y
Sbjct: 665 GQIEEAYNLIKTMPSNMKKVDA-WSSLLGACKIHQNLEIGEIAAKNLFV-LDPN-VASYY 721
Query: 465 VLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIY 524
VLLSNIY+ A W I VR+KM E GV+K PG SWI+ VH F+AGD++H S ++
Sbjct: 722 VLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVH 781
Query: 525 EILSEIIKQSHVDSYEPDIT 544
E L + + + Y PD +
Sbjct: 782 EYLETLSLRMKKEGYVPDTS 801
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 205/486 (42%), Gaps = 82/486 (16%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLI-------QIHSQVVLNGLSQKTNIITK 53
ML+E P S FTL+ + NLI Q+H+ V+ NG +T
Sbjct: 177 MLLENVGPTS---------FTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNA 226
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L++ Y ++ A LF D+ WN II +++ +++ M+ + PN
Sbjct: 227 LVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPN 286
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKG-YCSNVFVETNLINFYAGRGGVEQARHVF 172
G T + +L AC +L G+++H VL+ N FV L++ Y E+ R VF
Sbjct: 287 GVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVF 346
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFD-GARRVFDEMPIR-----NVVSWTTMIAGCAQKGR 226
DGM +R++ WN+++AGYV +FD A +F EM N V+ ++++ C R
Sbjct: 347 DGMFRRTIAVWNAMIAGYVR-NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACV---R 402
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
C+ L G IH V + +++
Sbjct: 403 CESFLDKEG--------------------------------IHSCVVKWGFEKDKY---- 426
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM--- 343
+ NAL+ MY+ G I A +F M ++ VSW +MI + G +AL L M
Sbjct: 427 -VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485
Query: 344 -----------VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
D ++P+++TL+ VL C + +G+ I A + +S
Sbjct: 486 QAEHRINTFDDYEDNKNFP-LKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM-LSKD 543
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+ +VD+ ++ G L+ + + E M ++ N W L+ +H E A + ++V
Sbjct: 544 VAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMV 602
Query: 453 AELDTD 458
E D +
Sbjct: 603 EEGDNN 608
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 166/421 (39%), Gaps = 54/421 (12%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L++ IQ+L Q+H+ V G + T + ++ Y + A ++F I N
Sbjct: 91 VLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNRD 150
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC---VRGGLLREGEQ 135
WN +I R +V +R M+ P FT + AC + G LL G+Q
Sbjct: 151 DVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLL--GKQ 208
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VH VL G F L+ YA G V +A+ +FD + +VSWN
Sbjct: 209 VHAFVLRNGDW-RTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWN----------- 256
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
T+I+ +Q R ++AL M ++ V
Sbjct: 257 --------------------TIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPA 296
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L G+ IH +V + N + + AL+ MY +C VF M +R
Sbjct: 297 CSHLEMLGCGKEIHAFV----LMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRR 352
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC--CHAGFV 373
+ W +MI + + EA+ LF MV + G+ P+++TL VL AC C +
Sbjct: 353 TIAVWNAMIAGYVRNEFDYEAIELFVEMVFEL----GLSPNSVTLSSVLPACVRCESFLD 408
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
EG S WG ++D+ SR G ++ A + +M K + W ++
Sbjct: 409 KEG---IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK-DIVSWNTMIT 464
Query: 434 G 434
G
Sbjct: 465 G 465
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 146/364 (40%), Gaps = 55/364 (15%)
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
PS V +H+ S T +++ Y MV+ P+ F + +L A L G+Q+
Sbjct: 49 PSEWV-SHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQL 107
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H V G V + +N Y CGD
Sbjct: 108 HAHVFKFGQALPTAVPNSFVNMYG-------------------------------KCGDI 136
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV-EXXXXXXXXXXXX 255
D ARRVFDE+ R+ VSW +MI + + A+ LF M V
Sbjct: 137 DAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHAC 196
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L LG+ +H + V RN + NNAL+ MYA G + +A +F +
Sbjct: 197 SNLINGLLLGKQVHAF-----VLRNGDWRTFT-NNALVTMYAKLGRVYEAKTLFDVFDDK 250
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSW ++I + ++ +EAL M+ GVRP+ +TL VL AC H +
Sbjct: 251 DLVSWNTIISSLSQNDRFEEALLYLHVMLQ-----SGVRPNGVTLASVLPACSHLEMLGC 305
Query: 376 GRRI--FASMNRTWGISPRIEH--YGC-MVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G+ I F MN IE+ GC +VD+ ++ + + M + A+W A
Sbjct: 306 GKEIHAFVLMNNDL-----IENSFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTIAVWNA 359
Query: 431 LLGG 434
++ G
Sbjct: 360 MIAG 363
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 280 bits (715), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 254/509 (49%), Gaps = 48/509 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H+ + NG KT +I LL+ Y+ + L+ A +F + + W +I Y+ +
Sbjct: 105 RVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAK 164
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++++ M+ PN +T+S +L AC R L + +QVH +L G S+VFV +
Sbjct: 165 LNDRAMKLLVFMIRDGVMPNMYTFSSVLRACER---LCDLKQVHSGILKAGLESDVFVRS 221
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI+ Y+ G + + +G VF EM + V
Sbjct: 222 ALIDAYSKLG------ELLEAVG-------------------------VFREMVTGDSVV 250
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W ++IA AQ +AL+L+ MRR L+LGR +H +V
Sbjct: 251 WNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVL 310
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + LNNAL+ MY CG + DA +F++M + +SW++MI A+ G
Sbjct: 311 KF-------DQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFS 363
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EAL LF +M V G RP+ IT++ VL AC HAG V+EG F SM +GI P
Sbjct: 364 VEALNLFDSM-----KVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGR 418
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY C++DLL RAG LDE LI M +P+ W LL C+ +N +LA+ K +
Sbjct: 419 EHYSCLLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRNVDLATYA-AKEIL 477
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+LD A Y VLLSNIYA +KRW DV VR+ M G++K PG SWI++N +H F+ G
Sbjct: 478 KLDQQDAGAY-VLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEVNNQIHAFIVG 536
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
D +H I L E I++ Y PD
Sbjct: 537 DKSHPQIDEINRKLDEYIRKLTDAGYVPD 565
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 279 bits (713), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/464 (35%), Positives = 250/464 (53%), Gaps = 25/464 (5%)
Query: 49 NIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV 106
N+IT +++ + L+ A F + S WN ++ GYA+ P +++ + M+
Sbjct: 199 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 258
Query: 107 ST-EAEPNGFTYSFLLSACVRGGLLREGEQ-VHGIVLVKGYCSNVFVETNLINFYAGRGG 164
S +P+ T+ ++S+C G E V + G+ N FV+T L++ +A G
Sbjct: 259 SPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGN 318
Query: 165 VEQARHVFDGMG---QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
+E A +F+ +G RS V WN++++ Y GD AR +FD+MP R+ VSW +MIAG
Sbjct: 319 LEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGY 378
Query: 222 AQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
Q G +A+ LF EM + + G+L LG W I+ N
Sbjct: 379 TQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNW-----AVSILKEN 433
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
Q S+ + N+LI MY+ CG + DA +F +M R VS+ ++I FA+ G G E++ L
Sbjct: 434 HIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELL 493
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M DG + PD IT I +L AC HAG + EG+R+F S+ P ++HY CM+
Sbjct: 494 LKMKEDG-----IEPDRITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMI 543
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGA 460
D+L RAG L+EA LI++MP++P+ ++G+LL IHK EL + KL +++ +
Sbjct: 544 DMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLF-KVEPHNS 602
Query: 461 AGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQIN 504
Y VLLSNIYA A RW+D VR M + GVKK G SW++ N
Sbjct: 603 GNY-VLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEHN 645
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 197/477 (41%), Gaps = 91/477 (19%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLS----FYIASDQLQHAHKLFSTIDN 76
+++ N+ L Q+H+Q+V + L + + + LL+ S H +F +
Sbjct: 8 SIVSKITNLHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCH---IFHAATH 64
Query: 77 PSTTVWNHIIRGYA----RSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLR 131
P V+ +++ Y+ R+ P V ++ M+ +PN YS ++ + +L
Sbjct: 65 PDVRVFTFMLKYYSQIGVRAQVP---VSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLF 121
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
VL GY + +V ++ YA G +E AR +FD M R+V WN +++GY
Sbjct: 122 LAH-----VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYW 176
Query: 192 SCGD-----------------------------------FDGARRVFDEMPIRNVVSWTT 216
CG+ AR FD+MP R+VVSW
Sbjct: 177 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 236
Query: 217 MIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWI------- 268
M++G AQ G ++ + LF +M V+ GD L I
Sbjct: 237 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDT 296
Query: 269 -----HWYVQQRIVARNQQQPSVRLN------------------NALIHMYASCGVIGDA 305
+++V+ ++ + + ++ NA+I YA G + A
Sbjct: 297 VGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSA 356
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+F KMPQR TVSW SMI + + G +A+ LF+ M+S + +PD +T++ V
Sbjct: 357 RHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISS----EDSKPDEVTMVSVFS 412
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
AC H G + G + + I I Y ++ + SR G + +A + + M +
Sbjct: 413 ACGHLGELGLGNWAVSILKEN-HIQISISVYNSLISMYSRCGSMQDAVLIFQEMATR 468
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 252/465 (54%), Gaps = 26/465 (5%)
Query: 49 NIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV 106
N+IT +++ + L+ A F + S WN ++ GYA+ P +++ + M+
Sbjct: 184 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 243
Query: 107 ST-EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK-GYCSNVFVETNLINFYAGRGG 164
S +P+ T++ ++S+C G E + + K G+ N FV+T L++ +A G
Sbjct: 244 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN 303
Query: 165 VEQARHVFDGMG---QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
+E A +F+ +G RS V WN++++ Y GD A+ +FD+MP R+ VSW +MIAG
Sbjct: 304 LEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGY 363
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX--XXGDLKLGRWIHWYVQQRIVAR 279
Q G +A+ LF EM + G+L LG W I+
Sbjct: 364 TQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW-----AVSILKV 418
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
N Q S+ + N+LI+MY+ CG + DA +F +M R VS+ ++I FA+ G G E++ L
Sbjct: 419 NHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIEL 478
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
M DG + PD IT I +L AC HAG +DEG+R+F S+ P ++HY CM
Sbjct: 479 LSKMKEDG-----IEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACM 528
Query: 400 VDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDG 459
+D+L RAG L+EA LI++MP++P+ ++G+LL IHK EL + KL +++
Sbjct: 529 IDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLF-KVEPHN 587
Query: 460 AAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQIN 504
+ Y LLSNIYA A RW++ VR M + GVKK G SW++ N
Sbjct: 588 SGNY-ALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 631
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 182/445 (40%), Gaps = 88/445 (19%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKS-VECYRQMVS- 107
++T+ F S H +F +P V+ +++ Y++ + V ++ M+
Sbjct: 26 LLTQCTRFLAPSSYTCH---IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQH 82
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+ +PN YS ++ + +L VL GY + +V ++ YA G +E
Sbjct: 83 CDIKPNASFYSVMMKSAGSESMLFLAH-----VLKSGYDRDHYVRNGILGIYAKYGPIEF 137
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGD-------------------------------- 195
AR +FD M R+V WN +++GY CG+
Sbjct: 138 ARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAK 197
Query: 196 ---FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXX 251
AR FD+MP R+VVSW M++G AQ G ++ + LF +M V+
Sbjct: 198 KGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWAT 257
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT- 310
GD L I + ++ R P+ + AL+ M+A CG + A+++F
Sbjct: 258 VISSCSSLGDPCLSESIVRKLDDKVGFR----PNYFVKTALLDMHAKCGNLEAAHKIFEQ 313
Query: 311 ---------------------------------KMPQRSTVSWTSMIMAFAKQGLGKEAL 337
KMPQR TVSW SMI + + G +A+
Sbjct: 314 LGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAI 373
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
LF+ M+S D +PD +T++ V AC H G + G S+ + I I Y
Sbjct: 374 KLFEEMISSE---DSRKPDEVTMVSVFSACGHLGELGLGNWA-VSILKVNHIQISISVYN 429
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLK 422
++++ SR G + +A + + M +
Sbjct: 430 SLINMYSRCGSMQDAVLIFQEMATR 454
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 261/538 (48%), Gaps = 76/538 (14%)
Query: 17 QHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+H+ LL N+I ++ QIH+Q++ TI
Sbjct: 15 KHINHLLNQSNSISHVKQIHAQIL-------------------------------RTIHT 43
Query: 77 PSTTVWNHIIRGYARSHT-PWKSVECYRQMVS---TEAEPNGFTYSFLLSACVRGGLLRE 132
P++ WN +I+ Y++S K++ Y+ +++ E P+ TY F+L AC L E
Sbjct: 44 PNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFE 103
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+QVH VL G+ + ++ +LI+FYA S
Sbjct: 104 GKQVHAHVLKLGFELDTYICNSLIHFYA-------------------------------S 132
Query: 193 CGDFDGARRVFDEM-PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
CG + AR+VFD M RNVVSW MI A+ G L +F EM + E
Sbjct: 133 CGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQS 191
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G L LG W+H +V ++ V +N L+ MY CG + A QVF
Sbjct: 192 VIRACGGLGSLSLGMWVHAFVLKK--CDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEG 249
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M R SW S+I+ FA G K AL F MV V+ + P++IT + VL AC H+G
Sbjct: 250 MSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVK----VEKIVPNSITFVGVLSACNHSG 305
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
VDEG F M + + + P + HYGC+VDL +RAG + EA ++ MP+KP+ +W +L
Sbjct: 306 MVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSL 365
Query: 432 LGGC-QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
L C + H + EL+ + K + E + G VLLS +YA A RW DV +R+ M +
Sbjct: 366 LDACYKQHASVELSEEM-AKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDK 424
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
GV K PG S I+ING H+F AGD H S IY+ ++EI ++ Y PD +GA L
Sbjct: 425 GVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGYLPDYSGAPL 482
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 275/540 (50%), Gaps = 51/540 (9%)
Query: 16 QQHVF------TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD-QLQHAH 68
+ H+F TL Q CNN L QIH+Q++ GLS +T ++ L+ I+S L +A
Sbjct: 143 KNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIK--ISSKFNLPYAF 200
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWK---SVECYRQMVSTE-AEPNGFTYSFLLSAC 124
K+F+ I NP+ ++N +I + + Y ++++ + +PN FT+ L AC
Sbjct: 201 KIFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKAC 260
Query: 125 VRG-GLLREGEQVHGIVL--VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
G +H VL ++ N FV+ +L+NFYA G + +R++FD + + +
Sbjct: 261 CSNQSWFHYGPLLHTHVLKFLQPPFDN-FVQASLLNFYAKYGKMCVSRYIFDRINEPDLA 319
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+WN IL Y + FD+ ++L LF +M+
Sbjct: 320 TWNVILNAYARSSSYHSYSNSFDDADFS------------------LESLYLFRDMQVIG 361
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ G + G W+H +V RN+ + + + A + MY+ CG
Sbjct: 362 IRPNEVTIVALISACSNLGAVSQGFWVHCFV-----LRNKIKMNRFVGTAFVDMYSKCGC 416
Query: 302 IGDAYQVFTKMPQ--RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ A QVF KMP+ R + +T+MI FA G G +AL L++ M G+ PD+ T
Sbjct: 417 LNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKM-----KFKGLVPDSAT 471
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+V + AC H G V+EG IF SM G+ P++EHYGC++DLL RAG L EA + +M
Sbjct: 472 FVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADM 531
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P+KPN LW +LLG +IH N + V KL+ EL+ + + Y VLLSN+YA R D
Sbjct: 532 PMKPNAVLWRSLLGAARIHGNLGVGEVALTKLI-ELEPETSGNY-VLLSNMYASVGRVND 589
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V VR+ M GV K PG S ++I G +H+F+ GD +H S IY ++EI S ++ Y
Sbjct: 590 VKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEI--NSRLEEY 647
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 271/523 (51%), Gaps = 32/523 (6%)
Query: 26 CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS--TTVWN 83
C + +L Q H+ ++ + L Q +++ + + + +++ +F+ N V+N
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYN 82
Query: 84 HIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK 143
+II S+ +V +R + + ++ ++L + V G+Q+H + +V
Sbjct: 83 NIIYALYSSNAKL-AVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVT 141
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF 203
G NV V ++LI Y+ V AR +FD G V N+++ YV GD AR++F
Sbjct: 142 GLDKNVSVCSSLIQMYSCYD-VCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLF 199
Query: 204 DEMPIRN--VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
D M R+ V SWT MI+G Q +A+ LF M+ V+ G
Sbjct: 200 DSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGA 259
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L LG WIH Y+++ +++ V L N+LI MYA G I A ++F M ++ ++WT
Sbjct: 260 LHLGEWIHNYIEKHKLSK-----IVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWT 314
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
+MI A GLGKEAL +F M + D V+P+ +T I +L AC H G V+ GR F
Sbjct: 315 TMIAGLALHGLGKEALRVFSCMEKE----DRVKPNEVTFIAILSACSHVGLVELGRDYFT 370
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNS 441
SM +GI P+IEHYGCM+DLL RAG L EA ++ MP + N A+WG+LL ++
Sbjct: 371 SMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDA 430
Query: 442 ELA-------SVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
ELA +V+EP G G LLSN YA RW + VR+ M + GV+K
Sbjct: 431 ELAEEALRHLTVLEP---------GHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEK 481
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
PG S+I++N +V++F+AGD + IY++L + Q ++
Sbjct: 482 VPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDVLHSLDGQIKIE 524
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 276 bits (705), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 267/512 (52%), Gaps = 43/512 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H+ ++ + T+L+ Y D L AH +F + + W +I Y++
Sbjct: 61 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRG 120
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ + QM+ + EPN FT++ +L++C G Q+H +++ Y +VFV +
Sbjct: 121 YASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGS 180
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+L++ YA G + +AR VF+ +P R+VVS
Sbjct: 181 SLLDMYAKDGKIHEAR-------------------------------TVFECLPERDVVS 209
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
T +I+G AQ G ++AL LF ++ ++ L LG+ +H +V
Sbjct: 210 CTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHV- 268
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
R++ V L N+LI MY+ CG + + ++F M +R+ +SW +M++ ++K G G
Sbjct: 269 ----LRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEG 324
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR-TWGISPR 392
+E L LF M + V+PD++T++ VL C H G D+G IF M+ + P+
Sbjct: 325 REVLKLFTLMREETK----VKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 380
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+EHYGC+VDLL R+G ++EA I+ MP +P A+WG+LLG C++H N ++ +L+
Sbjct: 381 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 440
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
E++ G AG V+LSN+YA A RW+DV ++R M++ V K PG+S I+++ V+H F A
Sbjct: 441 -EIEP-GNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHA 498
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
D +H I + E+ Y PD++
Sbjct: 499 SDRSHPRREEICMKVKELSTSFKEVGYVPDLS 530
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 146/322 (45%), Gaps = 43/322 (13%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y+ +L+ CV REG++VH ++ Y +VF+ T LI Y
Sbjct: 43 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYT---------------- 86
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
C A VFDEMP RNVVSWT MI+ +Q+G QAL+LF +
Sbjct: 87 ---------------KCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQ 131
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M R+ E LGR IH ++ + + V + ++L+ MY
Sbjct: 132 MLRSGTEPNEFTFATVLTSCTSSLGFILGRQIH-----SLIIKLNYEDHVFVGSSLLDMY 186
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A G I +A VF +P+R VS T++I +A+ GL +EAL LF+ + +G++ +
Sbjct: 187 AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQG-----EGMKSN 241
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+T VL A +D G+++ + R+ I + ++D+ S+ G L + +
Sbjct: 242 YVTYTGVLTALSGLAALDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIF 300
Query: 417 ENMPLKPNDALWGALLGGCQIH 438
+ M + + W A+L G H
Sbjct: 301 DTMYERTVIS-WNAMLVGYSKH 321
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 8/231 (3%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L SC + I QIHS ++ + + LL Y ++ A +F +
Sbjct: 146 TVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPER 205
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
II GYA+ +++E +R++ + N TY+ +L+A L G+QVH
Sbjct: 206 DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVH 265
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
VL S V ++ +LI+ Y+ G + +R +FD M +R+V+SWN++L GY G+
Sbjct: 266 NHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGR 325
Query: 198 GARRVF----DEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
++F +E ++ + V+ +++GC+ G + L++F +M ++E
Sbjct: 326 EVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIE 376
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 262/540 (48%), Gaps = 58/540 (10%)
Query: 23 LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
++SC+++ +L QIH Q + G + + L+ Y L A KLF I +
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-----------NGFTYSFLLSACVRGG 128
W +I GY ++ ++V +++ + + + ++SAC R
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ E VHG+ + KG F+G + N+++
Sbjct: 213 VKSVTECVHGLAVKKG---------------------------FEG----CLAVGNTLMD 241
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXX 247
Y CG+ +R+VFD M +V SW ++IA AQ G +A SLF +M +R V
Sbjct: 242 AYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAV 301
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G L++G+ IH V + + + ++ + +++ MY CG + A +
Sbjct: 302 TLSAVLLACAHSGALQIGKCIH-----DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
F ++ +++ SWT M+ + G GKEA+ +F M+ G ++P+ IT + VL AC
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG-----IKPNYITFVSVLAAC 411
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
HAG + EG F M + + P IEHY CMVDLL RAG+L EA+GLI+ M +KP+ +
Sbjct: 412 SHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIV 471
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
WG+LLG C+IHKN EL + KL +LD GY VLLSNIYA A RW DV +R M
Sbjct: 472 WGSLLGACRIHKNVELGEISARKLF-KLDPSN-CGYYVLLSNIYADAGRWDDVERMRILM 529
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
G+ K PG S ++ G VH F+ GD H IYE L E+ + Y P++T
Sbjct: 530 KNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVL 589
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+V SW ++IA A+ G QAL F MR+ + DL G+ IH
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
QQ V + + +ALI MY+ CG + DA ++F ++P+R+ VSWTSMI + +
Sbjct: 110 ---QQAFVF--GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164
Query: 330 QGLGKEALGLFKT-MVSDGAGVDGV-----RPDAITLIVVLCAC 367
+EA+ LFK ++ D D + D++ L V+ AC
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 262/540 (48%), Gaps = 58/540 (10%)
Query: 23 LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
++SC+++ +L QIH Q + G + + L+ Y L A KLF I +
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP-----------NGFTYSFLLSACVRGG 128
W +I GY ++ ++V +++ + + + ++SAC R
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ E VHG+ + KG F+G + N+++
Sbjct: 213 VKSVTECVHGLAVKKG---------------------------FEG----CLAVGNTLMD 241
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXX 247
Y CG+ +R+VFD M +V SW ++IA AQ G +A SLF +M +R V
Sbjct: 242 AYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAV 301
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G L++G+ IH V + + + ++ + +++ MY CG + A +
Sbjct: 302 TLSAVLLACAHSGALQIGKCIH-----DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARK 356
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
F ++ +++ SWT M+ + G GKEA+ +F M+ G ++P+ IT + VL AC
Sbjct: 357 AFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG-----IKPNYITFVSVLAAC 411
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
HAG + EG F M + + P IEHY CMVDLL RAG+L EA+GLI+ M +KP+ +
Sbjct: 412 SHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIV 471
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
WG+LLG C+IHKN EL + KL +LD GY VLLSNIYA A RW DV +R M
Sbjct: 472 WGSLLGACRIHKNVELGEISARKLF-KLDPSN-CGYYVLLSNIYADAGRWDDVERMRILM 529
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
G+ K PG S ++ G VH F+ GD H IYE L E+ + Y P++T
Sbjct: 530 KNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVL 589
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+V SW ++IA A+ G QAL F MR+ + DL G+ IH
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
QQ V + + +ALI MY+ CG + DA ++F ++P+R+ VSWTSMI + +
Sbjct: 110 ---QQAFVF--GYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164
Query: 330 QGLGKEALGLFKT-MVSDGAGVDGV-----RPDAITLIVVLCAC 367
+EA+ LFK ++ D D + D++ L V+ AC
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 264/531 (49%), Gaps = 25/531 (4%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT- 80
+ + C ++++ +I S+ + +I Y+ + + A +LF ++
Sbjct: 314 MYRRCGDMKSAFKIFSKFARKCAASYNTMIVG----YLENGNVGKAKELFYQMEQEGVER 369
Query: 81 ---VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I G+ + ++ +R ++ EP+ FT +L+ +R+G+++H
Sbjct: 370 DRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIH 429
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
I +VKG SN FV L+ Y + A+ FD + +R +WN++++GY C
Sbjct: 430 SIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIG 489
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
R + + M NV +W +++AG + + A+ LF EM+ + +
Sbjct: 490 KIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIIL 549
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
+ G+ +H Y R + L+ MYA CG I YQV+ K+
Sbjct: 550 AACSKLATIHRGKQVHAYS-----IRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS 604
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ V +M+ A+A G G+E + +F+ M+ VRPD +T + VL +C HAG +
Sbjct: 605 NPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSR-----VRPDHVTFLSVLSSCVHAGSI 659
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
G F M T+ I+P ++HY CMVDLLSRAG LDEA+ LI+NMP++ + W ALLG
Sbjct: 660 KIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLG 718
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
GC IHK L + KL+ EL+ Y VLL+N+YA A RW D+ R+ M + G++
Sbjct: 719 GCFIHKEVALGEIAAEKLI-ELEPSNTGNY-VLLANLYASAGRWHDLAKTRELMNDKGMQ 776
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
K PG SWI+ VH F+A D +H+ IY +L + K + ++ IT
Sbjct: 777 KSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIRIKEHKSMIT 827
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 237/538 (44%), Gaps = 49/538 (9%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
T+LQS N++ Q+HS + G + TKLL Y + + A +F + +
Sbjct: 39 TILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLH 98
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTE--AEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W ++R + +K + + + + + F + +L+ C G L G QVHG
Sbjct: 99 SWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHG 158
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+VL G+ +NV+V LI+ Y G +++A+ V +GM Q+ VSWNSI+ V+ G
Sbjct: 159 MVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYE 218
Query: 199 ARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
A + + M + NVV+W+ +I G + +++ LF M A V
Sbjct: 219 ALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLP 278
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L +G+ +H Y + R++ + + NAL+ MY CG + A+++F+K +
Sbjct: 279 ACSRMKWLFVGKELHGY-----IVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFAR 333
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ S+ +MI+ + + G +A LF M +GV D I+ ++ D
Sbjct: 334 KCAASYNTMIVGYLENGNVGKAKELFYQMEQ-----EGVERDRISWNCMISGHVDNFMFD 388
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD--------EAHGLIENMPLKPNDA 426
+ +F + GI P G ++ GF D E H + L+ N
Sbjct: 389 DALMLFRDL-LMEGIEPDSFTLGSIL-----TGFADMTCIRQGKEIHSIAIVKGLQSNSF 442
Query: 427 LWGALLGG-CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
+ GAL+ C+ N +A+ + ++E DT + + L+S YA + + + +
Sbjct: 443 VGGALVEMYCKC--NDIIAAQMAFDEISERDT---STWNALISG-YARCNQIGKIRELVE 496
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
+M G +P +W I +AG + +K Y++ ++ + V S PDI
Sbjct: 497 RMKSDGF-EPNVYTWNSI-------LAGLVENKQ----YDLAMQLFNEMQVSSLRPDI 542
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 260/523 (49%), Gaps = 49/523 (9%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ T + SC + +L +IH ++V +G + + L+ Y QL+ A ++F +
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
N + WN +I GY ++ +++M S +P T + L AC + L EG+
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKF 329
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VHG ++ ++F+ ++L++ Y CG
Sbjct: 330 VHGYIIRNRIQPDIFLNSSLMDLY-------------------------------FKCGK 358
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ A +F MP VSW MI+G +G+ AL LFGEM ++ VE
Sbjct: 359 VESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAA 418
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L+ GR IH + +R + N+ + AL+ MYA CG + +A+ VF +P+R
Sbjct: 419 CSQLAALEKGREIHNLIVERNLGNNEV-----VMGALLDMYAKCGAVEEAFGVFKCLPER 473
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSWTSMI A+ G EAL LF M+ V+PD +T + +L AC HAG VD+
Sbjct: 474 DLVSWTSMITAYGSHGRVYEALELFAEMLQSN-----VKPDRVTFLAILSACSHAGLVDD 528
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND-ALWGALLGG 434
G F M +GI PRIEHY C++ LL RAG L EA+ ++++ P +D L L
Sbjct: 529 GLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSA 588
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C++HKN +L + L+ + D D ++ Y ++LSN+YA +W +V VR KM ++G+KK
Sbjct: 589 CRLHKNLDLGVEIAENLIDK-DPDDSSTY-IILSNMYASFGKWDEVRMVRSKMKDLGLKK 646
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
PG SWI+IN + F D +H H I ILS + SH++
Sbjct: 647 NPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYL--TSHME 687
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 47/404 (11%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L++C ++ ++ IH+ +V GL + + L+ Y ++ + A KLF + +
Sbjct: 111 SVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK 170
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I Y +S +++ + M EP+ T + +S+C R L G ++H
Sbjct: 171 DVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIH 230
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G+ + FV L++ Y G +E A VF+ M ++VV+WNS++ GY
Sbjct: 231 KELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGY------- 283
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
KG + LF M V+
Sbjct: 284 ------------------------GFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACS 319
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L G+++H Y + RN+ QP + LN++L+ +Y CG + A +F MP+ +T
Sbjct: 320 QSAQLLEGKFVHGY-----IIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTT 374
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW MI + +G +AL LF M V PDAIT VL AC +++GR
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSK-----SFVEPDAITFTSVLAACSQLAALEKGR 429
Query: 378 RIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
I + R G + + G ++D+ ++ G ++EA G+ + +P
Sbjct: 430 EIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAFGVFKCLP 471
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 192/425 (45%), Gaps = 52/425 (12%)
Query: 17 QHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
+ + LL++ N ++L Q +H +VV GL + L+S Y++ + +A +F
Sbjct: 4 RKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDV 63
Query: 74 IDNP-STTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLR 131
I+NP ++ N ++ GY R+ +++ + +++ +P+ +TY +L AC GGL R
Sbjct: 64 IENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC--GGLRR 121
Query: 132 E--GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G+ +H ++ +G ++ V ++L+ YA E A +FD M + V WN++++
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISC 181
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y G F+ A R FG MRR E
Sbjct: 182 YYQSGKFEEALRY-------------------------------FGMMRRFGFEPDSVTI 210
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
DL GR IH + +V + S ++ AL+ MY CG + A +VF
Sbjct: 211 TTAISSCARLLDLDRGREIH----KELVNSGFRMDSF-VSAALVDMYGKCGQLEMAIEVF 265
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+MP ++ V+W SMI + +G G + LFK M S +GV+P TL L AC
Sbjct: 266 EQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYS-----EGVKPTLTTLTSTLMACSQ 320
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
+ + EG+ + + R I P I ++DL + G ++ A + + MP K W
Sbjct: 321 SAQLLEGKFVHGYIIRNR-IQPDIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWN 378
Query: 430 ALLGG 434
++ G
Sbjct: 379 VMISG 383
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 260/523 (49%), Gaps = 49/523 (9%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ T + SC + +L +IH ++V +G + + L+ Y QL+ A ++F +
Sbjct: 210 ITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
N + WN +I GY ++ +++M S +P T + L AC + L EG+
Sbjct: 270 NKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKF 329
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VHG ++ ++F+ ++L++ Y CG
Sbjct: 330 VHGYIIRNRIQPDIFLNSSLMDLY-------------------------------FKCGK 358
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ A +F MP VSW MI+G +G+ AL LFGEM ++ VE
Sbjct: 359 VESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAA 418
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L+ GR IH + +R + N+ + AL+ MYA CG + +A+ VF +P+R
Sbjct: 419 CSQLAALEKGREIHNLIVERNLGNNEV-----VMGALLDMYAKCGAVEEAFGVFKCLPER 473
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSWTSMI A+ G EAL LF M+ V+PD +T + +L AC HAG VD+
Sbjct: 474 DLVSWTSMITAYGSHGRVYEALELFAEMLQSN-----VKPDRVTFLAILSACSHAGLVDD 528
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND-ALWGALLGG 434
G F M +GI PRIEHY C++ LL RAG L EA+ ++++ P +D L L
Sbjct: 529 GLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSA 588
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C++HKN +L + L+ + D D ++ Y ++LSN+YA +W +V VR KM ++G+KK
Sbjct: 589 CRLHKNLDLGVEIAENLIDK-DPDDSSTY-IILSNMYASFGKWDEVRMVRSKMKDLGLKK 646
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVD 537
PG SWI+IN + F D +H H I ILS + SH++
Sbjct: 647 NPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYL--TSHME 687
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 47/404 (11%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L++C ++ ++ IH+ +V GL + + L+ Y ++ + A KLF + +
Sbjct: 111 SVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK 170
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I Y +S +++ + M EP+ T + +S+C R L G ++H
Sbjct: 171 DVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIH 230
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G+ + FV L++ Y G +E A VF+ M ++VV+WNS++ GY
Sbjct: 231 KELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGY------- 283
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
KG + LF M V+
Sbjct: 284 ------------------------GFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACS 319
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L G+++H Y + RN+ QP + LN++L+ +Y CG + A +F MP+ +T
Sbjct: 320 QSAQLLEGKFVHGY-----IIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTT 374
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSW MI + +G +AL LF M V PDAIT VL AC +++GR
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSK-----SFVEPDAITFTSVLAACSQLAALEKGR 429
Query: 378 RIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
I + R G + + G ++D+ ++ G ++EA G+ + +P
Sbjct: 430 EIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAFGVFKCLP 471
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 192/425 (45%), Gaps = 52/425 (12%)
Query: 17 QHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
+ + LL++ N ++L Q +H +VV GL + L+S Y++ + +A +F
Sbjct: 4 RKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDV 63
Query: 74 IDNP-STTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLR 131
I+NP ++ N ++ GY R+ +++ + +++ +P+ +TY +L AC GGL R
Sbjct: 64 IENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC--GGLRR 121
Query: 132 E--GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G+ +H ++ +G ++ V ++L+ YA E A +FD M + V WN++++
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISC 181
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y G F+ A R FG MRR E
Sbjct: 182 YYQSGKFEEALRY-------------------------------FGMMRRFGFEPDSVTI 210
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
DL GR IH + +V + S ++ AL+ MY CG + A +VF
Sbjct: 211 TTAISSCARLLDLDRGREIH----KELVNSGFRMDSF-VSAALVDMYGKCGQLEMAIEVF 265
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+MP ++ V+W SMI + +G G + LFK M S +GV+P TL L AC
Sbjct: 266 EQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYS-----EGVKPTLTTLTSTLMACSQ 320
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
+ + EG+ + + R I P I ++DL + G ++ A + + MP K W
Sbjct: 321 SAQLLEGKFVHGYIIRNR-IQPDIFLNSSLMDLYFKCGKVESAETIFKLMP-KTTTVSWN 378
Query: 430 ALLGG 434
++ G
Sbjct: 379 VMISG 383
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 271/543 (49%), Gaps = 47/543 (8%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
SG Q + ++L++C++++ Q+H+ + G+ + + T L+ Y +++
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A LF D WN ++ G+ S +++ + M + + T++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L++G+Q+H +V+ + ++FV + +++ Y
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY-------------------------- 545
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+ CG+ AR+VF+++P + V+WTT+I+GC + G +QAL + +MR A V+
Sbjct: 546 -----LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L+ G+ IH + + A + P V +L+ MYA CG I DA
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD---PFVM--TSLVDMYAKCGNIEDA 655
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
Y +F +M RS W +MI+ A+ G +EAL F M S G V PD +T I VL
Sbjct: 656 YGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRG-----VTPDRVTFIGVLS 710
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H+G + + F SM +T+G+ P IEHY C+VD LSRAG + EA ++ +MP + +
Sbjct: 711 ACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA 770
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
++ LL C++ + E V KL +D +A Y VLLSNIYA A +W++ ++ R
Sbjct: 771 TMYRTLLNACRVQGDKETGERVAEKLFT-MDPSDSAAY-VLLSNIYAAANQWENAVSARN 828
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
M + VKK PG SWI + VH FVAGD +H+ + IY + ++K+ + Y PD
Sbjct: 829 MMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEF 888
Query: 546 AFL 548
A +
Sbjct: 889 ALV 891
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 193/431 (44%), Gaps = 52/431 (12%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +++ S N+++ QIH VV G Q ++ ++ Y+ + + +A ++F +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE----GE 134
WN +I G ARS S+ + ++ + P+ FT + +L AC L E G
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCVGR 419
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVH L G + FV T LI+ Y+ G +E+A +F + SWN+++ G+
Sbjct: 420 QVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
++ A R+F M R + A A+ C
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGC--------------------------- 512
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G+ IH +V + + + + + ++ MY CG + A +VF ++P
Sbjct: 513 ----LVRLQQGKQIH-----AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS 563
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
V+WT++I + G ++AL + M + GV+PD T ++ AC ++
Sbjct: 564 PDDVAWTTVISGCVENGEEEQALFTYHQM-----RLAGVQPDEYTFATLVKACSLLTALE 618
Query: 375 EGRRIFAS-MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+G++I A+ M P + +VD+ ++ G +++A+GL M + + ALW A++
Sbjct: 619 QGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIV 675
Query: 434 GCQIHKNSELA 444
G H N+E A
Sbjct: 676 GLAQHGNAEEA 686
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A KLF D+ TVWN + Y ++ W++V+C+R M+ + + TY +LS
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L G+Q+HG V+ G+ V V + IN Y G V AR +F M + ++SWN
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN- 367
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEX 244
T+I+GCA+ G + +L LF ++ R+ +
Sbjct: 368 ------------------------------TVISGCARSGLEECSLRLFIDLLRSGLLPD 397
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+GR +H + + + ++ ALI +Y+ G + +
Sbjct: 398 QFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-----FVSTALIDVYSKGGKMEE 452
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F SW +M+ F +EAL LF M G + D IT
Sbjct: 453 AELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE-----KADQITFANAA 507
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV-----DLLSRAGFLDEAHGLIENM 419
A + +G++I A + I R HY V D+ + G + A + +
Sbjct: 508 KAAGCLVRLQQGKQIHAVV-----IKMRF-HYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 420 PLKPNDALWGALLGGC 435
P P+D W ++ GC
Sbjct: 562 P-SPDDVAWTTVISGC 576
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 191/479 (39%), Gaps = 73/479 (15%)
Query: 20 FTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI-- 74
F++L+ +LI + H+ +V +GL+ + L++ Y L A KLF
Sbjct: 17 FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 75 DNPSTTVWNHIIRGYARS---HTPWKSVECY---RQMVSTEAEPNGFTYSFLLSACVRGG 128
+ +N I+ YA + H K+ E + R + + T S L C+ G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
E + G + G +VFV L+N YA + +AR +FD M R VV WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 189 GYVSCGDFD----------------------------GARRVFDE--MPIR--------- 209
YV G D G + VF+ +R
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 210 ----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
+V W ++ Q G +A+ F +M ++RV L+LG
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+ IH V R V + N+ I+MY G + A ++F +M + +SW ++I
Sbjct: 317 KQIHG-----AVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE----GRRIFA 381
A+ GL + +L LF ++ G+ PD T+ VL AC ++E GR++
Sbjct: 372 GCARSGLEECSLRLFIDLLR-----SGLLPDQFTITSVLRACSS---LEESYCVGRQVHT 423
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+ GI ++D+ S+ G ++EA L N + A W A++ G + N
Sbjct: 424 CALKA-GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDN 480
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 271/543 (49%), Gaps = 47/543 (8%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
SG Q + ++L++C++++ Q+H+ + G+ + + T L+ Y +++
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A LF D WN ++ G+ S +++ + M + + T++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L++G+Q+H +V+ + ++FV + +++ Y
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY-------------------------- 545
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+ CG+ AR+VF+++P + V+WTT+I+GC + G +QAL + +MR A V+
Sbjct: 546 -----LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L+ G+ IH + + A + P V +L+ MYA CG I DA
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD---PFVM--TSLVDMYAKCGNIEDA 655
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
Y +F +M RS W +MI+ A+ G +EAL F M S G V PD +T I VL
Sbjct: 656 YGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRG-----VTPDRVTFIGVLS 710
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H+G + + F SM +T+G+ P IEHY C+VD LSRAG + EA ++ +MP + +
Sbjct: 711 ACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA 770
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
++ LL C++ + E V KL +D +A Y VLLSNIYA A +W++ ++ R
Sbjct: 771 TMYRTLLNACRVQGDKETGERVAEKLFT-MDPSDSAAY-VLLSNIYAAANQWENAVSARN 828
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
M + VKK PG SWI + VH FVAGD +H+ + IY + ++K+ + Y PD
Sbjct: 829 MMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEF 888
Query: 546 AFL 548
A +
Sbjct: 889 ALV 891
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 193/431 (44%), Gaps = 52/431 (12%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +++ S N+++ QIH VV G Q ++ ++ Y+ + + +A ++F +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE----GE 134
WN +I G ARS S+ + ++ + P+ FT + +L AC L E G
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCVGR 419
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVH L G + FV T LI+ Y+ G +E+A +F + SWN+++ G+
Sbjct: 420 QVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
++ A R+F M R + A A+ C
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGC--------------------------- 512
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G+ IH +V + + + + + ++ MY CG + A +VF ++P
Sbjct: 513 ----LVRLQQGKQIH-----AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS 563
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
V+WT++I + G ++AL + M + GV+PD T ++ AC ++
Sbjct: 564 PDDVAWTTVISGCVENGEEEQALFTYHQM-----RLAGVQPDEYTFATLVKACSLLTALE 618
Query: 375 EGRRIFAS-MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+G++I A+ M P + +VD+ ++ G +++A+GL M + + ALW A++
Sbjct: 619 QGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIV 675
Query: 434 GCQIHKNSELA 444
G H N+E A
Sbjct: 676 GLAQHGNAEEA 686
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A KLF D+ TVWN + Y ++ W++V+C+R M+ + + TY +LS
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L G+Q+HG V+ G+ V V + IN Y G V AR +F M + ++SWN
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN- 367
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEX 244
T+I+GCA+ G + +L LF ++ R+ +
Sbjct: 368 ------------------------------TVISGCARSGLEECSLRLFIDLLRSGLLPD 397
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+GR +H + + + ++ ALI +Y+ G + +
Sbjct: 398 QFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-----FVSTALIDVYSKGGKMEE 452
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F SW +M+ F +EAL LF M G + D IT
Sbjct: 453 AELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE-----KADQITFANAA 507
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV-----DLLSRAGFLDEAHGLIENM 419
A + +G++I A + I R HY V D+ + G + A + +
Sbjct: 508 KAAGCLVRLQQGKQIHAVV-----IKMRF-HYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 420 PLKPNDALWGALLGGC 435
P P+D W ++ GC
Sbjct: 562 P-SPDDVAWTTVISGC 576
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 191/479 (39%), Gaps = 73/479 (15%)
Query: 20 FTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI-- 74
F++L+ +LI + H+ +V +GL+ + L++ Y L A KLF
Sbjct: 17 FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 75 DNPSTTVWNHIIRGYARS---HTPWKSVECY---RQMVSTEAEPNGFTYSFLLSACVRGG 128
+ +N I+ YA + H K+ E + R + + T S L C+ G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
E + G + G +VFV L+N YA + +AR +FD M R VV WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 189 GYVSCGDFD----------------------------GARRVFDE--MPIR--------- 209
YV G D G + VF+ +R
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 210 ----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
+V W ++ Q G +A+ F +M ++RV L+LG
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+ IH V R V + N+ I+MY G + A ++F +M + +SW ++I
Sbjct: 317 KQIHG-----AVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE----GRRIFA 381
A+ GL + +L LF ++ G+ PD T+ VL AC ++E GR++
Sbjct: 372 GCARSGLEECSLRLFIDLLR-----SGLLPDQFTITSVLRACSS---LEESYCVGRQVHT 423
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+ GI ++D+ S+ G ++EA L N + A W A++ G + N
Sbjct: 424 CALKA-GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDN 480
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 271/543 (49%), Gaps = 47/543 (8%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
SG Q + ++L++C++++ Q+H+ + G+ + + T L+ Y +++
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A LF D WN ++ G+ S +++ + M + + T++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L++G+Q+H +V+ + ++FV + +++ Y
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMY-------------------------- 545
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+ CG+ AR+VF+++P + V+WTT+I+GC + G +QAL + +MR A V+
Sbjct: 546 -----LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
L+ G+ IH + + A + P V +L+ MYA CG I DA
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAFD---PFVM--TSLVDMYAKCGNIEDA 655
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
Y +F +M RS W +MI+ A+ G +EAL F M S G V PD +T I VL
Sbjct: 656 YGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRG-----VTPDRVTFIGVLS 710
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC H+G + + F SM +T+G+ P IEHY C+VD LSRAG + EA ++ +MP + +
Sbjct: 711 ACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA 770
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
++ LL C++ + E V KL +D +A Y VLLSNIYA A +W++ ++ R
Sbjct: 771 TMYRTLLNACRVQGDKETGERVAEKLFT-MDPSDSAAY-VLLSNIYAAANQWENAVSARN 828
Query: 486 KMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITG 545
M + VKK PG SWI + VH FVAGD +H+ + IY + ++K+ + Y PD
Sbjct: 829 MMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEF 888
Query: 546 AFL 548
A +
Sbjct: 889 ALV 891
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 193/431 (44%), Gaps = 52/431 (12%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +++ S N+++ QIH VV G Q ++ ++ Y+ + + +A ++F +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE----GE 134
WN +I G ARS S+ + ++ + P+ FT + +L AC L E G
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCVGR 419
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVH L G + FV T LI+ Y+ G +E+A +F + SWN+++ G+
Sbjct: 420 QVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
++ A R+F M R + A A+ C
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGC--------------------------- 512
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G+ IH +V + + + + + ++ MY CG + A +VF ++P
Sbjct: 513 ----LVRLQQGKQIH-----AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS 563
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
V+WT++I + G ++AL + M + GV+PD T ++ AC ++
Sbjct: 564 PDDVAWTTVISGCVENGEEEQALFTYHQM-----RLAGVQPDEYTFATLVKACSLLTALE 618
Query: 375 EGRRIFAS-MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+G++I A+ M P + +VD+ ++ G +++A+GL M + + ALW A++
Sbjct: 619 QGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR-SVALWNAMIV 675
Query: 434 GCQIHKNSELA 444
G H N+E A
Sbjct: 676 GLAQHGNAEEA 686
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 54/376 (14%)
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A KLF D+ TVWN + Y ++ W++V+C+R M+ + + TY +LS
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
L G+Q+HG V+ G+ V V + IN Y G V AR +F M + ++SWN
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWN- 367
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEX 244
T+I+GCA+ G + +L LF ++ R+ +
Sbjct: 368 ------------------------------TVISGCARSGLEECSLRLFIDLLRSGLLPD 397
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+GR +H + + + ++ ALI +Y+ G + +
Sbjct: 398 QFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-----FVSTALIDVYSKGGKMEE 452
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F SW +M+ F +EAL LF M G + D IT
Sbjct: 453 AELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE-----KADQITFANAA 507
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV-----DLLSRAGFLDEAHGLIENM 419
A + +G++I A + I R HY V D+ + G + A + +
Sbjct: 508 KAAGCLVRLQQGKQIHAVV-----IKMRF-HYDLFVISGILDMYLKCGEMKSARKVFNQI 561
Query: 420 PLKPNDALWGALLGGC 435
P P+D W ++ GC
Sbjct: 562 P-SPDDVAWTTVISGC 576
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 191/479 (39%), Gaps = 73/479 (15%)
Query: 20 FTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI-- 74
F++L+ +LI + H+ +V +GL+ + L++ Y L A KLF
Sbjct: 17 FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 75 DNPSTTVWNHIIRGYARS---HTPWKSVECY---RQMVSTEAEPNGFTYSFLLSACVRGG 128
+ +N I+ YA + H K+ E + R + + T S L C+ G
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
E + G + G +VFV L+N YA + +AR +FD M R VV WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 189 GYVSCGDFD----------------------------GARRVFDE--MPIR--------- 209
YV G D G + VF+ +R
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVC 256
Query: 210 ----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
+V W ++ Q G +A+ F +M ++RV L+LG
Sbjct: 257 DDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELG 316
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+ IH V R V + N+ I+MY G + A ++F +M + +SW ++I
Sbjct: 317 KQIHG-----AVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVIS 371
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE----GRRIFA 381
A+ GL + +L LF ++ G+ PD T+ VL AC ++E GR++
Sbjct: 372 GCARSGLEECSLRLFIDLLR-----SGLLPDQFTITSVLRACSS---LEESYCVGRQVHT 423
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
+ GI ++D+ S+ G ++EA L N + A W A++ G + N
Sbjct: 424 CALKA-GIVLDSFVSTALIDVYSKGGKMEEAELLFHNQD-GFDLASWNAMMHGFTVSDN 480
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 163/522 (31%), Positives = 261/522 (50%), Gaps = 47/522 (9%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C NI NL +H V S++ LL Y L A ++F + +
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 360
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W II Y R ++ + +M S P+ +T + ++ AC L +G VH
Sbjct: 361 TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 420
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V+ G SN+ V LIN YA CG +
Sbjct: 421 SYVIKNGMGSNLPVTNALINMYA-------------------------------KCGSVE 449
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
AR VF ++P++++VSW TMI G +Q +AL LF +M++ + +
Sbjct: 450 EARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACA 508
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L GR IH ++ +R + + + AL+ MYA CG++ A +F +P++
Sbjct: 509 GLAALDKGREIHGHILRRGYFSD-----LHVACALVDMYAKCGLLVLAQLLFDMIPKKDL 563
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SWT MI + G G EA+ F M + G+ PD + +L AC H+G ++EG
Sbjct: 564 ISWTVMIAGYGMHGFGNEAISTFNEM-----RIAGIEPDESSFSAILNACSHSGLLNEGW 618
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+ F SM G+ P++EHY C+VDLL+R G L +A+ IE+MP+KP+ +WG LL GC+I
Sbjct: 619 KFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRI 678
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H + +LA V + EL+ D Y V+L+N+YA A++W++V +R++M + G K+ PG
Sbjct: 679 HHDVKLAEKVAEHIF-ELEPDNTR-YYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPG 736
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
SWI++ G + FVAG+ H + I +LS++ Q + Y
Sbjct: 737 CSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDY 778
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 46/417 (11%)
Query: 21 TLLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++LQ C ++++ ++HS ++ NG+S + KL+ Y+ L K+F I N
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+WN ++ YA+ +SV +++M N +T++ +L G ++E ++VH
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G VL G+ SN V NS++A Y G +
Sbjct: 219 GYVLKLGFGSNTAV-------------------------------VNSLIAAYFKFGGVE 247
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +FDE+ +VVSW +MI GC G L +F +M VE
Sbjct: 248 SAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACA 307
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+L LGR +H + + + V +N L+ MY+ CG + A +VF KM +
Sbjct: 308 NIGNLSLGRALHGFGVKACFSE-----EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTI 362
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSWTS+I A+ ++GL +A+GLF M S GVRPD T+ ++ AC + +D+GR
Sbjct: 363 VSWTSIIAAYVREGLYSDAIGLFDEMQS-----KGVRPDIYTVTSIVHACACSSSLDKGR 417
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + + + G+ + ++++ ++ G ++EA + +P+K + W ++GG
Sbjct: 418 DVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 472
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 201/459 (43%), Gaps = 59/459 (12%)
Query: 18 HVFTLLQSC----NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
+ FT + C ++ ++H V+ G T ++ L++ Y ++ AH LF
Sbjct: 196 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 255
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ P WN +I G + +E + QM+ E + T +L AC G L G
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+HG + + V L++ Y+ G + A VF MG ++VSW SI+A YV
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 194 GDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
G + A +FDEM + ++ + T+++ CA C +L
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA----CSSSLD----------------- 414
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
GR +H Y V +N ++ + NALI+MYA CG + +A VF
Sbjct: 415 --------------KGRDVHSY-----VIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+K+P + VSW +MI +++ L EAL LF M +PD IT+ VL AC
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ------FKPDDITMACVLPACAG 509
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGC-MVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
+D+GR I + R S H C +VD+ ++ G L A L + +P K + W
Sbjct: 510 LAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISW 566
Query: 429 GALLGGCQIHK-NSELASVVEPKLVAELDTDGAAGYLVL 466
++ G +H +E S +A ++ D ++ +L
Sbjct: 567 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAIL 605
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 118/297 (39%), Gaps = 42/297 (14%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
+Y +L C L +G++VH +++ G + + L+ Y G + Q R +FD +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
V WN +++ Y G+F ++++SLF
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNF-------------------------------RESVSLFK 184
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+M++ V G +K + +H YV + N + N+LI
Sbjct: 185 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA-----VVNSLIAA 239
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y G + A+ +F ++ + VSW SMI G L +F M+ + GV
Sbjct: 240 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML-----ILGVEV 294
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
D TL+ VL AC + G + GR + + S + ++D+ S+ G L+ A
Sbjct: 295 DLTTLVSVLVACANIGNLSLGRALHGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGA 350
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 249/509 (48%), Gaps = 44/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH+ + N + T LL Y L +A K+F+T++ + W+ +I GY +
Sbjct: 232 IHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDS 291
Query: 95 PWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ Y M+ P T + +L AC + L+ G+++H
Sbjct: 292 ISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLH---------------- 335
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+ GM + V NS+++ Y CG D A DEM ++ VS
Sbjct: 336 --------------CHMIKSGMDLDTTVG-NSLISMYAKCGIMDNAVGFLDEMIAKDTVS 380
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
++ +I+GC Q G ++AL +F +M+ + + L+ G H Y
Sbjct: 381 YSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTV 440
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
R + + NA+I MY+ CG I + ++F +M R +SW +MI+ + GL
Sbjct: 441 VRGFTND-----TSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLC 495
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EAL LF+ + + G ++PD +TLI VL AC H+G V EG+ F+SM++ + I PR+
Sbjct: 496 VEALSLFQELQALG-----LKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
HY CMVDLL+RAG LDEA+ I+ MP PN +WGALL C+ HKN E+ V K+
Sbjct: 551 AHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKI-- 608
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+L G VL+SNIY+ RW D +R G KK PG SW++I+GV+H F+ G
Sbjct: 609 QLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGG 668
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
+H S I + L E++ Q Y D
Sbjct: 669 HQSHPQSASINKKLQELLVQMKKLGYRAD 697
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 186/415 (44%), Gaps = 48/415 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T+L ++I+ +++Q A +F I PS +WN +IR YA S +S+ Y M+
Sbjct: 45 TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVT 104
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P FT+ FLL AC L+ G +H + G +++V T L++ YA G + QA+ +
Sbjct: 105 PTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTL 164
Query: 172 FDGMGQ--RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ 229
F+ + R +V+WN+++A + S+ + A Q
Sbjct: 165 FNSISHQDRDIVAWNAMIAAF----------------------SFHALHA---------Q 193
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
+ +M++A V L G+ IH Y RN +V L
Sbjct: 194 TIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAY-----YIRNFFFDNVVLQ 248
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
AL+ MYA C ++ A ++F + +++ V W++MI + +AL L+ M+
Sbjct: 249 TALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLC---- 304
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+ G+ P TL +L AC + G+++ M ++ G+ ++ + ++ G +
Sbjct: 305 IYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIM 363
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYL 464
D A G ++ M K + + A++ GC + +E A ++ ++ + G A YL
Sbjct: 364 DNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLI----FRQMQSSGIAPYL 413
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 158/365 (43%), Gaps = 55/365 (15%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL++C+++Q L IH+ + GLS + T LL Y L A LF++I +
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 79 TTV--WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ WN +I ++ +++ QM PN T +L + L +G+ +
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H + + NV ++T L++ YA + AR +F+ + +++ V W++++ GYV
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292
Query: 197 DGARRVFDEMPI-----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
A ++D+M + TM+ CAQ
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQ---------------------------- 324
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
DLK G+ +H + + ++ + N+LI MYA CG++ +A +
Sbjct: 325 -------LTDLKRGKKLHCH-----MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M + TVS++++I + G ++AL +F+ M S G+ P T+I +L AC H
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS-----SGIAPYLETMIALLPACSHLA 427
Query: 372 FVDEG 376
+ G
Sbjct: 428 ALQHG 432
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L++C + +L ++H ++ +G+ T + L+S Y + +A +
Sbjct: 317 TMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAK 376
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
T ++ II G ++ K++ +RQM S+ P T LL AC L+ G H
Sbjct: 377 DTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G +V+G+ ++ + +I+ Y+ G + +R +FD M R ++SWN+++ GY G
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496
Query: 198 GARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRR 239
A +F E+ + V+ +++ C+ G + F M +
Sbjct: 497 EALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQ 542
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/515 (30%), Positives = 257/515 (49%), Gaps = 15/515 (2%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C + +L +H++++ S L+ Y L A ++F ++
Sbjct: 283 SVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREH 342
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I G ++ + QM + + F +L C GE +H
Sbjct: 343 DHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLH 402
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G + G S+ V +I YA G ++A VF M R+ +SW +++ + GD
Sbjct: 403 GYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIG 462
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
AR FD MP RN+V+W +M++ Q G ++ L L+ MR V+
Sbjct: 463 KARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACA 522
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
+KLG + + + ++ N V + N+++ MY+ CG+I +A F + +
Sbjct: 523 DLAIVKLGMQVVTHATKFGLSLN-----VSVANSIVTMYSRCGLIKEAKNTFDSIDDKDL 577
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SW +M+ AFA+ GLG + + F+ M+ +P+ I+ + VL C H G V EG+
Sbjct: 578 ISWNAMLAAFAQNGLGIKVIDTFEDMLKTEC-----KPNHISYVSVLSGCSHMGLVAEGK 632
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
F SM R +GISP EH+ CMVDLL RAG L++A LIE MP KPN +W ALLG C++
Sbjct: 633 HYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRV 692
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H + LA KL+ ELD +G+ GY VLLSN+Y+ + +V +R+ M G++ G
Sbjct: 693 HHDLRLAETAAKKLM-ELDVEGSEGY-VLLSNMYSESGELDNVADMRKLMKVKGIRTSRG 750
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
SWI+++ VH F + +H +Y L E++K
Sbjct: 751 CSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMK 785
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 188/474 (39%), Gaps = 98/474 (20%)
Query: 21 TLLQSCNNIQN---LIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+++++C ++ + IQ+H+ V G +T I ++ Y+ + A +F I+ P
Sbjct: 151 SVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERP 210
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEA--------------------------- 110
S WN +I GY++ + P+K+++ + +M +
Sbjct: 211 SLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMC 270
Query: 111 ----EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
PN TY +LSAC L+ G +H +L + ++ LI+ YA G ++
Sbjct: 271 NQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLD 330
Query: 167 QARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR 226
A+ VF + + +SWNS++ G V G
Sbjct: 331 LAKRVFKSLREHDHISWNSLITGVV-------------------------------HFGL 359
Query: 227 CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+ AL LF +MRR+ V G +H Y ++ S
Sbjct: 360 GEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGY-----TIKSGMGSSA 414
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM--- 343
+ NA+I MYA CG A VF MP R+T+SWT+MI AF++ G +A G F M
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474
Query: 344 ------------VSDGAG-----------VDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
V +G +GV+PD IT + AC V G ++
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV 534
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ +G+S + +V + SR G + EA +++ K + W A+L
Sbjct: 535 THATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK-DLISWNAMLAA 586
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 173/392 (44%), Gaps = 20/392 (5%)
Query: 49 NIIT--KLLSFYIASDQLQHAHKLFST--IDNPSTTVWNHIIRGYARSHTPWKSVECYRQ 104
NI T ++ ++S ++ A KLF + + W +I GY+++ +S E +
Sbjct: 73 NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132
Query: 105 MVSTEAEP----NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
M+ + + F+++ ++ AC G R Q+H +V G+ ++ +++ Y
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYV 192
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
G V+ A VF + + S+ WNS++ GY A ++F+ MP R+ VSW T+I+
Sbjct: 193 KCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISI 252
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
+Q G Q L++F EM DLK G +H RI+ R
Sbjct: 253 FSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLH----ARIL-RM 307
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
+ + N LI MYA CG + A +VF + + +SW S+I GLG++AL LF
Sbjct: 308 EHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILF 367
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M V D L +L C + G + ++ G+ ++
Sbjct: 368 NQMRR-----SSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKS-GMGSSAPVGNAII 421
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
+ ++ G D+A + MPL+ N W A++
Sbjct: 422 TMYAKCGDTDKADLVFRLMPLR-NTISWTAMI 452
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 53/341 (15%)
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
++H +++ G S++F+ NL++ Y+ G A VF R++ +WN+++ VS
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 193 CGDFDGARRVFDEMPIR--NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE----XXX 246
A ++FDEMP+R + VSWTTMI+G +Q G ++ F M R +
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQ--------------------------RIVARN 280
GD +L +H V + V +
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
++PS+ N++I+ Y+ A Q+F +MP+R VSW ++I F++ G G + L +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH----- 395
M + G P+ +T VL AC + G + A + R+EH
Sbjct: 267 VEMCN-----QGFSPNFMTYGSVLSACASTSDLKWGAHLHARI-------LRMEHSLDLV 314
Query: 396 YGC-MVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGG 434
+G ++D+ ++ G LD A + ++ L+ +D + W +L+ G
Sbjct: 315 FGNGLIDMYAKCGCLDLAKRVFKS--LREHDHISWNSLITG 353
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 242/494 (48%), Gaps = 45/494 (9%)
Query: 25 SCNNIQNLIQI---HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
+C N++ + H +V GL + + +++ Y + A K+F I
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN ++ GYA+ ++VE + ++ EP+ + +L AC G L G V G V
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ +G N ++ + LI+ Y+ CG+ +R
Sbjct: 246 VERGMKVNSYIGSALISMYS-------------------------------KCGELVSSR 274
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
R+FD MP R+ ++W I+ AQ G +A+SLF M+ V+ G
Sbjct: 275 RIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIG 334
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
L LG+ + Y R + Q + + ALI MYA CG + A +VF MP+++ SW
Sbjct: 335 ALDLGKQMDEYATHRGL-----QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASW 389
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
+MI A A G KEAL LF+ M +G RP+ IT + +L AC HAG VDEG R+F
Sbjct: 390 NAMISALASHGKAKEALSLFERMSDEGGSA---RPNDITFVSLLSACVHAGLVDEGYRLF 446
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
M+ +G+ P+IEHY CMVDLLSRAG L EA +IE MP KP++ GAL CQ KN
Sbjct: 447 DMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKN 506
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
++ V +++ ELD + Y ++ S IY W D +R M E GV K PG SW
Sbjct: 507 VDIGERV-IQMLLELDPSNSGNY-IISSKIYENLNMWDDAARMRALMRENGVTKTPGCSW 564
Query: 501 IQINGVVHDFVAGD 514
I++ + +F++GD
Sbjct: 565 IEVGNQLREFLSGD 578
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 203/436 (46%), Gaps = 55/436 (12%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID-NP 77
+ +LL+ C + + L QIH+Q ++ + + +++++ +S ++ +FS I +P
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL----KDFTYSTLIFSHITPHP 79
Query: 78 STTVWNHIIRGYARS-HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ +N ++R + H ++ Y QM + PN FT+ F+ AC +R
Sbjct: 80 NDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLA 139
Query: 137 HGIVLVKGYCSNVFVETNLINFY--AGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
H V G ++ +++ Y G GV AR VFD + ++ +VSWNS+L+GY
Sbjct: 140 HCEVFKLGLDNDHHTVNSMVTMYFRCGENGV--ARKVFDEITEKDLVSWNSLLSGY---- 193
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXX 253
A+ G ++A+ +FG +R E
Sbjct: 194 ---------------------------AKLGFAREAVEVFGRLREESGFEPDEMSLVSVL 226
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
GDL+LGRW+ +V +R + N + +ALI MY+ CG + + ++F MP
Sbjct: 227 GACGELGDLELGRWVEGFVVERGMKVNSY-----IGSALISMYSKCGELVSSRRIFDGMP 281
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R ++W + I A+A+ G+ EA+ LF +M +GV P+ +TL VL AC G +
Sbjct: 282 SRDFITWNAAISAYAQNGMADEAISLFHSMKE-----NGVDPNKVTLTAVLSACASIGAL 336
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
D G+++ G+ I ++D+ ++ G L+ A + +MP K NDA W A++
Sbjct: 337 DLGKQMDEYATHR-GLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK-NDASWNAMIS 394
Query: 434 GCQIH-KNSELASVVE 448
H K E S+ E
Sbjct: 395 ALASHGKAKEALSLFE 410
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 258/476 (54%), Gaps = 21/476 (4%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IHS ++ G TNI KLL YI S L++A ++F + + + + +N++I GY ++
Sbjct: 58 KIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNG 117
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSAC---VRGGLLRE-GEQVHGIVLVKGYCSNV 149
+S++ + Q+ + +P+GFT+S +L A V G++ + G VH +L +
Sbjct: 118 QVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEKDD 177
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
+ T LI+ Y G V R VFD M +++V+S S+++GY++ G FD A +F + +
Sbjct: 178 VLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDK 237
Query: 210 NVVSWTTMIAGCAQKGR-CKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+VV + MI G ++ ++L ++ +M+R ++G
Sbjct: 238 DVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIG--- 294
Query: 269 HWYVQQRIVARNQQQP---SVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+++ A+ + P ++L +ALI MY+ CG + DA +VF M +++ SWTSMI
Sbjct: 295 -----EQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMID 349
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ K G EAL LFK M + + + P+ +T + L AC HAG V+ G IF SM
Sbjct: 350 GYGKNGFPDEALELFKKMQIEYS----ITPNFVTFLSALTACAHAGLVERGWEIFQSMES 405
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
+ + PR+EHY CMVDLL RAG+L++A + MP +PN +W ALL C+IH N E+A
Sbjct: 406 EYKLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAK 465
Query: 446 VVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
+ +L +L+ G G V LSN A A +W +V +R+ M E G+ K SW+
Sbjct: 466 LAANELF-KLNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 281/531 (52%), Gaps = 43/531 (8%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+RS ++++ +I+ L Q H+ ++++G + ++TKLL+ A+ + + +LF
Sbjct: 14 QRSKSVEYEAVIRAGPHIRPLQQAHAHLIVSGRHRSRALLTKLLTLSSAAGSIAYTRRLF 73
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
++ +P + ++N +I+ ++ ++ YR+M+S+ +P+ +T++ + AC L+
Sbjct: 74 LSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVFKACAHLSALK 133
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
G +H V V G+ SN FV+ ++ FYA +
Sbjct: 134 IGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSAL-------------------------- 167
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
C AR+VFD+MP R+VV+W TMI+G G +A++LF +M V
Sbjct: 168 -CV----ARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVS 222
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G L+LG W++ IV+ N + +V L +LI+M++ CG + A VF
Sbjct: 223 VSSACSQIGSLELGCWVY----DSIVS-NGIRVNVILGTSLINMFSRCGDVRRARAVFDS 277
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+ + + ++WT+MI + G G EA+ LF M + G+ P+ +T + VL AC HAG
Sbjct: 278 ISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKE----RGLVPNTVTFVAVLSACAHAG 333
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM-PLKPNDALWGA 430
+ EGR++FASM +G+ P +EH+ CMVD+L +AG L EA+ I+ + P++ A+W A
Sbjct: 334 LIHEGRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTA 393
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
+LG C++HKN +L L++ L+ + + Y VLLSN+YA A R V +VR MI+
Sbjct: 394 MLGACKMHKNYDLGVEAAQHLIS-LEPENPSNY-VLLSNMYALAGRMDRVESVRNVMIQR 451
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
G+KK G S I +N + F GD H + IY+ L +I + Y P
Sbjct: 452 GIKKQAGYSSIDVNNKTYLFRMGDKAHPETNEIYQYLDGLIWRCKEAGYAP 502
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 266/531 (50%), Gaps = 33/531 (6%)
Query: 26 CNNIQNLIQIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDN----PSTT 80
CN I + +Q + +G+ + I+ + +++ Y + A ++F + P+
Sbjct: 11 CNRIDD-----AQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLV 65
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN +I G+ ++V + +MVS P+G T S +L + G+QVHG V
Sbjct: 66 SWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYV 125
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ G S+ +V + L++ Y G + VFD + Q + S N+ L G G D A
Sbjct: 126 IKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTAL 185
Query: 201 RVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
VF + NVV+WT++IA C Q G+ +AL LF +M+ VE
Sbjct: 186 DVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPAC 245
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
L G+ IH + ++ + + V + +ALI MYA+CG I + F +MP R+
Sbjct: 246 GNISALTHGKEIHCFSLRKGIFDD-----VYVGSALIDMYANCGRIRLSQNCFDEMPFRN 300
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VSW S++ +A G KE + +F M+ G +PD+IT VL AC G +EG
Sbjct: 301 LVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQ-----KPDSITFTSVLSACTQNGLTEEG 355
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
F SM++ + + P++EHY CMV LLSR G L+EA+ +I+ MP +P+ +WGALL C+
Sbjct: 356 WHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCR 415
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H N L + KL L+ D Y +LLSNIYA W + VR M G++K P
Sbjct: 416 VHHNLSLGEIAAEKLFV-LEPDNPGNY-ILLSNIYASKGMWDEENRVRDMMKSKGLQKNP 473
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
G SWI+I VH V+GD +H + EI+++S S E +G
Sbjct: 474 GCSWIEIGHRVHTLVSGDKSHPQ-------MKEILEKSEKLSIEIKESGCL 517
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 51/325 (15%)
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR--- 209
++L++ Y ++ A+ +FDGM R V+ W++++AGY G+ D A+ VF EM
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
N+VSW MIAG G +A+ LF EM D+ +G+ +
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQV 121
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR------------- 315
H YV + + ++ S AL+ MY CG + +VF ++ Q
Sbjct: 122 HGYVIKLGLESDKYVVS-----ALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLS 176
Query: 316 ----------------------STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
+ V+WTS+I + + G EAL LF+ M + DGV
Sbjct: 177 RNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQA-----DGV 231
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
P+A+T+ ++ AC + + G+ I R GI + ++D+ + G + +
Sbjct: 232 EPNAVTIPSLIPACGNISALTHGKEIHCFSLRK-GIFDDVYVGSALIDMYANCGRIRLSQ 290
Query: 414 GLIENMPLKPNDALWGALLGGCQIH 438
+ MP + N W +++ G +H
Sbjct: 291 NCFDEMPFR-NLVSWNSIMSGYAMH 314
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 257/510 (50%), Gaps = 45/510 (8%)
Query: 35 IHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+ +Q++ + + QK ++S Y +++ A KLF + + WN +I GY
Sbjct: 115 VDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQG 174
Query: 94 TPWKSVECYRQMVSTEAEP-NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++++ +R M E+ N FT S L+A LR G+++HG ++
Sbjct: 175 WYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI----------- 223
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
R G+E V W ++L Y CG + AR +FD+M +++V
Sbjct: 224 ---------RSGLELDE-----------VVWTALLDLYGKCGSLNEARGIFDQMADKDIV 263
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SWTTMI C + GR K+ SLF ++ + V ++G+ +H Y+
Sbjct: 264 SWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYM 323
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
R P +AL+H+Y+ CG A +VF +MP+ VSWTS+I+ +A+ G
Sbjct: 324 -----TRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQ 378
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
AL F++++ G +PD IT + VL AC HAG VD G F S+ G+
Sbjct: 379 PDMALQFFESLLRSG-----TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHT 433
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+HY C++DLL+R+G EA +I+NMP+KP+ LW +LLGGC+IH N ELA K +
Sbjct: 434 ADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERA-AKAL 492
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
EL+ + A Y+ LSNIYA A W + VR M G+ K PG+SWI+I VH F+
Sbjct: 493 FELEPENPATYIT-LSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLV 551
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
GD +H I+E L E+ K+ + Y D
Sbjct: 552 GDTSHPKISDIHEYLGELSKKMKEEGYVAD 581
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 13/325 (4%)
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARH 170
+P+ YS L++AC+R L G++VH + + + LI+ YA G + A+
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
+FD + Q+ + SWN++++GY + G + AR++FDEMP R+ SW +I+G +G +A
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEA 179
Query: 231 LSLFGEMRRARVEX-XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
L LF M+ L+ G+ IH Y + R+ + +
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY-----LIRSGLELDEVVW 234
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
AL+ +Y CG + +A +F +M + VSWT+MI + G KE LF+ ++
Sbjct: 235 TALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMG---- 290
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
GVRP+ T VL AC G+ + M R G P +V + S+ G
Sbjct: 291 -SGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV-GYDPFSFAASALVHVYSKCGNT 348
Query: 410 DEAHGLIENMPLKPNDALWGALLGG 434
+ A + MP +P+ W +L+ G
Sbjct: 349 ETARRVFNQMP-RPDLVSWTSLIVG 372
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH ++ +GL + T LL Y L A +F + + W +I
Sbjct: 217 EIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDG 276
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ +R ++ + PN +T++ +L+AC + G++VHG + GY F +
Sbjct: 277 RKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAAS 336
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM----PIR 209
L++ Y+ G E AR VF+ M + +VSW S++ GY G D A + F+ +
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKP 396
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+ +++ +++ C G L F ++
Sbjct: 397 DEITFVGVLSACTHAGLVDIGLEYFHSVK 425
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 242/495 (48%), Gaps = 43/495 (8%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LL Y S ++ A +LF + W+ +I YA+S ++++ + +M T PN
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT++ +L AC L G+Q+H VL G SNVFV
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVS--------------------- 376
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
N+I+ Y CG+ + + ++F+E+P RN V+W T+I G Q G ++A++L
Sbjct: 377 ----------NAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNL 426
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F M ++ L+ G IH + + + N+LI
Sbjct: 427 FTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIH-----SLTIKTMYNKDTVVANSLI 481
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MYA CG I DA F KM +R VSW +MI ++ G+ EAL LF M
Sbjct: 482 DMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDC----- 536
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+P+ +T + VL AC +AG + +G+ F SM++ + I P IEHY CMV LL R G DEA
Sbjct: 537 KPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAM 596
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
LI + +P+ +W ALLG C IHK +L V + V E++ A + VLLSN+YA
Sbjct: 597 KLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVC-AQHVLEMEPHDDATH-VLLSNMYAT 654
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
A RW +V VR+ M + V+K PG SW++ GVVH F GD +H I +L + K+
Sbjct: 655 AGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKK 714
Query: 534 SHVDSYEPDITGAFL 548
+ Y PD L
Sbjct: 715 TRDAGYVPDCNAVLL 729
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 180/401 (44%), Gaps = 43/401 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+H ++ G S LL+FY+ S+ LQ A KLF + +T + + +GY+R H
Sbjct: 56 HLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDH 115
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ ++ E N F ++ LL V L +H V G+ ++ FV T
Sbjct: 116 QFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGT 175
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI+ Y+ RG V+ ARHVFD + + +VSW ++A Y ++ + ++F++M I
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP 235
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
I+G K L L +G+ +H
Sbjct: 236 NNFTISGAL-----KSCLGLEA--------------------------FNVGKSVH---- 260
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + AL+ +YA G I DA ++F +MP+ + W+ MI +A+
Sbjct: 261 -GCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRS 319
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
KEAL LF M V P+ T VL AC + +D G++I + + + +G++ +
Sbjct: 320 KEALDLFLRMRQ-----TSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLK-FGLNSNV 373
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++D+ ++ G ++ + L E +P + ND W ++ G
Sbjct: 374 FVSNAIMDVYAKCGEIENSMKLFEELPDR-NDVTWNTIIVG 413
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 169/387 (43%), Gaps = 43/387 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T L+ Y + A +F I W ++ YA + +S++ + QM +
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN FT S L +C+ G+ VHG L Y ++FV L+ YA G + A+
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ-- 292
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
R+F+EMP +++ W+ MIA AQ R K+AL
Sbjct: 293 -----------------------------RLFEEMPKTDLIPWSLMIARYAQSDRSKEAL 323
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
LF MR+ V L LG+ IH V + +V ++NA
Sbjct: 324 DLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIH-----SCVLKFGLNSNVFVSNA 378
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
++ +YA CG I ++ ++F ++P R+ V+W ++I+ + + G G+ A+ LF M+
Sbjct: 379 IMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLE-----H 433
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
++P +T VL A ++ G +I + +T + ++D+ ++ G +++
Sbjct: 434 DMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVV-ANSLIDMYAKCGRIND 492
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIH 438
A + M K ++ W A++ G +H
Sbjct: 493 ARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++LQ+C + +L QIHS V+ GL+ + ++ Y +++++ KLF + +
Sbjct: 343 SVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR 402
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN II GY + +++ + M+ + +P TYS +L A L G Q+H
Sbjct: 403 NDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIH 462
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+ + Y + V +LI+ YA G + AR FD M +R VSWN+++ GY G
Sbjct: 463 SLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSM 522
Query: 198 GARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
A +FD M N +++ +++ C+ G + + F M +
Sbjct: 523 EALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSK 568
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 235/448 (52%), Gaps = 14/448 (3%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
+L+ Y + + A +LF I + W +I GY + +++E YR M+ T PN
Sbjct: 257 MLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPN 316
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
L+SAC RG + +G Q+HG V+ +G+ F++T +I FYA G ++ A F+
Sbjct: 317 EVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFE 376
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
+ + SWN++ AG++ G D A + FD+M +R+V SW+TMI+G AQ K AL L
Sbjct: 377 VGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALEL 436
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F +M ++ G L+ G+ H Y++ + N L ALI
Sbjct: 437 FHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDN-----LRAALI 491
Query: 294 HMYASCGVIGDAYQVFTKM-PQRSTVS-WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
MYA CG I A Q F ++ + S+VS W ++I A G L +F M
Sbjct: 492 DMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQR-----F 546
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
++P+ IT I VL ACCHAG V+ G+RIF +M + + P I+HYGCM+D+L RAG L+E
Sbjct: 547 HIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEE 606
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
A +I +MP++ + +WG LL C+ H N + L + G G VLLSNIY
Sbjct: 607 AEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHG--GGKVLLSNIY 664
Query: 472 AFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
A A +W++V VR M + + PG S
Sbjct: 665 ANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 208/462 (45%), Gaps = 49/462 (10%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLL-SFYIASDQLQHAHKLFST 73
IQ + + C +I+N +Q++ +G + ++ ++ S Y+ + Q+ +A KLF
Sbjct: 90 IQNSLINMYAKCGDIKN-----AQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDV 144
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ N + +I G+ ++ +++E ++ M S PN T ++SAC G +
Sbjct: 145 MPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNC 204
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
VHG+V+ V V TNL++ Y GV +AR +FD M +R++V+WN +L GY
Sbjct: 205 RMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKT 264
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G D AR +FD + ++V+SW TMI G QKGR ++AL E+ RA ++
Sbjct: 265 GLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREAL----EIYRAMLQTGHGPNEVMI 320
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC-------------- 299
W + +V R + + +I+ YA+C
Sbjct: 321 VNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF-IQTTIIYFYAACGMMDLACLQFEVGV 379
Query: 300 -----------------GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
G++ A + F KM R SW++MI +A+ K AL LF
Sbjct: 380 KDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHK 439
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M++ G++P+ +T++ V A G + EG+ M R+ I ++D+
Sbjct: 440 MLA-----GGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM-RSESIPFNDNLRAALIDM 493
Query: 403 LSRAGFLDEAHGLIENMPLKPND-ALWGALLGGCQIHKNSEL 443
++ G ++ A + + + + W A++ G H ++ +
Sbjct: 494 YAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASM 535
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 10/237 (4%)
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L +C + +G Q+H ++ G N F++ +LIN YA G ++ A+ +FDG
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
VS N +++GYV G D AR++FD MP + VS+TTMI G Q G ++AL +F +MR
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
V G++ R +H V + V V ++ L+H Y C
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVV-----GLVIVSTNLMHAYCLCS 234
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF-----KTMVSDGAGVDG 352
+ +A ++F +MP+R+ V+W M+ +AK GL EA LF K ++S G +DG
Sbjct: 235 GVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDG 291
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYI 59
I R + +G + + L+ +C ++ Q+H VV G I T ++ FY
Sbjct: 304 IYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYA 363
Query: 60 A---------------SDQLQ----------------HAHKLFSTIDNPSTTVWNHIIRG 88
A D L+ HA K F + W+ +I G
Sbjct: 364 ACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISG 423
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
YA+S P ++E + +M++ +PN T + SA G L+EG+ H + + N
Sbjct: 424 YAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFN 483
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQR--SVVSWNSILAGYVSCGDFDGARRVFDEM 206
+ LI+ YA G + A F+ + SV WN+I+ G S G VF +M
Sbjct: 484 DNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDM 543
Query: 207 P---IR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
I+ N +++ +++ C G + +F M+ A
Sbjct: 544 QRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSA 581
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 269/552 (48%), Gaps = 84/552 (15%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQK------TNIITKLLSFYIASDQLQHAHKLFSTID 75
L + NI +L QIH+ + L L Q ++ ++L F L +AHKLF T+
Sbjct: 16 FLNNAKNISHLKQIHA-LFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLFDTMP 74
Query: 76 NPSTT-VWNHIIRGYARSHTPW-KSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
N S +W +IR + HT + + + +M P+GFT+S +L+AC R EG
Sbjct: 75 NCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFEG 134
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG------------------- 174
+QVH ++ G+ N V+T L++ YA G V AR VFDG
Sbjct: 135 KQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKA 194
Query: 175 ------------MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
MG+R+ +W +++AGY + GD A ++D M ++ V+W MIAG
Sbjct: 195 GRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYG 254
Query: 221 -----------------------------C-AQKGRCKQALSLFGEMRRARVEXXXXXXX 250
C AQ G ++A+ ++ +MRRA+++
Sbjct: 255 KLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMV 314
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
D+++ + + +++ + ++NALIHM + CG I A++ F
Sbjct: 315 GAISACAQLRDIRMSNSLTYNIEEGFCEKTHI-----VSNALIHMQSKCGNIDLAWREFN 369
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
M R ++++MI AFA+ G ++A+ LF M +G ++P+ +T + VL AC +
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEG-----LKPNQVTFVGVLNACSTS 424
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G ++EG R F M +GI P EHY CMVDLL RAG L++A+ LI+ + WG+
Sbjct: 425 GLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGS 484
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+++ N EL + L E+D + Y VLL+N YA +W+ V++ M +
Sbjct: 485 LLAACRVYGNVELGEIAARHLF-EIDPTDSGNY-VLLANTYASNDKWECAEEVKKLMSKK 542
Query: 491 GVKKPPGQSWIQ 502
G+KKP G SWIQ
Sbjct: 543 GMKKPSGYSWIQ 554
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 265/529 (50%), Gaps = 52/529 (9%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPSTTVWNHI 85
N+ +Q+H+Q + SQ +KL +F S L +A L +T + ++ +N I
Sbjct: 5 NMSQALQLHAQFIK---SQNQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTI 61
Query: 86 IRGYARSHTP---WKSVECYRQMVSTEA---EPNGFTYSFLLSACVRGGLLREGEQVHGI 139
IR Y+ + P ++++ + M+ +P+ FTYSF L +C R L ++ +Q+HG
Sbjct: 62 IRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGF 121
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
+ G+ +++++ LI+ Y+ G+ A
Sbjct: 122 INKMGFGFDLYIQNALIHMYS-------------------------------EIGELVIA 150
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
R+VFD M R+VVSWT+MIAG +A+ LF M V+
Sbjct: 151 RQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADS 210
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
G L +GR +H V+++ + + ALIHMY+ CG + A +VF + R
Sbjct: 211 GALSVGRKVHGIVKEKGI-----DFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFV 265
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
WT+MI A G+ KEA+ LF M + V+PD T++VVL A +AG V EG
Sbjct: 266 WTAMIYGLACHGMCKEAIELFLEMETCN-----VKPDERTIMVVLSAYRNAGLVREGYMF 320
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F + + + + P I+H+GCMVDLL++ G L+EA I MP+KP+ +W L+ C++H
Sbjct: 321 FNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHA 380
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
++E A + L + + +G +L SN+YA +W D VR+ M + G+ KPPG S
Sbjct: 381 DTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSS 440
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
I+++GVVH+FV GD H + I+ L +++ + + Y P ++ L
Sbjct: 441 RIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKVSEVML 489
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 127/329 (38%), Gaps = 39/329 (11%)
Query: 23 LQSCNNI---QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L+SC + Q Q+H + G I L+ Y +L A ++F + +
Sbjct: 103 LKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDV 162
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
W +I G+ H ++++ +++M+ + N T +L C G L G +VHGI
Sbjct: 163 VSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGI 222
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V KG V T LI+ Y+ G +E AR VFD + R V W
Sbjct: 223 VKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVW---------------- 266
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
T MI G A G CK+A+ LF EM V+
Sbjct: 267 ---------------TAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNA 311
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STV 318
G ++ G VQ+R +P+++ ++ + A G + +A MP + V
Sbjct: 312 GLVREGYMFFNDVQKRY----SMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAV 367
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
W ++I A + A L K + G
Sbjct: 368 IWRTLIWACKVHADTERAERLMKHLELQG 396
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 259/524 (49%), Gaps = 48/524 (9%)
Query: 16 QQHVFTLLQ---SCNNIQN---LIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
+H F LL S N + N +++QV G + +S + S +++A K
Sbjct: 103 DKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACK 162
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F W +I G+ ++ P +++ C+ +M +GFT + +L A G
Sbjct: 163 VFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGD 222
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G++VHG FY VE R V DG SV + +++
Sbjct: 223 YCFGKRVHG-------------------FY-----VETGRVVLDG----SV--YCALVDM 252
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y CG + A +VFDEMP R+VV+WT ++AG Q + + ALS F M V
Sbjct: 253 YFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTL 312
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L GR +H Y++ N + L +L+ MYA CG + A VF
Sbjct: 313 TSVLSACAHVGALDQGRLVHRYMEH-----NDCNLNAVLGTSLVDMYAKCGCVDKALMVF 367
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+ ++ +WT+MI A G AL +F M+ G +RP+ +T + VL AC H
Sbjct: 368 ENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESG-----LRPNDVTFLGVLGACSH 422
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
GFVDEG+++F M T+ + P +EHYGCMVDLL RAG L++A +I+NMP+KP+ + G
Sbjct: 423 GGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLG 482
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
ALLG C HK+ + + LV L + GY LL+N+Y+ + W+ V VR+ M
Sbjct: 483 ALLGACVSHKDFVMGEHIGNILV-NLQQNHNTGY-ALLANLYSTCQNWEAVARVRKLMKG 540
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
V+K PG SWI++ G +H+F A D +H +Y +L +I Q
Sbjct: 541 TQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQ 584
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 259/524 (49%), Gaps = 48/524 (9%)
Query: 16 QQHVFTLLQ---SCNNIQN---LIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHK 69
+H F LL S N + N +++QV G + +S + S +++A K
Sbjct: 103 DKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACK 162
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+F W +I G+ ++ P +++ C+ +M +GFT + +L A G
Sbjct: 163 VFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGD 222
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G++VHG FY VE R V DG SV + +++
Sbjct: 223 YCFGKRVHG-------------------FY-----VETGRVVLDG----SV--YCALVDM 252
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y CG + A +VFDEMP R+VV+WT ++AG Q + + ALS F M V
Sbjct: 253 YFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTL 312
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G L GR +H Y++ N + L +L+ MYA CG + A VF
Sbjct: 313 TSVLSACAHVGALDQGRLVHRYMEH-----NDCNLNAVLGTSLVDMYAKCGCVDKALMVF 367
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+ ++ +WT+MI A G AL +F M+ G +RP+ +T + VL AC H
Sbjct: 368 ENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESG-----LRPNDVTFLGVLGACSH 422
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
GFVDEG+++F M T+ + P +EHYGCMVDLL RAG L++A +I+NMP+KP+ + G
Sbjct: 423 GGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVLG 482
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
ALLG C HK+ + + LV L + GY LL+N+Y+ + W+ V VR+ M
Sbjct: 483 ALLGACVSHKDFVMGEHIGNILV-NLQQNHNTGY-ALLANLYSTCQNWEAVARVRKLMKG 540
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
V+K PG SWI++ G +H+F A D +H +Y +L +I Q
Sbjct: 541 TQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQ 584
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/515 (31%), Positives = 255/515 (49%), Gaps = 47/515 (9%)
Query: 28 NIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNH 84
NI NL +H V S++ LL Y L A ++F + + + W
Sbjct: 583 NIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTS 642
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG 144
I Y R ++ + +M S P+ +T + ++ AC L +G VH V+ G
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 702
Query: 145 YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
SN+ V LIN YA CG + AR VF
Sbjct: 703 MGSNLPVTNALINMYA-------------------------------KCGSVEEARLVFS 731
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL 264
++P++++VSW TMI G +Q +AL LF +M++ + + L
Sbjct: 732 KIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAALDK 790
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMI 324
GR IH ++ +R + + + AL+ MYA CG++ A +F +P++ +SWT MI
Sbjct: 791 GREIHGHILRRGYFSD-----LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMI 845
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
+ G G EA+ F M + G+ PD + V+L AC H+G ++EG + F SM
Sbjct: 846 AGYGMHGFGNEAISTFNEM-----RIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMR 900
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
G+ P++EHY C+VDLL+R G L +A+ IE+MP+KP+ +WG LL GC+IH + +LA
Sbjct: 901 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLA 960
Query: 445 SVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQIN 504
V + EL+ D Y V+L+N+YA A++W++V +R++M + G K+ PG SWI++
Sbjct: 961 EKVAEHIF-ELEPDNTR-YYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVG 1018
Query: 505 GVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
G + FVAG+ H + I +L ++ Q + Y
Sbjct: 1019 GKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDY 1053
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 196/417 (47%), Gaps = 46/417 (11%)
Query: 21 TLLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++LQ C ++++ ++HS ++ NG+S + KL+ Y+ L K+F I N
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+WN ++ YA+ +SV +++M N +T++ +L G ++E ++VH
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G VL G+ SN V NS++A Y G +
Sbjct: 494 GYVLKLGFGSNTAV-------------------------------VNSLIAAYFKFGGVE 522
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +FDE+ +VVSW +MI GC G L +F +M VE
Sbjct: 523 SAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWA 582
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+L LGR +H + + + V +N L+ MY+ CG + A +VF KM +
Sbjct: 583 NIGNLSLGRALHGFGVKACFSE-----EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTI 637
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
VSWTS I A+ ++GL +A+GLF M S GVRPD T+ ++ AC + +D+GR
Sbjct: 638 VSWTSTIAAYVREGLYSDAIGLFDEMQS-----KGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + + + G+ + ++++ ++ G ++EA + +P+K + W ++GG
Sbjct: 693 DVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 200/459 (43%), Gaps = 59/459 (12%)
Query: 18 HVFTLLQSC----NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
+ FT + C ++ ++H V+ G T ++ L++ Y ++ AH LF
Sbjct: 471 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 530
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ P WN +I G + +E + QM+ E + T +L A G L G
Sbjct: 531 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+HG + + V L++ Y+ G + A VF MG ++VSW S +A YV
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 194 GDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
G + A +FDEM + ++ + T+++ CA C +L
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA----CSSSLD----------------- 689
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
GR +H Y V +N ++ + NALI+MYA CG + +A VF
Sbjct: 690 --------------KGRDVHSY-----VIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+K+P + VSW +MI +++ L EAL LF M +PD IT+ VL AC
Sbjct: 731 SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ------FKPDDITMACVLPACAG 784
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGC-MVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
+D+GR I + R S H C +VD+ ++ G L A L + +P K + W
Sbjct: 785 LAALDKGREIHGHILRRGYFSDL--HVACALVDMYAKCGLLVLAQLLFDMIP-KKDLISW 841
Query: 429 GALLGGCQIHK-NSELASVVEPKLVAELDTDGAAGYLVL 466
++ G +H +E S +A ++ D ++ ++L
Sbjct: 842 TVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL 880
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 118/304 (38%), Gaps = 42/304 (13%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
+Y +L C L +G++VH +++ G + + L+ Y G + Q R +FD +
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
V WN +++ Y G+F ++++SLF
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNF-------------------------------RESVSLFK 459
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+M++ V G +K + +H YV + N + N+LI
Sbjct: 460 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTA-----VVNSLIAA 514
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y G + A+ +F ++ + VSW SMI G L +F M+ + GV
Sbjct: 515 YFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML-----ILGVEV 569
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D TL+ VL A + G + GR + S + ++D+ S+ G L+ A +
Sbjct: 570 DLTTLVSVLVAWANIGNLSLGRALHG-FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 628
Query: 416 IENM 419
M
Sbjct: 629 FVKM 632
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 188/602 (31%), Positives = 283/602 (47%), Gaps = 93/602 (15%)
Query: 8 PASGRRSIQQHVF--TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
P + H F +L+ + +I +L Q+H+Q+VL+GL ++TKL++ Q+
Sbjct: 37 PHEFDHCFKSHSFYASLIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIF 96
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+A KLF +P +WN IIR Y+R++ +E YR M P+ FT+ +L AC
Sbjct: 97 YARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKAC- 155
Query: 126 RGGLLREGEQ--VHGIVLVKGYCSNVFVE------------------------------- 152
LL G VH V+V G+ S+VFV+
Sbjct: 156 -SELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSW 214
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSV-VSWNSIL------------------------ 187
T +++ Y G +A +FD M + V W S++
Sbjct: 215 TAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIK 274
Query: 188 --------------AGYVSCGDFDGARRVFDEMPIRN-VVSWTTMIAGCAQKGRCKQALS 232
A Y CG+ A+ FD+M N V+ W MI+G A+ G ++A+
Sbjct: 275 MGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVE 334
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
LF M ++ G LKL +W+ YV+ +++ + +N L
Sbjct: 335 LFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVR-----KSKYGGDIFVNTTL 389
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I MYA CG + A VF + + V W++MIM + G G EA+ L+ M +G
Sbjct: 390 IDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEG----- 444
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
V P+ +T I +L AC H+G + +G +F M R +GI PR EHY C+VDLL RAG+L +A
Sbjct: 445 VCPNDVTFIGLLTACSHSGLIKQGWELFHCM-RDFGIKPRNEHYSCVVDLLGRAGYLKQA 503
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
+ I MP++P ++WGALL C+IH+ L KL + LD G+ V LSN+YA
Sbjct: 504 YVFILKMPIEPGVSVWGALLSACKIHRCVTLGEYAAQKLFS-LDPYN-TGHYVQLSNLYA 561
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
++ W V +R M E G+ K G S I IN +H F AGDM+H + EI E+ +
Sbjct: 562 SSRMWDRVAYIRVLMKEKGLTKYLGYSVIDINEKLHTFHAGDMSHPQA---KEIFYELQR 618
Query: 533 QS 534
Q
Sbjct: 619 QE 620
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 268/552 (48%), Gaps = 84/552 (15%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKT------NIITKLLSFYIASDQLQHAHKLFSTID 75
L + NI +L QIH+ + L L Q ++ ++L F L +AHKLF T+
Sbjct: 16 FLNNAKNISHLKQIHA-LFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLFDTMP 74
Query: 76 NPSTT-VWNHIIRGYARSHTPWK-SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
N S +W +IR + HT ++ + + M P+GFT+S +L+AC R + EG
Sbjct: 75 NCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEG 134
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM------------------ 175
+QVH ++ G+ N V+T L++ YA G V AR VFDGM
Sbjct: 135 KQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKA 194
Query: 176 -------------GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
G+R+ +W +++AGY + GD A ++D M + V+W MIAG
Sbjct: 195 GRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYG 254
Query: 221 -----------------------------C-AQKGRCKQALSLFGEMRRARVEXXXXXXX 250
C AQ G ++A+ ++ +MRRA+++
Sbjct: 255 KLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMV 314
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
D+++ + + +++ + ++NALIHM + CG I A++ F
Sbjct: 315 GAISACAQLRDIRMSNLLTYDIEEGFCEKTHI-----VSNALIHMQSKCGNIDLAWREFN 369
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
M R ++++MI AFA+ G ++A+ LF M +G + P+ +T + VL AC +
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEG-----LTPNQVTFVGVLNACSTS 424
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G ++EG R F M +GI P EHY CMVDLL RAG L++A+ LI+ + WG+
Sbjct: 425 GLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGS 484
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LL C+++ N EL + L E+D + Y VLL+N YA +W+ V++ M +
Sbjct: 485 LLAACRVYGNVELGEIAARHLF-EIDPTDSGNY-VLLANTYASNDKWERAEEVKKLMSKK 542
Query: 491 GVKKPPGQSWIQ 502
G+KKP G SWIQ
Sbjct: 543 GMKKPSGYSWIQ 554
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 257/529 (48%), Gaps = 46/529 (8%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L +C+ I+ IQ+H V GL + +L Y L A +F ++
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDA 438
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN II + ++ +++ + M+ + EP+ +T+ ++ AC L G +VHG
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+ G + FV + +I+ Y CG A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYC-------------------------------KCGMLVEA 527
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
++ + + R VSW ++I+G + + + + ALS F M + V
Sbjct: 528 EKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANL 587
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
++LG+ IH + + Q V + + ++ MY+ CG + D+ +F K P+R V+
Sbjct: 588 ATVELGKQIHGQI-----LKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVT 642
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W++MI A+A GLG++A+ LF+ M + V+P+ I VL AC H GFVD+G
Sbjct: 643 WSAMICAYAYHGLGEDAIKLFEEM-----QLQNVKPNHTIFISVLRACAHMGFVDKGLHY 697
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F M +G+ P++EHY CMVDLL R+G ++EA LIE+MP + +D +W LLG C++
Sbjct: 698 FREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG 757
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
N E+A L+ +LD ++ Y VLLSN+YA A W +V +R M +KK PG S
Sbjct: 758 NVEVAEKAANSLL-QLDPQDSSAY-VLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCS 815
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
WIQ+ VH F+ GD H S IY+ ++ + D Y P+I G L
Sbjct: 816 WIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLL 864
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T+S + C + G+Q H + V G+ VFV L+ FY + A +VFD
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
M QR V+SWN+++ GY G+ + A+ +FD MP R+VVSW +M++ Q G ++++ +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+MR ++ D LG +H Q + V AL+
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD-----VVTGTALVD 213
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
MY++C + A+ +F +MP+R++V W+++I + + E L L+K M+ +G GV
Sbjct: 214 MYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV 269
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 57/412 (13%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ + + T L Y D++ A K+F+T NP+ N +I GYAR
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD 351
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSAC--VRGGLLREGEQVHGIVLVKGYCSNVFV 151
+++E +R + + + + + S L+AC ++G L EG Q+HG+ + G N+ V
Sbjct: 352 QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYL--EGIQLHGLAVKCGLDFNICV 409
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+++ YA G + +A +FD M + VSWN+I+A + + +F M +R+
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSM-LRST 468
Query: 212 V-----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
+ ++ +++ CA K + + G + +K G
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRV------------------------IKSGM 504
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+ W+V +A+I MY CG++ +A ++ ++ +R+TVSW S+I
Sbjct: 505 GLDWFV----------------GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG 548
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
F+ + G+ AL F M+ GV PD T VL C + V+ G++I + +
Sbjct: 549 FSSEKQGENALSYFSRMLQ-----VGVIPDNFTYATVLDICANLATVELGKQIHGQILKL 603
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ + +VD+ S+ G + ++ + E P K + W A++ H
Sbjct: 604 -QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYH 653
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 193/477 (40%), Gaps = 93/477 (19%)
Query: 18 HVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
H+F Q C+N++ + Q H+Q+ + G + LL FY L +A +F +
Sbjct: 43 HIF---QKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 75 DNPSTTVWNHIIRGYA-----------------RSHTPW--------------KSVECYR 103
WN +I GYA R W KS+E +
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+M E + + T++ +L AC G QVH + + G+ S+V T L++ Y+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-VSWTTMIAGCA 222
++ A ++F M +R+ V W++++AGYV F +++ M + VS T A
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF----A 275
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
R LS F +LG +H Y + +
Sbjct: 276 SAFRSCAGLSAF----------------------------ELGTQLHAYALKTNFGYDN- 306
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
+ A + MYA C + DA +VF P + S ++I+ +A+Q EAL +F++
Sbjct: 307 ----IVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRS 362
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
+ D I+L L AC EG ++ + G+ I ++D+
Sbjct: 363 LQKSYLDF-----DEISLSGALTACSAIKGYLEGIQLHG-LAVKCGLDFNICVANTILDM 416
Query: 403 LSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSE---------LASVVEP 449
++ G L EA + ++M +K DA+ W A++ + +++ E L S +EP
Sbjct: 417 YAKCGALMEACLIFDDMEIK--DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEP 471
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 257/529 (48%), Gaps = 46/529 (8%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L +C+ I+ IQ+H V GL + +L Y L A +F ++
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDA 438
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
WN II + ++ +++ + M+ + EP+ +T+ ++ AC L G +VHG
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+ G + FV + +I+ Y CG A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYC-------------------------------KCGMLVEA 527
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
++ + + R VSW ++I+G + + + + ALS F M + V
Sbjct: 528 EKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANL 587
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
++LG+ IH + + Q V + + ++ MY+ CG + D+ +F K P+R V+
Sbjct: 588 ATVELGKQIHGQI-----LKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVT 642
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W++MI A+A GLG++A+ LF+ M + V+P+ I VL AC H GFVD+G
Sbjct: 643 WSAMICAYAYHGLGEDAIKLFEEM-----QLQNVKPNHTIFISVLRACAHMGFVDKGLHY 697
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F M +G+ P++EHY CMVDLL R+G ++EA LIE+MP + +D +W LLG C++
Sbjct: 698 FREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQG 757
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
N E+A L+ +LD ++ Y VLLSN+YA A W +V +R M +KK PG S
Sbjct: 758 NVEVAEKAANSLL-QLDPQDSSAY-VLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCS 815
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
WIQ+ VH F+ GD H S IY+ ++ + D Y P+I G L
Sbjct: 816 WIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLL 864
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 5/236 (2%)
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T+S + C + G+Q H + V G+ VFV L+ FY + A +VFD
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
M QR V+SWN+++ GY G+ + A+ +FD MP R+VVSW +M++ Q G ++++ +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
+MR ++ D LG +H Q + V AL+
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD-----VVTGTALVD 213
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
MY++C + A+ +F +MP+R++V W+++I + + E L L+K M+ +G GV
Sbjct: 214 MYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV 269
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 185/412 (44%), Gaps = 57/412 (13%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ + + T L Y D++ A K+F+T NP+ N +I GYAR
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD 351
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSAC--VRGGLLREGEQVHGIVLVKGYCSNVFV 151
+++E +R + + + + + S L+AC ++G L EG Q+HG+ + G N+ V
Sbjct: 352 QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYL--EGIQLHGLAVKCGLDFNICV 409
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+++ YA G + +A +FD M + VSWN+I+A + + +F M +R+
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSM-LRST 468
Query: 212 V-----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
+ ++ +++ CA K + + G + +K G
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRV------------------------IKSGM 504
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+ W+V +A+I MY CG++ +A ++ ++ +R+TVSW S+I
Sbjct: 505 GLDWFV----------------GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG 548
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
F+ + G+ AL F M+ GV PD T VL C + V+ G++I + +
Sbjct: 549 FSSEKQGENALSYFSRMLQ-----VGVIPDNFTYATVLDICANLATVELGKQIHGQILKL 603
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ + +VD+ S+ G + ++ + E P K + W A++ H
Sbjct: 604 -QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYH 653
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 193/477 (40%), Gaps = 93/477 (19%)
Query: 18 HVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
H+F Q C+N++ + Q H+Q+ + G + LL FY L +A +F +
Sbjct: 43 HIF---QKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 75 DNPSTTVWNHIIRGYA-----------------RSHTPW--------------KSVECYR 103
WN +I GYA R W KS+E +
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+M E + + T++ +L AC G QVH + + G+ S+V T L++ Y+
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-VSWTTMIAGCA 222
++ A ++F M +R+ V W++++AGYV F +++ M + VS T A
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATF----A 275
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
R LS F +LG +H Y + +
Sbjct: 276 SAFRSCAGLSAF----------------------------ELGTQLHAYALKTNFGYDN- 306
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
+ A + MYA C + DA +VF P + S ++I+ +A+Q EAL +F++
Sbjct: 307 ----IVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRS 362
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
+ D I+L L AC EG ++ + G+ I ++D+
Sbjct: 363 LQKSYLDF-----DEISLSGALTACSAIKGYLEGIQLHG-LAVKCGLDFNICVANTILDM 416
Query: 403 LSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSE---------LASVVEP 449
++ G L EA + ++M +K DA+ W A++ + +++ E L S +EP
Sbjct: 417 YAKCGALMEACLIFDDMEIK--DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEP 471
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 249/536 (46%), Gaps = 45/536 (8%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
G+++ + ++L + +++ L +H V G N+ T LL Y +++
Sbjct: 230 DGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVET 289
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
+F + + + WN +I G A++ ++ + +M + EP + L AC
Sbjct: 290 GRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSN 349
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
G L G+ VH ++ SNV V NS+
Sbjct: 350 LGDLERGKFVHRLLDQMKLSSNVSV-------------------------------MNSL 378
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
++ Y C D A VFD + + V+W MI G AQ G +AL+LF M+ ++
Sbjct: 379 ISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDS 438
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
+ +WIH + R +V + AL+ MYA CG I A
Sbjct: 439 FTFVSVITALADLSVTRQAKWIHG-----LAIRTNMDTNVFVATALVDMYAKCGAIETAR 493
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
++F M +R ++W +MI + GLGK AL LF M ++ + ++P+ IT + V+ A
Sbjct: 494 ELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEAS----LKPNDITFLSVISA 549
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C H+GFV+EG F M +G+ P ++HYG MVDLL RAG LD+A I MP+KP
Sbjct: 550 CSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEMPIKPGIT 609
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
+ GA+LG C+IHKN EL +L ELD D GY +L++N+YA A W V VR
Sbjct: 610 VLGAMLGACKIHKNIELGEKAADRLF-ELDPD-EGGYYMLVANMYASASMWDKVAKVRTA 667
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
M + G+ K PG S ++ VH F +G H S IY L + + Y PD
Sbjct: 668 MEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQSKRIYAFLETLGDEIRAAGYVPD 723
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 46/420 (10%)
Query: 22 LLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LLQ C +++ +++H ++ NG +T +++ Y ++ A+K+F +
Sbjct: 141 LLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERD 200
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN ++ GYA++ K+++ M + + T +L A LR G VHG
Sbjct: 201 LVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHG 260
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ G+ S V V T L++ Y G VE R VF M ++VVSWN
Sbjct: 261 YAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWN-------------- 306
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
T+I G AQ G ++A + F +M +VE
Sbjct: 307 -----------------TVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSN 349
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
GDL+ G+++H + Q ++ N V + N+LI MY+ C + A VF + ++ V
Sbjct: 350 LGDLERGKFVHRLLDQMKLSSN-----VSVMNSLISMYSKCKRVDIAASVFDNLEGKTNV 404
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI+ +A+ G EAL LF TM S G++PD+ T + V+ A + +
Sbjct: 405 TWNAMILGYAQNGCVNEALNLFCTMQS-----QGIKPDSFTFVSVITALADLSVTRQAKW 459
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
I RT + + +VD+ ++ G ++ A L + M + + W A++ G H
Sbjct: 460 IHGLAIRT-NMDTNVFVATALVDMYAKCGAIETARELFDMMQER-HVITWNAMIDGYGTH 517
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 198/433 (45%), Gaps = 48/433 (11%)
Query: 7 VPASGRRSIQQHVF-----TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
P R I H++ LL+ +I L QI ++ NG + TKL+S +
Sbjct: 23 TPLYQRIYIPTHIYRHPSSILLELTTSISELHQILPHIIKNGFYNQHLFQTKLISLFCKF 82
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
+ A ++F +++ +++ +++GY ++ + +S+ +++M + E EP + +++LL
Sbjct: 83 GTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLL 142
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
C L++G +VHG+++ G+ SN+F T+++N YA ++ A +F M +R +V
Sbjct: 143 QLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLV 202
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
WN+++AGY AQ G ++AL L +M+
Sbjct: 203 CWNTVVAGY-------------------------------AQNGFARKALKLVLDMQEDG 231
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ L++GR +H Y R V ++ AL+ MY CG
Sbjct: 232 KKADSITLVSVLPAVADVKGLRIGRSVHGY-----AVRLGFDSMVNVSTALLDMYFKCGE 286
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ VF +M ++ VSW ++I A+ G +EA F M + V P ++++
Sbjct: 287 VETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFE-----EKVEPTNVSMM 341
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
L AC + G ++ G+ + +++ +S + ++ + S+ +D A + +N+
Sbjct: 342 GALHACSNLGDLERGKFVHRLLDQM-KLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEG 400
Query: 422 KPNDALWGALLGG 434
K N W A++ G
Sbjct: 401 KTN-VTWNAMILG 412
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 258/506 (50%), Gaps = 16/506 (3%)
Query: 45 SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQ 104
++ T LLSFY A+KLF + + +N +I G R ++V+ +R+
Sbjct: 74 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 133
Query: 105 MVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGR 162
M + + FT L+S C ++ QVHG+ + G+ +N+ + LI+ Y
Sbjct: 134 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 193
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCA 222
G + +F M ++ VSW S++ Y D A +VF+EMP++ VSW +I+G
Sbjct: 194 GEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFV 253
Query: 223 QKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ 282
+ GRC +AL +F +M + V + G+ +H Q I R+
Sbjct: 254 KNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHC---QIIRGRSSD 310
Query: 283 QP-SVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGLGKEALGLF 340
+V + NAL+ MYA CG + A +F M + VSW ++I FA+ G G+++L +F
Sbjct: 311 NLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVF 370
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M+ + P+ +T + VL AC HAG V+ G + SM R +G+ P+ HY ++
Sbjct: 371 DRMIE-----SNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLI 425
Query: 401 DLLSRAGFLDEAHGLIENMPLKPND--ALWGALLGGCQIHKNSELASVVEPKLVAELDTD 458
DLL R L+EA LIE +P + ++ A+WGA+LGGC++H N ELA L A L+ +
Sbjct: 426 DLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFA-LEPE 484
Query: 459 GAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHK 518
Y V+LSNIYA + RW D +R M E G+KK P S I++ H+FVA D H
Sbjct: 485 NTGRY-VMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHP 543
Query: 519 HSYFIYEILSEIIKQSHVDSYEPDIT 544
I E S++++ Y+P I+
Sbjct: 544 QIGEIREANSKLVQHMMDVGYQPCIS 569
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 149/351 (42%), Gaps = 41/351 (11%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+S L+S CV L+ G+ +H ++ F+ LI+ Y+ G E FD +
Sbjct: 14 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 73
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
++ +WN++L+ Y G F+ A ++FDEMP RN+VS+ ++I+G + K+A+ F E
Sbjct: 74 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 133
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M+ V L +W+ + + ++ LNNALI Y
Sbjct: 134 MQNG-VGGLMLDEFTLVSLVSNCSCLDTVKWLRQV--HGVATIVGFRTNLILNNALIDAY 190
Query: 297 ASCGV-------------------------------IGDAYQVFTKMPQRSTVSWTSMIM 325
CG I DA +VF +MP + TVSW ++I
Sbjct: 191 GKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALIS 250
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
F K G EAL +F M+ +GV P A T + VL AC + G+++ + R
Sbjct: 251 GFVKNGRCYEALEVFHQMIK-----EGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR 305
Query: 386 TWGISPRIEHY--GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
Y ++D+ ++ G + A L E M + W L+ G
Sbjct: 306 GRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITG 356
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 278/585 (47%), Gaps = 60/585 (10%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT--KLLSFY 58
M ++ F P I + L C I + Q+ ++ K +I + LLS Y
Sbjct: 56 MELQLFQPTDS--FIHNQLLHLYAKCGKISDAQQLFDKM------SKRDIYSWNALLSAY 107
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
++ + +F + + +N +I +A + K++ + +M P ++Y
Sbjct: 108 AKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYV 167
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
L AC + R G+Q+HG V+V + NVFV + + YA G +++AR +FDGM +
Sbjct: 168 NALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNK 227
Query: 179 SVVSWNSILAGYVSCGD-----------------------------------FDGARRVF 203
++VSWN +++GYV G D AR +F
Sbjct: 228 NLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMF 287
Query: 204 DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
D++ ++ + WTTMI G AQ GR + AL LF EM R V L
Sbjct: 288 DKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLY 347
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSM 323
G+ +H V V N + +++AL+ MY CGV DA +F MP ++ + W SM
Sbjct: 348 HGQAVHGKVILMGVDSN-----MLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSM 402
Query: 324 IMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM 383
I+ +A+ G +EAL L++ M+ + +PD I+ + VL AC + V EGR+ F S+
Sbjct: 403 ILGYAQNGEAEEALTLYERMLQEN-----FKPDNISFVGVLSACINTNMVKEGRKHFDSI 457
Query: 384 NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSEL 443
+ G++P ++HY CM+ LL R+G +D+A LI+ MP KP+ +W ALL C K
Sbjct: 458 SEQ-GMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSVCS--KGDIK 514
Query: 444 ASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
+ V + +LD A Y ++LSN+YA RW+DV VR M KK SW++I
Sbjct: 515 TAEVAANHIFQLDPHNAGSY-IMLSNLYAACGRWKDVAVVRSLMKSKNAKKFSAYSWVEI 573
Query: 504 NGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
VH FV+ D H IY L+ +I Y PD TG L
Sbjct: 574 GKKVHRFVSDDHNHPEMEKIYSELNRLIGILQQIGYNPD-TGIVL 617
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/536 (33%), Positives = 262/536 (48%), Gaps = 64/536 (11%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFS----TI 74
+LL ++I L Q+ + + +GL + TKL+ F S L HA+ LF I
Sbjct: 11 SLLNKLSSISELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILI 70
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG-GLLRE- 132
NP + N +IR ++ S P +++ Y QM+ + +T +F+L AC R L++E
Sbjct: 71 HNPFIS--NTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQES 128
Query: 133 --------------GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG---- 174
G ++H V+ G+ ++ V+ +L+ FY+ G V ARH+FD
Sbjct: 129 GSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDT 188
Query: 175 ---------------------------MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
M ++VVSWN+++A Y+ GD ARRVF MP
Sbjct: 189 SLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMP 248
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
RN VSW +MIAGC AL LF EM+ A V+ G L++G
Sbjct: 249 ERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHK 308
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
I Y ++ + + L NAL++MY CG + A+++F M ++ W +M++
Sbjct: 309 I--YESLKVC---EHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGL 363
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
A G +E LF M G +RPD +T I VL AC H G VD+ R F M + +
Sbjct: 364 AVHGYCEEVFQLFTEMEESLGG--SIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRY 421
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
I P +HYGCMVDLLSR G L+EA+ +I P + + LW LLG C+ N+ELA +
Sbjct: 422 KIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAE-I 480
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
K +A+L Y VLLSNIYA A RW +V +R +M + V + G S I +
Sbjct: 481 SFKQLAKLKQLIDGDY-VLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 535
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 156/398 (39%), Gaps = 64/398 (16%)
Query: 6 FVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNII-----------TKL 54
F G S+ +H+F ++ + + I I + ++N ++ L
Sbjct: 168 FYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTL 227
Query: 55 LSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNG 114
++ YI +Q A ++F + + WN +I G ++E + +M + +P
Sbjct: 228 IARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTE 287
Query: 115 FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T +L AC G L G +++ + V + ++ L+N Y G + A +F+G
Sbjct: 288 VTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNG 347
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEM------PIR-NVVSWTTMIAGCAQKGRC 227
M ++V WN+++ G G + ++F EM IR + V++ ++ C+ KG
Sbjct: 348 MKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLV 407
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+A WY +V R + P +
Sbjct: 408 DKA--------------------------------------RWYFDH-MVKRYKIVPDSK 428
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
++ + + G++ +AYQ+ P Q S V W +++ A Q + A FK +
Sbjct: 429 HYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKL 488
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
+DG D + L + AG DE R+ + M+
Sbjct: 489 KQLIDG---DYVLLSNIY---AEAGRWDEVERLRSEMD 520
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 256/554 (46%), Gaps = 75/554 (13%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H V +GL + + L+ Y +++ A+K+F + WN ++ GY+++
Sbjct: 136 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 195
Query: 94 ---------------------TPWKSV--------------ECYRQMVSTEAEPNGFTYS 118
W SV + +RQM PN T
Sbjct: 196 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 255
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNV-FVETNLINFYAGRGGVEQARHVFDGMGQ 177
LLSAC G L G++ H C +V F+ N D
Sbjct: 256 SLLSACASVGALLHGKETH--------CYSVKFILKGEHN---------------DDTDD 292
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEM--PIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
+V+ N+++ Y C + AR +FDE+ R+VV+WT MI G AQ G AL LF
Sbjct: 293 LAVI--NALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFS 350
Query: 236 EMRRAR--VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
EM + + L G+ IH YV +R + + + + N LI
Sbjct: 351 EMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSD---VLFVANCLI 407
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY+ G + A VF M +R+ VSWTS++ + G ++A +F M + +
Sbjct: 408 DMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEA-----L 462
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
PD IT +VVL AC H+G VD G +F M++ +G+ P +EHY CMVDLL RAG L EA
Sbjct: 463 VPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEAT 522
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
LI +M ++P +W +LL C+ H N ELA KL+ EL D Y LLSNIYA
Sbjct: 523 RLINDMSMEPTPVVWISLLSACRTHSNIELAEFAAKKLL-ELKADNDGTY-TLLSNIYAN 580
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
A+RW+DV +R M G+KK PG SW+Q + F GD TH S IYE L+++I++
Sbjct: 581 ARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSLKIYETLADLIQR 640
Query: 534 SHVDSYEPDITGAF 547
Y P A
Sbjct: 641 IKAIGYVPQTNFAL 654
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 213/463 (46%), Gaps = 22/463 (4%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI---D 75
+ ++C I N IH V+ G + ++S Y + HA K+F +
Sbjct: 16 VFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRG 75
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+ WN I+ Y+ P +V +R+M V P+ +L C GL G
Sbjct: 76 ICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGR 135
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVHG + G +VFV L++ YA G +E A VF+ M + VV+WN+++ GY G
Sbjct: 136 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 195
Query: 195 DFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
F+ A +F +M +VV+W+++I+G AQ+G +A+ +F +M R
Sbjct: 196 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 255
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVA--RNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L G+ H Y + I+ N + + NALI MYA C + A +
Sbjct: 256 SLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAM 315
Query: 309 FTKM--PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG-VRPDAITLIVVLC 365
F ++ R V+WT MI +A+ G AL LF M +D + P+ T+ VL
Sbjct: 316 FDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFK----IDNCIVPNDFTISCVLM 371
Query: 366 ACCHAGFVDEGRRIFAS-MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
+C ++ G++I A + R+ S + C++D+ S++G +D A + ++M K N
Sbjct: 372 SCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRN 430
Query: 425 DALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLL 467
W +LL G +H SE A V ++ E +LV+L
Sbjct: 431 AVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVL 473
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 149/378 (39%), Gaps = 85/378 (22%)
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
P+ +T+ F+ AC G +HG V+ G+ SNVFV +I+ Y V AR V
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 172 FDGMGQRSV---VSWNSILAGYVSCGDFDGARRVFDEMPI-----RNVVSWTTMIAGCAQ 223
FD + R + V+WNSI++ Y C + A +F EM + + V ++ C
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 127
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ 283
G L L GR +H + R+
Sbjct: 128 LG-----LGL------------------------------CGRQVHGF-----CVRSGLV 147
Query: 284 PSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
V + NAL+ MYA CG + DA +VF +M + V+W +M+ +++ G ++AL LF M
Sbjct: 148 EDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 207
Query: 344 VSDGAGVDGV------------------------------RPDAITLIVVLCACCHAGFV 373
+ D V RP+ +TL+ +L AC G +
Sbjct: 208 REEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 267
Query: 374 DEGRRI------FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
G+ F + + ++D+ ++ L+ A + + + K D +
Sbjct: 268 LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVV 327
Query: 428 -WGALLGGCQIHKNSELA 444
W ++GG H ++ A
Sbjct: 328 TWTVMIGGYAQHGDANHA 345
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 166/603 (27%), Positives = 275/603 (45%), Gaps = 92/603 (15%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN-- 76
+LQ+C ++ L Q+H + GL T + ++S Y + + + A +F ++++
Sbjct: 261 MLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHS 320
Query: 77 ------------------------------------PSTTVWNHIIRGYARSHTPWKSVE 100
P WN I+ GY + +
Sbjct: 321 RNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLT 380
Query: 101 CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
+R + S +P+ + + L A + G + G+++HG ++ +V+V T+L++ Y
Sbjct: 381 SFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYV 440
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP------------- 207
+E+A+ V ++V +WNS+++GY G F A ++ ++M
Sbjct: 441 KNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNG 500
Query: 208 --------------------------IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
NVVSWT +I+GC+Q + AL +F +M+
Sbjct: 501 LVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAEN 560
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V+ LK G +H + + + + + ALI MY+ G
Sbjct: 561 VKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDD-----IYVATALIDMYSEAGK 615
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ AY VF K+ +++ W M+M +A G+E + L+ M +RPDAIT
Sbjct: 616 LKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERH-----IRPDAITFT 670
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+L AC ++G VDEG + F SM + I P IEHY CMVDLL ++GFLDEA IE MP+
Sbjct: 671 ALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPI 730
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
KP+ ++WGALL C+IHKN +LA + KL +++ + +A Y VL+ N+Y+ RW V
Sbjct: 731 KPDASIWGALLASCKIHKNIKLAEIAARKLF-KMEPNNSANY-VLMMNLYSSLNRWVAVE 788
Query: 482 AVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
++ M + +K PP SW Q+N +H F H IY L ++I + Y P
Sbjct: 789 RLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAP 848
Query: 542 DIT 544
D+
Sbjct: 849 DLN 851
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 179/413 (43%), Gaps = 21/413 (5%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+++H+ ++ G ++ L++FY + A+++F +WN I+ RS
Sbjct: 174 LEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRS 233
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++E + M A+ T +L AC + L EG+Q+HG L G SN V
Sbjct: 234 ERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVC 293
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQ--RSVVSWNSILAGYVSCG----DFDGARRVFDEM 206
++I+ Y+ + AR VFD M R++ SWNS++ Y G D R +
Sbjct: 294 NSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECS 353
Query: 207 PIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
I+ ++++W ++++G +G + L+ F + + G KLG
Sbjct: 354 GIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLG 413
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+ IH Y+ R+ V + +L+ MY + A V + ++ +W S+I
Sbjct: 414 KEIHGYIM-----RSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLIS 468
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
++ +G EA+ L MV +G+ PD +T ++ G +DE I + +
Sbjct: 469 GYSFKGQFGEAVKLLNQMVE-----EGITPDLVTWNGLVSGYSMQGRIDEALTIINRI-K 522
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGC 435
+ GI+P + + ++ S+ +A + M +KPN +LL C
Sbjct: 523 SSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCAC 575
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 191/499 (38%), Gaps = 61/499 (12%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT---KLLSFYIASDQLQHAHKLFSTI 74
H F L + +++++H+Q++ + N T ++ Y+ A K+F
Sbjct: 56 HTFHELNELRTLNSVMELHAQII--KTPKNYNFATIDGTMMRNYLEFGDFLSAIKIFFVG 113
Query: 75 DNPSTTVWNHIIRGY-ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ +WN + + + P++ + + +M S E + ++F+L C+ G
Sbjct: 114 FARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICLALREFLFG 173
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+VH ++ KG+ +V + LINFY +++A V
Sbjct: 174 LEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQV---------------------- 211
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
F E P + W T++ + R K AL LF +M+R +
Sbjct: 212 ---------FHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKML 262
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
L G+ +H Y + + N + N++I MY+ A VF M
Sbjct: 263 QACGKLKALNEGKQLHGYALRFGLVSN-----TLVCNSIISMYSRNSRFKLARAVFDSME 317
Query: 314 Q--RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
R+ SW S+I ++A G +AL + +G G++PD IT +L G
Sbjct: 318 DHSRNLSSWNSVIFSYAVDGCLNDALD----TIRNGMECSGIKPDIITWNSILSGYLLRG 373
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL---DEAHGLIENMPLKPNDALW 428
+ F S++ + G P + + GF E HG I L + +
Sbjct: 374 SFEMVLTSFRSLH-SLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVC 432
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
+L+ + E A V + + L+S Y+F ++ + + + +M+
Sbjct: 433 TSLVDMYVKNDCLEKAQAV----LHRAKNKNVCAWNSLISG-YSFKGQFGEAVKLLNQMV 487
Query: 489 EMGVKKPPGQSWIQINGVV 507
E G+ P +W NG+V
Sbjct: 488 EEGI-TPDLVTW---NGLV 502
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 181/568 (31%), Positives = 267/568 (47%), Gaps = 94/568 (16%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNII--TKLLSFYIAS---DQLQHAHKLFST 73
+ +LL C + H+ ++ + T II +KL+ F + S + +A+ LF
Sbjct: 7 ILSLLPKCKTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQ 66
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
I +P+ ++N +I+GYA+S+ P S+ Y+QM+ P+ FT+ F+L AC G
Sbjct: 67 IHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSG 126
Query: 134 EQVHGIVLVKGYCSNVFVE-------------------------------TNLINFYAGR 162
+ VH +L G+ +NV+V T LIN Y
Sbjct: 127 KCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVIN 186
Query: 163 GGVEQARHVFDGMGQ--------------------------------------------- 177
+A VF MG+
Sbjct: 187 DQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFAS 246
Query: 178 -RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+V+ +I+ Y CG + AR +F++MP RN+V+W MI Q R +AL LF
Sbjct: 247 NSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFY 306
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M L LG +H Y+ + +A++ + L AL+ MY
Sbjct: 307 MLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKD-----IALATALLDMY 361
Query: 297 ASCGVIGDAYQVFTK-MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
A G +G A ++F + ++ V WTSMI A A G G EAL LF+ M D + V P
Sbjct: 362 AKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLV----P 417
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D IT I VL AC H G V+E ++ F M +++GI P EHY CMVDLLSRAG EA L
Sbjct: 418 DHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKL 477
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
+E M ++PN A+WGALL GCQIH+N +AS V+ +L AEL+ +G LLSNIYA +
Sbjct: 478 METMSIRPNIAIWGALLNGCQIHENIPVASQVKVRL-AELEPI-QSGIYALLSNIYANSG 535
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
+W++V R+ M + K G S +++
Sbjct: 536 KWEEVNRTRKMMKHKRIAKTIGHSSVEM 563
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 252/502 (50%), Gaps = 28/502 (5%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGL--SQKTNIITKLLSFYIA-------------SDQ 63
+ L++ C +I+ L QIH+ + + L +I+ LLS + + S
Sbjct: 3 MLNLIKQCKSIKQLHQIHALTITSNLLPHHPLSILNILLSTFTSLLNSKNNIKTYSNSFL 62
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA 123
+A LF++I NP+T +N +IR + +P +++ + + + T+ +L A
Sbjct: 63 TTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLILKA 122
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+ L + +H V G+ + FV +LI Y+ V A VF G R +VS+
Sbjct: 123 SSQLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSY 182
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N ++ G+V D AR +FDEMP RN V+W TMIAG +Q C++A+ LF EM
Sbjct: 183 NVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFI 242
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G+L+ GR++H Y+ RN + L L+ +YA CG +
Sbjct: 243 PDNIALVSVLSACAQLGELEQGRFVHDYI-----TRNGIRVDSYLTTGLVDLYAKCGCVE 297
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
A + F + +W +M++ FA G G L F MV +G ++PD +T + V
Sbjct: 298 IARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEG-----IKPDGVTFLGV 352
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L C HAG V E R++F M +G++ +HYGCM D+L+RAG ++E+ LI+ MP
Sbjct: 353 LVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGG 412
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
+ WG LLGGC+IH N E+A +++ DG G +++NIYA ++W D++ +
Sbjct: 413 DVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIKPEDG--GVYSVMANIYANTEQWDDLVKI 470
Query: 484 RQKM-IEMGVKKPPGQSWIQIN 504
R+ + KK G S I++N
Sbjct: 471 RKSLGANRRAKKITGTSLIRLN 492
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 262/541 (48%), Gaps = 50/541 (9%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI 59
I R+V +G V +L+SC + I + QIH+ V L + + Y
Sbjct: 96 IYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYS 155
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
A K+F + W +I GY ++ +V + +M + PN T+
Sbjct: 156 ICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVS 212
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
+L AC + G L G+ +HG+V + H G+
Sbjct: 213 ILGACGKLGCLNLGKGIHGLV-------------------------SKYPH-----GKEL 242
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
VVS N+++ YV C A+R+FDE+P +++VSWT+MI+G Q +++L LF EM
Sbjct: 243 VVS-NTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLG 301
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ E G L GRW+H Y+ + + V + +LI MYA C
Sbjct: 302 SGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWD-----VHIGTSLIDMYAKC 356
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I A Q+F +P ++ +W + I A G G+EAL F +V G RP+ IT
Sbjct: 357 GCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGT-----RPNEIT 411
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRT-WGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
+ V ACCH+G VDEGR F M + +SP +EHYGCMVDLL RA ++EA LI
Sbjct: 412 FLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINK 471
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
MP+ P+ + GALL + N EL + K V + +G VLLSN YA K+W
Sbjct: 472 MPMPPDVQIIGALLSASSTYGNVELTPEML-KTVRNFECQ-ESGVYVLLSNWYANNKKWA 529
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDS 538
+V +VR+ M E G+ K PG S I+++G H FV GD H S I+ +L+ + Q++++
Sbjct: 530 EVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHVLLNILANQTYLEG 589
Query: 539 Y 539
+
Sbjct: 590 H 590
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 203/440 (46%), Gaps = 56/440 (12%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS-DQLQHAHK 69
G S++ + +Q CN++++ QIH+Q++ + L ++TK +F+ +++
Sbjct: 4 GTHSMKWVLLDFIQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCN 63
Query: 70 LFSTID-NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
D + S+ N II GY + PW ++ YR +V P+ +T +L +C R
Sbjct: 64 FLKQFDWSFSSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFS 123
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ E +Q+H + + ++FV+ + ++ Y+
Sbjct: 124 GIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYS---------------------------- 155
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
CGD GA +VFD MP+R+VVSWT +I+G + G A++LF R V
Sbjct: 156 ---ICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALF---LRMDVAPNAAT 209
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G L LG+ IH +V++ + ++N L+ MY C + DA ++
Sbjct: 210 FVSILGACGKLGCLNLGKGIH-----GLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRL 264
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F ++P++ VSWTSMI + +E+L LF M+ G PD + L VL AC
Sbjct: 265 FDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLG-----SGFEPDGVILTSVLSACA 319
Query: 369 HAGFVDEGRRIFASMNRT---WGISPRIEHYGC-MVDLLSRAGFLDEAHGLIENMPLKPN 424
G +D GR + ++ + W + H G ++D+ ++ G ++ A + +P K N
Sbjct: 320 SLGLLDYGRWVHEYIDHSRIKWDV-----HIGTSLIDMYAKCGCIEMAQQMFNLLPSK-N 373
Query: 425 DALWGALLGGCQIHKNSELA 444
W A +GG I+ + + A
Sbjct: 374 IRTWNAYIGGLAINGHGQEA 393
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 214/401 (53%), Gaps = 11/401 (2%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
LQ+CNN + L QIH++++ L+ +I KL + ++ +A +F +++P
Sbjct: 26 FLQNCNNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFT 85
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
WN +IR Y S P KS+ ++ M+ P+ FTY F+++AC+ G++ G HG+ +
Sbjct: 86 WNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAI 145
Query: 142 VKGYCSNVFVETNLINFYAGRGG-VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
G+ S+V+V+ N++N Y GG V+ VFD M R+VVSW +++AG V+CG D AR
Sbjct: 146 KMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAR 205
Query: 201 RVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG 260
VF+ +P +NVVSWT MI G + +A LF M V G
Sbjct: 206 EVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLG 265
Query: 261 DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSW 320
LKLGR +H + +N + L AL+ MY+ CG + A +VF M R+ +W
Sbjct: 266 SLKLGRRMHDF-----ALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATW 320
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
+M+ +F G G E L LFK M GV PDAIT + VL AC ++ G++ F
Sbjct: 321 NTMLTSFGVHGFGNEVLDLFKEMEK-----AGVVPDAITFVGVLSACVQINDLELGQKYF 375
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+ M + ++P +EHY CMV L +RA L+E L + M L
Sbjct: 376 SLMTEHYSLTPILEHYTCMVGLYTRANELNEIRTLGDTMSL 416
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 242/499 (48%), Gaps = 53/499 (10%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
++T L F++ D AH++F + +WN ++ GYA+ +++ +R+MV
Sbjct: 174 LVTTYLKFWLVVD----AHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENG 229
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
P +T + +LS G G+ VHG + GY S+V V LI+ Y A
Sbjct: 230 VVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDAL 289
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKG 225
+VF+ M ++ + SWNSI++ + CGD G ++FD M V V+ TT++ C
Sbjct: 290 NVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTH-- 347
Query: 226 RCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA---RNQQ 282
L GR IH Y+ + RN
Sbjct: 348 ---------------------------------LAALMHGREIHGYMIVNGLGKEGRNND 374
Query: 283 QPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKT 342
V LNNAL+ MYA CG + DA VF M ++ SW MI + G G EAL F
Sbjct: 375 FDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTR 434
Query: 343 MVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL 402
M + P+ I+ + +L AC HAG V EG A M+ +G+ P +EHY C++D+
Sbjct: 435 MRQAQ-----LVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDM 489
Query: 403 LSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAG 462
L RAG L EA+ L+ MP K + W ALL C+I+K+++LA + K++ EL+ G G
Sbjct: 490 LCRAGKLVEAYDLMLTMPFKADPVGWRALLAACRIYKDTDLAEIAASKVI-ELEP-GHCG 547
Query: 463 YLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYF 522
VL+SN+Y R++ V +R M + VKK PG SWI++ VH F+ GD TH + F
Sbjct: 548 NYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKRPGCSWIELMNGVHVFLTGDRTHPQTDF 607
Query: 523 IYEILSEIIKQSHVDSYEP 541
IY L+ + Y P
Sbjct: 608 IYAGLNSLTAVLQEQGYVP 626
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 185/431 (42%), Gaps = 55/431 (12%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS--TID 75
T LQ C NL Q+H+ ++ NG IT +++ Y + +A K+F+ T
Sbjct: 34 TSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHH 93
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+ + +N II G+ + S Y+QM + P+ FT+ ++ AC G + E +
Sbjct: 94 DKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVK 153
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
++HG++ G +VFV + L+ Y V A VF+ + R VV WNS++ GY G
Sbjct: 154 KIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIG 213
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
F+ A +F M VV + G LS++ +
Sbjct: 214 CFEEALGMFRRMVENGVVPCRYTVTG---------VLSIYSVI----------------- 247
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
GD G+ +H + + + SV + NALI MY C DA VF M +
Sbjct: 248 -----GDFDNGQAVHGF-----LTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDE 297
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ SW S+I + G L LF M+ + V+PD +T+ VL AC H +
Sbjct: 298 KDMFSWNSIISVHQRCGDHYGTLKLFDRMLG-----NKVQPDLVTVTTVLPACTHLAALM 352
Query: 375 EGRRIFASM-NRTWGISPRIEHY------GCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
GR I M G R + ++D+ ++ G + +A + +NM K + A
Sbjct: 353 HGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEK-DVAS 411
Query: 428 WGALLGGCQIH 438
W ++ G +H
Sbjct: 412 WNIMITGYGMH 422
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 52/321 (16%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
V ++ + N +H + G ++ L+ Y A +F +D
Sbjct: 240 VLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKD 299
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN II + R + +++ + +M+ + +P+ T + +L AC L G ++HG
Sbjct: 300 MFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHG 359
Query: 139 IVLVKGY--------CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
++V G +V + L++ YA G + AR VFD M ++ V SWN ++ GY
Sbjct: 360 YMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGY 419
Query: 191 VSCGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G D A F M + N +S+ +++ C+ G K+ L EM
Sbjct: 420 GMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEM--------- 470
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
D K G PSV +I M G + +AY
Sbjct: 471 --------------DSKYG----------------VPPSVEHYTCVIDMLCRAGKLVEAY 500
Query: 307 QVFTKMPQRS-TVSWTSMIMA 326
+ MP ++ V W +++ A
Sbjct: 501 DLMLTMPFKADPVGWRALLAA 521
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 217/436 (49%), Gaps = 43/436 (9%)
Query: 66 HAHKLFSTI--DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA 123
+AH L + NP++ WN+IIR Y R +P ++ Y M+ P+ +T +L A
Sbjct: 47 YAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKA 106
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
+ ++ G+QVH + G SN + E+ IN Y
Sbjct: 107 VSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYC----------------------- 143
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
GDFD A +VFDE + SW +I+G +Q G A+ +F +M+R E
Sbjct: 144 --------KAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFE 195
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
GDL L +H YV Q A+ + + ++N+LI MY CG +
Sbjct: 196 PDGITMVSVMSACGSIGDLYLALQLHKYVFQ---AKTNEWTVILMSNSLIDMYGKCGRMD 252
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
AY+VF M R+ SWTSMI+ +A G KEALG F M G V+P+ +T I V
Sbjct: 253 LAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESG-----VKPNYVTFIGV 307
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC H G V EGR F M +GI+P+++HYGCMVDLL RAG D+A ++E MP+KP
Sbjct: 308 LSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKP 367
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAV 483
N +WG L+G C+ H N ++A V L A + G V+LSNIYA W++V +
Sbjct: 368 NSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWN--EGVYVVLSNIYANKGLWKEVERI 425
Query: 484 RQKMIEMGVKKPPGQS 499
R M E + K P S
Sbjct: 426 RSFMKEGRLAKIPAYS 441
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 118/301 (39%), Gaps = 38/301 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+HS + GL + ++ Y + AHK+F P WN +I G ++
Sbjct: 118 QVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGG 177
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL--VKGYCSNVFV 151
++ + M EP+G T ++SAC G L Q+H V + + +
Sbjct: 178 LAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILM 237
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+LI+ Y G ++ A VF M R+V SW
Sbjct: 238 SNSLIDMYGKCGRMDLAYEVFATMEDRNVSSW---------------------------- 269
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
T+MI G A G K+AL F MR + V+ G ++ GR+ ++
Sbjct: 270 ---TSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRF-YFD 325
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMAFAKQ 330
+ + I P ++ ++ + G+ DA ++ +MP + ++V W ++ A K
Sbjct: 326 MMKNIYGIT---PQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKH 382
Query: 331 G 331
G
Sbjct: 383 G 383
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNII--TKLLSFYIASDQLQHAHKLFSTID 75
+++ +C +I +L +Q+H V ++ T I+ L+ Y ++ A+++F+T++
Sbjct: 203 SVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATME 262
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ + + W +I GYA +++ C+ M + +PN T+ +LSACV GG ++EG
Sbjct: 263 DRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGR- 321
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
F + N Y ++ + D +G+ G
Sbjct: 322 --------------FYFDMMKNIYGITPQLQHYGCMVDLLGR---------------AGL 352
Query: 196 FDGARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQA 230
FD ARR+ +EMP++ N V W ++ C + G A
Sbjct: 353 FDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMA 388
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 262/538 (48%), Gaps = 66/538 (12%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFS----TI 74
+LL +++ L Q+ + + +GL + TKL+ F S L HA+ LF I
Sbjct: 11 SLLNKLSSMSELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILI 70
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG-GLLRE- 132
NP + N +IR ++ S P +++ Y QM+ + +T +F+L AC R L++E
Sbjct: 71 HNPFIS--NTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQES 128
Query: 133 ----------------GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG-- 174
G ++H V+ G+ ++ V+ +L+ FY+ G V AR++FD
Sbjct: 129 GSCDDDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIK 188
Query: 175 -----------------------------MGQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
M ++V+SWN+++A Y+ GD ARRVF
Sbjct: 189 DTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGC 248
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
MP RN VSW +MIAGC AL LF EM+ A V+ G L++G
Sbjct: 249 MPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIG 308
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
I Y ++ + + L NAL++MY CG + A+++F M ++ W +M++
Sbjct: 309 HKI--YESLKVC---EHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVI 363
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
A G +E LF M G +RPD +T I VL AC H G VD+ R F M +
Sbjct: 364 GLAVHGYCEEVFQLFTEMEESLGG--SIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVK 421
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELAS 445
+ I P +HYGCMVDLL+R G L+EA+ +I P + + LW LLG C+ N+ELA
Sbjct: 422 RYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAE 481
Query: 446 VVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
+ K +A+L Y VLLSNIYA A RW +V +R +M + V + G S I +
Sbjct: 482 -ISFKQLAKLKQLIDGDY-VLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 537
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 246/536 (45%), Gaps = 46/536 (8%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
+G ++ + ++L + +I++L IH + G K ++I LL Y +
Sbjct: 213 AGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERI 272
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A +F + N WN +I GYA+ ++ + +M+ EP L+AC
Sbjct: 273 ARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACAD 332
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
G L G VH +VL K ++F V NS+
Sbjct: 333 LGDLERGRFVHKLVLQKK-----------LDF--------------------EVPVMNSL 361
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
L+ Y C D A +F+ + + V+W MI G AQ G +AL LF M+ V+
Sbjct: 362 LSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDC 421
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
++ +WIH + R V + ALI MYA CG A
Sbjct: 422 FTLVAVITALADLSVNRMAKWIHG-----LAIRTFMDNDVYVATALIDMYAKCGATQTAR 476
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
++F M +R ++W +MI + GLGKEA+ +F M + V P+ T + V+ A
Sbjct: 477 KLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEA-----VIPNDTTFLSVISA 531
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C H+GFV+EG F SM +G+ P ++HY +VDLL RAG L A LIE MP+KP
Sbjct: 532 CSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKPGIT 591
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
+ GA+LG C+IHKN EL KL ELD D GY VLL+N+Y A W V VR
Sbjct: 592 VLGAMLGACKIHKNVELGEKAADKLF-ELDPD-EGGYHVLLANMYVSASMWDKVAKVRTA 649
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
M + G+ K PG S++++ VH F +G H + IY L + + Y PD
Sbjct: 650 MEKKGIHKTPGCSFVELRNEVHTFYSGSTNHPQAKKIYAFLEALGDKIRDAGYIPD 705
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 191/415 (46%), Gaps = 44/415 (10%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPST 79
+LL C + ++L QI ++ G ++ TKL++ + + A +F T+++
Sbjct: 24 SLLDHCTSTKHLHQILPLIIKTGSYYNDHLFQTKLINMFFKHGSINEASLVFDTVEHKQD 83
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
+++ +++GYA++ + ++ Y +M + P + +++LL C + L +G ++HG
Sbjct: 84 VLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFELEKGREIHGQ 143
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
V+V G+ ++F ++ FY G ++ A VF+ + ++ +VSW S++AGY
Sbjct: 144 VIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGY--------- 194
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
AQ G K+AL LF M+ A ++
Sbjct: 195 ----------------------AQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADI 232
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
DL++G+ IH Y R + V + NAL++MY CG A VF M + VS
Sbjct: 233 KDLRIGKSIHGY-----ALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVS 287
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
W +MI +A+ G +EA F M+ +GV P + ++ L AC G ++ GR +
Sbjct: 288 WNTMIDGYAQIGKSEEAFATFLKMLD-----EGVEPTRVAIMAALTACADLGDLERGRFV 342
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + + + ++ + S+ +D A + EN+ K N W A++ G
Sbjct: 343 HKLVLQK-KLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTN-VTWNAMILG 395
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 188/432 (43%), Gaps = 46/432 (10%)
Query: 10 SGRRSIQQHVFTLLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
G R + LLQ C ++ +IH QV++NG + ++ FY+ ++
Sbjct: 112 DGVRPVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDD 171
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A K+F + W +I GYA++ P ++++ + +M + + T +L A
Sbjct: 172 AFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVAD 231
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
LR G+ +HG L G+ S V SV+ N++
Sbjct: 232 IKDLRIGKSIHGYALRLGFESKV-----------------------------SVI--NAL 260
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
L Y CG AR VF+ M + VSW TMI G AQ G+ ++A + F +M VE
Sbjct: 261 LYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTR 320
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
GDL+ GR++H ++V + + V + N+L+ MY+ C + A
Sbjct: 321 VAIMAALTACADLGDLERGRFVH-----KLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAA 375
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+F + +++ V+W +MI+ +A+ G EAL LF M S V+PD TL+ V+ A
Sbjct: 376 SIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQS-----QEVKPDCFTLVAVITA 430
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
+ I RT+ + + ++D+ ++ G A L + M + +
Sbjct: 431 LADLSVNRMAKWIHGLAIRTF-MDNDVYVATALIDMYAKCGATQTARKLFDMMHER-HVI 488
Query: 427 LWGALLGGCQIH 438
W A++ G H
Sbjct: 489 TWNAMIDGYGTH 500
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 245/510 (48%), Gaps = 43/510 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + G+ + Y + A +F + + WN I +
Sbjct: 129 QIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDR 188
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ +++ + EPN T+ L+ACV L G Q+H ++ GY +V V
Sbjct: 189 RSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVAN 248
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVV 212
LI+FY CGD A VF+ + R NVV
Sbjct: 249 GLIDFYG-------------------------------KCGDIVSAEMVFNRIGNRKNVV 277
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SW +M+A Q ++A +F + R+ VE G L+LGR +H
Sbjct: 278 SWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRSVHALA 336
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ V N + + +AL+ MY CG I +A QVF+++P+R+ V+W +MI +A QG
Sbjct: 337 VKACVEDN-----IFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGD 391
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
AL LF+ M G G+RP +TLI +L C G V+ G +IF SM +GI P
Sbjct: 392 IDMALRLFEEMT---LGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPG 448
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EH+ C+VDLL R+G +D A+ I+NM ++P ++WGALLG C++H +EL + KL
Sbjct: 449 AEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLF 508
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
ELD + + V+LSN+ A A RW++ VR++M ++G+KK G SWI + +H F A
Sbjct: 509 -ELDHVDSGNH-VVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQA 566
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
D +H + I +L ++ Y PD
Sbjct: 567 KDSSHDRNSEIQAMLGKLRGGMKEAGYVPD 596
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 155/402 (38%), Gaps = 46/402 (11%)
Query: 35 IHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
IH+ ++ ++ + ++ L++ Y D L A + S + W +I G +
Sbjct: 28 IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNR 87
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ + M +PN FT+ + A + G+Q+HG+ L G +VFV
Sbjct: 88 RFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGC 147
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+ + Y G A ++FD M QR++ +WN+ ++ V
Sbjct: 148 SCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV---------------------- 185
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
Q R A+ F E E L LGR +H +
Sbjct: 186 ---------QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAF-- 234
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMAFAKQGL 332
+ R + V + N LI Y CG I A VF ++ R + VSW SM+ A +
Sbjct: 235 ---IVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHE 291
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ A +F + V P + VL AC G ++ GR + A + +
Sbjct: 292 EERACMVFLQARKE------VEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VEDN 344
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I +VD+ + G ++ A + +P + N W A++GG
Sbjct: 345 IFVGSALVDMYGKCGSIENAEQVFSELPER-NLVTWNAMIGG 385
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 11/264 (4%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N ++ Y + A+ V +R VV+WT++I+GC R AL F MRR V+
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ 105
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G+ IH + + V + + MY G G
Sbjct: 106 PNDFTFPCVFKASAFVQIPMTGKQIHG-----LALKGGMIYDVFVGCSCFDMYCKTGFRG 160
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
DA +F +MPQR+ +W + I + +A+ FK + V G P++IT
Sbjct: 161 DACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLC----VHG-EPNSITFCAF 215
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC ++ GR++ A + R G + ++D + G + A + + +
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRC-GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRK 274
Query: 424 NDALWGALLGGCQIHKNSELASVV 447
N W ++L + E A +V
Sbjct: 275 NVVSWCSMLAALVQNHEEERACMV 298
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 230/464 (49%), Gaps = 48/464 (10%)
Query: 13 RSIQQHVFTLLQSCNN-IQNLIQIHSQVVLNGLSQKTNIITKLL---SFYIASDQLQHAH 68
+S ++ + +LL +CN ++ QIH+ + + GL KLL + I+ L ++
Sbjct: 6 KSCEEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSL 65
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRG 127
+LF NP T ++N +IR + S TP S++ + Q++ P+ F+++F L
Sbjct: 66 RLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIAND 125
Query: 128 GL-LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
G R+G Q+H G+ ++FV T LI+ YA G E AR VFD M Q +VV+WN++
Sbjct: 126 GCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAV 185
Query: 187 LAGYVSCGDFDGA-------------------------------RRVFDEMPIRNVVSWT 215
+ CGD +GA RRVF EM +R+ SW+
Sbjct: 186 VTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWS 245
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
TMI G A+ G A F E+ R R G + G+ +H +++
Sbjct: 246 TMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFME-- 303
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQRSTVSWTSMIMAFAKQGLGK 334
+ V +NNALI Y+ CG + A VF M ++ VSWTSMI A A G
Sbjct: 304 ---KAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRAD 360
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ +F M G VRPD +T I +L AC H+G V++G +F+ M +GI P IE
Sbjct: 361 EAIRVFHEMEESG-----VRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIE 415
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
HYGCMVDL RA L +A+ I MP+ PN +W LLG C IH
Sbjct: 416 HYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIH 459
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 252/514 (49%), Gaps = 48/514 (9%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFY--IASDQLQHAHKLFSTID 75
H L C I + Q H+Q+++ G Q I KL+ Y + ++HA K+F +
Sbjct: 22 HYTDQLHHCKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLS 81
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
WN++I+GYA +++ Y M + A PN +TY F+L AC +G
Sbjct: 82 ERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRI 141
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG V+ G ++FV + FYA C +
Sbjct: 142 IHGNVVKCGLEFDLFVGNAFVAFYA-------------------------------KCKE 170
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV--EXXXXXXXXXX 253
+ +R+VFDEM R++VSW +M++G G +A+ LF +M R
Sbjct: 171 IEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVL 230
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
D+ G WIH Y+ + + P+V LI +Y++CG I A VF ++P
Sbjct: 231 PAFAEKADIHAGYWIHCYI---VKTGMKLDPAV--GCGLITLYSNCGYIRMAKAVFDQIP 285
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R+ + W+++I + G +EAL +F+ +V G +DG I + +L AC HAG
Sbjct: 286 DRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDG-----IVFLSLLSACSHAGMH 340
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
+EG +F +M T+G+ HY CMVDLL RAG L++A LI++MP++P ++GALLG
Sbjct: 341 EEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLG 399
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
+IHKN ELA + KL LD + A Y V+L+ +Y RW+D +R+ + E +K
Sbjct: 400 ASRIHKNIELAELAAEKLFV-LDPNNAGRY-VILAQMYEDEGRWKDAARLRKIIREKEIK 457
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
KP G S +++ F D TH + I+E L
Sbjct: 458 KPIGYSSVELESGHKKFGVNDETHPLTTEIFETL 491
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 258/514 (50%), Gaps = 44/514 (8%)
Query: 32 LIQIHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
L +IH + +G Q ++ ++ Y L +A +F +++ + WN +I G+
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHV 478
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
++ P K+++ Y M + EP+ FT + LLSAC R L G+++HG +L G+ + F
Sbjct: 479 QNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEF 538
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
+ +L++ Y V CG A+ FD M +N
Sbjct: 539 ICISLVSLY-------------------------------VQCGKILLAKLFFDNMEEKN 567
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+V W TMI G +Q AL +F +M +++ L+LG+ +H
Sbjct: 568 LVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHC 627
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ ++ + +LI MYA CG + + +F ++ + V+W +I +
Sbjct: 628 FA-----VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIH 682
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G++A+ LFK+M + G RPD++T I +L AC HAG V EG M +GI
Sbjct: 683 GHGRKAIELFKSMQNAG-----FRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIK 737
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P++EHY C+VD+L RAG L+EA L+ +P KP+ +W +LL C+ +++ ++ V K
Sbjct: 738 PKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANK 797
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
L+ EL D A Y VL+SN YA +W +V +RQ+M E+G++K G SWI+I G V F
Sbjct: 798 LL-ELGPDKAENY-VLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRF 855
Query: 511 VAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ GD + S I + E+ K+ + Y+PD +
Sbjct: 856 LVGDESLLQSMKIQQTWIELEKKINKIGYKPDTS 889
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 193/439 (43%), Gaps = 57/439 (12%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNI-ITKLLSFYIASD 62
V +S +Q + LLQ C +N+ +IH+ + + Q + IT+L++ Y D
Sbjct: 84 VVSSSNSKPKQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICD 143
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLL 121
+ +F+ + +WN ++ GY R+ +V + +M+S TE P+ FT ++
Sbjct: 144 SPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVI 203
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
ACV +R GE VHG L S+VFV LI Y G VE A VFD M QR++V
Sbjct: 204 KACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLV 263
Query: 182 SWNSILAGYVSCGDFDGARRVF------DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
SWNS++ + G F+ + +F DE + +V + T+I CA++G + + G
Sbjct: 264 SWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG 323
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
LKLG +++N++L+ M
Sbjct: 324 LA------------------------LKLGLC----------------GELKVNSSLLDM 343
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ CG + +A +V +++ +SW SMI ++K + A L + M + D V+
Sbjct: 344 YSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQME----DKVKV 398
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
+ +TL+ VL C + + I R I V ++ G L A G+
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 416 IENMPLKPNDALWGALLGG 434
M K + W AL+GG
Sbjct: 459 FCGMESKMVSS-WNALIGG 476
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 114/227 (50%), Gaps = 7/227 (3%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ +LL +C +++L +IH ++ NG I L+S Y+ ++ A F ++
Sbjct: 505 IASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME 564
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ WN +I G++++ P+ +++ + QM+S++ P+ + L AC + LR G++
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + + FV +LI+ YA G +EQ++++FD + + V+WN ++ GY G
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGH 684
Query: 196 FDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
A +F M + V++ ++ C G + L G+M+
Sbjct: 685 GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/491 (32%), Positives = 235/491 (47%), Gaps = 43/491 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++HS +V +G+ + + L+ Y ++ A K F V +I GY +
Sbjct: 400 EVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNG 459
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ +R ++ PN T + +L AC L+ G+++H +L KG
Sbjct: 460 LNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKG--------- 510
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+E V +SI Y G D A + F MP+++ V
Sbjct: 511 -----------LENVCQV-----------GSSITYMYAKSGRLDLAYQFFRRMPVKDSVC 548
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W MI +Q G+ + A+ LF +M + + L G+ +H +V
Sbjct: 549 WNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFV- 607
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
RN + + LI MY+ CG + A VF M ++ VSW S+I A+ G
Sbjct: 608 ----VRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRP 663
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+E L LF MV G ++PD +T +V++ AC HAG VDEG F M +GI R+
Sbjct: 664 RECLDLFHEMVEAG-----IQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARM 718
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EH+ CMVDL RAG L EA I++MP P+ WG+LLG C++H N ELA + LV
Sbjct: 719 EHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLV- 777
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
ELD + +GY VLLSN++A A W+ V+ VR M E GV+K PG SWI +NG H F A
Sbjct: 778 ELDPNN-SGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAA 836
Query: 514 DMTHKHSYFIY 524
D H S IY
Sbjct: 837 DGCHPQSVEIY 847
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 181/389 (46%), Gaps = 54/389 (13%)
Query: 30 QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY 89
Q + QIH++V++ G++ + +++L Y+ + LF + + WN +IRG+
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL--LREGEQVHGIVLVKGYCS 147
+ ++ + +M+ + P+ +T+ +++ AC GGL + + VH + G+
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKAC--GGLNNVPLCKMVHELARSMGFHM 210
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
++F+ ++LI Y G + A+++FD + R + WN +L GYV GDF+ A F EM
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 208 IR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
N VS+ +++ CA +G + + L G + R+ E
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFE-------------------- 310
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSM 323
P+V N +I MY+ CG + DA ++F MPQ TV+W +
Sbjct: 311 ------------------SDPTVA--NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGL 350
Query: 324 IMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM 383
I + + G EA+ LFK MV+ GV+ D+IT L + +G + + + + +
Sbjct: 351 IAGYVQNGFTDEAVALFKAMVT-----SGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Query: 384 NRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
R G+ + +VD+ + G ++ A
Sbjct: 406 VRH-GVPFDVYLKSALVDIYFKGGDVEMA 433
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 177/418 (42%), Gaps = 43/418 (10%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHII 86
NN+ +H G I + L+ Y + + A LF + +WN ++
Sbjct: 191 NNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVML 250
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
GY ++ ++ +++M ++ +PN ++ LLS C G++R G Q+HG+V+ G+
Sbjct: 251 NGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFE 310
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
S+ V +I Y+ G + AR +FD M Q V+WN ++AGYV
Sbjct: 311 SDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV--------------- 355
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
Q G +A++LF M + V+ G LK +
Sbjct: 356 ----------------QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCK 399
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+H Y + R+ V L +AL+ +Y G + A + F + T+MI
Sbjct: 400 EVHSY-----IVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISG 454
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+ GL EAL LF+ ++ +G+ P+ +T+ VL AC + G+ + + +
Sbjct: 455 YVLNGLNVEALNLFRWLIQ-----EGMVPNCLTMASVLPACAALASLKLGKELHCDILKK 509
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
G+ + + + +++G LD A+ MP+K + W ++ + ELA
Sbjct: 510 -GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 181/402 (45%), Gaps = 43/402 (10%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
IQ+H V+ +G + +++ Y L A K+F + T WN +I GY ++
Sbjct: 298 IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQN 357
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
++V ++ MV++ + + T++ L + ++ G L+ ++VH ++ G +V+++
Sbjct: 358 GFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLK 417
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+ L++ Y F G GD + A + F + + +V
Sbjct: 418 SALVDIY------------FKG-------------------GDVEMACKTFQQNTLVDVA 446
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
T MI+G G +AL+LF + + + LKLG+ +H +
Sbjct: 447 VCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDI 506
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
++ + + ++ +++ +MYA G + AYQ F +MP + +V W MI++F++ G
Sbjct: 507 LKKGL-----ENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGK 561
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ A+ LF+ M G G + D+++L L AC + + G+ + + R IS
Sbjct: 562 PELAIDLFRQM-----GTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDT 616
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++D+ S+ G L A + + M K N+ W +++
Sbjct: 617 FVA-STLIDMYSKCGKLALARSVFDMMDWK-NEVSWNSIIAA 656
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
+L YV C F +F + + + W +I G + G AL F M + V
Sbjct: 117 MLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPD 176
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQ-QPSVRLNNALIHMYASCGVIGD 304
++ L + +H +AR+ + + ++LI +Y G I D
Sbjct: 177 KYTFPYVIKACGGLNNVPLCKMVHE------LARSMGFHMDLFIGSSLIKLYTDNGYIHD 230
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F ++P R + W M+ + K G ALG F+ M + V+P++++ + +L
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN-----SCVKPNSVSFVCLL 285
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
C G V G ++ + R+ G ++ + S+ G L +A + + MP + +
Sbjct: 286 SVCATRGIVRAGIQLHGLVIRS-GFESDPTVANTIITMYSKCGNLFDARKIFDIMP-QTD 343
Query: 425 DALWGALLGG 434
W L+ G
Sbjct: 344 TVTWNGLIAG 353
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/534 (29%), Positives = 265/534 (49%), Gaps = 48/534 (8%)
Query: 19 VFTLLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L C +++ N + IH V+ +GL + L++ Y +LQ A +F ++
Sbjct: 225 VASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
WN II Y +++ P ++ ++ M P+ T L S + R
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 136 VHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+ G V+ + + +V + L+N YA GY++C
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAK--------------------------LGYMNC- 377
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX-XXXX 253
A VFD++P ++ +SW T++ G Q G +A+ + M R
Sbjct: 378 ----AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSII 433
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G L+ G IH + +N V + LI +Y CG + DA +F ++P
Sbjct: 434 PAYSHVGALQQGMKIHAKL-----IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ ++V W ++I + G G+EAL LFK M+++ V+ D IT + +L AC H+G V
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAER-----VKADHITFVSLLSACSHSGLV 543
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
DEG++ F M + +GI P ++HYGCMVDLL RAG+L++A+ L+ NMP++P+ ++WGALL
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C+I+ N+EL ++ +L+ E+D++ GY VLLSNIYA ++W+ VI VR + G++
Sbjct: 604 ACKIYGNAELGTLASDRLL-EVDSEN-VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLR 661
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
K PG S + + F G+ TH IY+ L + + Y PD + +
Sbjct: 662 KTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVY 715
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 185/421 (43%), Gaps = 57/421 (13%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L SC N+ ++H+ +++ G SQ + TKL++ Y+ + + F I +
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVST----EAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN II Y R +++ C Q+ S P+ +T+ +L ACV L +G++VH
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVH 144
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V G+ +VFV +L++ Y+ G ++ A VF M + V SWN++++G+ G+
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204
Query: 198 GARRVFDEMPIRNVVSWTTMIAG----CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
GA V + M V T +A CAQ
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQS----------------------------- 235
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
D+ G IH + V ++ V ++NALI+MY+ G + DA VF +M
Sbjct: 236 ------DDVINGVLIHLH-----VLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME 284
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R VSW S+I A+ + AL FK G + G+RPD +T++ +
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFK-----GMQLGGIRPDLLTVVSLTSIFSQLSDQ 339
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
R I + R + + +V++ ++ G+++ AH + + +P K + W L+
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTIS-WNTLVT 398
Query: 434 G 434
G
Sbjct: 399 G 399
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 154/348 (44%), Gaps = 46/348 (13%)
Query: 97 KSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLI 156
KSV + + +T + ++ L ++CV + +++H ++LV G N+ + T LI
Sbjct: 6 KSVSKFYKSATTSLHKDA-DFNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLI 61
Query: 157 NFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTT 216
N Y G + +R FD + ++++ SWNSI++ YV G + A +++ +
Sbjct: 62 NLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL--------FS 113
Query: 217 MIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI 276
M G G + F + +A V L G+ +H
Sbjct: 114 MCGG----GHLRPDFYTFPPILKACVS------------------LVDGKKVHC-----C 146
Query: 277 VARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEA 336
V + + V + +L+H+Y+ GV+ A++VF MP + SW +MI F + G A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 337 LGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY 396
LG+ M +GV+ D IT+ +L C + V G I + + G+ +
Sbjct: 207 LGVLNRMKG-----EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK-HGLDSDVFVS 260
Query: 397 GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
++++ S+ G L +A + + M ++ + W +++ + + + A
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTA 307
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/516 (32%), Positives = 252/516 (48%), Gaps = 30/516 (5%)
Query: 18 HVFTLLQS--CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
H +LLQ C +L+QI S ++ + + + LLS + +F +
Sbjct: 38 HFQSLLQPSHCQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLIFHHFN 97
Query: 76 NP-STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
NP T N +I Y S+ P K++ Y + N +T+ L+SAC + + G+
Sbjct: 98 NPLDTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGK 157
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
HG + G + VE +L + Y G VE AR +FDGM R +VSWNS++ GYV G
Sbjct: 158 MCHGQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVG 217
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D A ++FD MP RN+V+W +I+G ++ AL LF EM R R+
Sbjct: 218 DLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVT 277
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G LK G+ +H + R+ R+ S+ L+ ALI MY CG + A +VF +M
Sbjct: 278 ACGRSGRLKEGKSVHGSM-IRLFMRS----SLILDTALIDMYCKCGRVEAASKVFERMSS 332
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMV---------------SDGAGVDGVRPDAIT 359
R+ VSW +MI+ G ++ L LF MV S G+ + PD IT
Sbjct: 333 RNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEIT 392
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I +LCAC A + EGR F M +G+ P H+ CM +LL+ G +DEA ++NM
Sbjct: 393 FIGILCACARAELLSEGRSYFKQMIDVFGLKPNFAHFWCMANLLANVGLIDEAEECLKNM 452
Query: 420 P-----LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFA 474
+ LW +LLG C+ ++ L + KL+ + D + A Y LL IYA A
Sbjct: 453 AKFDGYISHESLLWASLLGLCRFKRDVYLGEQI-AKLLIDTDPNNLAYYQFLLI-IYAVA 510
Query: 475 KRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
+W++V V++ M E + PG + + + +VH+F
Sbjct: 511 AQWENVSRVQKLMKERKLDIIPGSNLVDLKNIVHNF 546
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 254/543 (46%), Gaps = 118/543 (21%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY-----RQMVSTEAEPNGF--- 115
++ KLF + WN +I GYA++ +++E + R +VS A NGF
Sbjct: 119 VEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLN 178
Query: 116 -------------------TYSFLLSACVRGGLL-----------REGEQVHGIV----- 140
+ S L+S VR G L EG++ +V
Sbjct: 179 GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNT 238
Query: 141 LVKGYCSNVFVET------------------------NLINF------YAGRGGVEQARH 170
L+ GY VE N++++ Y G V AR
Sbjct: 239 LIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARE 298
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ- 229
+FD M +R SWN+++ GYV GD + A ++F EMPI +V+SW ++I+G +Q G K+
Sbjct: 299 LFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRV 358
Query: 230 ------------------------------ALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
A+ LF +M+
Sbjct: 359 KEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTV 318
DL LG+ IH +V + +V P + +NN+LI MY+ CG IGDA VF +M + +
Sbjct: 419 VDLYLGKQIHQFVTKTVV------PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVI 472
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G +AL LF+ M G+ ++P IT I VL AC HAG V+EG+R
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERM----KGLK-IQPTYITFISVLNACAHAGLVEEGKR 527
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM +GI PR+EH+ +VD+L R G L EA LI NMP+KP+ A+WGALLG C++H
Sbjct: 528 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVH 587
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N +LA V L+ L+ + +A Y LL N+YA +W D VR M E VKK G
Sbjct: 588 SNVDLAQVAAKALI-RLEPESSAPY-ALLFNLYADLGQWDDAERVRALMEENNVKKQAGY 645
Query: 499 SWI 501
SWI
Sbjct: 646 SWI 648
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 136/344 (39%), Gaps = 63/344 (18%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD---FDGARRVFD 204
N ++I Y R + +AR +FD M R +VSWN I++GY SC + R++FD
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV---------------------- 242
MP R+ VSW T+I+G A+ GR QA+ +F M V
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 243 -----EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
E G L + I + + +++ V N LI Y
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEI---LVEYGNEGDEKDDLVYAYNTLIAGYG 244
Query: 298 SCGVIGDAYQVF-------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
G++ +A VF + +R+ VSW SM+M + K G A LF MV
Sbjct: 245 QRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
DA + V+ G ++E ++F M P + + ++ S
Sbjct: 305 E---------RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFS 350
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ G L ENMP K N W +++ G + KN + +E
Sbjct: 351 QIGDLKRVKEFFENMPHK-NLISWNSVIAGYE--KNEDYKGAIE 391
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 48/195 (24%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
G + AR +FD R+ V+WNS++ GYV + AR++FDEMP+R++VSW +I+G
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 221 -CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C ++ LF M + + W
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDC-------------------------VSW--------- 137
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
N +I YA G + A ++F MP+R+ VS +++ F G A+G
Sbjct: 138 ----------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 340 FKTM-VSDGAGVDGV 353
F+ M D A + G+
Sbjct: 188 FRKMGERDSASLSGL 202
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 254/543 (46%), Gaps = 118/543 (21%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY-----RQMVSTEAEPNGF--- 115
++ KLF + WN +I GYA++ +++E + R +VS A NGF
Sbjct: 119 VEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLN 178
Query: 116 -------------------TYSFLLSACVRGGLL-----------REGEQVHGIV----- 140
+ S L+S VR G L EG++ +V
Sbjct: 179 GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNT 238
Query: 141 LVKGYCSNVFVET------------------------NLINF------YAGRGGVEQARH 170
L+ GY VE N++++ Y G V AR
Sbjct: 239 LIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARE 298
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ- 229
+FD M +R SWN+++ GYV GD + A ++F EMPI +V+SW ++I+G +Q G K+
Sbjct: 299 LFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRV 358
Query: 230 ------------------------------ALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
A+ LF +M+
Sbjct: 359 KEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTV 318
DL LG+ IH +V + +V P + +NN+LI MY+ CG IGDA VF +M + +
Sbjct: 419 VDLYLGKQIHQFVTKTVV------PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVI 472
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G +AL LF+ M G+ ++P IT I VL AC HAG V+EG+R
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERM----KGLK-IQPTYITFISVLNACAHAGLVEEGKR 527
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM +GI PR+EH+ +VD+L R G L EA LI NMP+KP+ A+WGALLG C++H
Sbjct: 528 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVH 587
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N +LA V L+ L+ + +A Y LL N+YA +W D VR M E VKK G
Sbjct: 588 SNVDLAQVAAKALI-RLEPESSAPY-ALLFNLYADLGQWDDAERVRALMEENNVKKQAGY 645
Query: 499 SWI 501
SWI
Sbjct: 646 SWI 648
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 136/344 (39%), Gaps = 63/344 (18%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD---FDGARRVFD 204
N ++I Y R + +AR +FD M R +VSWN I++GY SC + R++FD
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV---------------------- 242
MP R+ VSW T+I+G A+ GR QA+ +F M V
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 243 -----EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
E G L + I + + +++ V N LI Y
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEI---LVEYGNEGDEKDDLVYAYNTLIAGYG 244
Query: 298 SCGVIGDAYQVF-------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
G++ +A VF + +R+ VSW SM+M + K G A LF MV
Sbjct: 245 QRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
DA + V+ G ++E ++F M P + + ++ S
Sbjct: 305 E---------RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFS 350
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ G L ENMP K N W +++ G + KN + +E
Sbjct: 351 QIGDLKRVKEFFENMPHK-NLISWNSVIAGYE--KNEDYKGAIE 391
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 48/195 (24%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
G + AR +FD R+ V+WNS++ GYV + AR++FDEMP+R++VSW +I+G
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 221 -CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C ++ LF M + + W
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDC-------------------------VSW--------- 137
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
N +I YA G + A ++F MP+R+ VS +++ F G A+G
Sbjct: 138 ----------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 340 FKTM-VSDGAGVDGV 353
F+ M D A + G+
Sbjct: 188 FRKMGERDSASLSGL 202
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 254/543 (46%), Gaps = 118/543 (21%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY-----RQMVSTEAEPNGF--- 115
++ KLF + WN +I GYA++ +++E + R +VS A NGF
Sbjct: 119 VEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLN 178
Query: 116 -------------------TYSFLLSACVRGGLL-----------REGEQVHGIV----- 140
+ S L+S VR G L EG++ +V
Sbjct: 179 GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNT 238
Query: 141 LVKGYCSNVFVET------------------------NLINF------YAGRGGVEQARH 170
L+ GY VE N++++ Y G V AR
Sbjct: 239 LIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARE 298
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ- 229
+FD M +R SWN+++ GYV GD + A ++F EMPI +V+SW ++I+G +Q G K+
Sbjct: 299 LFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRV 358
Query: 230 ------------------------------ALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
A+ LF +M+
Sbjct: 359 KEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTV 318
DL LG+ IH +V + +V P + +NN+LI MY+ CG IGDA VF +M + +
Sbjct: 419 VDLYLGKQIHQFVTKTVV------PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVI 472
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G +AL LF+ M G+ ++P IT I VL AC HAG V+EG+R
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERM----KGLK-IQPTYITFISVLNACAHAGLVEEGKR 527
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM +GI PR+EH+ +VD+L R G L EA LI NMP+KP+ A+WGALLG C++H
Sbjct: 528 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVH 587
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N +LA V L+ L+ + +A Y LL N+YA +W D VR M E VKK G
Sbjct: 588 SNVDLAQVAAKALI-RLEPESSAPY-ALLFNLYADLGQWDDAERVRALMEENNVKKQAGY 645
Query: 499 SWI 501
SWI
Sbjct: 646 SWI 648
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 136/344 (39%), Gaps = 63/344 (18%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD---FDGARRVFD 204
N ++I Y R + +AR +FD M R +VSWN I++GY SC + R++FD
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV---------------------- 242
MP R+ VSW T+I+G A+ GR QA+ +F M V
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 243 -----EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
E G L + I + + +++ V N LI Y
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEI---LVEYGNEGDEKDDLVYAYNTLIAGYG 244
Query: 298 SCGVIGDAYQVF-------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
G++ +A VF + +R+ VSW SM+M + K G A LF MV
Sbjct: 245 QRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
DA + V+ G ++E ++F M P + + ++ S
Sbjct: 305 E---------RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFS 350
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ G L ENMP K N W +++ G + KN + +E
Sbjct: 351 QIGDLKRVKEFFENMPHK-NLISWNSVIAGYE--KNEDYKGAIE 391
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 48/195 (24%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
G + AR +FD R+ V+WNS++ GYV + AR++FDEMP+R++VSW +I+G
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 221 -CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C ++ LF M + + W
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDC-------------------------VSW--------- 137
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
N +I YA G + A ++F MP+R+ VS +++ F G A+G
Sbjct: 138 ----------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 340 FKTM-VSDGAGVDGV 353
F+ M D A + G+
Sbjct: 188 FRKMGERDSASLSGL 202
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 254/543 (46%), Gaps = 118/543 (21%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY-----RQMVSTEAEPNGF--- 115
++ KLF + WN +I GYA++ +++E + R +VS A NGF
Sbjct: 119 VEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLN 178
Query: 116 -------------------TYSFLLSACVRGGLL-----------REGEQVHGIV----- 140
+ S L+S VR G L EG++ +V
Sbjct: 179 GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNT 238
Query: 141 LVKGYCSNVFVET------------------------NLINF------YAGRGGVEQARH 170
L+ GY VE N++++ Y G V AR
Sbjct: 239 LIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARE 298
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ- 229
+FD M +R SWN+++ GYV GD + A ++F EMPI +V+SW ++I+G +Q G K+
Sbjct: 299 LFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRV 358
Query: 230 ------------------------------ALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
A+ LF +M+
Sbjct: 359 KEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 418
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTV 318
DL LG+ IH +V + +V P + +NN+LI MY+ CG IGDA VF +M + +
Sbjct: 419 VDLYLGKQIHQFVTKTVV------PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVI 472
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G +AL LF+ M G+ ++P IT I VL AC HAG V+EG+R
Sbjct: 473 TWNAMIGGYAFHGFAAQALELFERM----KGLK-IQPTYITFISVLNACAHAGLVEEGKR 527
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM +GI PR+EH+ +VD+L R G L EA LI NMP+KP+ A+WGALLG C++H
Sbjct: 528 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVH 587
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N +LA V L+ L+ + +A Y LL N+YA +W D VR M E VKK G
Sbjct: 588 SNVDLAQVAAKALI-RLEPESSAPY-ALLFNLYADLGQWDDAERVRALMEENNVKKQAGY 645
Query: 499 SWI 501
SWI
Sbjct: 646 SWI 648
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 136/344 (39%), Gaps = 63/344 (18%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD---FDGARRVFD 204
N ++I Y R + +AR +FD M R +VSWN I++GY SC + R++FD
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV---------------------- 242
MP R+ VSW T+I+G A+ GR QA+ +F M V
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 243 -----EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
E G L + I + + +++ V N LI Y
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEI---LVEYGNEGDEKDDLVYAYNTLIAGYG 244
Query: 298 SCGVIGDAYQVF-------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
G++ +A VF + +R+ VSW SM+M + K G A LF MV
Sbjct: 245 QRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV 304
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
DA + V+ G ++E ++F M P + + ++ S
Sbjct: 305 E---------RDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFS 350
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ G L ENMP K N W +++ G + KN + +E
Sbjct: 351 QIGDLKRVKEFFENMPHK-NLISWNSVIAGYE--KNEDYKGAIE 391
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 48/195 (24%)
Query: 163 GGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG-- 220
G + AR +FD R+ V+WNS++ GYV + AR++FDEMP+R++VSW +I+G
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 221 -CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C ++ LF M + + W
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDC-------------------------VSW--------- 137
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
N +I YA G + A ++F MP+R+ VS +++ F G A+G
Sbjct: 138 ----------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 340 FKTM-VSDGAGVDGV 353
F+ M D A + G+
Sbjct: 188 FRKMGERDSASLSGL 202
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 245/476 (51%), Gaps = 45/476 (9%)
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRG 127
K+F + WN +I G+A++ ++++ R+M + + +P+ FT S +L
Sbjct: 181 KVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEH 240
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+ +G+++HG + G+ +VF+ ++LI+ YA
Sbjct: 241 VDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYA--------------------------- 273
Query: 188 AGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
C + + R F +P ++ +SW ++IAGC Q G + L F M + V+
Sbjct: 274 ----KCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAV 329
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
L LGR +H + + N+ S +L+ MYA CG I A
Sbjct: 330 SFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIAS-----SLVDMYAKCGNIKMARY 384
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF ++ +R V+WT++IM A G +A+ LF+ M+ DG VRP + + VL AC
Sbjct: 385 VFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDG-----VRPCYVAFMAVLTAC 439
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP-LKPNDA 426
HAG VDEG R F SM R +GI+P +EHY + DLL RAG L+EA+ I NM ++P +
Sbjct: 440 SHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGS 499
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
+W LL C+ HK+ ELA V KL++ +D++ Y VL+SNIY+ A+RW+D +R
Sbjct: 500 VWSILLAACRAHKSVELAEKVLDKLLS-VDSENMGAY-VLMSNIYSAAQRWKDAARLRIH 557
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
M + G+KK P SWI++ VH F+AGD +H + I + L +++Q + Y D
Sbjct: 558 MRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVID 613
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 179/408 (43%), Gaps = 33/408 (8%)
Query: 34 QIHSQVV-LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT-VWNHIIRGYAR 91
Q+H+ +V G NI+ +LS Y + LQH+ LF+++ +P W+ II+ Y
Sbjct: 30 QLHAHIVKTKGTLHSDNIL--VLSLYSNLNLLQHSLHLFNSLPSPPPPLAWSSIIKCYTS 87
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
S + M S PN + LL A + +H + G S++++
Sbjct: 88 HSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYI 147
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
LIN YA + VF G+ + D ++VFD MP+R+V
Sbjct: 148 ANALINTYAKFHNAGKVFDVFPKRGESGI----------------DCVKKVFDMMPVRDV 191
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
VSW T+IAG AQ G +AL + EM + +++ D+ G+ IH
Sbjct: 192 VSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHG 251
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
Y RN V + ++LI MYA C + + + F +P++ +SW S+I +
Sbjct: 252 Y-----AVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQN 306
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G LG F+ M+ + V+P A++ V+ AC H + GR++ + R G
Sbjct: 307 GEFDRGLGFFRRMLK-----ENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVR-LGFD 360
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+VD+ ++ G + A + + + K + W A++ GC +H
Sbjct: 361 DNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMH 407
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH V NG I + L+ Y ++L+ + + F + WN II G ++
Sbjct: 248 EIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNG 307
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ + +R+M+ +P ++S ++ AC L G Q+HG ++ G+ N F+ +
Sbjct: 308 EFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIAS 367
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-- 211
+L++ YA G ++ AR+VFD + +R +V+W +I+ G G A +F+ M V
Sbjct: 368 SLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRP 427
Query: 212 --VSWTTMIAGCAQKGRCKQALSLFGEMRR 239
V++ ++ C+ G + F M R
Sbjct: 428 CYVAFMAVLTACSHAGLVDEGWRYFNSMER 457
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 171/518 (33%), Positives = 258/518 (49%), Gaps = 43/518 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV--WNHIIRGYAR 91
Q+H +L G ++ +L+ Y +L A ++F + + WN +I +
Sbjct: 161 QLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQ 220
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
K++ + +M E + FT + +L+A L G Q HG ++ G+ N V
Sbjct: 221 HREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHV 280
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
+ LI+ Y+ + A H G + C +VF+E+P ++
Sbjct: 281 GSGLIDLYS-----KCAPH------------------GMLEC------MKVFEEIPKPDL 311
Query: 212 VSWTTMIAGCAQ-KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
V W TMI+G +Q + C+ ALS F EM+R +G+ +H
Sbjct: 312 VLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHA 371
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ + N+ V +NNA + MY+ CG + DA ++F MP+++TVS SMI +A+
Sbjct: 372 LAIKSDIPCNR----VSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQH 427
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G E+L LF+ M+ + + P+ IT I VL AC H G VDEG + F M +GI
Sbjct: 428 GAEIESLQLFELMLQEK-----IVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIE 482
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
P EHY CM+DLL RAG L++A +IE MP P W ALLG C+ H N ELA K
Sbjct: 483 PEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAANK 542
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDF 510
+ +L+ AA Y V+LSN+YA A RW++ V++ M E GVKK PG SWI+I+ VH F
Sbjct: 543 FL-QLEPYNAAPY-VMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVF 600
Query: 511 VAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
VA D +H I+ +SE++ + Y DI A +
Sbjct: 601 VAEDTSHPRIKEIHTYMSELLMKLKQAGYVADIRLALV 638
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 156/376 (41%), Gaps = 50/376 (13%)
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
AH+LF I P +N +I +AR ++V ++++ +GFT S ++SA V
Sbjct: 95 AHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVE 154
Query: 127 G-GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ--RSVVSW 183
GL+R Q+H L+ GY V ++ Y G + +A VF MG+ R +VSW
Sbjct: 155 DVGLVR---QLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSW 211
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N+ MI C Q +AL LFGEM R +E
Sbjct: 212 NA-------------------------------MIVACGQHREGAKALRLFGEMERMGLE 240
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
DL G H + + RN + + LI +Y+ C G
Sbjct: 241 VDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSH-----VGSGLIDLYSKCAPHG 295
Query: 304 --DAYQVFTKMPQRSTVSWTSMIMAFAK-QGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ +VF ++P+ V W +MI F++ + L ++AL F+ M G PD +
Sbjct: 296 MLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQR-----VGFCPDDCSF 350
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+ V+ AC + G+++ A ++ R+ V + S+ G L +A + + MP
Sbjct: 351 VCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMP 410
Query: 421 LKPNDALWGALLGGCQ 436
+ +L + G Q
Sbjct: 411 EQNTVSLNSMIAGYAQ 426
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 144/333 (43%), Gaps = 26/333 (7%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
T+ LL C+ G+ +H + + ++ + Y+ G A F
Sbjct: 12 TFRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFT 71
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
G +V S+N+I+ + A ++FDE+P +VVS+ T+IA A++G C QA+S+F
Sbjct: 72 GYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFK 131
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
E+R V D+ L R +H + ++ SV NA++
Sbjct: 132 EVR--EVGLVLDGFTLSGVISASVEDVGLVRQLHCFA---LLCGYDCYASV--CNAVLAC 184
Query: 296 YASCGVIGDAYQVFTKMPQ--RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
Y G + +A++VF +M + R VSW +MI+A + G +AL LF M G VD
Sbjct: 185 YGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMF 244
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC-MVDLLSRAGFLDEA 412
++ G G+ I + +R H G ++DL S+
Sbjct: 245 TMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRN-------SHVGSGLIDLYSKCA----P 293
Query: 413 HGLIENMPL-----KPNDALWGALLGGCQIHKN 440
HG++E M + KP+ LW ++ G H++
Sbjct: 294 HGMLECMKVFEEIPKPDLVLWNTMISGFSQHED 326
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 244/510 (47%), Gaps = 43/510 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + G+ + Y + A +F + + + WN I +
Sbjct: 129 QIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDR 188
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ +++ + EPN T+ L+ACV L G Q+H ++ GY +V V
Sbjct: 189 RSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVAN 248
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVV 212
LI+FY CGD A VF + R NVV
Sbjct: 249 GLIDFYG-------------------------------KCGDIVSAEMVFSRIGNRKNVV 277
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SW +M+ Q ++A +F ++R+ VE G L+LGR +H
Sbjct: 278 SWCSMLTALVQNHEEERACMVFLQVRK-EVEPTDFMISSVLSACAELGGLELGRSVHALA 336
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ V N + + +AL+ +Y CG I +A QVF+++P+ + V+W +MI +A QG
Sbjct: 337 VKACVKDN-----IFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGD 391
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
AL LF+ M G G+RP +TL+ +L C G V+ G +IF SM +GI P
Sbjct: 392 IDMALRLFEEMT---LGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPG 448
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EH+ C+VDLL R+G +D A+ I+NMP++P ++WGALLG C++H +EL + KL
Sbjct: 449 AEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAAEKLF 508
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
ELD + + V+LSN+ A A RW++ VR++M ++G+KK G SWI + +H F A
Sbjct: 509 -ELDHVDSGNH-VVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQA 566
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
D +H + I +L ++ Y PD
Sbjct: 567 KDSSHDRNSEIQAMLGKLRGGMKEAGYVPD 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 156/402 (38%), Gaps = 46/402 (11%)
Query: 35 IHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
IH+ ++ ++ + ++ L++ Y D L A + S + W +I G +
Sbjct: 28 IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNR 87
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ + M +PN FT+ + A + G+Q+HG+ L G +VFV
Sbjct: 88 RFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFVGC 147
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+ + Y G A ++FD M R++ +WN+ ++ V
Sbjct: 148 SCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAV---------------------- 185
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
Q R ++ F E E L LGR +H +
Sbjct: 186 ---------QDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAF-- 234
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMAFAKQGL 332
+ R + V + N LI Y CG I A VF+++ R + VSW SM+ A +
Sbjct: 235 ---IVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHE 291
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ A +F + + V P + VL AC G ++ GR + A + +
Sbjct: 292 EERACMVFLQVRKE------VEPTDFMISSVLSACAELGGLELGRSVHALAVKAC-VKDN 344
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I +VDL + G ++ A + +P + N W A++GG
Sbjct: 345 IFVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGG 385
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 11/273 (4%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N ++ Y + A+ V +R VV+WT++I+GC R AL F MRR V+
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQ 105
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
G+ IH + + V + + MY G G
Sbjct: 106 PNDFTFPCVFKASALMQIPMTGKQIHG-----LALKGGMIYDVFVGCSCFDMYCKTGFHG 160
Query: 304 DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
DA +F +MP R+ +W + I + + + FK + V G P++IT
Sbjct: 161 DACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLC----VHG-EPNSITFCAF 215
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP 423
L AC ++ GR++ A + R G + ++D + G + A + + +
Sbjct: 216 LNACVDMMRLNLGRQLHAFIVRC-GYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRK 274
Query: 424 NDALWGALLGGCQIHKNSELASVVEPKLVAELD 456
N W ++L + E A +V ++ E++
Sbjct: 275 NVVSWCSMLTALVQNHEEERACMVFLQVRKEVE 307
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 171/570 (30%), Positives = 276/570 (48%), Gaps = 79/570 (13%)
Query: 39 VVLNGLSQKTNI-ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWK 97
++ + + Q+ + ++S Y+ + + A K+F + + W ++RGY + +
Sbjct: 73 LLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEE 132
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV----------LVKGYCS 147
+ + + +M N +++ ++ ++ + + +++ ++ ++ GYC
Sbjct: 133 AEKLFWEM----PRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQ 188
Query: 148 -----------------NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
NVF T +++ YA G V+ AR +F+ M +R+ VSW ++L GY
Sbjct: 189 VGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGY 248
Query: 191 VSCGDFDGARRVFDEMPIRNVV-------------------------------SWTTMIA 219
G A +F+ MP++ +V +W MI
Sbjct: 249 TQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIK 308
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
+KG +AL LF M+R V L GR +H R+V R
Sbjct: 309 VFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVH----ARLV-R 363
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
++ + + + LI MY CG + A +F + + V W SMI +++ GLG+EAL +
Sbjct: 364 SEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNV 423
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
F M S G V+PD +T I VL AC ++G V EG IF +M T+ + P IEHY CM
Sbjct: 424 FHDMCSSG-----VQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACM 478
Query: 400 VDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDG 459
VDLL RAG +DEA L+E MP++P+ +WGALLG C+ H +LA V KL A+L+
Sbjct: 479 VDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKL-AKLEPKN 537
Query: 460 AAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD-MTHK 518
A Y VLLS++YA RW+DV +R+K I V K PG SWI++ VH F GD +H
Sbjct: 538 AGPY-VLLSHMYATKGRWRDVEVLRKK-INRRVIKFPGCSWIEVEKKVHMFTGGDSKSHP 595
Query: 519 HSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
+ I ++L ++ Y PD G+F+
Sbjct: 596 EQHMITQMLEKLSGFLREAGYCPD--GSFV 623
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 181/417 (43%), Gaps = 43/417 (10%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTV--WNHIIRGYARSHTPWKSVECYRQMVSTE 109
T +S Y + +A K+F P T+ WN ++ Y SH P ++ + QM
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM---- 78
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
+ N +++ ++S V+ G++ + +V ++ + NV T+++ Y G VE+A
Sbjct: 79 PQRNTVSFNGMISGYVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAE 134
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ 229
+F M +R+VVSW ++ G + D A+++FD +P ++VV T MI G Q GR +
Sbjct: 135 KLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDE 194
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR-----------IVA 278
A LF EM+ V G + + R + + +R
Sbjct: 195 ARELFDEMKVRNV----FTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQ 250
Query: 279 RNQQQPSVRL-----------NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+ + + L N +I + G + A +F M +R +W +MI F
Sbjct: 251 SGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVF 310
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
++GL EALGLF M +G + + ++I VL C +D GR++ A + R+
Sbjct: 311 ERKGLDLEALGLFARMQREGVAL-----NFPSMISVLSVCASLASLDHGRQVHARLVRS- 364
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
+ ++ + + G L A G+ K + +W +++ G H E A
Sbjct: 365 EFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHGLGEEA 420
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 65/298 (21%)
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG--MGQRSVVSWNSILAGYVSCGDF 196
+V + CSN T+ I+ Y G + AR VFD + QR++ SWN++++ Y
Sbjct: 13 MVQARSLCSN----TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKP 68
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A +FD+MP RN VS+ MI+G + G A +F M V
Sbjct: 69 RDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNV-------------- 114
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
+ W +++ Y G++ +A ++F +MP+R+
Sbjct: 115 -----------VSW-------------------TSMVRGYVQEGMVEEAEKLFWEMPRRN 144
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VSWT MI K+ +A LF M+ + D + + ++ C G +DE
Sbjct: 145 VVSWTVMIGGLLKESRIDDAKKLF-DMIPE--------KDVVVVTNMIGGYCQVGRLDEA 195
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
R +F M + + MV ++ G +D A L E MP + N+ W A+L G
Sbjct: 196 RELFDEMK-----VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER-NEVSWTAMLMG 247
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 90/207 (43%), Gaps = 34/207 (16%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++L C ++ +L Q+H+++V + Q + + L++ Y+ L A +F+
Sbjct: 338 MISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFL 397
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+WN +I GY++ +++ + M S+ +P+ T+ +LSAC G ++EG +
Sbjct: 398 FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFE 457
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+ + C+ Y G+E + D +G+ G
Sbjct: 458 IFEAM----KCT-----------YQVEPGIEHYACMVDLLGR---------------AGR 487
Query: 196 FDGARRVFDEMPIR-NVVSWTTMIAGC 221
D A + ++MP+ + + W ++ C
Sbjct: 488 VDEAMELVEKMPMEPDAIVWGALLGAC 514
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 261/530 (49%), Gaps = 54/530 (10%)
Query: 26 CNNIQNL---------IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
CN + +L +Q+H+ ++ GL + L++FY + + ++F +
Sbjct: 24 CNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPH 83
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
S T W+ +I +A++ P S+ +R M+ P+ + +C L + +
Sbjct: 84 KSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKML 143
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H L Y ++FV +++I+ YA CGD
Sbjct: 144 HCFALKTAYHLDIFVGSSVIDMYA-------------------------------KCGDI 172
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A VFDEMP RNVVSW+ +I G Q G ++L LF
Sbjct: 173 CYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLR 232
Query: 257 XXXGD--LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G L++GR IH + + S + ++LI +Y+ CGV+ +AY VF ++
Sbjct: 233 VCGGSTLLQMGRLIHG-----LSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV 287
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R+ W +M++A A+ + LF M S V G++ + IT + VL AC HAG V+
Sbjct: 288 RNLGMWNAMLIACAQHAHTDKTFELFDKMKS----VGGMKANFITFLCVLYACSHAGLVE 343
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+G+ F M + +GI P +HY MVDLL RAG L++A LIE MP++P +++WGALL G
Sbjct: 344 KGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C++H N++LAS V + V+EL + ++G V+LSN YA A RW++ R+ M + G+KK
Sbjct: 403 CRLHGNTKLASYVADR-VSELGS-VSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKK 460
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
G SW++ +H F AGD +H S IY+ L E+ ++ Y D +
Sbjct: 461 ETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTS 510
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 255/503 (50%), Gaps = 17/503 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH +L G ++ L++ Y +++ A K+F + WN +I GY++S
Sbjct: 176 QIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSG 235
Query: 94 TPWKSVECYRQMVSTEAE---PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ Y +M+ E + PN T ++ AC + L G +VH + G ++VF
Sbjct: 236 FYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVF 295
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
+ +I YA G + AR +FD MG++ VS+ SI++GY+ G D A V +
Sbjct: 296 LCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPG 355
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRR--ARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+ +W +I G Q + ++AL L EM ++ +L+ + +
Sbjct: 356 LSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEV 415
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H Y +R +N + + A++ YA G I A +VF + RS + WTS+I A+A
Sbjct: 416 HGYAIRRSYDQN-----IYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYA 470
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
G ALGL+ M+ G ++PD +TL VL AC H+G V+E +F +M G
Sbjct: 471 SHGDASLALGLYNQMLDRG-----IQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHG 525
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
I P +EHY CMV +LSRAG L EA I MP +P +WGALL G I+ + E+
Sbjct: 526 IQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFAC 585
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
L E++ + Y ++++N+Y+ A RW++ +R++M + G K G SWI+ +G +
Sbjct: 586 DHLF-EIEPEHTGNY-IIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIETSGKLL 643
Query: 509 DFVAGDMTHKHSYFIYEILSEII 531
F+A DM+++ S IY +L ++
Sbjct: 644 GFIAKDMSNEMSDEIYALLKGLL 666
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 23 LQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
+Q C N I+ Q+H++ ++ I TKL++FY S+ +++A +F I + ++
Sbjct: 56 IQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNS 115
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVST---EAEPNGFTYSFLLS--ACVRGGLLREGE 134
WN +I Y ++ + VS+ P+ FT + +L A + +
Sbjct: 116 FSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAK 175
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+H L++G+ S+V V L+ Y G +E AR VFD M +R +V+WN+++ GY G
Sbjct: 176 QIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSG 235
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
++ +R++ EM G KG A+++ M+
Sbjct: 236 FYEECKRLYLEM------------LGLEGKGILPNAVTIGSVMQAC-------------- 269
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
DL G +H R + + + V L NA+I MYA CG + A ++F +M +
Sbjct: 270 --GQSKDLSFGMEVH-----RFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGE 322
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ VS+ S+I + G EAL + K + + G
Sbjct: 323 KDEVSYRSIISGYMINGFVDEALDVLKGIENPG 355
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y + C L+R+G+Q+H + F+ T LI FYA + AR+VFD +
Sbjct: 52 YGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIP 111
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVF 203
++ SWNS++ Y S F+ A +F
Sbjct: 112 HKNSFSWNSMIIAYTSKSLFNDALSLF 138
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 255 bits (652), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 254/511 (49%), Gaps = 44/511 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW-NHIIRGYARS 92
QIHS V + L+ Y + + A + + + + N +I GY++
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQC 365
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+++ + ++ + N T S +L + ++ +Q+H + + G S+ +V
Sbjct: 366 GDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYV- 424
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
NS+L Y C D A ++F+E ++V
Sbjct: 425 ------------------------------INSLLDTYGKCSHIDEASKIFEERTWEDLV 454
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
++T+MI +Q G ++AL L+ +M+ A ++ + G+ +H +
Sbjct: 455 AYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHA 514
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ + +N+L++MYA CG I DA + F+++PQR VSW++MI A+ G
Sbjct: 515 -----IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGH 569
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
GKEAL +F M+ D V P+ ITL+ VLCAC HAG V+EG++ F +M +GI P
Sbjct: 570 GKEALIMFNQMLKDC-----VSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPT 624
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
EH+ CM+DLL R+G L+EA L+ ++P + + ++WGALLG +IHKN EL +L
Sbjct: 625 QEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLF 684
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
L+ D +G LVLL+NIYA A W++V VR+ M VKK PG SWI++ +H F+
Sbjct: 685 T-LEPD-KSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDRIHTFIV 742
Query: 513 GDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
GD H S I+ L E+ + Y P I
Sbjct: 743 GDRNHSRSDEIFAKLDELSELLSKAGYSPII 773
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 43/403 (10%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV-WNHIIRGYAR 91
+++H+ ++ G S+ +++ LL+FY S + +A L P T V W+ +I Y +
Sbjct: 1 MELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQ 60
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ +++ + +M + + N FT+ +L AC L G++VH + +V G+ S+ FV
Sbjct: 61 NGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
L+ YA G ++ +F + + VVSWN++ + +V
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV-------------------- 160
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
Q + + LF M +V D +GR +H
Sbjct: 161 -----------QSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL 209
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+ + + Q S NAL+ MYA G I DA VF +M TVSW ++I
Sbjct: 210 LMK--LGHGLDQFSA---NALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
AL L M G+ P+ TL L AC G D GR+I + + S
Sbjct: 265 YNDLALILLNEMKKSGSC-----PNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSD 319
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G ++DL S+ +D+A + MP K + AL+ G
Sbjct: 320 LFVAVG-LIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG 361
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 44/402 (10%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ Y + +++ A +F + +P T WN II G ++ +M + + PN
Sbjct: 225 LVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPN 284
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT S L AC GL G Q+H + S++FV LI+ Y+
Sbjct: 285 VFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYS------------- 331
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN-VVSWTTMIAGCAQKGRCKQALS 232
C D ARR +D MP ++ +++ +I+G +Q G +QA+S
Sbjct: 332 ------------------KCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAIS 373
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
LF E+ ++ +K+ + IH + + + N+L
Sbjct: 374 LFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIH-----TLSIKCGIYSDFYVINSL 428
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ Y C I +A ++F + V++TSMI A+++ G +EAL L+ M V
Sbjct: 429 LDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQM-----QVAD 483
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
++PD +L AC + ++G+++ + +G I +V++ ++ G +++A
Sbjct: 484 IKPDPFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMSDIFASNSLVNMYAKCGSIEDA 542
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
+P + W A++GG H + + A ++ +++ +
Sbjct: 543 DRAFSEIPQR-GIVSWSAMIGGLAQHGHGKEALIMFNQMLKD 583
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 184/455 (40%), Gaps = 84/455 (18%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L++C+ ++L ++H+ V++G + L+ Y Q + KLF I P
Sbjct: 88 TVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEP 147
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV---RGGLLREGE 134
WN + + +S ++V+ +++MV + PN ++ S +L+AC GG+ G
Sbjct: 148 GVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGI---GR 204
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
VHG+++ G+ + F L++ YA G +E A VF M VSWN+I+AG V
Sbjct: 205 TVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D A + +EM + G C +L ++
Sbjct: 265 YNDLALILLNEMK---------------KSGSCPNVFTLSSALKAC-------------- 295
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G LGR IH + + + LI +Y+ C ++ DA + + MP
Sbjct: 296 --AAMGLKDLGRQIH-----SCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPT 348
Query: 315 RS-TVSWTSMIMAFAKQGLGKEALGLF---------------KTMVSDGAGVD------- 351
+ ++ ++I +++ G ++A+ LF T++ A +
Sbjct: 349 KDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQ 408
Query: 352 --------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
G+ D + +L +DE +IF RTW + Y M+
Sbjct: 409 IHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEE--RTW---EDLVAYTSMITAY 463
Query: 404 SRAGFLDEAHGLIENM---PLKPNDALWGALLGGC 435
S+ G +EA L M +KP+ + +LL C
Sbjct: 464 SQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNAC 498
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 31/294 (10%)
Query: 184 NSILAGYVSCGDFDGARRVFDE-MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
N +L Y + F A + D+ R VVSW+ +I+ Q G K+AL F EM V
Sbjct: 20 NHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGV 79
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ DL +G+ +H +V+ + V +N L+ MYA CG
Sbjct: 80 KSNEFTFPTVLKACSIKKDLNMGKKVH---AMTVVSGFESDAFV--SNTLVVMYAKCGQF 134
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
D+ ++F + + VSW ++ + E + LFK MV VRP+ +L +
Sbjct: 135 SDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVE-----GKVRPNEYSLSI 189
Query: 363 VLCACCHAGFVDEGRRIFASMNRT-WGISPRIEH------YGCMVDLLSRAGFLDEAHGL 415
+L AC AG D G + RT G+ ++ H +VD+ ++AG +++A +
Sbjct: 190 ILNAC--AGLRDGG------IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDV 241
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSN 469
M + P+ W A++ GC +H+ ++LA + L+ E+ G+ + LS+
Sbjct: 242 FREM-IHPDTVSWNAIIAGCVLHEYNDLALI----LLNEMKKSGSCPNVFTLSS 290
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 7/231 (3%)
Query: 16 QQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
Q + T+L+S ++Q + QIH+ + G+ +I LL Y + A K+F
Sbjct: 387 QTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFE 446
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+ +I Y++ ++++ Y QM + +P+ F S LL+AC +
Sbjct: 447 ERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQ 506
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+Q+H + G+ S++F +L+N YA G +E A F + QR +VSW++++ G
Sbjct: 507 GKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQ 566
Query: 193 CGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G A +F++M N ++ +++ C G + F M
Sbjct: 567 HGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 255 bits (652), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 253/526 (48%), Gaps = 50/526 (9%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST------IDNPSTTV 81
+I ++H GL T++ T L++ Y L A LF + ++ P
Sbjct: 285 DINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAP---- 340
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
WN +I GY+++ +++E + +M + +P+ +T+ + ++ L+ ++ HG+ L
Sbjct: 341 WNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVAL 400
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G FD M + N++ YV C + +
Sbjct: 401 KCG---------------------------FDAM---EISVLNALADAYVKCESLEAGEK 430
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
VF +M +++VSWTTM+ Q +AL++F +M
Sbjct: 431 VFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCL 490
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L+ G+ IH ++ + + +ALI MY+ CG + +A +F ++ TV+WT
Sbjct: 491 LEYGQQIHG-----LICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWT 545
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
++I +A+ GL ++AL LF+ M V+ +A+TL+ +L AC H G V++G IF
Sbjct: 546 AIISTYAQHGLVEDALQLFRKMEQSA-----VKANAVTLLCILFACSHGGMVEDGLEIFN 600
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNS 441
M T+G+ P +EHY C+VDLL R G LDEA I+ MP++P++ +W LLG C+IH N+
Sbjct: 601 QMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNA 660
Query: 442 ELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
EL K+++ + VLLSN Y + +D I +R M E G++K PG SWI
Sbjct: 661 ELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWI 720
Query: 502 QINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
+ G VH F A D H IY +L E+ ++ EP+ + F
Sbjct: 721 SVRGEVHKFYARDQQHPQKDKIYTMLEELTRRIKHMHCEPEFSLIF 766
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 153/360 (42%), Gaps = 58/360 (16%)
Query: 17 QHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNII--TKLLSFYIASDQLQHAHKLF 71
Q + LL+SC +L Q IH V+ +G + N++ ++ Y A K+F
Sbjct: 67 QPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVF 126
Query: 72 STIDNPSTTVWNHII-----RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
+ + W +I GY R ++E + M+ +GF +S +L +CV
Sbjct: 127 DGMSERNVFSWTVMIVASNEHGYYR-----YALELFCMMLEQGLLLDGFAFSAVLQSCVG 181
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
+ GE VH V+V+G+ + V T+L+N YA G E + +VF+ M + VSWN++
Sbjct: 182 LDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAM 241
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
++G+ S G + A M I N VS C K A+ L G++ R
Sbjct: 242 ISGFTSNGLYLQAFDFLINM-IENGVSPNKTTFLCISK-----AVGLLGDINRC------ 289
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
+H Y + + N + ALI+MY+ CGV+ DA
Sbjct: 290 -------------------HEVHRYAYEWGLDSN-----TSVGTALINMYSKCGVLCDAR 325
Query: 307 QVFTKMPQRSTVS--WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
+F V+ W +MI +++ G EAL +F M + V+PD T V
Sbjct: 326 VLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQ-----NDVKPDLYTFCCVF 380
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 132/330 (40%), Gaps = 43/330 (13%)
Query: 107 STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
+ + +PN LL +C + G L++ +HG VL G+
Sbjct: 59 TQQKQPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGF--------------------- 97
Query: 167 QARHVFDGMGQR-SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKG 225
G R ++V N ++ Y C D+D AR+VFD M RNV SWT MI + G
Sbjct: 98 ---------GDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHG 148
Query: 226 RCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
+ AL LF M + + G +H ++V R +
Sbjct: 149 YYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFGEMVH----AQVVVRGFLMHA 204
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
V + +L+++YA G+ + VF M + VSW +MI F GL +A M+
Sbjct: 205 V-VGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIE 263
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
+GV P+ T + + A G ++ + WG+ ++++ S+
Sbjct: 264 -----NGVSPNKTTFLCISKAVGLLGDINRCHEVH-RYAYEWGLDSNTSVGTALINMYSK 317
Query: 406 AGFLDEAHGLIENMPLKP-NDALWGALLGG 434
G L +A L ++ +A W A++ G
Sbjct: 318 CGVLCDARVLFDSKFANCLVNAPWNAMITG 347
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 263/541 (48%), Gaps = 54/541 (9%)
Query: 12 RRSIQQHVFTL---LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITK--LLSFY-IASD 62
R ++ + FT+ L++C +++ L+ +H + G +Q ++I L+ Y D
Sbjct: 100 RDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIG-TQGSSIYVDNALMDMYATCCD 158
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+ +A +F I + W +I GY + + +RQM E E + F++S +S
Sbjct: 159 SMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVS 218
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC G G+QVH V+ G+ SN+ V
Sbjct: 219 ACASIGSSNLGKQVHAAVINHGFESNLPV------------------------------- 247
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
N+IL Y C A+++F EM ++ ++W T+IAG + ++L +F +M
Sbjct: 248 MNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAG-FETLDSYESLCIFSQMVSEGF 306
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
L G+ +H + R + N + L+NALI MYA CG +
Sbjct: 307 SPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNN-----LELSNALIDMYAKCGNV 361
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
D++++F+ M + VSWTSM++ + G GKEA+ LF MV G ++PD I +
Sbjct: 362 ADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSG-----IKPDKIVFMA 416
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
VL AC HAG VDEG R F M + ++P + Y C+VDLLSRAG + EA+ LIENMP K
Sbjct: 417 VLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFK 476
Query: 423 PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIA 482
P++++W ALLG C+ +K + + K V E+ + A Y VLLSN A W D +
Sbjct: 477 PDESIWVALLGACKKYKQPSIQKLAALK-VLEMKPNKAGTY-VLLSNFSAAEGNWADFAS 534
Query: 483 VRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
+R+ M KK G+SWI++ V F+ GD+ + + E+L +I+ Y D
Sbjct: 535 LRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRHMKDAGYVLD 594
Query: 543 I 543
+
Sbjct: 595 L 595
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 173/397 (43%), Gaps = 54/397 (13%)
Query: 48 TNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS 107
T + T L+ Y + AH LF + + W +I GY + ++ + M+
Sbjct: 41 TGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLR 100
Query: 108 TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-CSNVFVETNLINFYAG-RGGV 165
+PN FT S +L AC L G+ VHG+ + G S+++V+ L++ YA +
Sbjct: 101 DGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSM 160
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGC 221
+ AR VF+ +G ++ VSW +++ GY D G RVF +M + + S++ ++ C
Sbjct: 161 DNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSAC 220
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
A G LG+ +H V +
Sbjct: 221 AS-----------------------------------IGSSNLGKQVH-----AAVINHG 240
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
+ ++ + NA++ MY C +A Q+F +M Q+ T++W ++I F E+L +F
Sbjct: 241 FESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIFS 299
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
MVS +G P+ T V+ AC + + G+++ + G+ +E ++D
Sbjct: 300 QMVS-----EGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR-GLDNNLELSNALID 353
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ ++ G + ++H + M N W +++ G H
Sbjct: 354 MYAKCGNVADSHKIFSGMR-HTNLVSWTSMMIGYGAH 389
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 267/533 (50%), Gaps = 50/533 (9%)
Query: 18 HVFTL---LQSCN--NIQNL-IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+VFTL L++C +++L QIHS V + L+ Y + + A + +
Sbjct: 284 NVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAY 343
Query: 72 STIDNPSTTVW-NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL 130
+ + N +I GY++ +++ + ++ + N T S +L + +
Sbjct: 344 DLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQI 403
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY 190
+ +Q+H + + G S+ +V NS+L Y
Sbjct: 404 KVCKQIHTLSIKCGIYSDFYV-------------------------------INSLLDTY 432
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
C D A ++F+E ++V++T+MI +Q G ++AL L+ +M+ A ++
Sbjct: 433 GKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCS 492
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
+ G+ +H + + + +N+L++MYA CG I DA + F+
Sbjct: 493 SLLNACANLSAYEQGKQLHVHA-----IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFS 547
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++PQR VSW++MI A+ G GKEAL +F M+ D V P+ ITL+ VLCAC HA
Sbjct: 548 EIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDC-----VSPNHITLVSVLCACNHA 602
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
G V+EG++ F +M +GI P EH+ CM+DLL R+G L+EA L+ ++P + + ++WGA
Sbjct: 603 GLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGA 662
Query: 431 LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEM 490
LLG +IHKN EL +L L+ D +G LVLL+NIYA A W++V VR+ M
Sbjct: 663 LLGAARIHKNVELGEKAAERLFT-LEPD-KSGTLVLLANIYASAGMWENVANVRKVMQNS 720
Query: 491 GVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
VKK PG SWI++ +H F+ GD H S I+ L E+ + Y P I
Sbjct: 721 NVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSPII 773
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 43/403 (10%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV-WNHIIRGYAR 91
+++H+ ++ G S+ +++ LL+FY S + +A L P T V W+ +I Y +
Sbjct: 1 MELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQ 60
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ +++ + +M + + N FT+ +L AC L G++VH + +V G+ S+ FV
Sbjct: 61 NGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFV 120
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
L+ YA G ++ +F + + VVSWN++ + +V
Sbjct: 121 SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV-------------------- 160
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
Q + + LF M +V D +GR +H
Sbjct: 161 -----------QSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL 209
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+ + + Q S NAL+ MYA G I DA VF +M TVSW ++I
Sbjct: 210 LMK--LGHGLDQFSA---NALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
AL L M G+ P+ TL L AC G D GR+I + + S
Sbjct: 265 YNDLALILLNEMKKSGSC-----PNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSD 319
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G ++DL S+ +D+A + MP K + AL+ G
Sbjct: 320 LFVAVG-LIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISG 361
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 173/402 (43%), Gaps = 44/402 (10%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
L+ Y + +++ A +F + +P T WN II G ++ +M + + PN
Sbjct: 225 LVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPN 284
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
FT S L AC GL G Q+H + S++FV LI+ Y+
Sbjct: 285 VFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYS------------- 331
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN-VVSWTTMIAGCAQKGRCKQALS 232
C D ARR +D MP ++ +++ +I+G +Q G +QA+S
Sbjct: 332 ------------------KCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAIS 373
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
LF E+ ++ +K+ + IH + + + N+L
Sbjct: 374 LFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIH-----TLSIKCGIYSDFYVINSL 428
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ Y C I +A ++F + V++TSMI A+++ G +EAL L+ M V
Sbjct: 429 LDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQM-----QVAD 483
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
++PD +L AC + ++G+++ + +G I +V++ ++ G +++A
Sbjct: 484 IKPDPFVCSSLLNACANLSAYEQGKQLHVHAIK-FGFMSDIFASNSLVNMYAKCGSIEDA 542
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
+P + W A++GG H + + A ++ +++ +
Sbjct: 543 DRAFSEIPQR-GIVSWSAMIGGLAQHGHGKEALIMFNQMLKD 583
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 184/455 (40%), Gaps = 84/455 (18%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+L++C+ ++L ++H+ V++G + L+ Y Q + KLF I P
Sbjct: 88 TVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEP 147
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV---RGGLLREGE 134
WN + + +S ++V+ +++MV + PN ++ S +L+AC GG+ G
Sbjct: 148 GVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGI---GR 204
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
VHG+++ G+ + F L++ YA G +E A VF M VSWN+I+AG V
Sbjct: 205 TVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHE 264
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
D A + +EM + G C +L ++
Sbjct: 265 YNDLALILLNEM---------------KKSGSCPNVFTLSSALKAC-------------- 295
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G LGR IH + + + LI +Y+ C ++ DA + + MP
Sbjct: 296 --AAMGLKDLGRQIH-----SCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPT 348
Query: 315 RS-TVSWTSMIMAFAKQGLGKEALGLF---------------KTMVSDGAGVD------- 351
+ ++ ++I +++ G ++A+ LF T++ A +
Sbjct: 349 KDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQ 408
Query: 352 --------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
G+ D + +L +DE +IF RTW + Y M+
Sbjct: 409 IHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFE--ERTW---EDLVAYTSMITAY 463
Query: 404 SRAGFLDEAHGLIENM---PLKPNDALWGALLGGC 435
S+ G +EA L M +KP+ + +LL C
Sbjct: 464 SQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNAC 498
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 31/294 (10%)
Query: 184 NSILAGYVSCGDFDGARRVFDE-MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
N +L Y + F A + D+ R VVSW+ +I+ Q G K+AL F EM V
Sbjct: 20 NHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGV 79
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ DL +G+ +H + + + ++N L+ MYA CG
Sbjct: 80 KSNEFTFPTVLKACSIKKDLNMGKKVH-----AMTVVSGFESDAFVSNTLVVMYAKCGQF 134
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
D+ ++F + + VSW ++ + E + LFK MV VRP+ +L +
Sbjct: 135 SDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVE-----GKVRPNEYSLSI 189
Query: 363 VLCACCHAGFVDEGRRIFASMNRT-WGISPRIEH------YGCMVDLLSRAGFLDEAHGL 415
+L AC AG D G + RT G+ ++ H +VD+ ++AG +++A +
Sbjct: 190 ILNAC--AGLRDGG------IGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDV 241
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSN 469
M + P+ W A++ GC +H+ ++LA + L+ E+ G+ + LS+
Sbjct: 242 FREM-IHPDTVSWNAIIAGCVLHEYNDLALI----LLNEMKKSGSCPNVFTLSS 290
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 7/231 (3%)
Query: 16 QQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
Q + T+L+S ++Q + QIH+ + G+ +I LL Y + A K+F
Sbjct: 387 QTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFE 446
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+ +I Y++ ++++ Y QM + +P+ F S LL+AC +
Sbjct: 447 ERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQ 506
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+Q+H + G+ S++F +L+N YA G +E A F + QR +VSW++++ G
Sbjct: 507 GKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQ 566
Query: 193 CGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
G A +F++M N ++ +++ C G + F M
Sbjct: 567 HGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 256/549 (46%), Gaps = 47/549 (8%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
+P SG + + + C +++ +++ ++ + ++T Y + + +
Sbjct: 37 LPVSGF-FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTG----YSQNGRFED 91
Query: 67 AHKLFSTIDNP----STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
A LF + W+ +I GYA+ ++++ +RQM PN T LLS
Sbjct: 92 ALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLS 151
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
C G L G++ H C + I F + + H D +
Sbjct: 152 GCASVGALLHGKETH--------CYS-------IKF------ILKGEHNDD---NDDLAG 187
Query: 183 WNSILAGYVSCGDFDGARRVFDEM--PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
N+++ Y C + AR +FDE+ R+VV+WT MI G AQ G AL LF EM +
Sbjct: 188 INALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKF 247
Query: 241 R--VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ L+ G+ IH YV +R + + N LI MY+
Sbjct: 248 DNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRR---SRIDSDVLFVANCLIDMYSK 304
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
G + A VF M +R+ +SWTS++ + G ++A +F M + +DG I
Sbjct: 305 SGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDG-----I 359
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T +VVL AC H+G VD G +F M++ + + P +EHY CM DL RAG L EA LI +
Sbjct: 360 TFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLIND 419
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
M ++P +W ALL C+ H N ELA KL+ EL D Y LLSNIYA A+RW+
Sbjct: 420 MSMEPTPVVWIALLSACRTHSNVELAEFAAKKLL-ELKADNDGTY-TLLSNIYANARRWK 477
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDS 538
DV +R M G+KK PG SW+Q + F GD TH S IYE L+++I++
Sbjct: 478 DVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQKIYETLADLIQRIKAIG 537
Query: 539 YEPDITGAF 547
Y P A
Sbjct: 538 YVPQTNFAL 546
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 166/351 (47%), Gaps = 18/351 (5%)
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
G+L + V I+ V G+ FV L++ YA G +E A V++ M + VV+WN+++
Sbjct: 25 GILPDTVGVVNILPVSGF----FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMV 80
Query: 188 AGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
GY G F+ A +F +M +VV+W+++I+G AQ+G +A+ +F +M
Sbjct: 81 TGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCR 140
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA--RNQQQPSVRLNNALIHMYASCGV 301
G L G+ H Y + I+ N + NALI MYA C
Sbjct: 141 PNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKS 200
Query: 302 IGDAYQVFTKM--PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ A +F ++ R V+WT MI +A+ G AL LF M + + P+ T
Sbjct: 201 LEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFD---NCIVPNDFT 257
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG-CMVDLLSRAGFLDEAHGLIEN 418
+ VL AC + G++I A + R I + C++D+ S++G +D A + ++
Sbjct: 258 ISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 317
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE-LDTDGAAGYLVLLS 468
M K N W +LL G +H SE A V ++ E L DG +VL +
Sbjct: 318 MS-KRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYA 367
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 256/529 (48%), Gaps = 50/529 (9%)
Query: 21 TLLQSCNNIQNLIQ------IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
T+L C+ ++ I IH V + G ++ + L++ Y + K+F +
Sbjct: 151 TMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEM 210
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ W +I G A++ S+ + QM PN TY L AC +LR+G
Sbjct: 211 IERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDG 270
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+++HG++ G S++ +E+ L++ Y+ C
Sbjct: 271 QKIHGLLWKLGMQSDLCIESALMDLYS-------------------------------KC 299
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G D A ++F+ + VS T ++ AQ G ++A+ +F +M +E
Sbjct: 300 GSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVL 359
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
L LG+ IH + ++ N P V N L++MY+ CG + D+ VF +M
Sbjct: 360 GVFGVGTYLALGKQIHSLIIKKNFCEN---PFV--GNGLVNMYSKCGDLSDSLLVFYQMT 414
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
Q+++VSW S+I AFA+ G G +AL ++ M V+GV P +T + +L AC HAG V
Sbjct: 415 QKNSVSWNSVIAAFARHGDGFKALQFYEEM-----RVEGVAPTDVTFLSLLHACSHAGLV 469
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
++G + SM GISPR EHY C+VD+L RAG L+EA IE +P +W ALLG
Sbjct: 470 EKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLG 529
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C IH +SE+ +L + A VL++NIY+ W++ + ++M EMGV
Sbjct: 530 ACSIHGDSEMGKYAADRLFSAAPASPAP--YVLMANIYSSEGNWKERASSIKRMKEMGVA 587
Query: 494 KPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
K G SWI+I V+ FV GD H + I+ +LS ++K + Y PD
Sbjct: 588 KEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDEGYVPD 636
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
FDG + ++ WNS+L+ Y CG+F A VFD MP+R+ VSW TMI+G + G +
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSF 128
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI---VARNQQQPSVRL 288
F +M + L+LG I V Q I V + + +
Sbjct: 129 KFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLG--ISTSVTQMIHGLVFVGGFEREITV 186
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
NALI Y C +VF +M +R+ V+WT++I A+ +++L LF M G+
Sbjct: 187 GNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGS 246
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
V P+ +T + L AC + +G++I + + G+ + ++DL S+ G
Sbjct: 247 ----VSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKL-GMQSDLCIESALMDLYSKCGS 301
Query: 409 LDEAHGLIEN 418
LD A + E+
Sbjct: 302 LDAAWQIFES 311
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 170/379 (44%), Gaps = 66/379 (17%)
Query: 5 RFVPASGRRSIQQH--VFTLLQSCNNIQNLI---QIHSQVV-------LNGLSQKTNII- 51
+++ S +S+ H + +LL C +NL IH++++ +G SQ+ +
Sbjct: 21 QYLFPSTTKSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDG-SQRNALFI 79
Query: 52 -TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
LLS Y + ++A +F + T WN +I G+ R+ S + ++QM +
Sbjct: 80 WNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNR 139
Query: 111 EPNGF---TYSFLLSAC--VRGGLLREGEQ-VHGIVLVKGYCSNVFVETNLINFYAGRGG 164
F T + +LS C +R G+ Q +HG+V V G+ + V LI Y
Sbjct: 140 VCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCEC 199
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI-----RNVVSWTTMIA 219
Q R VFD M +R+VV+W ++++G ++ + R+F +M NV+++ + +
Sbjct: 200 FSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLM 259
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
C+ L + L+ G+ IH ++ +
Sbjct: 260 ACS-------GLQV----------------------------LRDGQKIH-----GLLWK 279
Query: 280 NQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGL 339
Q + + +AL+ +Y+ CG + A+Q+F + VS T +++AFA+ G +EA+ +
Sbjct: 280 LGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQI 339
Query: 340 FKTMVSDGAGVDGVRPDAI 358
F MV+ G VD A+
Sbjct: 340 FTKMVALGMEVDANMVSAV 358
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 10/234 (4%)
Query: 14 SIQQHVFTLLQS---CNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
S+ +V T L S C+ +Q L +IH + G+ I + L+ Y L A
Sbjct: 246 SVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAA 305
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
++F + + I+ +A++ ++++ + +MV+ E + S +L G
Sbjct: 306 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVG 365
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
L G+Q+H +++ K +C N FV L+N Y+ G + + VF M Q++ VSWNS++
Sbjct: 366 TYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVI 425
Query: 188 AGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
A + GD A + ++EM + V V++ +++ C+ G ++ + L M
Sbjct: 426 AAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESM 479
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/506 (32%), Positives = 233/506 (46%), Gaps = 48/506 (9%)
Query: 30 QNLIQIHSQVVLNGLSQKTNIIT--KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
N+ Q H + N LS NI++ +++ Y+ +Q+ H LF + WN ++
Sbjct: 22 NNVKQAHKLLDENLLS--CNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLS 79
Query: 88 GYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
G+ R+ C+ QM PN +T S LL A + L QVH + G+
Sbjct: 80 GFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYL 139
Query: 148 NVFVETNLINFYAGR-------------------------------GGVEQARHVFDGMG 176
NVFV ++LI YAG G A+ FD M
Sbjct: 140 NVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMP 199
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
QR+++SW +++ GYV + AR VFD+M RNVVSWT MI+G Q R AL LF
Sbjct: 200 QRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVL 259
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M + L +G +H + + +A + V +L+ MY
Sbjct: 260 MFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIAND-----VIWLTSLVDMY 314
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A CG + A+ VF + ++ VSW ++I +A GL AL F M G PD
Sbjct: 315 AKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT------PD 368
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+T + VL AC HAG V+EG + F M +GI +EHY CMVDL RAG DEA LI
Sbjct: 369 EVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLI 428
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+NMP +P+ LWGALL C +H N EL + + L++ Y V LS I
Sbjct: 429 KNMPFEPDVVLWGALLAACGLHSNLELGEYAAER-IRRLESSHPVSYSV-LSKIQGEKGV 486
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQ 502
W V +R M E G+KK SW++
Sbjct: 487 WSSVNELRDTMKERGIKKQTAISWVE 512
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 246/483 (50%), Gaps = 46/483 (9%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD--QLQHAHKLFSTIDNPST 79
L IQ+L QIH+Q+++ ++L S + S L+HA ++FS++ P++
Sbjct: 45 LADKSTTIQHLKQIHAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNS 104
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR-GGLLREGEQVHG 138
+WN +IR + + P S+ Y QM P T+ FLL AC +L +QVH
Sbjct: 105 FMWNTLIRAH-QQQQPHISLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHA 163
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ G C + V N ++ GY GD
Sbjct: 164 HVVKFGLCFDCHV-------------------------------GNGLVRGYSVSGDLVD 192
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
AR VFDE+P++N+ WTTMI G AQ +AL LF M E
Sbjct: 193 ARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCAR 252
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
G L+LG IH +++ + V + V L AL++MYA G I A ++F +MP+R+ V
Sbjct: 253 SGCLELGERIHEFMRVKGV-----EVGVILGTALVYMYAKNGDILTARKLFDEMPERNVV 307
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI A G ++ALGLF+ M + + V P+A+T + VL ACCHAG +D GR
Sbjct: 308 TWNAMICGLASHGHVEDALGLFECMKEE----EIVVPNAVTFVGVLSACCHAGLIDVGRE 363
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+F SM GI P IEHYGCMVDLL R G L EA +I+ MP KP+ + GALL + +
Sbjct: 364 VFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNN 423
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N+E+A V K + LD G V LSN+YA A +WQ+V +R+ M E +KK PG
Sbjct: 424 GNTEVAERVV-KQILTLDPHN-HGVHVSLSNMYAEAGQWQEVSRLRKMMKEEKLKKAPGW 481
Query: 499 SWI 501
S +
Sbjct: 482 SLV 484
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 124/232 (53%), Gaps = 10/232 (4%)
Query: 17 QHVFT-LLQSCNNIQNLI----QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
+H F LL++C+++ N++ Q+H+ VV GL ++ L+ Y S L A +F
Sbjct: 138 KHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVF 197
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
I + ++W +I GYA++ ++++ + +MV EPNG T + +LS C R G L
Sbjct: 198 DEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLE 257
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
GE++H + VKG V + T L+ YA G + AR +FD M +R+VV+WN+++ G
Sbjct: 258 LGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLA 317
Query: 192 SCGDFDGARRVF-----DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
S G + A +F +E+ + N V++ +++ C G +F M+
Sbjct: 318 SHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMK 369
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 239/502 (47%), Gaps = 42/502 (8%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNP----STTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+++ Y + + + A LF + W+ +I GYA+ ++++ +RQM
Sbjct: 22 MVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCS 81
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
PN T LLS C G L G++ H C + I F + +
Sbjct: 82 CRPNVVTLMSLLSGCASVGALLHGKETH--------CYS-------IKF------ILKGE 120
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM--PIRNVVSWTTMIAGCAQKGRC 227
H D + N+++ Y C + AR +FDE+ R+VV+WT MI G AQ G
Sbjct: 121 HNDD---NDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDA 177
Query: 228 KQALSLFGEMRRAR--VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
AL LF EM + + L+ G+ IH YV +R
Sbjct: 178 NHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRR---SRIDSDV 234
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
+ + N LI MY+ G + A VF M +R+ +SWTS++ + G ++A +F M
Sbjct: 235 LFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRK 294
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
+ +DG IT +VVL AC H+G VD G +F M++ + + P +EHY CM DL R
Sbjct: 295 EALVLDG-----ITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGR 349
Query: 406 AGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLV 465
AG L EA LI +M ++P +W ALL C+ H N ELA KL+ EL D Y
Sbjct: 350 AGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLL-ELKADNDGTY-T 407
Query: 466 LLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYE 525
LLSNIYA A+RW+DV +R M G+KK PG SW+Q + F GD TH S IYE
Sbjct: 408 LLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQKIYE 467
Query: 526 ILSEIIKQSHVDSYEPDITGAF 547
L+++I++ Y P A
Sbjct: 468 TLADLIQRIKAIGYVPQTNFAL 489
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/589 (28%), Positives = 269/589 (45%), Gaps = 92/589 (15%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H+ VV +G + + L+S Y L+ A +F ++ WN +I GY R+
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC----------------VRGGLLREGEQV 136
+ E + +M +P T++ ++ +C ++ G + +
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVI 333
Query: 137 HGIVLVKGYCS----------------NVFVETNLINFYAGRGGVEQARHVFDGMG---- 176
+++ C NV T +I+ GG +QA ++F M
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393
Query: 177 -------------------------------QRSVVSWNSILAGYVSCGDFDGARRVFDE 205
+RS ++L YV G+ A +VF+
Sbjct: 394 KPNHFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEI 453
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX-XXXXGDLKL 264
+ +++++W+ M+AG AQ G ++A LF ++ + ++ +
Sbjct: 454 IEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQ 513
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNAL------IHMYASCGVIGDAYQVFTKMPQRSTV 318
G+ H Y + +RLNNAL + MYA G I A++VF + +R V
Sbjct: 514 GKQFHAYAIK-----------MRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLV 562
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW SMI +++ G K+AL +F M VD A+T I V+ AC HAG V++G++
Sbjct: 563 SWNSMISGYSQHGQAKKALEVFDEMQKRNMDVD-----AVTFIGVITACTHAGLVEKGQK 617
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM I+P ++HY CM+DL SRAG L++A G+I MP P +W LLG ++H
Sbjct: 618 YFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVH 677
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
+N EL + KL++ D AA VLLSN+YA A WQ+ VR+ M + VKK PG
Sbjct: 678 RNVELGELAAEKLISLQPEDSAA--YVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGY 735
Query: 499 SWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
SWI++ + F+AGD+TH S IY LSE+ + Y+PD F
Sbjct: 736 SWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVF 784
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 162/377 (42%), Gaps = 56/377 (14%)
Query: 67 AHKLFSTIDNPSTTVWNH--IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
AH LF I + TT+ H ++ Y+R +++ + ++ + +P+ T S + + C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
+ G QVH + G +V V T+L++ Y V R VFD MG+R+VVSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 185 SILAGYVSCGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
S+LAGY G + +F +M P R VS T+IA +G
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVS--TVIAALVNEGV------------ 209
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ +G +H +V ++ + ++ + N+LI +Y+
Sbjct: 210 -----------------------VGIGLQVH-----AMVVKHGFEEAIPVFNSLISLYSR 241
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
G++ DA VF KM R V+W SMI + + G E +F M + GV+P +
Sbjct: 242 LGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM-----QLAGVKPTHM 296
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
T V+ +C + + + ++ + +I MV LS+ +D+A L
Sbjct: 297 TFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV-ALSKCKEMDDALSLFSL 355
Query: 419 MPLKPNDALWGALLGGC 435
M N W A++ GC
Sbjct: 356 MEEGKNVVSWTAMISGC 372
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 180/424 (42%), Gaps = 52/424 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H Q V GL ++ T L+ Y+ ++ + ++F + + W ++ GY+ +
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
E + QM PN +T S +++A V G++ G QVH +V+ G+
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGF-------- 225
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
E+A VF NS+++ Y G AR VFD+M IR+ V+
Sbjct: 226 ------------EEAIPVF-----------NSLISLYSRLGMLRDARDVFDKMEIRDWVT 262
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W +MIAG + G+ + +F +M+ A V+ +L L + +
Sbjct: 263 WNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKAL 322
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGL 332
+ +Q + AL+ + C + DA +F+ M + ++ VSWT+MI + G
Sbjct: 323 KSGFTTDQI-----VITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGG 377
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE--GRRIFASMNRTWGIS 390
+A+ LF M +GV+P+ T +L + FV E I + R+ +
Sbjct: 378 NDQAVNLFSQMRR-----EGVKPNHFTYSAIL-TVHYPVFVSEMHAEVIKTNYERSSSVG 431
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
++D + G +A + E + K A W A+L G +E A+ + +
Sbjct: 432 T------ALLDAYVKLGNTIDAVKVFEIIEAKDLMA-WSAMLAGYAQTGETEEAAKLFHQ 484
Query: 451 LVAE 454
L+ E
Sbjct: 485 LIKE 488
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/528 (29%), Positives = 255/528 (48%), Gaps = 51/528 (9%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
SG++ Q V ++ + NL+ ++H+ + +G+ +I L+ Y +++
Sbjct: 346 SGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKY 405
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
F + W II GYA++ ++ R++ + + + +L AC
Sbjct: 406 MGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC-- 463
Query: 127 GGLLREG--EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
GL E +++HG VL KG +++ ++ ++N Y V+ ARH
Sbjct: 464 SGLKSEKLIKEIHGYVL-KGGLADILIQNAIVNVYGELALVDYARH-------------- 508
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
VF+ + +++VSWT+MI C G +AL LF + +E
Sbjct: 509 -----------------VFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEP 551
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
LK G+ IH ++ R + N+L+ MYA CG + +
Sbjct: 552 DLITLVSVLYAAAALSSLKKGKEIHGFL-----IRKGFFLEGLIANSLVDMYARCGTMEN 606
Query: 305 AYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVL 364
A +F + QR + WTSMI A G GK+A+ LF M + V PD IT + +L
Sbjct: 607 ARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDEN-----VLPDHITFLALL 661
Query: 365 CACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
AC H+G V EG++ F M + + P EHY C+VDLL+R+ L+EA+ + NMP++P+
Sbjct: 662 YACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPS 721
Query: 425 DALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVR 484
+W ALLG C+IH N++L V KL+ +L+T+ + Y VL+SN +A RW DV VR
Sbjct: 722 AEVWCALLGACRIHSNNDLGEVAAKKLL-QLNTENSGNY-VLVSNTFAADGRWNDVEEVR 779
Query: 485 QKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
M +KK PG SWI++ +H F+A D +H IY L++ K
Sbjct: 780 SIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTK 827
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 180/434 (41%), Gaps = 49/434 (11%)
Query: 7 VPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVV-LNGLSQKTNIITKLLSFYIASD 62
+P + R +QQ L+ C + + L Q +H+ + + TK + Y
Sbjct: 37 LPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCG 96
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
A K+F + + WN +I + +++E Y++M + FT+ +L
Sbjct: 97 SFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLK 156
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC R G ++HG+ + GY VFV
Sbjct: 157 ACGAFKERRLGCEIHGVAVKCGYGGFVFV------------------------------- 185
Query: 183 WNSILAGYVSCGDFDGARRVFDE--MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
N+++A Y CGD GAR +FD M + VSW ++I+ +G +ALSLF M+
Sbjct: 186 CNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEV 245
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
VE +K+GR IH ++ ++ V ++NALI MYA+CG
Sbjct: 246 GVESNTYTFVSALQACEGPTFIKIGRGIH-----AVILKSNHFTDVYVSNALIAMYANCG 300
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
+ DA +VF M + VSW +++ + + +A+ F+ M G +PD +++
Sbjct: 301 QMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ-----KPDQVSV 355
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+ ++ A + + G + A + GI + ++D+ + + E MP
Sbjct: 356 LNMIAASGRSANLLAGMEVHAYAIKH-GIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 421 LKPNDALWGALLGG 434
K + W ++ G
Sbjct: 415 EK-DLISWTTIIAG 427
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 41/335 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST--IDNPSTTVWNHIIRGYAR 91
+IH V G + L++ Y L A LF + ++ WN II +
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228
Query: 92 SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+++ +R+M E N +T+ L AC ++ G +H ++L + ++V+V
Sbjct: 229 EGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYV 288
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV 211
N+++A Y +CG + A RVF M ++
Sbjct: 289 S-------------------------------NALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
VSW T+++G Q A++ F +M+ + + +L G +H Y
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+ + N + + N+LI MY C + F MP++ +SWT++I +A+
Sbjct: 378 AIKHGIDSN-----MHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNE 432
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+AL L + + + VD P I I++ C+
Sbjct: 433 CHLDALNLLRKVQLEKMDVD---PMMIGSILLACS 464
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 253/472 (53%), Gaps = 23/472 (4%)
Query: 38 QVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN-PSTTVWNHIIRGYARSHTPW 96
++LN S + + +L S I S H + +N S ++N++IR Y+ S P
Sbjct: 38 SLLLNNPSPHYHFLQQLHSQIITSSLFHH----YPFHNNLTSLLLFNNLIRSYSLSLFPH 93
Query: 97 KSVECYRQMVSTEAEP---NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+S++ + ++ + FT +FL AC G +H IV G+ ++VFV+T
Sbjct: 94 ESLKFFTHTLNNLTHSLSLDSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQT 153
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ Y+ G + A VF M R+ V+WN ++G + G + AR VFD M +R+VVS
Sbjct: 154 GLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVS 213
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
WT +I G + + +AL+LF +M +E G++K+ +H YV
Sbjct: 214 WTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYV 273
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP--QRSTVSWTSMIMAFAKQ 330
++ R +R+ NALI +YA CG I A +F++MP +R++VSW S++ +A
Sbjct: 274 EK----RGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATF 329
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G+ +EA+ F+ M GVRP+ + + +L AC H+G V+EG F M +G+
Sbjct: 330 GMVREAVDTFEKMEK-----AGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLV 384
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK-PNDALWGALLGGCQIHKNSELASVVEP 449
P I+HYGC++D+L RAG L EA + +P + ND +W LLG C +H N E+ V
Sbjct: 385 PDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTK 444
Query: 450 KLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
K++ E++ G G VL+SNI+A R++DV +R+ + + V K PG S +
Sbjct: 445 KIL-EME-KGHGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/508 (31%), Positives = 250/508 (49%), Gaps = 43/508 (8%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+HS + NGL ++ L++ Y L A + F + ++ W+ ++ GYA+
Sbjct: 240 QVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGG 299
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K+++ + +M S+ P+ FT +++AC + EG+Q+H G+ ++V +
Sbjct: 300 DSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLS 359
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+++ YA CG AR+ F+ + +VV
Sbjct: 360 AVVDMYA-------------------------------KCGSLADARKGFECVQQPDVVL 388
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT++I G Q G + L+L+G+M+ RV L G+ +H
Sbjct: 389 WTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMH---- 444
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
RI+ + + V + +AL MY CG + D Y +F +MP R +SW +MI ++ G G
Sbjct: 445 ARII-KYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHG 503
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+AL LF+ M+ ++G++PD +T + +L AC H G VD G F M + I+P +
Sbjct: 504 NKALELFEKML-----LEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMV 558
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY CMVD+LSRAG L+EA IE+ + LW LLG C+ H+N EL KLV
Sbjct: 559 EHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV- 617
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
EL + ++ Y VLLS+IY ++V VR+ M GV K PG SWI++ G+VH FV G
Sbjct: 618 ELGSPESSAY-VLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVG 676
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEP 541
D H I L + K + Y+P
Sbjct: 677 DNQHPQVDEIRLELELLTKLMIDEGYQP 704
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 199/443 (44%), Gaps = 57/443 (12%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSF 57
M + + P R+ +Q L C + +N+++ +H++++ G + L+
Sbjct: 1 MSLPKIFPPQHRQLLQD-----LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNL 55
Query: 58 YIASDQLQHAHKLFSTI-DNPSTTV-WNHIIRGYARSHTPWK---SVECYRQMV-STEAE 111
Y ++ L HA LF +I DN V WN +I ++++H+ ++ +R+M+ +
Sbjct: 56 YAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVI 115
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN T + + SA + G+Q H + + G +V+V ++L+N Y G V
Sbjct: 116 PNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTG------FV 169
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
FD AR++FD MP RN VSW TMI+G A +A+
Sbjct: 170 FD-------------------------ARKLFDRMPERNTVSWATMISGYASSDIADKAV 204
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+F MRR + GR +H + +N V + NA
Sbjct: 205 EVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVH-----SLAIKNGLLAIVSVANA 259
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
L+ MYA CG + DA + F +++++W++M+ +A+ G +AL LF M S
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHS-----S 314
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
GV P TL+ V+ AC V EG+++ S G ++ +VD+ ++ G L +
Sbjct: 315 GVLPSEFTLVGVINACSDLCAVVEGKQMH-SFAFKLGFGLQLYVLSAVVDMYAKCGSLAD 373
Query: 412 AHGLIENMPLKPNDALWGALLGG 434
A E + +P+ LW +++ G
Sbjct: 374 ARKGFECVQ-QPDVVLWTSIITG 395
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 252 bits (644), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/471 (30%), Positives = 236/471 (50%), Gaps = 46/471 (9%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
++IH++++ +G I LL FY++S+ + A ++F +I +P W +I G ++
Sbjct: 78 LEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKC 137
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+++E + S +PN T +SAC G ++ G+ +H L ++ ++
Sbjct: 138 GFETEAIEAFS---SINVKPNALTLVSAISACSSIGAIKFGKAIHAYGL-----KSLMID 189
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
N++ FY N+ L Y CG F AR VF +M R+V+
Sbjct: 190 GNIV-FY------------------------NAALDLYAKCGFFSNARNVFVKMSKRDVI 224
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
SWTT++ A+ G+C +A+ +F +M E G L LG W+H Y
Sbjct: 225 SWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDY 284
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+++RI + NAL++MY CG + +VF + + +SW ++I A G
Sbjct: 285 IEKRI----DLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNG 340
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
GK+ + +F M+ V GV PD +T I +L AC H G V EG F +M ++GI P
Sbjct: 341 YGKQVVQMFSHML-----VHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVP 395
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
++ HYGCMVD+ RA +EA ++ MP++ +W ALL C+ H N E++ + ++
Sbjct: 396 QMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQI 455
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
D + G L LLSNIYA ++RW D VR+ M G+KK G SW++
Sbjct: 456 ---HDKNVGVGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVE 503
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 263/532 (49%), Gaps = 59/532 (11%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
R S + FT LL+SC + Q+HS ++ G + L++ Y +
Sbjct: 52 RSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPC 111
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A K+F T +N +I GY + ++++ +R+M+ E F S + V
Sbjct: 112 LARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRML---CENRFFVNSVTMLGLV 168
Query: 126 RGGL----LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
G L LR G +HG G+ +++ V
Sbjct: 169 SGILVPEKLRLGFCLHGCCFKFGFENDLSV------------------------------ 198
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR-A 240
NS L YV CG+ + R+VFDE+ ++++++W MI+G AQ G ++ L ++ EMR+
Sbjct: 199 -GNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVG 257
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
V G +GR + ++ + R + + L NALI+MYA CG
Sbjct: 258 GVNPDPVTLLGVLCSCANLGAQGIGREV-----EKEIDRFGFRSNSFLMNALINMYARCG 312
Query: 301 VIGDAYQVFTKMPQRS--TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
+ A +VF M +RS VSWT++I + G G+ A+ LF MV G V+PD
Sbjct: 313 NLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSG-----VKPDRT 367
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
+ VL AC HAG ++G F M R +G+ P EHY C+VDLL R+G L EA LI+
Sbjct: 368 VFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDL 427
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
M +KP+ +WGALLG C+IH+N ELA V ++ T+ GY VLLSN+Y+ K +
Sbjct: 428 MKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIELEPTN--IGYYVLLSNLYSDTKNLE 485
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
V+ VR M + ++K PG S+++ G +H F +GD +H S IY +L+E+
Sbjct: 486 GVLKVRVMMRDRNLRKDPGCSYVEYKGKMHLFYSGDTSHPQSKEIYRMLNEL 537
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 160/375 (42%), Gaps = 52/375 (13%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
NP TT WN +R ++ +++ YR M+ + PN FT+ LL +C L G Q
Sbjct: 22 NP-TTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQ 80
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H +L G + + ++LIN Y+ AR VFD +S+N++++GY +
Sbjct: 81 LHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMM 140
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
A ++F M N V+ +++G + + L G + E
Sbjct: 141 IVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFE------- 193
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
DL +G N+ + MY CG + +VF
Sbjct: 194 ---------NDLSVG------------------------NSFLTMYVKCGEVEYGRKVFD 220
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
++ + ++W +MI +A+ G + L +++ M V GV PD +TL+ VLC+C +
Sbjct: 221 EILVKDLITWNAMISGYAQNGHARRVLEIYREM----RKVGGVNPDPVTLLGVLCSCANL 276
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WG 429
G GR + ++R +G ++++ +R G L A + + M + + W
Sbjct: 277 GAQGIGREVEKEIDR-FGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWT 335
Query: 430 ALLGGCQIHKNSELA 444
A++GG IH E A
Sbjct: 336 AIIGGYGIHGEGETA 350
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 251 bits (640), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 239/477 (50%), Gaps = 52/477 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLL 121
++ +A LF + + W+ +I GY + M E N T + ++
Sbjct: 205 RIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMI 264
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
C G ++EG Q+HG+V G+ + +I Y+ G + A+ VF GMG + +V
Sbjct: 265 KGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLV 324
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+WNS+++GY+ + D A VF+ MP ++++SWT MI G A GR +A+ LF ++
Sbjct: 325 TWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEK- 383
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS---------------- 285
+ + +HW+V+ ++R Q +P+
Sbjct: 384 -----DDFVWTVLISGFVSNEEYEEALHWFVR---MSREQCRPNPLTISSVLSASASLVA 435
Query: 286 -------------------VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+ + N+LI YA CG + DAY++F + + + VS+ S+I
Sbjct: 436 LNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVING 495
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
FA+ G G+EAL ++K M + + + P+ +T + VL AC HAG ++EG +F +M
Sbjct: 496 FAQNGFGEEALSMYKRMQN-----ESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSR 550
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+GI P +HY CMVDLL RAG LDEA + +MPL+P+ +WGALL H+ +LA +
Sbjct: 551 YGIEPEADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKL 610
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
+ + EL+ A Y+VL + A ++++ + + K ++ G+KK PG SWI I
Sbjct: 611 A-AQHITELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLK-GIKKSPGCSWITI 665
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 221/539 (41%), Gaps = 130/539 (24%)
Query: 13 RSIQQHVFTLLQSCNNI------------------QNLIQIHSQVVLNGLSQKTNIIT-- 52
R+IQQ + L Q+ NI +N ++ + N +SQK NI+T
Sbjct: 7 RNIQQRIINLTQNQTNIAKGSKFITECNVKISENGRNGNVNAAETIFNRMSQK-NIVTWT 65
Query: 53 KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP 112
+L+ Y + Q+ A KLF + +T +N +I GY R+ +V ++ ++ +
Sbjct: 66 AMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGC---NVTKAYELFTSFHDR 122
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIV---LVKGYCSNVFVETNLINFYAGRGGVEQAR 169
N +Y+ ++ V+ E+++ CSN LIN Y G + +A
Sbjct: 123 NEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVCSNA-----LINGYLKIGEMNEAL 177
Query: 170 HVFDGMG--QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
VF+ +G +R VVSW++++ G G D AR +FD MP RNVVSW+ MI G +KG
Sbjct: 178 RVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLF 237
Query: 228 KQALSLFGEMRR-ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
+ LF +MRR VE G +K G IH +V+R +
Sbjct: 238 ENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIH-----GLVSRLGFEFGS 292
Query: 287 RLNNALIHMYASCGV-------------------------------IGDAYQVFTKMPQR 315
L+N +I MY+ G + AY+VF +MP++
Sbjct: 293 VLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEK 352
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV------------------------- 350
+SWT+MI FA G +A+ LF T+ V
Sbjct: 353 DLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMS 412
Query: 351 -DGVRPDAITLIVVLCACCHAGFVDEGRRIFA---SMNRTWGIS---------------- 390
+ RP+ +T+ VL A ++EG +I + MN + +S
Sbjct: 413 REQCRPNPLTISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVT 472
Query: 391 -----------PRIEHYGCMVDLLSRAGFLDEAHGL---IENMPLKPNDALWGALLGGC 435
P + Y +++ ++ GF +EA + ++N L+PN + A+L C
Sbjct: 473 DAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSAC 531
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T ++ + ++ A +LF T+ VW +I G+ + +++ + +M +
Sbjct: 358 TAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCR 417
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
PN T S +LSA L EG Q+H VL ++ ++ +LI+FYA G V A +
Sbjct: 418 PNPLTISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKI 477
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGA----RRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
F + + +VVS+NS++ G+ G + A +R+ +E N V++ +++ C G
Sbjct: 478 FVDVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLI 537
Query: 228 KQALSLFGEMR 238
++ +LF M+
Sbjct: 538 EEGWNLFNTMK 548
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+QIHS V+ L +I L+SFY + A+K+F + P+ +N +I G+A++
Sbjct: 440 LQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQN 499
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+++ Y++M + EPN T+ +LSAC GL+ EG
Sbjct: 500 GFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEG 540
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 248/496 (50%), Gaps = 55/496 (11%)
Query: 15 IQQHVFTL---LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
+Q + FTL +++C+ + ++ HS V+ G T + L+ Y + + A
Sbjct: 150 VQPNAFTLSSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDAR 209
Query: 69 KLFSTI-DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVR 126
++F + W II + R+ +S++ + M P+G+T+ +L+AC
Sbjct: 210 RVFDELFVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACAN 269
Query: 127 GGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
GLLR+G++VHG V+ G+ NV VE++L++ Y G V +R VF+
Sbjct: 270 LGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFE------------- 316
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
R+ DE +N VSWT M+ Q + L L R R +
Sbjct: 317 --------------RLSDE---KNNVSWTAMLGVYCQNKEYQNVLDLV----RERGDLNF 355
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
+ G+ +H + R V + +AL+ +YA CG++ A
Sbjct: 356 YAFGIVLRACSGLAAVNHGKEVHC-----MYVRKGGSKDVIIESALVDLYAKCGMVDFAC 410
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
+F M R+ ++W SM+ FA+ G G EAL LF+ M+ +G ++PD+IT + VL A
Sbjct: 411 TMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEG-----IKPDSITFVAVLFA 465
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C HAG VDEGR++F M +GI P +EHY CM+DLL RAGF+DEA L+EN + + +
Sbjct: 466 CSHAGLVDEGRKVFTLMGE-YGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKS 524
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
LW ALLG C + A V K++ EL+ D Y VLL+NIY RW D + +R+
Sbjct: 525 LWAALLGACTKCSDYRTAERVARKMI-ELEPDFHLSY-VLLNNIYREVGRWDDALEIRKL 582
Query: 487 MIEMGVKKPPGQSWIQ 502
M + GVKK G+SWI
Sbjct: 583 MEDRGVKKMAGKSWID 598
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 181/429 (42%), Gaps = 68/429 (15%)
Query: 21 TLLQS---CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASD---QLQHAHKLFSTI 74
+LLQ+ N+ + +H+ V+ +GL + LL+ Y + L HA LF ++
Sbjct: 55 SLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSL 114
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
W +I GY RS P +S+ + +M++ +PN FT S ++ AC + G
Sbjct: 115 HVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGR 174
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSC 193
H +VL +G+ N V +LI+ Y V+ AR VFD + + V W SI++ +
Sbjct: 175 CFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTRN 234
Query: 194 GDFDGARRVFDEMP-IRNVV----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
F + + F M +R VV ++ T++ CA G +Q
Sbjct: 235 DMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQ------------------- 275
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
G+ +H V N V + ++L+ MY CG + + V
Sbjct: 276 ----------------GKEVHGKVVGLGFGGN-----VVVESSLLDMYGKCGCVRHSRIV 314
Query: 309 FTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA--ITLIVVLC 365
F ++ +++ VSWT+M+ + + + L L + R D +VL
Sbjct: 315 FERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRE-----------RGDLNFYAFGIVLR 363
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC V+ G+ + R G S + +VDL ++ G +D A + +M ++ N
Sbjct: 364 ACSGLAAVNHGKEVHCMYVRKGG-SKDVIIESALVDLYAKCGMVDFACTMFASMEVR-NL 421
Query: 426 ALWGALLGG 434
W +++ G
Sbjct: 422 ITWNSMVSG 430
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/539 (32%), Positives = 251/539 (46%), Gaps = 118/539 (21%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY-----RQMVSTEAEPNGF--- 115
++ KLF + WN +I GYA++ +++E + R +VS A NGF
Sbjct: 45 VEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLN 104
Query: 116 -------------------TYSFLLSACVRGGLL-----------REGEQVHGIV----- 140
+ S L+S VR G L EG++ +V
Sbjct: 105 GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNT 164
Query: 141 LVKGYCSNVFVET------------------------NLINF------YAGRGGVEQARH 170
L+ GY VE N++++ Y G V AR
Sbjct: 165 LIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARE 224
Query: 171 VFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ- 229
+FD M +R SWN+++ GYV GD + A ++F EMPI +V+SW ++I+G +Q G K+
Sbjct: 225 LFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRV 284
Query: 230 ------------------------------ALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
A+ LF +M+
Sbjct: 285 KEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGL 344
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QRSTV 318
DL LG+ IH +V + +V P + +NN+LI MY+ CG IGDA VF +M + +
Sbjct: 345 VDLYLGKQIHQFVTKTVV------PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVI 398
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W +MI +A G +AL LF+ M G+ ++P IT I VL AC HAG V+EG+R
Sbjct: 399 TWNAMIGGYAFHGFAAQALELFERM----KGLK-IQPTYITFISVLNACAHAGLVEEGKR 453
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F SM +GI PR+EH+ +VD+L R G L EA LI NMP+KP+ A+WGALLG C++H
Sbjct: 454 QFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVH 513
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
N +LA V L+ L+ + +A Y LL N+YA +W D VR M E VKK G
Sbjct: 514 SNVDLAQVAAKALI-RLEPESSAPY-ALLFNLYADLGQWDDAERVRALMEENNVKKQAG 570
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 174/463 (37%), Gaps = 131/463 (28%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY--------------------ARSH 93
+++ Y+ ++ A +LF + WN II GY R
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 94 TPWKSV--------------ECY-----RQMVSTEAEPNGF------------------- 115
W +V E + R +VS A NGF
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 120
Query: 116 ---TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN--VFVETNLINFYAGRGGVEQARH 170
+ S L+S VR G L ++ +G + V+ LI Y RG VE+ARH
Sbjct: 121 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 180
Query: 171 VFDGMG-------------QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
VFDG+ +R+VVSWNS++ YV GD AR +FD M R+ SW T+
Sbjct: 181 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTV 240
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I G Q G ++A LF EM
Sbjct: 241 IGGYVQIGDMEEASKLFLEM---------------------------------------- 260
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
P V N++I ++ G + + F MP ++ +SW S+I + K K A+
Sbjct: 261 ----PIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAI 316
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD--EGRRIFASMNRTWGISPRIEH 395
LF M + G RPD TL +L G VD G++I + +T + P +
Sbjct: 317 ELFSQM-----QLKGERPDRHTLSSILSVS--TGLVDLYLGKQIHQFVTKT--VVPDLPI 367
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++ + SR G + +A + M L + W A++GG H
Sbjct: 368 NNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFH 410
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 134/337 (39%), Gaps = 63/337 (18%)
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD---FDGARRVFDEMPIRNV 211
+I Y R + +AR +FD M R +VSWN I++GY SC + R++FD MP R+
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 212 VSWTTMIAGCAQKGRCKQALSLFGEMRRARV---------------------------EX 244
VSW T+I+G A+ GR QA+ +F M V E
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 120
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
G L + I + + +++ V N LI Y G++ +
Sbjct: 121 DSASLSGLVSGLVRNGKLDMAAEI---LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEE 177
Query: 305 AYQVF-------------TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
A VF + +R+ VSW SM+M + K G A LF M
Sbjct: 178 ARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-------- 229
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
V DA + V+ G ++E ++F M P + + ++ S+ G L
Sbjct: 230 -VERDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKR 283
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
ENMP K N W +++ G + KN + +E
Sbjct: 284 VKEFFENMPHK-NLISWNSVIAGYE--KNEDYKGAIE 317
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 242/525 (46%), Gaps = 46/525 (8%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
VF+ S ++ Q+H V GL + L Y L A F I NP
Sbjct: 274 VFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPD 333
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN II +A + ++++ +RQM+ P+ TY LL C L +G Q+H
Sbjct: 334 IVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHS 393
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
++ G+ + + NS+L Y C
Sbjct: 394 YIVKIGF-------------------------------DKEITVCNSLLTMYTKCSHLHD 422
Query: 199 ARRVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A VF ++ N+VSW +++ C QK + + L+ EM + +
Sbjct: 423 ALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCA 482
Query: 258 XXGDLKLGRWIHWY-VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
L +G +H Y ++ ++ V + N LI MYA CG + A VF
Sbjct: 483 ELTSLGVGNQVHCYSIKSGLIL------DVSVCNGLIDMYAKCGSLKHARDVFDSTQNLD 536
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VSW+S+I+ +A+ GLG EAL LF+ M + G V+P+ +T + L AC H G V+EG
Sbjct: 537 IVSWSSLIVGYAQCGLGHEALNLFRIMTNLG-----VQPNEVTYLGALSACSHIGLVEEG 591
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
R++ SM GI P EH+ C+VDLL+RAG L EA I+ L + W LL C+
Sbjct: 592 WRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACK 651
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
H N ++A ++ +LD +A +V+L NI+A A W++V +R+ M +MGV+K P
Sbjct: 652 THNNVDIAERGAGNIL-KLDPSNSAA-MVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVP 709
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
GQSWI++ H F + D +H IY +L E+ Q D Y+P
Sbjct: 710 GQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 754
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 46/419 (10%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L+ +C N ++L +IH V+ + + +++ Y ++ A K+F T+ P
Sbjct: 70 SLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLP 129
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W +I GY+++ ++ Y QM + P+ T+ ++ AC G + G Q+H
Sbjct: 130 NVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLH 189
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
HV + S N++++ Y + G +
Sbjct: 190 A-------------------------------HVIKSWFGHHLTSQNALISMYTNFGQIE 218
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVEXXXXXXXXXXXXX 256
A VF +P ++++SW TMI G Q G +AL LF ++ R+ +
Sbjct: 219 HASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC 278
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
+L+ G+ +H + + RN V +L MYA G + A F ++
Sbjct: 279 SSLLELEYGKQVHGMCVKFGLRRN-----VFAGCSLCDMYAKFGFLPSAKMAFCQIKNPD 333
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VSW ++I AFA G EA+ F+ M+ G+ PD+IT I +LC C +++G
Sbjct: 334 IVSWNAIIAAFADNGDANEAIDFFRQMIH-----IGLTPDSITYISLLCTCGSPVRLNQG 388
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
R+I + + + G I ++ + ++ L +A + ++ N W A+L C
Sbjct: 389 RQIHSYIVKI-GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 446
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 254/538 (47%), Gaps = 64/538 (11%)
Query: 19 VFTLLQSCNNIQNLI---QIHS---QVVLNGLSQKTN----IITKLLSFYIASDQLQHAH 68
+ +LL +C ++ L+ + H + +L G N +I L+ Y L+ A
Sbjct: 89 LMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDLAVINALIDMYAKCKSLEVAR 148
Query: 69 KLFSTI--DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE--AEPNGFTYSFLLSAC 124
+F I + W +I GYA+ +++ + +M + PN FT S +L +C
Sbjct: 149 AMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMSC 208
Query: 125 VRGGLLREGEQVHGIVLVKG--YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
R L G+ +H VL + Y +FV LI+ Y+ G V+ A+ VFD M +R+ +S
Sbjct: 209 ARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAIS 268
Query: 183 WNSILAGYVSCGDFDGARRVFDEM-----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
W S+L GY G + A RVFDEM N SW + G A AL LF EM
Sbjct: 269 WTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXGDAN-----HALQLFSEM 323
Query: 238 RRAR--VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
+ + LK G+ IH +V +R + + + N LI M
Sbjct: 324 FKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRR---SHSNSDVLFVANCLIDM 380
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ G + A VF M +R+ VSWTS++ + G ++A +F M + +DG
Sbjct: 381 YSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDG--- 437
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
IT +VVL AC +HY CMVDLL RAG L EA L
Sbjct: 438 --ITFLVVLYAC--------------------------KHYACMVDLLGRAGRLGEAMRL 469
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
I +MP++P +W ALL C+IH N ELA KL+ EL D Y LLSNIYA A+
Sbjct: 470 INDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLL-ELKADNDGTY-TLLSNIYANAR 527
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
RW+DV + M G+KK PG SW++ + F GD TH S IYE L+++IK+
Sbjct: 528 RWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKR 585
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 186/445 (41%), Gaps = 74/445 (16%)
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
D L K+ I W+ +I GYA+ ++++ +R+M PN LL
Sbjct: 34 DALSLFGKMREEIIELDVVTWSSVISGYAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLL 93
Query: 122 SACVRGGLLREGEQVHGI---VLVKGY----CSNVFVETNLINFYAGRGGVEQARHVFDG 174
SAC G L G++ H ++KG ++ V LI+ YA +E AR +FD
Sbjct: 94 SACASVGALLHGKETHCYSVKFILKGEHNDDNDDLAVINALIDMYAKCKSLEVARAMFDE 153
Query: 175 M--GQRSVVSWNSILAGYVSCGDFDGARRVFDEM-PIRNVVSWTTMIAGCAQKGRCKQAL 231
+ R VV+W ++ GY GD + A ++F EM N + C
Sbjct: 154 ICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVL-------- 205
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
M AR+ L G+ IH YV +R + + + + N
Sbjct: 206 -----MSCARLSA-----------------LIFGKHIHAYVLRRSLIYSD---VLFVANC 240
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM----VSDG 347
LI MY+ G + A VF M +R+ +SWTS++ + G ++A +F M +S G
Sbjct: 241 LIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFG 300
Query: 348 AG-----------------------VDG-VRPDAITLIVVLCACCHAGFVDEGRRIFAS- 382
G +D + P+ T+ VL +C + G++I A
Sbjct: 301 NGGSWNRFVXGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHV 360
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSE 442
+ R+ S + C++D+ S++G +D A + ++M K N W +LL G +H SE
Sbjct: 361 LRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSE 419
Query: 443 LASVVEPKLVAE-LDTDGAAGYLVL 466
A V ++ E L DG +VL
Sbjct: 420 DAFRVFDEMRKEALVLDGITFLVVL 444
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 147/307 (47%), Gaps = 13/307 (4%)
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF----DEMPIRNVVSWTTMIAG 220
+E A V++ M + VV+WN+++ GY G F+ A +F +E+ +VV+W+++I+G
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISG 60
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA-- 278
AQ+G +A+ +F +M R G L G+ H Y + I+
Sbjct: 61 YAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGE 120
Query: 279 RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM--PQRSTVSWTSMIMAFAKQGLGKEA 336
N + + NALI MYA C + A +F ++ R V+WT MI +A+ G A
Sbjct: 121 HNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 180
Query: 337 LGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS-MNRTWGISPRIEH 395
L LF M + + P+ T+ VL +C + G+ I A + R+ S +
Sbjct: 181 LQLFSEMFKFD---NCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFV 237
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAEL 455
C++D+ S++G +D A + ++M K N W +LL G +H SE A V ++ E
Sbjct: 238 ANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEA 296
Query: 456 DTDGAAG 462
+ G G
Sbjct: 297 LSFGNGG 303
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 170/585 (29%), Positives = 274/585 (46%), Gaps = 85/585 (14%)
Query: 5 RFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + G R + ++ ++C I L +H V+ G+ ++ L+ Y
Sbjct: 192 RSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQC 251
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL 121
L A +LF ID+ ST+ W +I Y ++ ++++ + +M +E EPN T +L
Sbjct: 252 GYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVL 311
Query: 122 SACVRGGLLREGEQVH---------------GIVLVKGYCS-----------------NV 149
++C R G L+EG+ VH G L+ Y + N+
Sbjct: 312 NSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENI 371
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVS--------------------------- 182
LI+FYA G ++A F M + ++
Sbjct: 372 VSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGH 431
Query: 183 -----------WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
NS++ Y CG A +F+++ +++V+W MI G +Q G +AL
Sbjct: 432 VMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEAL 491
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
SLF EM + R+E G L G+WIH + IV NQ + ++ A
Sbjct: 492 SLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIH---HKIIVTGNQND--LYIDTA 546
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
L+ MYA CG + A +VF + ++S VSW++MI A G A LF MV +
Sbjct: 547 LVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMV-----LS 601
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
++P+ +T + +L AC HAG V EG+ F +M +GI P +EH+ +VDLLSRAG ++
Sbjct: 602 NIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDING 661
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
A+ +I+++ ++WGALL GC+I+ ++ + +L + TD GY LLSNIY
Sbjct: 662 AYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEEL-GGISTDD-TGYYTLLSNIY 719
Query: 472 AFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMT 516
A W + VR KM MG+KK PG S ++I+ ++ F +GD +
Sbjct: 720 AEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTS 764
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 44/361 (12%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L ++C+ ++ L Q+H+ +V+ L TKLL Y LQ + +F T +P + +
Sbjct: 7 LFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFM 66
Query: 82 WNHIIRGYARSHTPWKSVECYR---QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
++ +I+ + +H + + + QM S + F Y ++ A G L G ++HG
Sbjct: 67 FSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHG 126
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+L G+C + + T+L+ Y + A+ VFD M R +V W+SI++ YV G +
Sbjct: 127 RILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYRE 186
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
+F M + + M+ A+ C +
Sbjct: 187 GLEMFRSMICEGIRPDSVMLLSVAEA--CGK----------------------------- 215
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
G L+L + +H YV R L+N+LI MY+ CG + A ++F + RST
Sbjct: 216 IGCLRLAKSVHGYVM-----REGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTS 270
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
WTSMI A+ + +EAL +F M V P+ +T+I VL +C G + EG+
Sbjct: 271 CWTSMISAYNQNECFEEALDVFIKMQD-----SEVEPNDVTMISVLNSCARLGRLKEGKS 325
Query: 379 I 379
+
Sbjct: 326 V 326
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 173/401 (43%), Gaps = 43/401 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H +++ +G + I T L+ Y L+ A K+F + +W+ II Y +
Sbjct: 123 KLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENG 182
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ +E +R M+ P+ + AC + G LR + VHG V+ +G
Sbjct: 183 VYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGM-------- 234
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
G G + NS++ Y CG A+R+F+ + R+
Sbjct: 235 ------VGDGSLS-----------------NSLIVMYSQCGYLCRAKRLFECIDDRSTSC 271
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT+MI+ Q ++AL +F +M+ + VE G LK G+ +H +V
Sbjct: 272 WTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVL 331
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + L ALI Y++C + ++ + + VSW ++I +A++GL
Sbjct: 332 RNAMG----VTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLN 387
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EA+ F MV+ G+ PD+ +L + A +G + G++I + + +
Sbjct: 388 DEAMAFFACMVA-----KGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFV 442
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ ++D+ S+ GF A+ + + K A W ++ G
Sbjct: 443 QN--SLMDMYSKCGFASSAYTIFNKIKHKSIVA-WNCMICG 480
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/535 (30%), Positives = 245/535 (45%), Gaps = 48/535 (8%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V + L SC+++ L QIH + GL ++ LL+ Y +D + K+F +
Sbjct: 443 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 502
Query: 76 NPSTTVWNHIIRGYARSHTP-WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
WN I A+ ++++ + +M+ PN T+ +L+A +L G
Sbjct: 503 EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGH 562
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
Q+H ++L + +E L+ FY +E +F M +R
Sbjct: 563 QIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSER---------------- 606
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
R+ VSW +MI+G G +A+ L M + +
Sbjct: 607 --------------RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLS 652
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L+ G +H R + V + +AL+ MYA CG I A + F MP
Sbjct: 653 ACASVATLERGMEVH-----ACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPV 707
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R+ SW SMI +A+ G G++AL +F M G PD +T + VL AC H G VD
Sbjct: 708 RNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQS-----PDHVTFVGVLSACSHVGLVD 762
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
EG + F SM +G+SPRIEH+ CMVDLL RAG + + I+ MP+ PN +W +LG
Sbjct: 763 EGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGA 822
Query: 435 C--QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
C +N+EL K++ EL+ A Y VLLSN++A W+DV+ R M + V
Sbjct: 823 CCRANGRNTELGQRA-AKMLIELEPQNAVNY-VLLSNMHAAGGNWEDVVEARLAMRKAAV 880
Query: 493 KKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
KK G SW+ + VH FVAGD TH IYE L E++ + Y P+ A
Sbjct: 881 KKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYAL 935
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 181/452 (40%), Gaps = 50/452 (11%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI- 59
+L F S R+ QQ T I+ +QIH+ + + L+S Y
Sbjct: 120 LLPNHFAVGSALRACQQCGST------GIKLGMQIHAFICKLPCVSDMILSNVLMSMYSD 173
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM----VSTEAEPNGF 115
S + AH++F I ++ WN II Y R + + + M V PN +
Sbjct: 174 CSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEY 233
Query: 116 TY-SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
T S + +AC G+VL++ + + L + Y G
Sbjct: 234 TLCSLVTAACSLADC--------GLVLLEQMLTRIEKSGFLRDLYVG------------- 272
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
++++ G+ G D A+ +F +M RN V+ ++ G A++ + ++A +F
Sbjct: 273 ---------SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVF 323
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
EM+ VE +LK G+ V + + + NAL++
Sbjct: 324 KEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVN 382
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY C I +A VF MP + TVSW SMI +EA+ F TM +G+
Sbjct: 383 MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKR-----NGMV 437
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
P ++I L +C G++ GR+I WG+ + ++ L + ++E
Sbjct: 438 PSNFSVISTLSSCSSLGWLTLGRQIHGE-GFKWGLDLDVSVSNALLTLYAETDSINECQK 496
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+ MP + + W + +G ++ S L ++
Sbjct: 497 VFFQMP-EYDQVSWNSFIGALAKYEASVLQAL 527
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/440 (22%), Positives = 189/440 (42%), Gaps = 60/440 (13%)
Query: 20 FTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
F ++ +++ + +H Q+ G + L++ Y+ L A KLF + +
Sbjct: 30 FDRYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNL 89
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL--LREGEQVH 137
W+ +I GY ++ P ++ ++ ++S+ PN F L AC + G ++ G Q+H
Sbjct: 90 VSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIH 149
Query: 138 GIVLVKGYCSNVFVETNLINFYAG-RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
+ S++ + L++ Y+ G ++ A VFD + R+ V+WNSI++ Y GD
Sbjct: 150 AFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDA 209
Query: 197 DGARRVFDEMPIR--------NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
A ++F M + N + +++ C L L +M R+E
Sbjct: 210 VSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADC--GLVLLEQM-LTRIE----- 261
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
K G YV +AL++ +A G++ A +
Sbjct: 262 --------------KSGFLRDLYV----------------GSALVNGFARYGLMDCAKMI 291
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F +M R+ V+ +++ A+Q G+EA +FK M D V ++ +L+V+L
Sbjct: 292 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM------KDLVEINSESLVVLLSTFT 345
Query: 369 HAGFVDEGRR----IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPN 424
+ EG+R + A + R+ + RI +V++ + +D A + + MP K +
Sbjct: 346 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK-D 404
Query: 425 DALWGALLGGCQIHKNSELA 444
W +++ G ++ E A
Sbjct: 405 TVSWNSMISGLDHNERFEEA 424
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 146/304 (48%), Gaps = 30/304 (9%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
N+++ YV G+ AR++FDEMP +N+VSW+ +I+G Q +A SLF + + +
Sbjct: 62 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLL 121
Query: 244 XXXXXXXXXXXXXXXXGD--LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC-G 300
G +KLG IH ++ + + + L+N L+ MY+ C G
Sbjct: 122 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSD-----MILSNVLMSMYSDCSG 176
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
I DA++VF ++ R++V+W S+I + ++G A LF M +G ++ +RP+ TL
Sbjct: 177 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELN-LRPNEYTL 235
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDL---------LSRAGFLDE 411
++ A C D G + M RIE G + DL +R G +D
Sbjct: 236 CSLVTAAC--SLADCGLVLLEQM------LTRIEKSGFLRDLYVGSALVNGFARYGLMDC 287
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV-EPKLVAELDTDGAAGYLVLLSNI 470
A + + M + + G ++G + H+ E A V E K + E++++ +VLLS
Sbjct: 288 AKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSE---SLVVLLSTF 344
Query: 471 YAFA 474
F+
Sbjct: 345 TEFS 348
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 251/503 (49%), Gaps = 50/503 (9%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+ +H + +G + ++ Y A +FS + W+ +I GY+++
Sbjct: 258 MAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQN 317
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+S E Y +MV+ N S +L A + L ++G+++H VL +G ++V V
Sbjct: 318 GMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVG 377
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR--- 209
+ L++ YA G +++A +F M ++ WNS++AGY GDF A F E+ +
Sbjct: 378 SALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHR 437
Query: 210 -NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
N ++ +++ C Q G +Q G+ I
Sbjct: 438 PNHITLVSVLPICTQIGALRQ-----------------------------------GKEI 462
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H Y + + N + + N+LI MY+ CG + +VF +M ++T+++ +MI A
Sbjct: 463 HCYATRSGLGLN-----ISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMISACG 517
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
GLG++ L ++ M G++P+ +T I +L AC HAG VD G ++ SM +G
Sbjct: 518 AHGLGEKGLKFYEQM-----NEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDYG 572
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
I P +EHY CMVDL+ R G LD A+ I MP+ P+ + G+LLG C++H ELA +
Sbjct: 573 IKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVLGSLLGACRLHNKVELADQLT 632
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
+ + +L+T+ +G+ VLLSN+YA KRW+D+ VR + + G++K PG SWIQ+ +
Sbjct: 633 AEHIFQLNTED-SGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSSWIQVGHSIF 691
Query: 509 DFVAGDMTHKHSYFIYEILSEII 531
F A + + I E L +
Sbjct: 692 VFHATSIFYPELAKIEETLDSLF 714
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 185/420 (44%), Gaps = 54/420 (12%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGL----SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+S N+ ++H+ ++++G S T + + L++ Y+ +A FS + + S
Sbjct: 41 LKSPPNLLQTKKLHALLLIHGFFHPSSPHTPLCSHLVNAYVNFGSHHYAFLFFSQLPHKS 100
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN I+R S+ S++ Y M+ P+ +TY +L AC + G V+
Sbjct: 101 NLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYPLVLKACSSLQAIEIGRWVYH 160
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+L+ +N+FV+ LI+ + V C +
Sbjct: 161 NILINEEKANLFVQCALIDMF-------------------------------VKCESLED 189
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
AR+VFDEM +R++ +WT +I G G +A+ LF R+ R+E
Sbjct: 190 ARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLF---RKMRLEGLKADSVIVASVLPV 246
Query: 259 XG----DLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G LKLG +H R+ + ++NA+I MY CG +A VF+ M
Sbjct: 247 CGRLMEGLKLGMAMH-----GCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVF 301
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R VSW+++I +++ G+ KE+ L+ MV+ G+ + I + VL A
Sbjct: 302 RDIVSWSTLIAGYSQNGMYKESFELYVRMVN-----MGLTTNEIVVSTVLPALGKLKLFK 356
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+G+ + + + G+ + +VD+ + G + EA + NM L + +W +L+ G
Sbjct: 357 QGKEMHNFVLKQ-GLLTDVVVGSALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAG 414
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 49/488 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+++ + +LF + + W +I G+ ++ +++ +R+M + + +T+ +L+
Sbjct: 224 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 283
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC L+EG+QVH ++ Y N+FV + L+ Y
Sbjct: 284 ACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYC---------------------- 321
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
C + A VF +M +NVVSWT M+ G Q G ++A+ F +M++ +
Sbjct: 322 ---------KCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASC 299
E L+ G H AR + ++NAL+ +Y C
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFH--------ARALTSGLISFITVSNALVTLYGKC 424
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I D++++F ++ + V+WT+++ +A+ G E +GLF++M++ G ++PD +T
Sbjct: 425 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG-----LKPDKVT 479
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC AG V++G +IF SM GI P +HY CM+DL SRAG ++EA I M
Sbjct: 480 FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 539
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P P+ W LL C+ + N ++ + + ELD A Y VLLS++YA +W++
Sbjct: 540 PFSPDAISWATLLSSCRFYGNMDIGKWA-AEFLMELDPHNTASY-VLLSSVYAAKGKWEE 597
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V +R+ M + G++K PG SWI+ VH F A D ++ S IY L ++ + + Y
Sbjct: 598 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGY 657
Query: 540 EPDITGAF 547
PD+
Sbjct: 658 VPDMNSVL 665
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 223/479 (46%), Gaps = 49/479 (10%)
Query: 17 QHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
H LL+ C N + +HS ++ +T ++ L+S Y + +A K+F
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQ 69
Query: 74 IDNPSTTVWNHIIRGYA-----------------RSHTPW--------------KSVECY 102
+ +P+ WN I+ Y+ R W +SV+ Y
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 103 RQMVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
M+ + N T+S LL + G ++ G Q+HG V+ G+ S VFV + L++ Y+
Sbjct: 130 NLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
G + AR VFD + +++VV +N+++ G + CG + ++R+F EM R+ +SWT+MI G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
Q G + A+ +F EM+ ++ L+ G+ +H Y + R
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY-----IIRT 304
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
+ ++ + +AL+ MY C I A VF KM ++ VSWT+M++ + + G +EA+ F
Sbjct: 305 DYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTF 364
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M G+ PD TL V+ +C + ++EG + F + T G+ I +V
Sbjct: 365 SDMQK-----YGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALV 418
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTD 458
L + G ++++H L + K ++ W AL+ G Q K +E + E L L D
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 49/488 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+++ + +LF + + W +I G+ ++ +++ +R+M + + +T+ +L+
Sbjct: 224 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 283
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC L+EG+QVH ++ Y N+FV + L+ Y
Sbjct: 284 ACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYC---------------------- 321
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
C + A VF +M +NVVSWT M+ G Q G ++A+ F +M++ +
Sbjct: 322 ---------KCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASC 299
E L+ G H AR + ++NAL+ +Y C
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFH--------ARALTSGLISFITVSNALVTLYGKC 424
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I D++++F ++ + V+WT+++ +A+ G E +GLF++M++ G ++PD +T
Sbjct: 425 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG-----LKPDKVT 479
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC AG V++G +IF SM GI P +HY CM+DL SRAG ++EA I M
Sbjct: 480 FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 539
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P P+ W LL C+ + N ++ + + ELD A Y VLLS++YA +W++
Sbjct: 540 PFSPDAISWATLLSSCRFYGNMDIGKWA-AEFLMELDPHNTASY-VLLSSVYAAKGKWEE 597
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V +R+ M + G++K PG SWI+ VH F A D ++ S IY L ++ + + Y
Sbjct: 598 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGY 657
Query: 540 EPDITGAF 547
PD+
Sbjct: 658 VPDMNSVL 665
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 223/479 (46%), Gaps = 49/479 (10%)
Query: 17 QHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
H LL+ C N + +HS ++ +T ++ L+S Y + +A K+F
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQ 69
Query: 74 IDNPSTTVWNHIIRGYA-----------------RSHTPW--------------KSVECY 102
+ +P+ WN I+ Y+ R W +SV+ Y
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 103 RQMVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
M+ + N T+S LL + G ++ G Q+HG V+ G+ S VFV + L++ Y+
Sbjct: 130 NLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
G + AR VFD + +++VV +N+++ G + CG + ++R+F EM R+ +SWT+MI G
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
Q G + A+ +F EM+ ++ L+ G+ +H Y + R
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAY-----IIRT 304
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
+ ++ + +AL+ MY C I A VF KM ++ VSWT+M++ + + G +EA+ F
Sbjct: 305 DYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTF 364
Query: 341 KTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMV 400
M G+ PD TL V+ +C + ++EG + F + T G+ I +V
Sbjct: 365 SDMQK-----YGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALV 418
Query: 401 DLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELDTD 458
L + G ++++H L + K ++ W AL+ G Q K +E + E L L D
Sbjct: 419 TLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 261/563 (46%), Gaps = 83/563 (14%)
Query: 37 SQVVLNGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
+++V L + +++ + +L+ Y+ D + A ++F + W +I GYA+
Sbjct: 157 AEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDG 216
Query: 96 WKSV----ECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+ C R+ S+E PN FT +L C R +L G+ VHG+ + G+ + V
Sbjct: 217 CERALDLFGCMRR--SSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSV 274
Query: 152 ETNLINFYAGRGGVEQARHVFD--------------------------------GMGQRS 179
+ L FY V+ A+ V++ G+ ++
Sbjct: 275 SSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKT 334
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPI------------------------------- 208
++S N ++ GY G F ++++F++M +
Sbjct: 335 LISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKG 394
Query: 209 -RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
RN V+W +M++G G +AL L+ MRR VE + G+
Sbjct: 395 ERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQL 454
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+H ++ A+ Q +V + AL+ Y+ CG + DA + FT + + +WT++I +
Sbjct: 455 LHAHL-----AKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 509
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
A G G EA+ F++M+ G V P+A T + VL AC HAG VDEG + F SM +
Sbjct: 510 AYHGCGSEAISRFRSMLDQG-----VVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINY 564
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
I+P IEHY C+VDLL R+G + EA I MP+K + +WGALL N EL
Sbjct: 565 RITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERA 624
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVV 507
KL + LD + + LV LSN+YA RW +R+++ + ++K G SWI++N V
Sbjct: 625 AVKLFS-LDPNSVSA-LVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNV 682
Query: 508 HDFVAGDMTHKHSYFIYEILSEI 530
H F D TH +S IY+ + I
Sbjct: 683 HLFSVEDTTHPYSDVIYKTVEHI 705
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 175/380 (46%), Gaps = 32/380 (8%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+L A +F + + + WN +I GY++ +++ M S+ + N ++S LS
Sbjct: 52 KLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLS 111
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC RGG L G+Q+H ++ GY V + L+++Y G+ +A VF+ + + V
Sbjct: 112 ACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVL 171
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGR-CKQALSLFGEMRR-A 240
W+ +LAGYV A +F++MP+R+VV+WTT+I+G A++ C++AL LFG MRR +
Sbjct: 172 WSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSS 231
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
V L +G+ +H + ++ +++AL Y
Sbjct: 232 EVLPNEFTLDCVLRVCARLRILYVGKVVH-----GLCIKDGFDFDNSVSSALAEFYCVSD 286
Query: 301 VIGDAYQVFTKMPQRSTVSWT-SMIMAFAKQGLGKEALGLF-----KTMVSDGAGVDGVR 354
+ DA +V+ M + + S+I G KEA +F KT++S+ + G
Sbjct: 287 AVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGY- 345
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
+G + +++F M+ + M+ + S+ G LDEA
Sbjct: 346 -------------AMSGQFKKSKKLFEKMSL-----KHLTSLNTMITVYSKNGELDEAVK 387
Query: 415 LIENMPLKPNDALWGALLGG 434
L + + N W +++ G
Sbjct: 388 LFDKTKGERNCVTWNSMMSG 407
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 52/292 (17%)
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
V+S N +A + G AR +FDEMP+R V SW TMI+G +Q G+ +AL+L M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ V+ G L LG+ IH ++ ++ Q + +AL+H Y C
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIH-----SLLFKSGYQRFGPVGSALLHYYVQC 151
Query: 300 -------------------------------GVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
+IGDA ++F KMP R V+WT++I +A
Sbjct: 152 CGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYA 211
Query: 329 KQGLGKE-ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC-----HAGFVDEGRRIFAS 382
K+ G E AL LF M V P+ TL VL C + G V G I
Sbjct: 212 KREDGCERALDLFGCMRRSSE----VLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDG 267
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ +S + + C+ D +D+A + E+M + + +L+GG
Sbjct: 268 FDFDNSVSSALAEFYCVSDA------VDDAKRVYESMVGEACSNVADSLIGG 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 7/134 (5%)
Query: 3 IERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYI 59
+ RF+ R + L ++C + + Q +H+ + + + T L+ FY
Sbjct: 424 MRRFLVEYSRSTFS----VLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYS 479
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSF 119
L A + F++I +P+ W +I GYA +++ +R M+ PN T+
Sbjct: 480 KCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVA 539
Query: 120 LLSACVRGGLLREG 133
+LSAC GL+ EG
Sbjct: 540 VLSACSHAGLVDEG 553
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 253/514 (49%), Gaps = 45/514 (8%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
L+S +++ IH+ V+ + + I +L+S Y+ + A+ LF + W
Sbjct: 55 LKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSW 114
Query: 83 NHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
N ++ G A+ + + + +M S +E + N FT+ ++SACV EG VH +
Sbjct: 115 NSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAM 174
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G V V L+N Y G VE A R
Sbjct: 175 KLGLVYEVKVVNALVNMYGKFGFVE-------------------------------SAFR 203
Query: 202 VFDEMPI--RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+F EMP +++VSW +++A CAQ G +A + F MR V
Sbjct: 204 LFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMR---VNGFFPDDATMVSLLQAC 260
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS 319
+ LGR + V ++ ++ + L+++Y+ G + ++ +VF ++ + V+
Sbjct: 261 ENFPLGRMVE--VLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVA 318
Query: 320 WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
WT+M+ +A G GKEA+ F+ +V + +G+ PD +T +L AC H+G V EG+
Sbjct: 319 WTAMLAGYAMHGCGKEAIEFFERIVRE----EGMEPDHVTFTHLLSACSHSGLVKEGKYF 374
Query: 380 FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK 439
F M+ + + PR++HY CMVDLL R G LD+AH LI+NMP +PN +WGALLG C++H+
Sbjct: 375 FRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHR 434
Query: 440 NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
N +L L+A LD Y ++LSN+Y+ A W D VR M + + G S
Sbjct: 435 NIDLGKEAAKNLIA-LDPSDPRNY-IMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCS 492
Query: 500 WIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
+I+ +H FV D TH S+ I++ L E++K+
Sbjct: 493 FIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKK 526
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 238/482 (49%), Gaps = 44/482 (9%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+++H + G+ I L+ Y S + A +F+ + + + WN ++ +A++
Sbjct: 358 MEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQN 417
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+ +VE RQM + PN T++ +L AC R G L G+++H ++ G +++F+
Sbjct: 418 RHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLS 477
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
L + Y+ CG AR VF+ + I++ V
Sbjct: 478 NALTDMYS-------------------------------KCGHLSLARNVFN-VSIKDKV 505
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
S+ +I G +Q ++L+LF EMR + + +K G+ IH ++
Sbjct: 506 SYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHL 565
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+++ + N+L+ +Y CG I A +VF ++ + SW +MI+ + +G
Sbjct: 566 VRKLF-----HTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGE 620
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ A+ LF+ M DG GV D+++ I VL AC H G +++G + F M + + I P
Sbjct: 621 FETAINLFEAMKEDG----GVEYDSVSYIAVLSACSHGGLIEKGNKYFKQM-QDYNIEPT 675
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
HY CMVDLL RAG ++EA LI + +P+ +WGALLG C+I+ N EL L
Sbjct: 676 HTHYACMVDLLGRAGQIEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLF 735
Query: 453 AELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVA 512
+L D GY +LLSN+YA A RW + VR+ M G KK PG SW+QI VH F+
Sbjct: 736 -KLKPD-HCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGDQVHGFLV 793
Query: 513 GD 514
G+
Sbjct: 794 GE 795
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 199/467 (42%), Gaps = 59/467 (12%)
Query: 4 ERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIA 60
E V A R V ++L C + +N++ +H V GLS + L+ Y
Sbjct: 225 EMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGK 284
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
+ K+F +D + WN +I G++ +++ +R M++T PN T S +
Sbjct: 285 CGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSM 344
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L GL + G +VHG L G S++F+ +LI+ YA G A +F+ MG R++
Sbjct: 345 LPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNI 404
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGE 236
VSWNS++A + A + +M N V++T ++ CA+
Sbjct: 405 VSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACAR------------- 451
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
G L +G+ IH + Q A + + L+NAL MY
Sbjct: 452 ----------------------LGFLNVGKEIHARIIQTGCATD-----LFLSNALTDMY 484
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ CG + A VF + + VS+ +I+ +++ E+L LF M + G+ PD
Sbjct: 485 SKCGHLSLARNVF-NVSIKDKVSYNILIIGYSQTTNSSESLNLFSEM-----RLSGMTPD 538
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
++ I ++ AC H + +G+ I + R + ++DL ++ G +D A +
Sbjct: 539 IVSFIGIISACAHLSSIKQGKEIHGHLVRKL-FHTHLFAANSLLDLYTKCGRIDLATKVF 597
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGY 463
+ + K + A W ++ G + E A L + DG Y
Sbjct: 598 DRIQHK-DVASWNTMILGYGMRGEFETA----INLFEAMKEDGGVEY 639
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 169/379 (44%), Gaps = 48/379 (12%)
Query: 34 QIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT--VWNHIIRGYA 90
Q+H+ +LN L +I L+ Y + + + LF S T +WN +IR Y+
Sbjct: 52 QLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQNTLPFSKTAFLWNTLIRAYS 111
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ + Y MV + +P+ TY F+L AC +G +VHG+V G+ +VF
Sbjct: 112 IAGF-FDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVFKVGFDKDVF 170
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
V L+ FY +CG F A VFDEM R+
Sbjct: 171 VGNTLLMFYG-------------------------------NCGFFVDAMNVFDEMFERD 199
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRAR--VEXXXXXXXXXXXXXXXXGDLKLGRWI 268
VSW T+I C+ +G +++L F EM A V ++ + R +
Sbjct: 200 KVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIV 259
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H YV + ++ + V++ NAL+ +Y CG +VF +M +R+ VSW ++I F+
Sbjct: 260 HGYVFKVGLSGH-----VKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFS 314
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
+GL +AL F++M++ G+RP+ +T+ +L G G + R G
Sbjct: 315 FRGLSMDALDAFRSMIN-----TGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRM-G 368
Query: 389 ISPRIEHYGCMVDLLSRAG 407
I I ++D+ +++G
Sbjct: 369 IESDIFIGNSLIDMYAKSG 387
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 169/415 (40%), Gaps = 53/415 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
++H V G + + LL FY A +F + WN +I +
Sbjct: 155 EVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRG 214
Query: 94 TPWKSVECYRQMV--STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
+S+ +++MV + P+ T +L C + VHG V G +V V
Sbjct: 215 FHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKV 274
Query: 152 ETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGY----VSCGDFDGARRVFDEMP 207
L++ Y G E + VFD M +R+ VSWN+++ G+ +S D R + +
Sbjct: 275 GNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGM 334
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
N V+ ++M L + GE+ G KLG
Sbjct: 335 RPNPVTISSM-------------LPVLGEL----------------------GLFKLGME 359
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+H Y R + + + N+LI MYA G A +F KM R+ VSW SM+ F
Sbjct: 360 VHGY-----SLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANF 414
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
A+ A+ L + M + G P+ +T VL AC GF++ G+ I A + +T
Sbjct: 415 AQNRHHFAAVELLRQMQAHGE-----NPNNVTFTNVLPACARLGFLNVGKEIHARIIQT- 468
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSE 442
G + + + D+ S+ G L A + N+ +K + ++G Q +SE
Sbjct: 469 GCATDLFLSNALTDMYSKCGHLSLARNVF-NVSIKDKVSYNILIIGYSQTTNSSE 522
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 246 bits (627), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 49/488 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+++ + +LF + + W +I G+ ++ +++ +R+M + + +T+ +L+
Sbjct: 233 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 292
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC L+EG+QVH ++ Y N+FV + L+
Sbjct: 293 ACGCVMALQEGKQVHAYIIRTDYKDNIFVASALV-------------------------- 326
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
Y C + A VF +M +NVVSWT M+ G Q G ++A+ F +M++ +
Sbjct: 327 -----VMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 381
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASC 299
E L+ G H AR + ++NAL+ +Y C
Sbjct: 382 EPDDFTLGSVISSCANLASLEEGAQFH--------ARALTSGLISFITVSNALVTLYGKC 433
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I D++++F ++ + V+WT+++ +A+ G E +GLF++M++ G ++PD +T
Sbjct: 434 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG-----LKPDKVT 488
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC AG V++G +IF SM GI P +HY CM+DL SRAG ++EA I M
Sbjct: 489 FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 548
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P P+ W LL C+ + N ++ + + ELD A Y VLLS++YA +W++
Sbjct: 549 PFSPDAISWATLLSSCRFYGNMDIGKWA-AEFLMELDPHNTASY-VLLSSVYAAKGKWEE 606
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V +R+ M + G++K PG SWI+ VH F A D ++ S IY L ++ + + Y
Sbjct: 607 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGY 666
Query: 540 EPDITGAF 547
PD+
Sbjct: 667 VPDMNSVL 674
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 225/482 (46%), Gaps = 49/482 (10%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
S H LL+ C +N + +HS ++ +T ++ L+S Y + +A K+
Sbjct: 16 SSSNHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKV 75
Query: 71 FSTIDNPSTTVWNHI-------------------------------IRGYARSHTPWKSV 99
F + +P+ WN I I GYA ++SV
Sbjct: 76 FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 135
Query: 100 ECYRQMVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ Y M+ + N T+S LL + G ++ G Q+HG V+ G+ S VFV + L++
Sbjct: 136 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVD 195
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
Y+ G + AR VFD + +++VV +N+++ G + CG + ++R+F EM R+ +SWT+M
Sbjct: 196 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 255
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I G Q G + A+ +F EM+ ++ L+ G+ +H Y +
Sbjct: 256 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAY-----I 310
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
R + ++ + +AL+ MY C I A VF KM ++ VSWT+M++ + + G +EA+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
F M G+ PD TL V+ +C + ++EG + F + T G+ I
Sbjct: 371 KTFSDMQK-----YGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSN 424
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELD 456
+V L + G ++++H L + K ++ W AL+ G Q K +E + E L L
Sbjct: 425 ALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHGLK 483
Query: 457 TD 458
D
Sbjct: 484 PD 485
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 246 bits (627), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 240/488 (49%), Gaps = 49/488 (10%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+++ + +LF + + W +I G+ ++ +++ +R+M + + +T+ +L+
Sbjct: 233 RVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLT 292
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC L+EG+QVH ++ Y N+FV + L+
Sbjct: 293 ACGCVMALQEGKQVHAYIIRTDYKDNIFVASALV-------------------------- 326
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
Y C + A VF +M +NVVSWT M+ G Q G ++A+ F +M++ +
Sbjct: 327 -----VMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 381
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQ---PSVRLNNALIHMYASC 299
E L+ G H AR + ++NAL+ +Y C
Sbjct: 382 EPDDFTLGSVISSCANLASLEEGAQFH--------ARALTSGLISFITVSNALVTLYGKC 433
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G I D++++F ++ + V+WT+++ +A+ G E +GLF++M++ G ++PD +T
Sbjct: 434 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG-----LKPDKVT 488
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC AG V++G +IF SM GI P +HY CM+DL SRAG ++EA I M
Sbjct: 489 FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 548
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P P+ W LL C+ + N ++ + + ELD A Y VLLS++YA +W++
Sbjct: 549 PFSPDAISWATLLSSCRFYGNMDIGKWA-AEFLMELDPHNTASY-VLLSSVYAAKGKWEE 606
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
V +R+ M + G++K PG SWI+ VH F A D ++ S IY L ++ + + Y
Sbjct: 607 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGY 666
Query: 540 EPDITGAF 547
PD+
Sbjct: 667 VPDMNSVL 674
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 225/482 (46%), Gaps = 49/482 (10%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
S H LL+ C +N + +HS ++ +T ++ L+S Y + +A K+
Sbjct: 16 SSSNHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKV 75
Query: 71 FSTIDNPSTTVWNHI-------------------------------IRGYARSHTPWKSV 99
F + +P+ WN I I GYA ++SV
Sbjct: 76 FDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSV 135
Query: 100 ECYRQMVSTEA--EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ Y M+ + N T+S LL + G ++ G Q+HG V+ G+ S VFV + L++
Sbjct: 136 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVD 195
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
Y+ G + AR VFD + +++VV +N+++ G + CG + ++R+F EM R+ +SWT+M
Sbjct: 196 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 255
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I G Q G + A+ +F EM+ ++ L+ G+ +H Y +
Sbjct: 256 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAY-----I 310
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEAL 337
R + ++ + +AL+ MY C I A VF KM ++ VSWT+M++ + + G +EA+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
F M G+ PD TL V+ +C + ++EG + F + T G+ I
Sbjct: 371 KTFSDMQK-----YGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSN 424
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG-CQIHKNSELASVVEPKLVAELD 456
+V L + G ++++H L + K ++ W AL+ G Q K +E + E L L
Sbjct: 425 ALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFESMLAHGLK 483
Query: 457 TD 458
D
Sbjct: 484 PD 485
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 256/502 (50%), Gaps = 49/502 (9%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS-TEA 110
T ++S Y + A +LF + + W +I G+A + +++ + M++ ++A
Sbjct: 231 TSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDA 290
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVH-----------------GIVLVKGYCSNVFVET 153
+PN T+ L+ AC G G+Q+H G LV+ Y +++
Sbjct: 291 KPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDS 350
Query: 154 ------------------NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
++IN Y G + +A+ +FD + R+ ++W +++GY+S G
Sbjct: 351 ARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQ 410
Query: 196 FDGARRVFDEMPI--RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A +FD+MP ++ ++WT MI G Q +A++LF EM
Sbjct: 411 VLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLF 470
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
L LG +H + I + + V L N+LI MYA CG I DAY++F+ M
Sbjct: 471 GAVGSVAYLDLGWQLHAMQLKTIY---EYEYDVYLENSLISMYAKCGEIEDAYRIFSNMN 527
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R +SW SMIM + G EAL +++TM+ G V PDA+T + VL AC HAGFV
Sbjct: 528 CRDKISWNSMIMGLSDHGRANEALNMYETMLEFG-----VYPDAVTFLGVLTACAHAGFV 582
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
D+G +F+ M + + P +EHY ++++L RAG + +A + +P++PN +WGAL+G
Sbjct: 583 DKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIG 642
Query: 434 GCQIHK-NSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
C + K ++++A +L+ ELD A G+ V L NIYA R + ++R++M GV
Sbjct: 643 VCGLSKTDADIARRAATRLL-ELDPLNAPGH-VTLCNIYAANDRHLEETSLRREMRMKGV 700
Query: 493 KKPPGQSWIQINGVVHDFVAGD 514
+K PG SWI + G VH F +GD
Sbjct: 701 RKAPGCSWILVKGKVHAFSSGD 722
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 176/377 (46%), Gaps = 72/377 (19%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
W ++ YA+ VE R + N TY+ +LSA ++ G+ R+ ++ +
Sbjct: 75 WTSMLTNYAKH----GYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMP 130
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
+ NV T +++ YAG G ++ AR VFD M +R+VVSWNS++ G + GD + AR+
Sbjct: 131 ER----NVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARK 186
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
VFD+ P +NVVSW MI G + GR A LF ++ V
Sbjct: 187 VFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNV------------------- 227
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
I W ++I Y G + +A+++F MP+++ VSWT
Sbjct: 228 ------ITW-------------------TSMISGYCRVGDVNEAFRLFQIMPEKNVVSWT 262
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
+MI FA G +EAL LF M++ + +P+ T + ++ AC GF G+++ A
Sbjct: 263 AMIGGFAWNGFYREALLLFLDMMT----LSDAKPNEETFVSLVYACAGMGFPCLGKQLHA 318
Query: 382 SM--NRTWGISPRIEHYGC-----MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
M NR W +++ Y C +V + S G +D A + E +D + +++ G
Sbjct: 319 QMILNR-W----KLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMING 373
Query: 435 C----QIHKNSELASVV 447
Q+HK EL V
Sbjct: 374 YVQAGQLHKAQELFDTV 390
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 175/421 (41%), Gaps = 48/421 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T +LS Y + A K+F + + WN ++ G R+ +E R++ +
Sbjct: 138 TAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRN----GDLEEARKVFDDTPD 193
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
N +++ ++ V G + + + + + C NV T++I+ Y G V +A +
Sbjct: 194 KNVVSWNAMIEGYVENGRMDDAKDLFDQI----ECRNVITWTSMISGYCRVGDVNEAFRL 249
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI-----RNVVSWTTMIAGCAQKGR 226
F M +++VVSW +++ G+ G + A +F +M N ++ +++ CA G
Sbjct: 250 FQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGF 309
Query: 227 CKQALSLFGEM--------------RRARVEXXXXXXXXXXXXXXXXGDLK------LGR 266
L +M R+ V GD+K
Sbjct: 310 PCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNS 369
Query: 267 WIHWYVQQRIVARNQQQ-PSVRLNN-----ALIHMYASCGVIGDAYQVFTKMP--QRSTV 318
I+ YVQ + + Q+ +V + N +I Y S G + A +F MP + ++
Sbjct: 370 MINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSI 429
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+WT MI + + L EA+ LF M++ GA P T V+ A ++D G +
Sbjct: 430 AWTLMIYGYVQNELIAEAINLFAEMMAQGAS-----PINSTYAVLFGAVGSVAYLDLGWQ 484
Query: 379 IFASMNRT-WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+ A +T + + ++ + ++ G +++A+ + NM + + W +++ G
Sbjct: 485 LHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCR-DKISWNSMIMGLSD 543
Query: 438 H 438
H
Sbjct: 544 H 544
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 248/497 (49%), Gaps = 33/497 (6%)
Query: 22 LLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL++C++ + + +H++ + G I T +++ Y + A K+F + +
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERN 116
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I GY R+ ++ + +M ++S ++ GG R G+ +
Sbjct: 117 DVTWNAMIGGYLRNGDAKSALLAFEEMPGK----TRVSWSQMI-----GGFARNGDTLTA 167
Query: 139 IVL---VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
V +V + T +++ YA +G +E AR VF+ M +R+ W+S++ GY GD
Sbjct: 168 RKFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGD 227
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A +F +P+RN+ W +MIAG Q G ++AL FGEM E
Sbjct: 228 VMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSA 287
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
GDL G+ +H ++ + +A NQ S LI MYA CG + +A VF +R
Sbjct: 288 CAQLGDLDAGKQMHHMIECKGIAVNQFVLS-----GLIDMYAKCGDLVNARLVFESCNER 342
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ W +MI FA G E L M +RPDA+T I VL AC H G V E
Sbjct: 343 NVFCWNAMIAGFAVNGQCNEVLEYLDRMEE-----SNIRPDAVTFITVLSACAHGGLVSE 397
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ + M +GI I HYGCMVDLL RAG L EA+ LI+ MP+KPN+ + GA++G C
Sbjct: 398 ALEVISKMEE-YGIEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGAC 456
Query: 436 QIHKNSELASVVEPKLVAELDTDGAA---GYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
IH + ++A +++ + D AA + VLLSNIYA +++W+ +R M++ G
Sbjct: 457 WIHSDMKMAE----QVMKMIGVDSAACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGS 512
Query: 493 KKPPGQSWIQINGVVHD 509
+K PG S I ++ D
Sbjct: 513 EKIPGCSSIILSNSAVD 529
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 252/511 (49%), Gaps = 56/511 (10%)
Query: 34 QIHSQVVLNGLSQKTNIIT---KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
QIH+ ++ G + TNI++ KL+ Y + L+ A LF I P+ +N +I G
Sbjct: 35 QIHAMLLTTGTN--TNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMV 92
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ ++ +R M N FT+ ++ CV +++G+QVHG++ G ++V
Sbjct: 93 YNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVL 152
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP--- 207
+ LI+ Y G V+ A VFDGM +R V SW S++ G+ + G + A +F+ M
Sbjct: 153 IGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEG 212
Query: 208 ------------------------------------IRNVVSWTTMIAGCAQKGRCKQAL 231
I +VV+W +I+G AQ + ++
Sbjct: 213 YEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETF 272
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
++F EM + + G +K GR +H ++ R +V + +A
Sbjct: 273 TVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFI-----CRKGFDANVFIASA 327
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
LI MY+ CG + DA VF K+ ++ SW +MI F K G+ AL LF M +G
Sbjct: 328 LIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEG---- 383
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
++P+ +T +L AC H+G V++G IF M +G+ EHY C+VDLL R+G + E
Sbjct: 384 -LQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVE 442
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
A+ I+ MP++ +++ GA L GC+IH +LA + +++ + +G +G V LSNIY
Sbjct: 443 AYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIM-RMQLNG-SGSFVTLSNIY 500
Query: 472 AFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
A W++ VR+ M E V K PG SW++
Sbjct: 501 AAEGDWEEAGNVRKVMKERNVNKWPGSSWLE 531
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 232/462 (50%), Gaps = 22/462 (4%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
+++ Y+ Q+ A KLF W +I GY R ++ E Y QM +
Sbjct: 272 MIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK 331
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVK-GYCSNVFVETNLINFYAGRGGVEQARHVF 172
+ L+S ++ G + E QV + + C N ++I Y G + +A ++F
Sbjct: 332 ----TALMSGLIQNGRIDEASQVFSQLNKRDAICWN-----SMIAGYCQSGRMSEALNLF 382
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
M ++ VSWN++++GY G+ D A +F+ M +RNV+SW ++I G Q G AL
Sbjct: 383 RQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
M + + L++G+ +H ++ ++ + ++NAL
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLH-----ELILKSGYINDLFVSNAL 497
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I MYA CG + A +VF + +SW S+I +A G EA F+ M S+G
Sbjct: 498 IAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEG----- 552
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
PD +T I +L AC HAG ++G +F M + I P EHY C+VDLL R G L+EA
Sbjct: 553 TVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEA 612
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
++ M +K N LWG+LL C++HKN EL + +L+ EL+ A+ Y+ LSN++A
Sbjct: 613 FNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLL-ELEPHNASNYIT-LSNMHA 670
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
A RW+DV +R M E K PG SWI++ + +FV+ D
Sbjct: 671 EAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDD 712
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 172/407 (42%), Gaps = 39/407 (9%)
Query: 30 QNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY 89
Q I +V N + + +++ + + ++ A +LF + + WN +I GY
Sbjct: 30 QGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGY 89
Query: 90 ARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVK--GYCS 147
++ VE ++ AE + F+++ +++ R G+L + ++ +V K C
Sbjct: 90 LHNNM----VEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACW 145
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
N +I YA +G + A VF+ M + +VS+NS+LAGY G A + F+ M
Sbjct: 146 NA-----MIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMA 200
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
RNVVSW M+AG A LF ++ G + G+
Sbjct: 201 ERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNA---------VSWVTMLCGFARHGK- 250
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
V+ R + +V NA+I Y I +A ++F + P + VSWT+MI +
Sbjct: 251 ---IVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGY 307
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
+ G EA ++ M D ++ G +DE ++F+ +N+
Sbjct: 308 VRVGKLDEAREVYNQM---------PYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRD 358
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
I + M+ ++G + EA L MP+K N W ++ G
Sbjct: 359 AIC-----WNSMIAGYCQSGRMSEALNLFRQMPVK-NAVSWNTMISG 399
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 31/309 (10%)
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
+ G + E ++V V+ K + + +++ +A G V AR +FD M QR++VSWN+
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHAT----YNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNT 84
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXX 245
++AGY+ + A ++FD M R+ SW MI +KG ++A LF E
Sbjct: 85 MIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF--------ELV 136
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
G K GR+ +++ + + V N+++ Y G +G A
Sbjct: 137 PDKLDTACWNAMIAGYAKKGRFDD---AEKVFEKMPVKDLVSY-NSMLAGYTQNGKMGLA 192
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
+ F +M +R+ VSW M+ F A LF+ + P+A++ + +LC
Sbjct: 193 MKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPD---------PNAVSWVTMLC 243
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
G + E R++F M + + M+ + +DEA L + P K +
Sbjct: 244 GFARHGKIVEARKLFDRMP-----CKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK-DC 297
Query: 426 ALWGALLGG 434
W ++ G
Sbjct: 298 VSWTTMING 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 14/242 (5%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G++ Q L SC N+ L Q+H ++ +G + L++ Y +Q A
Sbjct: 451 GKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSA 510
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
K+F I+ WN +I GYA + ++ + QM S P+ T+ +LSAC
Sbjct: 511 EKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHA 570
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVE--TNLINFYAGRGGVEQARHVFDGMGQRSVVS-WN 184
GL +G + +++G+ E + L++ G +E+A ++ GM ++ W
Sbjct: 571 GLTNQGVDLFK-CMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWG 629
Query: 185 SILAG-----YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
S+LA + G R + E+ N ++ T+ A+ GR + L MR
Sbjct: 630 SLLAACRVHKNMELGKIAALRLL--ELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRE 687
Query: 240 AR 241
R
Sbjct: 688 RR 689
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 171/586 (29%), Positives = 267/586 (45%), Gaps = 85/586 (14%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
++ L +H+ ++ +G S + KL+ YI + A KLF + N WN +I
Sbjct: 16 SLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74
Query: 88 GYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-C 146
+ +++E Y M+ P+ +T+S + A G+ REG++ HG+ +V G+
Sbjct: 75 SHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEV 134
Query: 147 SNVFVETNLINF-------------------------------YAGRGGVEQARHVFDGM 175
S+ FV T +++ Y RG +A VF+ M
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM 194
Query: 176 --------------------------------------GQRSVV-SWNSILAGYVSCGDF 196
G SVV S S+L Y C
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMV 254
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ + +VF+ + + V+WT+ I G Q GR + ALS+F EM R +
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHAC 314
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
L+ G IH + V N+ ++ ALIH+Y CG + A VF + +
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKY-----VDAALIHLYGKCGNVEKARSVFESLTELD 369
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
VS +MI A+A+ G G EAL LF+ M G +P+ +T I +L AC +AG V+EG
Sbjct: 370 VVSINTMIYAYAQNGFGHEALELFERMKKLGH-----KPNVVTFISILLACNNAGLVEEG 424
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
+IF+ + I +HY CM+DLL RA +EA LIE P+ W LL C+
Sbjct: 425 CQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACK 483
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
IH E+A K++ + DG G +LL+NIYA A +W +VI ++ ++ +KK P
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDG--GTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTP 541
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
SW+ I+ VH F+AGD++H ++ I E+L E+I++ Y PD
Sbjct: 542 AMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPD 587
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 11/246 (4%)
Query: 3 IERFVPASGRRSIQQHVFTL---LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLS 56
+E F G R I+ + +TL L SC N+ +L+ IH VV +GL T LL+
Sbjct: 188 LEVFEDMVGSR-IKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLT 246
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y + ++ + K+F+++ S W I G ++ ++ +R+M+ PN FT
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFT 306
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+S +L AC +L GEQ+H + + G N +V+ LI+ Y G VE+AR VF+ +
Sbjct: 307 FSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALS 232
+ VVS N+++ Y G A +F+ M NVV++ +++ C G ++
Sbjct: 367 ELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQ 426
Query: 233 LFGEMR 238
+F +R
Sbjct: 427 IFSLIR 432
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 258/521 (49%), Gaps = 21/521 (4%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
++L +C + NL Q+H+ ++ + L + T+ L+SFY ++ A+ FS I
Sbjct: 359 SILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISR 418
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN I+ + + + M+ + P+ T ++ C +++ +++
Sbjct: 419 KDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEI 478
Query: 137 HGIVLVKG--YCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQ-RSVVSWNSILAGYVS 192
HG + G C+ N +++ Y+ G +E A +F + + R++V+ NS+++GYV
Sbjct: 479 HGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVG 538
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G A +F M ++ +W M+ A+ +QAL LF +++ ++
Sbjct: 539 LGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSL 598
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
+ L R H Y+ + + L L+ YA CG+IG AY++F
Sbjct: 599 IPVCTQMASVHLLRQCHGYIIR------SSFEDLHLKGTLLDAYAKCGIIGYAYKIFQSS 652
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+ V +T+MI +A G+ ++AL F M++ G ++PD + +L AC HAG
Sbjct: 653 VDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMG-----IKPDHVIFTSILSACSHAGR 707
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
+ EG +IF S+ + G+ P IE + C+VDLL+R G + EA+ + +P++ N +WG LL
Sbjct: 708 IAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLL 767
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
G C+ + EL +V KL +++ + Y+V LSN+YA RW V+ VR+ M +
Sbjct: 768 GACKTYHEVELGRIVADKLF-KIEANDIGNYIV-LSNLYAADDRWDGVMEVRKMMRNKDL 825
Query: 493 KKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
KKP G SWI++ + FV GD +H IY L + +Q
Sbjct: 826 KKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTLDQQ 866
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 175/400 (43%), Gaps = 46/400 (11%)
Query: 22 LLQSCNNI--QNLIQ-IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L+SC+ + NL + +HS VV G LL+ Y L HKLF
Sbjct: 49 ILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCD 108
Query: 79 TTVWNHIIRGYARS-HTPWKSVECYRQMVST-EAEPNGFTYSFLLSACVRGGLLREGEQV 136
+WN ++ GY+RS ++ +R M S+ E P+ T + +L C R G L G+ V
Sbjct: 109 PVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSV 168
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG V+ G+ + F L++ YA G V+C
Sbjct: 169 HGYVIKSGFEMDTFAGNALVSMYAK--------------------------CGLVACD-- 200
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A VFD + ++VVSW MIAG A+ G K+A SLF M + V+
Sbjct: 201 --AYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC 258
Query: 257 XXXGD---LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
+ + GR IH YV Q + V + NAL+ Y G +A +F M
Sbjct: 259 ASFDENIAHRCGRQIHSYVLQ----WPELSADVSVCNALLSFYLKVGRTKEAESLFWAMD 314
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R VSW ++I +A G ++L +F +VS ++ + D++T++ +L AC +
Sbjct: 315 ARDLVSWNTIIAGYALNGEWLKSLHVFGNLVS----LEMLLLDSVTMVSILPACAQLDNL 370
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
G+++ A + R + +V ++ G+++EA+
Sbjct: 371 QAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAY 410
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 194/427 (45%), Gaps = 38/427 (8%)
Query: 34 QIHSQVV-LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
QIHS V+ LS ++ LLSFY+ + + A LF +D WN II GYA +
Sbjct: 272 QIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALN 331
Query: 93 HTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFV 151
KS+ + +VS E + T +L AC + L+ G+QVH +L + +F
Sbjct: 332 GEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPF---LFE 388
Query: 152 ETN----LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD------FDGARR 201
+T+ L++FYA G +E+A H F + ++ ++SWNSIL + G+ F
Sbjct: 389 DTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAF---GEKRHHSRFLSLLH 445
Query: 202 VFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRA---RVEXXXXXXXXXXXXXX 257
V ++ IR + V+ T+I CA R K+ + G R+
Sbjct: 446 VMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYS 505
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G+++ ++ ++ ++ N+LI Y G DA +F+ M +
Sbjct: 506 KCGNIEYA--------NKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDL 557
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+W M+ +A+ ++AL LF + + G++PD +T++ ++ C V R
Sbjct: 558 TTWNLMVRVYAENDCPEQALELFLKLQT-----QGMKPDVVTIMSLIPVCTQMASVHLLR 612
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
+ + R+ ++ G ++D ++ G + A+ + ++ + + ++ A++GG +
Sbjct: 613 QCHGYIIRSSFEDLHLK--GTLLDAYAKCGIIGYAYKIFQS-SVDKDLVMFTAMIGGYAM 669
Query: 438 HKNSELA 444
H SE A
Sbjct: 670 HGMSEKA 676
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 187/437 (42%), Gaps = 71/437 (16%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFY-----IASDQLQHAHKL 70
+ T+L C NL +H V+ +G T L+S Y +A D A+ +
Sbjct: 149 IATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACD----AYAV 204
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV---RG 127
F +I + WN +I G A + ++ + M+ +PN T + +L C
Sbjct: 205 FDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDEN 264
Query: 128 GLLREGEQVHGIVLV-KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSI 186
R G Q+H VL ++V V L++FY G ++A +F M R +VSWN+I
Sbjct: 265 IAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTI 324
Query: 187 LAGYVSCGDFDGARRVFD-----EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
+AGY G++ + VF EM + + V+ +++ CAQ
Sbjct: 325 IAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQ------------------ 366
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+L+ G+ +H Y+ + NAL+ YA CG
Sbjct: 367 -----------------LDNLQAGKQVHAYILRHPFLFEDTSA----GNALVSFYAKCGY 405
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
I +AY F+ + ++ +SW S++ AF ++ L L M+ +D +RPD++T++
Sbjct: 406 IEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLK----LD-IRPDSVTIL 460
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGI----SPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
++ C V + + I R+ + +P + + ++D S+ G ++ A+ + +
Sbjct: 461 TIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGN--AILDAYSKCGNIEYANKMFQ 518
Query: 418 NMPLKPNDALWGALLGG 434
N+ K N +L+ G
Sbjct: 519 NLSEKRNLVTCNSLISG 535
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 23/263 (8%)
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK-QALSLFGEMRR 239
V+ ++L Y CG D ++FD+ + V W +++G ++ G+ + +F M
Sbjct: 79 VTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHS 138
Query: 240 A-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ V G+L G+ +H Y V ++ + NAL+ MYA
Sbjct: 139 SGEVMPSSVTIATVLPVCARSGNLNGGKSVHGY-----VIKSGFEMDTFAGNALVSMYAK 193
Query: 299 CGVIG-DAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
CG++ DAY VF + + VSW +MI A+ GL KEA LF M+ V+P+
Sbjct: 194 CGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK-----GSVKPNY 248
Query: 358 ITLIVVLCACCHAGFVDE------GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
T+ +L C A F DE GR+I + + + +S + ++ + G E
Sbjct: 249 ATVANILPVC--ASF-DENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKE 305
Query: 412 AHGLIENMPLKPNDALWGALLGG 434
A L M + + W ++ G
Sbjct: 306 AESLFWAMDAR-DLVSWNTIIAG 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL--KLGR 266
RN ++W + I R +ALS F + L LG+
Sbjct: 4 RNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGK 63
Query: 267 WIHWYVQQRIVARNQQQPSVRLNN-ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
+H YV + Q S + + AL++MYA CG++ D +++F + + V W ++
Sbjct: 64 CLHSYVVK------QGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLS 117
Query: 326 AFAKQGLGK-EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMN 384
+++ G + + +F+ M S G V P ++T+ VL C +G ++ G+ + +
Sbjct: 118 GYSRSGKNDADVMKVFRAMHSSGE----VMPSSVTIATVLPVCARSGNLNGGKSVHGYVI 173
Query: 385 RTWGISPRIEHYGCMVDLLSRAGFLD-EAHGLIENMPLKPNDALWGALLGG 434
++ G +V + ++ G + +A+ + +++ + + W A++ G
Sbjct: 174 KS-GFEMDTFAGNALVSMYAKCGLVACDAYAVFDSI-IHKDVVSWNAMIAG 222
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 255/515 (49%), Gaps = 52/515 (10%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
++Q ++H+ + NG + I + L++ Y QL A KLF I + W +I
Sbjct: 44 SLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIA 103
Query: 88 GYARSHTPWKSVECYRQMVSTEAEPNG--FTYSFLLSACVRGGLLREGEQVHGIVLVKGY 145
AR ++E + +M + + + F +L AC G GEQVH +VL +
Sbjct: 104 TCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSF 163
Query: 146 CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
+ FV + LI Y+ G V AR VFDGM + +V+ N++++GY G + A + +
Sbjct: 164 EIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVEN 223
Query: 206 MPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX----------------- 244
M + NVV+W +I+G AQK + +F M RVE
Sbjct: 224 MKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFR 283
Query: 245 ------------------XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSV 286
++ G+ IH Y +V + V
Sbjct: 284 NEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYA---LVIGVEDDLYV 340
Query: 287 RLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSD 346
R +AL+ MYA CG I +A +F KMP+++TV+ SMI +A G +EA+ LF M +
Sbjct: 341 R--SALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEME 398
Query: 347 GAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
G + D +T L AC H G ++ G+R+F M + I PR+EHY CMVDL RA
Sbjct: 399 GVP----KLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRA 454
Query: 407 GFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
G L+EA+G+I++MP+KP+ +WGALL C+ H + ELA V K ++EL+ + +AG +L
Sbjct: 455 GKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVA-AKHLSELEPE-SAGNRLL 512
Query: 467 LSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
LS++YA A W V +++++ + ++K G SWI
Sbjct: 513 LSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWI 547
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 51/332 (15%)
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
+EP +Y+ L+ L++G+++H ++ GY + +NLI Y G + AR
Sbjct: 27 SEPE--SYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIAR 84
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ 229
+FD + Q ++ W +++A CG D A VF EM N ++ + C
Sbjct: 85 KLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGH 144
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
GD G +H +V + + ++
Sbjct: 145 V-----------------------------GDRIYGEQVHC-----LVLKCSFEIDAFVS 170
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
+ALI MY+ CG + DA +VF M + V+ +++ +A+QGL EAL L + M
Sbjct: 171 SALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENM-----K 225
Query: 350 VDGVRPDAIT---LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRA 406
+ GV P+ +T LI C V E IF MN + P + + ++ +
Sbjct: 226 LMGVNPNVVTWNALISGFAQKCDREMVSE---IFRLMNED-RVEPDVVSWTSVLSGFVQN 281
Query: 407 GFLDEAHGLIENMPLK---PNDALWGALLGGC 435
+EA + M L P A ALL C
Sbjct: 282 FRNEEAFDAFKKMLLLGFCPTSATISALLPAC 313
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 263/548 (47%), Gaps = 68/548 (12%)
Query: 14 SIQQHVF------TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT--KLLSFYIASDQLQ 65
S QQ V+ T L NI Q+ + SQK +I+T +L+ Y + LQ
Sbjct: 24 STQQDVYFANLNITALSRAGNITAARQLFDKT-----SQK-DIVTYNSMLTAYWQNGFLQ 77
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
H+ LF++I + WN II ++ + + M E N +Y+ ++S V
Sbjct: 78 HSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAM----PEKNVASYNAMMSGFV 133
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFY---AGRGGVEQARHVFDGMGQRSVVS 182
+ G + E ++V + NV T +I+ Y G G+++AR +FD M R+ VS
Sbjct: 134 KMGRVEEAKKVFEEIPRP----NVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVS 189
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVS----------------------------- 213
W +++G V G + A VF MP +NVV+
Sbjct: 190 WTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDR 249
Query: 214 --WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY 271
W MI G AQ GR ++AL+LF +M R ++ L GR +
Sbjct: 250 ACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTN-- 307
Query: 272 VQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQG 331
+ ++ + ++NAL+ MY+ CG I + F ++ VSW ++I AFA+ G
Sbjct: 308 ---ALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHG 364
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
L A F MV+ G V PD IT + +L ACC AG VDE +F M +GI P
Sbjct: 365 LYDRARYYFDHMVTAG-----VTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILP 419
Query: 392 RIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKL 451
R EHY C+VD++SRAG L A +I+ MP + + ++WGA L GC IH N +L + +
Sbjct: 420 RSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLGELA-ARS 478
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
+ LD + Y V++SNIYA A +W+DV +R M E G+KK SW+QI + FV
Sbjct: 479 ILNLDPYNSGAY-VMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSWMQIGNKLQCFV 537
Query: 512 AGDMTHKH 519
GD +H +
Sbjct: 538 GGDPSHPN 545
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 158/492 (32%), Positives = 241/492 (48%), Gaps = 46/492 (9%)
Query: 15 IQQHVFTLLQS-CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS- 72
+ + V LL+S C ++ QI +Q++++ L T I L++ + + L + LF+
Sbjct: 8 LAERVVKLLKSFCRTQIHVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPLFTH 67
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
I P ++N +IR ++ SH P + Y M PN FT+ FL + +
Sbjct: 68 LIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQ 127
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
+ V+ V+ GY ++++V NS+L Y S
Sbjct: 128 SQCVYTHVIKLGYVNDIYVN-------------------------------NSLLDVYAS 156
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
G + R++FDEMP R+VVSWT MI G G+ AL +F +M+ V
Sbjct: 157 YGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNA 216
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
+++G WI +V RN + V L ALI MY CG + + +VF M
Sbjct: 217 LSACASSCAIEMGVWI-----DDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDM 271
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+++ + +I A +EAL F M +DGVR D +TL+ VL AC H+G
Sbjct: 272 KEKNVFTLNVVIKGLALAKSVEEALLWFNRM-----ELDGVRADEVTLVTVLSACSHSGL 326
Query: 373 VDEGRRIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
V++GR IF+ + + +G P ++HY CMVDLL+RAG L EA +I+ MP +P A+WG+L
Sbjct: 327 VEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSL 386
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
L G + + E + KLV EL+ A Y V LSN+YA A RW DV +R M E G
Sbjct: 387 LLGSKSRDDLEFSEFAATKLV-ELEPYNTA-YYVQLSNLYAEAGRWSDVERIRGMMKERG 444
Query: 492 VKKPPGQSWIQI 503
+ K G S +++
Sbjct: 445 LTKDLGCSSVEV 456
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
+ SI + FT L +S ++ + +Q +++ V+ G + LL Y + L+
Sbjct: 102 KNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLE 161
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
+LF + W +I GY ++ + QM PN T LSAC
Sbjct: 162 LCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACA 221
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNS 185
+ G + +V G+ +V + T LI+ Y G VE+ VF M +++V + N
Sbjct: 222 SSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNV 281
Query: 186 ILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFG 235
++ G + A F+ M + V V+ T+++ C+ G ++ +F
Sbjct: 282 VIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFS 335
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 250/534 (46%), Gaps = 48/534 (8%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA 60
ML+E VP + L N+I+ +Q+H V G + L+ Y
Sbjct: 158 MLLEMMVP---DHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAK 214
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
+++A ++F + +WN ++ Y + P ++ + M + FT+S L
Sbjct: 215 CGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSL 274
Query: 121 LSACVRGGL--LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
LS L G+QVH +VL + + S+V V + LIN YA ++ ++ D
Sbjct: 275 LSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYA------KSENIID----- 323
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
ARRVFDEM IRNVV+W TMI G G + + L EM
Sbjct: 324 --------------------ARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEML 363
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
R + +H + + Q + + N+LI Y+
Sbjct: 364 REGFLPDELTISSIISSCGYASAITETLQVHAFA-----VKLSCQDFLSVANSLISAYSK 418
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG I A++ F Q V+WTS+I A+A GL +++ +F+ M+S G ++PD I
Sbjct: 419 CGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG-----IKPDRI 473
Query: 359 TLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
+ VL AC H G V +G F M + I P EHY C+VDLL R G ++EA ++ +
Sbjct: 474 AFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRS 533
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQ 478
MP++ + GA +G C++H N ELA + KL ++ + + Y V +SNI+A K W
Sbjct: 534 MPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFL-IEPEKSVNYAV-MSNIFASQKHWY 591
Query: 479 DVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
DV +R+ M + K PG SWI+I +H FV+ D +H ++ +Y L+ +++
Sbjct: 592 DVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLR 645
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 183/426 (42%), Gaps = 47/426 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ ++ G Q ++ ++LS Y+ + + A KLF + + WN +IR +
Sbjct: 81 QLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRN 140
Query: 94 TPWKS------VECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCS 147
+S +R+M+ P+ T++ L+ C + + G Q+H + G+
Sbjct: 141 DENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDL 200
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP 207
+ FV L+ YA G VE AR VF + R +V WN +++ YV + A RVF+ M
Sbjct: 201 DCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMR 260
Query: 208 IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRW 267
+ +VV+ AL + G+
Sbjct: 261 L-DVVNGDEFTFSSLLSVISDDALEYY----------------------------DFGKQ 291
Query: 268 IHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
+H +V R V + +ALI+MYA I DA +VF +M R+ V+W +MI+ F
Sbjct: 292 VH-----SLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGF 346
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
G G E + L K M+ +G PD +T+ ++ +C +A + E ++ A +
Sbjct: 347 GNHGDGNEVMKLVKEMLR-----EGFLPDELTISSIISSCGYASAITETLQVHAFAVK-L 400
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
+ ++ S+ G + A E + +P+ W +L+ H +E ++ +
Sbjct: 401 SCQDFLSVANSLISAYSKCGSITSAFKCFE-LTSQPDLVTWTSLIYAYAFHGLAEKSTEM 459
Query: 448 EPKLVA 453
K+++
Sbjct: 460 FEKMLS 465
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 157/394 (39%), Gaps = 73/394 (18%)
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L + G L EG+Q+H ++ G+C + ++ +++ Y E A+ +F+ + R+V
Sbjct: 67 LKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNV 126
Query: 181 VSWNSILAGYVSCGD----------FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA 230
VSWN ++ V D F RR+ EM + + +++ +I C Q
Sbjct: 127 VSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQ------- 179
Query: 231 LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNN 290
D+++G +H + + +
Sbjct: 180 ----------------------------FNDIEMGVQLHCF-----TVKVGFDLDCFVGC 206
Query: 291 ALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
AL+ +YA CG + +A +VF + R V W M+ + L +EA +F +M +
Sbjct: 207 ALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSM-----RL 261
Query: 351 DGVRPDAITLIVVLCACCHAG--FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
D V D T +L + D G+++ + + R + ++++ +++
Sbjct: 262 DVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQ-SFDSDVLVASALINMYAKSEN 320
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKN-SELASVVEPKLVAELDTD--------- 458
+ +A + + M ++ N W ++ G H + +E+ +V+ L D
Sbjct: 321 IIDARRVFDEMSIR-NVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIIS 379
Query: 459 --GAAGYLVLLSNIYAFAKRW--QDVIAVRQKMI 488
G A + ++AFA + QD ++V +I
Sbjct: 380 SCGYASAITETLQVHAFAVKLSCQDFLSVANSLI 413
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 240/496 (48%), Gaps = 57/496 (11%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVW 82
+ N++ + H+ VV +GLS T L++ Y+ ++ HAHKLF + +P+ W
Sbjct: 33 FHTFNHLPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSW 92
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
+ ++ GY R P ++ + QM T PN FT+S L++AC L G ++H +V V
Sbjct: 93 SLLMAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEV 152
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
GY S++ V ++LI+ Y C D A+ +
Sbjct: 153 FGYRSDLVVCSSLIDMYG-------------------------------KCNRVDEAQMI 181
Query: 203 FDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
FD M +RNVVSWT+MI +Q G+ AL LF E R+
Sbjct: 182 FDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTACA---- 237
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTS 322
LGR + +V R S + +AL+ MYA CG + + +VF ++ S V +TS
Sbjct: 238 SLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTS 297
Query: 323 MIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFAS 382
MI+ AK GLG +L LF+ MV ++P++IT + VL +F S
Sbjct: 298 MIVGAAKYGLGTLSLRLFQEMVD-----RRIKPNSITFVGVL-------------HLFNS 339
Query: 383 MNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND--ALWGALLGGCQIHKN 440
MN +G+ P HY C+VD+L R G +DEA+ L +++ + D LWG LL ++H
Sbjct: 340 MNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLHGR 399
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
++A + V E + AA Y V LSN YA A W++ +R +M GV K PG SW
Sbjct: 400 VDIA-IEASNRVIESNQQVAAAY-VTLSNTYALAGDWENAHNLRSEMKRTGVYKEPGSSW 457
Query: 501 IQINGVVHDFVAGDMT 516
I+I + F AGD++
Sbjct: 458 IEIKDSTYLFHAGDLS 473
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 239/528 (45%), Gaps = 51/528 (9%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+ C IQ L ++HS V+ +GL + L+ Y +Q A K+F + +
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHN 327
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQ----MVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
W ++ GY R ++ E R ++ PN FT+S +L AC GE
Sbjct: 328 VMSWTALVNGYVRGGGGYER-EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGE 386
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVHG + G + V L++ YA G +E
Sbjct: 387 QVHGQTIKLGLSAIDCVGNGLVSVYAKSGRME---------------------------- 418
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXX 254
AR+ FD + +N+VS T + + L E+
Sbjct: 419 ---SARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLS 475
Query: 255 XXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
G + G IH +V + + + +NNALI MY+ CG A QVF M
Sbjct: 476 GAACIGTIGKGEQIH-----AMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMED 530
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
+ ++WTS+I FAK G +AL LF M+ G V+P+ +T I VL AC H G +D
Sbjct: 531 CNVITWTSIINGFAKHGFASKALELFYNMLETG-----VKPNDVTYIAVLSACSHVGLID 585
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
E + F SM GI PR+EHY CMVDLL R+G L EA I +MP + +W LG
Sbjct: 586 EAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGS 645
Query: 435 CQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKK 494
C++H+N++L K++ E + A Y +LLSN+YA RW+DV A+R+ M + + K
Sbjct: 646 CRVHRNTKLGEHA-AKMILEREPHDPATY-ILLSNLYATEGRWEDVAAIRKNMKQKQITK 703
Query: 495 PPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
G SWI++ VH F GD H + IYE L E+ + Y P+
Sbjct: 704 EAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPN 751
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 49/369 (13%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL+ C +N +H ++ + L T ++ L++ Y S+ A +F +++N
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 79 TTV--WNHIIRGYARSHTPWKSVECYRQMVSTEA-EPNGFTYSFLLSACVRGGLLREGEQ 135
V ++ II +A + K+VE + Q++ + PN + ++ ++ AC++GG + G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 136 VHGIVLVKGYC-SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+ G VL GY S+V V LI+ + +G S
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFV-KG---------------------------CSLA 209
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR-VEXXXXXXXXXX 253
D + AR+VFD+M +NVV+WT MI AQ G +A+ LF EM +
Sbjct: 210 DLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLI 269
Query: 254 XXXXXXGDLKLGRWIH-WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
L LG+ +H W ++ +V + + +L+ MYA CG++ +A +VF M
Sbjct: 270 SVCAEIQFLSLGKELHSWVIRSGLVL------DLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 313 PQRSTVSWTSMIMAFAKQGLG--KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+ + +SWT+++ + + G G +EA+ +F M+ G GV P+ T VL AC
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQG----GVAPNCFTFSGVLKACASL 379
Query: 371 GFVDEGRRI 379
D G ++
Sbjct: 380 PDFDFGEQV 388
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 59/344 (17%)
Query: 104 QMVSTEAEPNG--FTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAG 161
+ TE+ N T S LL C+R G+ +H + + + +LI Y+
Sbjct: 40 NLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSK 99
Query: 162 RGGVEQARHVFDGM--GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-----NVVSW 214
A +F M +R VVS++SI++ + + + A +FD++ ++ N +
Sbjct: 100 SNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCF 159
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T +I C + G K L LFG + LK G +
Sbjct: 160 TAVIRACLKGGFFKTGLCLFGFV------------------------LKTGYF------- 188
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGD---AYQVFTKMPQRSTVSWTSMIMAFAKQG 331
V + LI M+ + D A +VF KM +++ V+WT MI A+ G
Sbjct: 189 --------DSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYG 240
Query: 332 LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISP 391
EA+ LF M+ G PD TL ++ C F+ G+ + + + R+ +
Sbjct: 241 YNDEAIDLFLEMLVSS----GYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLD 296
Query: 392 RIEHYGC-MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
GC +VD+ ++ G + EA + + M + N W AL+ G
Sbjct: 297 LC--VGCSLVDMYAKCGLVQEARKVFDGMR-EHNVMSWTALVNG 337
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/463 (31%), Positives = 228/463 (49%), Gaps = 14/463 (3%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LL Y + + A ++F ++ WN II +AR + +++M +P+
Sbjct: 144 LLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPD 203
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
+T+S L+SAC G +H V+ G+ + + V ++++FYA A VF+
Sbjct: 204 QWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFN 263
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
G + VSWN+I+ ++ GD A F + P +N+VSWT+MI G + G ALSL
Sbjct: 264 SGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSL 323
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F +M+R + L G+ +H + + + N+LI
Sbjct: 324 FLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVH-----SCIIHLGLDKYLFVGNSLI 378
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
+MYA CG I + + + VSW SM+ AF G G EA+ +F+ MV+ GV
Sbjct: 379 NMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVA-----SGV 433
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
RPD +T +L C H G +DEG F SM+ +G+ ++H CMVD+L R G++ EA
Sbjct: 434 RPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQ 493
Query: 414 GLIENMPLKPNDALWGA--LLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY 471
L D LLG C H + S V + V L+ GY VLLSN+Y
Sbjct: 494 SLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSV-GEYVKNLEPKKEVGY-VLLSNMY 551
Query: 472 AFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
+ +W++ VR++M++ GVKK PG SWI+I VV FV+G+
Sbjct: 552 CASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGN 594
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 154/351 (43%), Gaps = 42/351 (11%)
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSF 119
S ++ HA KLF + T WN ++ Y+R ++ + + M ++++P+ F+YS
Sbjct: 18 SGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSA 77
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
+++C +R G ++H +V+V GY S++ V LI+ Y AR VFD M +
Sbjct: 78 AINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSN 137
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
V+W S+L Y + FD A +F MP + ++W +IA A+ G + L LF EM
Sbjct: 138 EVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCE 197
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
+ + G +H + V ++ ++ +NN+++ YA
Sbjct: 198 NLYQPDQWTFSALMSACTESMESLHGCMMHCF-----VIKSGWSTAMEVNNSIVSFYAKL 252
Query: 300 GVIGDAYQVFT-------------------------------KMPQRSTVSWTSMIMAFA 328
GDA +VF + P+++ VSWTSMI+ +
Sbjct: 253 ECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYT 312
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI 379
+ G G AL LF M + +D + A VL AC + G+ +
Sbjct: 313 RNGNGDLALSLFLDMKRNSFQLDDLVAGA-----VLHACASLAILVHGKMV 358
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGY----- 89
+H V+ +G S + ++SFY + A K+F++ + WN II +
Sbjct: 226 MHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGD 285
Query: 90 ------ARSHTPWKSVECYRQMVS---------------TEAEPNGFTYSFL-----LSA 123
A P K++ + M+ + + N F L L A
Sbjct: 286 TQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHA 345
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
C +L G+ VH ++ G +FV +LIN YA G +E ++ G+ + +VSW
Sbjct: 346 CASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSW 405
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
NS+L + G + A +F EM V V++T ++ C+ G + + F M
Sbjct: 406 NSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSM 463
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 244/495 (49%), Gaps = 27/495 (5%)
Query: 22 LLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL++C++ + + +H++ + G I T +++ Y + A K+F + +
Sbjct: 57 LLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERN 116
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I GY R+ ++ + +M P S+ + + GG R G+ +
Sbjct: 117 VVTWNAMIGGYLRNGDAKSALLAFEEM------PGKTRVSW---SQMIGGFARNGDTLTA 167
Query: 139 IVL---VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
V +V + T +++ YA +G +E AR VF+ M +R+ W+S++ GY GD
Sbjct: 168 RKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGD 227
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A +F +P+RN+ W +MIAG Q G ++AL FGEM E
Sbjct: 228 VMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSA 287
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
GDL G+ +H ++ + +A NQ S LI MYA CG + +A VF +R
Sbjct: 288 CAQLGDLDAGKQMHHMIECKGIAVNQFVLS-----GLIDMYAKCGDLVNARLVFESCNER 342
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ W +MI FA G E L M +R DA+T I VL AC H G + E
Sbjct: 343 NVFCWNAMIAGFAVNGQCNEVLEYLDRMQE-----SNIRLDAVTFITVLSACAHGGLMSE 397
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ + M +GI I HYGCMVDLL RAG L EA+ LI+ MP+KPN+ + GA++G C
Sbjct: 398 ALEVISKMEE-YGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGAC 456
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
IH + ++A V K++ + VLLSNIYA +++W+ +R M++ G +K
Sbjct: 457 WIHSDMKMAEQVM-KMIGADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKI 515
Query: 496 PGQSWIQINGVVHDF 510
PG S I ++ D
Sbjct: 516 PGYSSIILSNSAVDL 530
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 165/363 (45%), Gaps = 20/363 (5%)
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
NPS W+H IR + + K + + + LL AC L +
Sbjct: 15 NPSN--WSHSIRNNSTNQASLKRALVLYKQTRHDTTHDPTVIPQLLKACDSHPFLPYVKS 72
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + G +VF+ T ++ YA G V AR VFD M +R+VV+WN+++ GY+ GD
Sbjct: 73 LHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGD 132
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A F+EMP + VSW+ MI G A+ G A F ++ +
Sbjct: 133 AKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKD--VVIWTVMVDG 190
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
G+++ R + + +R + + ++++ Y G + +A +F ++P R
Sbjct: 191 YAKKGEMEDAREVFELMPER---------NYFVWSSMVCGYCKKGDVMEAEAIFRRIPVR 241
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ W SMI + + G G++AL F M GVDG PD T++ VL AC G +D
Sbjct: 242 NLEIWNSMIAGYVQNGCGEKALEAFGEM-----GVDGFEPDEFTVVSVLSACAQLGDLDA 296
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G+++ M GI+ ++D+ ++ G L A + E+ + N W A++ G
Sbjct: 297 GKQMH-HMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNER-NVFCWNAMIAGF 354
Query: 436 QIH 438
++
Sbjct: 355 AVN 357
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 197/368 (53%), Gaps = 16/368 (4%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM----RR 239
N+++ Y S G D A ++FDEM R++VSW+T+I+ + +ALS+F +M R
Sbjct: 116 NALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRD 175
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
R G ++LG W+H ++ + + +V L ALI+MY+ C
Sbjct: 176 IRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVM-----TVPLGTALINMYSRC 230
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G+I + +VF +MP+R+ V+WT++I A G +EAL +F M G ++PD
Sbjct: 231 GLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESG-----LKPDGAL 285
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
I VL AC H G V++G R+F SM +GI P +EHYGCMVDLL RAG + EA +E M
Sbjct: 286 FIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEM 345
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
PLKPN +W LLG C H + LA +++ ELD Y VLLSN Y W
Sbjct: 346 PLKPNSVIWRTLLGACVNHNHLGLAEKARERII-ELDPYHDGDY-VLLSNAYGRVGNWGG 403
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
+R M + + K PG S++ I+ VVH+FV+GD H I + L+ II + Y
Sbjct: 404 KAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGY 463
Query: 540 EPDITGAF 547
P+ +
Sbjct: 464 TPNTSSVL 471
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 136/324 (41%), Gaps = 42/324 (12%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+S+ +++C ++ A R + +R + S+ T+I + G A+SLF M
Sbjct: 21 HSLRPFFLTCSNYPAAARYAATVLLRLPTPPDPFSYNTIIKHVSPTG----AISLFSHMH 76
Query: 239 RARVEXXXXXXXXXXXXXXXXGD----LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
R V KLG + +VQ NALI+
Sbjct: 77 RNSVPFDHFTFPLILKHHHHHLLHSLIFKLGFDTNIFVQ----------------NALIN 120
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
Y S G + A ++F +M +R VSW+++I K L EAL +F+ M G +R
Sbjct: 121 AYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQM---QMGHRDIR 177
Query: 355 P--DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
D ++ V+ A G ++ G + + + R GI + ++++ SR G +D +
Sbjct: 178 NWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRM-GIVMTVPLGTALINMYSRCGLIDRS 236
Query: 413 HGLIENMPLKPNDALWGALLGGCQIH-KNSELASVVEPKLVAELDTDGA--AGYLVLLSN 469
+ + MP + N W AL+ G +H ++ E V + L DGA G LV S+
Sbjct: 237 VKVFDEMPER-NVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSH 295
Query: 470 IYAFAKRWQDVIAVRQKMIEMGVK 493
W+ ++R E G+K
Sbjct: 296 GGLVEDGWRVFESMRD---EFGIK 316
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 45/303 (14%)
Query: 44 LSQKTNIITK--LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVEC 101
L TNI + L++ Y + L A KLF + W+ +I +++ P +++
Sbjct: 106 LGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSV 165
Query: 102 YRQMVSTEAE-PNGFTYSFLLS---ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
++QM + N + +LS A G++ G VH ++ G V + T LIN
Sbjct: 166 FQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALIN 225
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
Y+ G ++++ VFD M +R+VV+W + +
Sbjct: 226 MYSRCGLIDRSVKVFDEMPERNVVTWTA-------------------------------L 254
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
I G A GR ++AL +F EM+ + ++ G ++ G W V + +
Sbjct: 255 INGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDG----WRVFESMR 310
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STVSWTSMIMAFAKQ---GLG 333
+P + ++ + G+I +A+ +MP + ++V W +++ A GL
Sbjct: 311 DEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLGLA 370
Query: 334 KEA 336
++A
Sbjct: 371 EKA 373
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 247/515 (47%), Gaps = 48/515 (9%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C NI+ L +Q H V GL + L+ Y ++ A K++S +
Sbjct: 449 SILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEW 508
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
S N +I GYA T +++ +M +P+ T++ L+ C + G Q+H
Sbjct: 509 SVVSMNALIAGYAIKDTK-EAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIH 567
Query: 138 GIVLVKGY-CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
+L G C + F+ T+L+ Y + + +F +
Sbjct: 568 CAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSN------------------- 608
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
++++V WT +I+G Q QAL+L+ EMR +
Sbjct: 609 -----------LKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRAC 657
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-QR 315
L+ G+ IH + ++ S AL+ MYA CG + A +VF ++P ++
Sbjct: 658 ALLSSLQDGQEIHSLIFHTGFDLDELTSS-----ALVDMYAKCGDVKSAAKVFEELPIKK 712
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+SW SMI+ FAK G + AL +F M + V PD +T + VL AC HAG V E
Sbjct: 713 DVISWNSMIVGFAKNGYAERALKVFDEMT-----LSSVSPDDVTFLGVLTACSHAGLVSE 767
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR+IF +M + I PR++H+ CMVDLL R GFL+EA I+ + ++PN +W LLG C
Sbjct: 768 GRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGAC 827
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
IH + + KL+ EL+ ++ Y VLL N++A + W + ++R+ M++ V+K
Sbjct: 828 SIHGDEKRGLRAAEKLI-ELEPQNSSPY-VLLYNMHAGSGHWDEAKSLRRTMVQNEVQKT 885
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
PG SWI ++ + FVA DM+H S I L +
Sbjct: 886 PGCSWIVVDKTTNLFVASDMSHPSSDEISHALKHL 920
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 181/447 (40%), Gaps = 64/447 (14%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI--- 74
T L SC ++NL +H+ ++ NG T + L+ FY L A LF+++
Sbjct: 77 TTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVSRL 136
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
DN T + +I GY R +++ + +M S GF L+ V + G+
Sbjct: 137 DNLDTATFTALIGGYVRVGMFDDALQLFDEMQS------GFVLDELVIVTVLNACVNLGK 190
Query: 135 QVHGIVLVKGY--CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
H L C NV +I+ + RG ++A + M V+S S LA +S
Sbjct: 191 LDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLS 250
Query: 193 ---------------------------------------CGDFDGARRVFDEMPIRNVVS 213
C A++VFD + RNVV
Sbjct: 251 AVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVM 310
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W T++ AQ G + LF EM + L +GR +H +
Sbjct: 311 WNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTII 370
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
++ N + +NNAL+ MYA G + +A + F +M R +SW ++++ + ++
Sbjct: 371 KKRFTDN-----LCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEE 425
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
EA +F+ M GV PD + + +L AC + ++ G + F ++ G+ +
Sbjct: 426 TEAFNMFRRM-----NRHGVVPDEVCMASILSACGNIKVLEAGLQ-FHGLSVKLGLDTNL 479
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMP 420
++D+ S+ G +++A + MP
Sbjct: 480 FAGSSLIDMYSKCGGIEDARKIYSCMP 506
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 179/405 (44%), Gaps = 52/405 (12%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H + V G + + L++ Y + L A K+F + + + +WN I+ YA++
Sbjct: 264 VHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGC 323
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+E + +M+ +P+ FTYS +LS+C L G Q+H ++ K + N+ V
Sbjct: 324 LSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNA 383
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD----FDGARRVFDEMPIRN 210
L++ YA G +++AR F+ M R +SWN+IL GYV + F+ RR+ + +
Sbjct: 384 LVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPD 443
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
V ++++ C + L G +KLG +
Sbjct: 444 EVCMASILSACGNIKVLEAGLQFHGL------------------------SVKLGLDTNL 479
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
+ ++LI MY+ CG I DA ++++ MP+ S VS ++I +A +
Sbjct: 480 FA----------------GSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIK 523
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
KEA+ L M + G++P IT ++ C + V G +I ++ + G+
Sbjct: 524 D-TKEAINLLHEM-----QILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKN-GLL 576
Query: 391 PRIEHYGC-MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
E G ++ + + L E + L + + LW AL+ G
Sbjct: 577 CGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISG 621
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 174/406 (42%), Gaps = 51/406 (12%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+HS ++ + + L+ Y + L+ A K F + WN I+ GY +
Sbjct: 364 QLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEE 423
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ +R+M P+ + +LSAC +L G Q HG+ + G +N+F +
Sbjct: 424 EETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGS 483
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-- 211
+LI+ Y+ GG+E AR ++ M + SVVS N+++AGY + D A + EM I +
Sbjct: 484 SLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGY-AIKDTKEAINLLHEMQILGLKP 542
Query: 212 --VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+++ ++I C + + + LG IH
Sbjct: 543 SEITFASLIDCCKESPK-----------------------------------VILGMQIH 567
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFA 328
I+ S L +L+ MY + + +F+++ +S V WT++I
Sbjct: 568 C----AILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHT 623
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
+ +AL L++ M + + PD T + VL AC + +G+ I + + T G
Sbjct: 624 QNDCSDQALNLYREMRD-----NNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHT-G 677
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+VD+ ++ G + A + E +P+K + W +++ G
Sbjct: 678 FDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVG 723
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 175/397 (44%), Gaps = 67/397 (16%)
Query: 89 YARSHTPWKSVEC---YRQMVSTEAE-PNGFT-----YSFLLSACVRGGLLREGEQVHGI 139
++ +H P ++V ++ST + P +T +S LS+C + L G VH
Sbjct: 38 HSNTHLPLQTVTTNSNSNSLISTYSRLPQTYTSLINSFSTTLSSCTKLENLEFGTSVHTS 97
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG---MGQRSVVSWNSILAGYVSCGDF 196
++ G+ S+ + +LI+FYA + AR +F+ + ++ +++ GYV G F
Sbjct: 98 IIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVSRLDNLDTATFTALIGGYVRVGMF 157
Query: 197 DGARRVFDEMP-----------------------------------IRNVVSWTTMIAGC 221
D A ++FDEM NVV+W MI+G
Sbjct: 158 DDALQLFDEMQSGFVLDELVIVTVLNACVNLGKLDHACELFDEMDGCGNVVAWNVMISGH 217
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
++G K+A+ + +MR V GDL G +H +
Sbjct: 218 GKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGE-----AVKLG 272
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
+ SV + ++LI+MY C ++ DA +VF + R+ V W +++ +A+ G + + LF
Sbjct: 273 FESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFS 332
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC--- 398
M+ G G D PD T +L +C F+D GR++ +++ I R C
Sbjct: 333 EMM--GCGND---PDEFTYSSILSSCACFDFLDIGRQLHSTI-----IKKRFTDNLCVNN 382
Query: 399 -MVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+VD+ ++AG L EA E M + N + W A+L G
Sbjct: 383 ALVDMYAKAGALKEARKQFERMKYRDNIS-WNAILVG 418
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 246/514 (47%), Gaps = 49/514 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT--VWNHIIRGYARS 92
IH + GL + T LL Y S L+ A ++F D S ++N +I G+ R
Sbjct: 170 IHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRG 229
Query: 93 ----HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
++V + +M + + FT+S ++ ACV G G Q+HG VL +
Sbjct: 230 GLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGD 289
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
FV ++L++ Y+ G ++ DG+ R F+ P
Sbjct: 290 EFVASSLVDLYSFFGEID------DGL-------------------------RCFEMTPK 318
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+VVSWT+ IAGC + G+ + LSLF + + G I
Sbjct: 319 LDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI 378
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
Y + VA + N I MYA G I A F + + VSW+ MI ++A
Sbjct: 379 QGYALKFGVA-----DFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYA 433
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
+ G KE+L LF+ M V G+ P+ ITL+ VL AC H G VDEG + +M + +G
Sbjct: 434 QHGFAKESLRLFELMT-----VSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYG 488
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
++ ++H C+VDLL RAG L+EA I + + + LW ALLG C++HK++E+ +
Sbjct: 489 MAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIA 548
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
K++ EL+ AA Y VLL N+Y + + + VR+ M + GVKK PG SWI++ VH
Sbjct: 549 DKVI-ELEPHEAASY-VLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVH 606
Query: 509 DFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
F+ D +H S IY L E++ + S++ +
Sbjct: 607 TFLVDDRSHPISELIYSRLGELLAKIKEISFDNE 640
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 178/461 (38%), Gaps = 83/461 (18%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTN-IITKLLSFYIASDQLQHAHKLFSTIDN 76
TLL C +NL IH+ +++NG KT+ + L++ Y +Q+Q + LF
Sbjct: 46 TLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSI 105
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYR---QMVSTEAEPNGFTYSFLLSAC---VRGGLL 130
WN II YA+ T E ++ +M + +T S +L+AC V
Sbjct: 106 KDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCF 165
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV--VSWNSILA 188
G +HG + G NV V T L++ YA G + A VF+G +S +N+++A
Sbjct: 166 Y-GRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G++ G C + R +A+ +F EMRR V+
Sbjct: 225 GFLRGG-------------------------LCCENAR--EAVRVFNEMRRMGVKCSKFT 257
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
GD ++GR IH V +N + + ++L+ +Y+ G I D +
Sbjct: 258 FSSVVKACVGNGDFEVGRQIHGQ-----VLKNSLEGDEFVASSLVDLYSFFGEIDDGLRC 312
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD----------------- 351
F P+ VSWTS I K G + L LF ++DG +D
Sbjct: 313 FEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAA 372
Query: 352 -------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC 398
GV + +C +G +D R F + P + +
Sbjct: 373 RTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK-----PDVVSWSV 427
Query: 399 MVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQ 436
M+ ++ GF E+ L E M + PN +L C
Sbjct: 428 MICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACS 468
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH QV+ N L + + L+ Y ++ + F W I G ++
Sbjct: 276 QIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNG 335
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ + + ++ + + F S ++ AC R GEQ+ G L G V+
Sbjct: 336 KFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKN 395
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
I YA G ++ AR+ F + VVSW+ ++ Y G + R+F+ M +
Sbjct: 396 TQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVP 455
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N ++ ++ C+ G + L + M++
Sbjct: 456 NQITLLGVLTACSHGGLVDEGLGYYETMKK 485
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 238/527 (45%), Gaps = 56/527 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+IH V+ S+ ++ L+ Y + ++ A K+FS + +W +I GY +
Sbjct: 322 EIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNL 381
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K++E Y+ M + P+ T +LSAC L G +H G V V
Sbjct: 382 MHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVAN 441
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
LI+ YA C D A VF + +N++S
Sbjct: 442 KLIDMYA-------------------------------KCKCIDKALEVFHSIRDKNIIS 470
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT++I G RC AL F EM R R + G G+ IH Y
Sbjct: 471 WTSIILGLRINNRCYDALFFFKEMMR-RQKPNWVTLVCVLSACARIGAFTCGKEIHAYAL 529
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ V+ + P NA++ MY CG + A++ F + Q + +W ++ +A++G G
Sbjct: 530 RTGVSDDGYMP-----NAVLDMYVRCGRMEYAWKQFFSIDQDVS-TWNILLTGYAERGKG 583
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
A LF+ M+ V P+ +T I +LCAC +G V EG + SM + I P +
Sbjct: 584 TLATELFRRMLESN-----VVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNL 638
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY C+VDLL RAG L++A+ I+ +P+KP+ A+WGALL C+IH+ EL + +
Sbjct: 639 KHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELGELAAKNIFH 698
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
D + GY +LLSN+YA W V VR+ M + G+ PG SW++ G VH F++G
Sbjct: 699 --DDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWVENKGTVHAFLSG 756
Query: 514 DMTHKHSYFIYEILSEIIKQ-----------SHVDSYEPDITGAFLG 549
D H I +L ++ SH+D E F G
Sbjct: 757 DNFHPQIKEINALLERFYEKMKEAGIQGPESSHMDIMEASKADIFCG 803
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 47/387 (12%)
Query: 54 LLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
LLS ++ L A +F + + WN ++ GYA+ +++ Y +M+ P+
Sbjct: 140 LLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPD 199
Query: 114 GFTYSFLLSACVRGGL--LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
+T+ +L C GG+ L +G ++H VL G+ S+V V LI YA
Sbjct: 200 VYTFPCVLRTC--GGVPDLVKGREIHVHVLRFGFESDVDVINALITMYA----------- 246
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
CGD D AR VFD+MP ++ +SW MIAGC + G C + L
Sbjct: 247 --------------------KCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGL 286
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
+LF M V+ GD +LGR IH YV + +R+ PSV N+
Sbjct: 287 TLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRD---PSVY--NS 341
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
LI MY+S G++ +A +VF++ R V WT+MI + + ++AL +K M + +
Sbjct: 342 LIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEA-----E 396
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
G+ PD IT+ VVL AC +D G + +T G+ + ++D+ ++ +D+
Sbjct: 397 GIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKT-GLIFYVIVANKLIDMYAKCKCIDK 455
Query: 412 AHGLIENMPLKPNDALWGALLGGCQIH 438
A + ++ K N W +++ G +I+
Sbjct: 456 ALEVFHSIRDK-NIISWTSIILGLRIN 481
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 174/426 (40%), Gaps = 51/426 (11%)
Query: 15 IQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
++ V+T +L++C + +L+ +IH V+ G ++I L++ Y + A
Sbjct: 196 VRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTAR 255
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
+F + WN +I G + + + + +M+ +P+ T + +++AC G
Sbjct: 256 LVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIG 315
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
R G ++HG V+ + + V +LI Y+ G VE+A VF R VV W ++++
Sbjct: 316 DERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMIS 375
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
GY + A + M ++ I C
Sbjct: 376 GYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSC--------------------- 414
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
DL G +H ++ + V + N LI MYA C I A +V
Sbjct: 415 ----------LCDLDTGMNLHEKAKKTGLIF-----YVIVANKLIDMYAKCKCIDKALEV 459
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F + ++ +SWTS+I+ +AL FK M+ +P+ +TL+ VL AC
Sbjct: 460 FHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQ------KPNWVTLVCVLSACA 513
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
G G+ I A RT G+S ++D+ R G ++ A + + + + W
Sbjct: 514 RIGAFTCGKEIHAYALRT-GVSDDGYMPNAVLDMYVRCGRMEYAWK--QFFSIDQDVSTW 570
Query: 429 GALLGG 434
LL G
Sbjct: 571 NILLTG 576
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 118/261 (45%), Gaps = 14/261 (5%)
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
M SV N +L+ +V G+ A VF MP RN+ SW ++ G A+ G +AL+L+
Sbjct: 129 MTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLY 188
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
M V DL GR IH +V R + V + NALI
Sbjct: 189 DRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHV-----LRFGFESDVDVINALIT 243
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MYA CG I A VF KMP++ +SW +MI + G E L LF M+ V
Sbjct: 244 MYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIE-----YPVD 298
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRT-WGISPRIEHYGCMVDLLSRAGFLDEAH 413
PD +T+ V+ AC G GR I + RT + P + Y ++ + S G ++EA
Sbjct: 299 PDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSV--YNSLIQMYSSVGLVEEAE 356
Query: 414 GLIENMPLKPNDALWGALLGG 434
+ + + +W A++ G
Sbjct: 357 KVFSQTECR-DVVMWTAMISG 376
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 285 SVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
SV+L N L+ M+ G + DA+ VF +MP+R+ SW ++ +AK G EAL L+ M+
Sbjct: 133 SVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRML 192
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
GVRPD T VL C + +GR I + R +G ++ ++ + +
Sbjct: 193 W-----VGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLR-FGFESDVDVINALITMYA 246
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ G +D A + + MP K + W A++ GC
Sbjct: 247 KCGDIDTARLVFDKMP-KKDRISWNAMIAGC 276
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 9/224 (4%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L +C+ + +L + +H + GL + KL+ Y + A ++F +I + +
Sbjct: 408 VLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKN 467
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W II G ++ + ++ +++M+ + +PN T +LSAC R G G+++H
Sbjct: 468 IISWTSIILGLRINNRCYDALFFFKEMMRRQ-KPNWVTLVCVLSACARIGAFTCGKEIHA 526
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
L G + ++ +++ Y G +E A F + Q V +WN +L GY G
Sbjct: 527 YALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQ-DVSTWNILLTGYAERGKGTL 585
Query: 199 A----RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
A RR+ + + N V++ +++ C++ G + L + M+
Sbjct: 586 ATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMK 629
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 210/416 (50%), Gaps = 42/416 (10%)
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G QVHG V+ G+ S+ V+ +L+ Y + A+ +F MG+ V SW ++ GY
Sbjct: 2 GMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFK 61
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
CGD D AR++FD MP++N+V+W+TMI G + +A+ +F + E
Sbjct: 62 CGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILID---EGLVANEVGA 118
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G L G + + R +V L A++ MYA CG + A +VF +M
Sbjct: 119 VSACAHLGALAAGEKAYEHA-----IRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEM 173
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
++ +SWTS+I A G +EAL F MV +G + P IT VL A H G
Sbjct: 174 KEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNG-----IVPRDITFTAVLKAYSHGGL 228
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
V++G+ IF SM R + + PR+EHYGCMVDLL RAG L+EA I MP+KPN
Sbjct: 229 VEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPN-------- 280
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
+ ++P+ +GY LLSNIYA +W+D +R+ M E GV
Sbjct: 281 ------------APMKPE---------HSGYYALLSNIYARTNKWKDATVMRRLMKEKGV 319
Query: 493 KKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAFL 548
+K PG S I+I+G H+F G+ H I + +I+++ + Y + + A
Sbjct: 320 RKQPGYSLIEIDGKTHEFTIGNKRHPEIDKIERMWEKILQKIKLAGYMGNTSEALF 375
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+H QVV G ++ L+ Y L A +F + W +I+GY +
Sbjct: 3 MQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFKC 62
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN---- 148
V+ R++ N T+S +++ +R + ++ I++ +G +N
Sbjct: 63 ----GDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEVGA 118
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
V +L AG E A + + +V+ +I+ Y CG+ + A RVF+EM
Sbjct: 119 VSACAHLGALAAGEKAYEHAIRINLDL---NVILGTAIVDMYARCGNVEKAVRVFEEMKE 175
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLF 234
++V+SWT++I+G A G ++AL F
Sbjct: 176 KDVISWTSLISGVAMHGYAEEALEYF 201
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T ++ Y + A KLF + + W+ +I GY R++ K+VE + ++
Sbjct: 53 TCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLV 112
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
N +SAC G L GE+ + + NV + T +++ YA G VE+A V
Sbjct: 113 ANEVG---AVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRV 169
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV----SWTTMIAGCAQKGRC 227
F+ M ++ V+SW S+++G G + A F M +V ++T ++ + G
Sbjct: 170 FEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLV 229
Query: 228 KQALSLFGEMRR 239
++ +F M+R
Sbjct: 230 EKGQEIFESMKR 241
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 242/505 (47%), Gaps = 49/505 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT--VWNHIIRGYARS 92
IH + GL + T LL Y S L+ A ++F D S ++N +I G+ R
Sbjct: 170 IHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRG 229
Query: 93 ----HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
++V + +M + + FT+S ++ ACV G G Q+HG VL +
Sbjct: 230 GLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGD 289
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
FV ++L++ Y+ G ++ DG+ R F+ P
Sbjct: 290 EFVASSLVDLYSFFGEID------DGL-------------------------RCFEMTPK 318
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
+VVSWT+ IAGC + G+ + LSLF + + G I
Sbjct: 319 LDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI 378
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
Y + VA + N I MYA G I A F + + VSW+ MI ++A
Sbjct: 379 QGYALKFGVA-----DFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYA 433
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
+ G KE+L LF+ M V G+ P+ ITL+ VL AC H G VDEG + +M + +G
Sbjct: 434 QHGFAKESLRLFELMT-----VSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYG 488
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
++ ++H C+VDLL RAG L+EA I + + + LW ALLG C++HK++E+ +
Sbjct: 489 MAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIA 548
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
K++ EL+ AA Y VLL N+Y + + + VR+ M + GVKK PG SWI++ VH
Sbjct: 549 DKVI-ELEPHEAASY-VLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVH 606
Query: 509 DFVAGDMTHKHSYFIYEILSEIIKQ 533
F+ D +H S IY L E++ +
Sbjct: 607 TFLVDDRSHPISELIYSRLGELLAK 631
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 178/461 (38%), Gaps = 83/461 (18%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTN-IITKLLSFYIASDQLQHAHKLFSTIDN 76
TLL C +NL IH+ +++NG KT+ + L++ Y +Q+Q + LF
Sbjct: 46 TLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSI 105
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYR---QMVSTEAEPNGFTYSFLLSAC---VRGGLL 130
WN II YA+ T E ++ +M + +T S +L+AC V
Sbjct: 106 KDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCF 165
Query: 131 REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV--VSWNSILA 188
G +HG + G NV V T L++ YA G + A VF+G +S +N+++A
Sbjct: 166 Y-GRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIA 224
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G++ G C + R +A+ +F EMRR V+
Sbjct: 225 GFLRGG-------------------------LCCENAR--EAVRVFNEMRRMGVKCSKFT 257
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
GD ++GR IH V +N + + ++L+ +Y+ G I D +
Sbjct: 258 FSSVVKACVGNGDFEVGRQIHGQ-----VLKNSLEGDEFVASSLVDLYSFFGEIDDGLRC 312
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD----------------- 351
F P+ VSWTS I K G + L LF ++DG +D
Sbjct: 313 FEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAA 372
Query: 352 -------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGC 398
GV + +C +G +D R F + P + +
Sbjct: 373 RTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK-----PDVVSWSV 427
Query: 399 MVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGCQ 436
M+ ++ GF E+ L E M + PN +L C
Sbjct: 428 MICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACS 468
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH QV+ N L + + L+ Y ++ + F W I G ++
Sbjct: 276 QIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNG 335
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ + + ++ + + F S ++ AC R GEQ+ G L G V+
Sbjct: 336 KFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVVKN 395
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
I YA G ++ AR+ F + VVSW+ ++ Y G + R+F+ M +
Sbjct: 396 TQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVP 455
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N ++ ++ C+ G + L + M++
Sbjct: 456 NQITLLGVLTACSHGGLVDEGLGYYETMKK 485
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ ++ YA +
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A +F+ MP ++V++W
Sbjct: 351 LMDMY-------------------------------MKCFSPEKAVDLFNRMPKKDVIAW 379
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ +H +V +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIK 439
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 440 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 494
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 495 EALKLFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A +I NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 609
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY+ + W +R+ + E + K GQS +++ V F+AGD
Sbjct: 610 LDPNH-AGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGD 668
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 669 RIHDESDHIYEILTKLHAKMREVAFDPQV 697
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 57/423 (13%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
LL++C + ++ Q+HSQ + GL + I+TKL Y + HAHKLF + + +
Sbjct: 10 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 69
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN ++R Y +++ +RQM VS E P+ ++ S L +C L G+ +
Sbjct: 70 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 129
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + ++FV + LI+ Y G + A VF + VV W SI++GY G
Sbjct: 130 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 189
Query: 197 DGARRVFDEMPIRNVVS-----WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
+ A F M + VS ++ + CAQ
Sbjct: 190 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQ---------------------------- 221
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+ KLGR +H +V+ R + L N+L+H+Y G I +A +F +
Sbjct: 222 -------LSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M + +SW++M+ +A G + L LF M+ ++P+ +T++ VL AC
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLD-----KRIKPNWVTVVSVLRACACIS 324
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
++EG +I + +G ++D+ + ++A L MP K + W L
Sbjct: 325 NLEEGMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVL 382
Query: 432 LGG 434
G
Sbjct: 383 FSG 385
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A LF+ +
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVC 432
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 433 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 492
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A ++F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 493 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 32/205 (15%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + +H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 417 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 476
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 477 VVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
I ++N Y + E + D +G+ G+ D
Sbjct: 537 DI---------------MVNKYKLKPNSEHYAIMVDLLGRM---------------GELD 566
Query: 198 GARRVFDEMPIRNVVS-WTTMIAGC 221
A V + MP++ W ++ C
Sbjct: 567 MALDVINNMPMQAGPDIWGALLGAC 591
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
+YA I A+++F + P R+ W +++ ++ +G E L LF+ M + + R
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
PD ++ + L +C + G+ I + + I + ++DL ++ G +++A
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV-RIDGDMFVGSALIDLYTKCGQMNDAVK 163
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+ P KP+ LW +++ G + + ELA ++V
Sbjct: 164 VFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ ++ YA +
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 290
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 291 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A +F+ MP ++V++W
Sbjct: 351 LMDMY-------------------------------MKCFSPEKAVDLFNRMPKKDVIAW 379
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ +H +V +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIK 439
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 440 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 494
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 495 EALKLFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A +I NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 551 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 609
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY+ + W +R+ + E + K GQS +++ V F+AGD
Sbjct: 610 LDPNH-AGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGD 668
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 669 RIHDESDHIYEILTKLHAKMREVAFDPQV 697
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 184/423 (43%), Gaps = 57/423 (13%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
LL++C + ++ Q+HSQ + GL + I+TKL Y + HAHKLF + + +
Sbjct: 10 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYL 69
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN ++R Y +++ +RQM VS E P+ ++ S L +C L G+ +
Sbjct: 70 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 129
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + ++FV + LI+ Y G + A VF + VV W SI++GY G
Sbjct: 130 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 189
Query: 197 DGARRVFDEMPIRNVVS-----WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
+ A F M + VS ++ + CAQ
Sbjct: 190 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQ---------------------------- 221
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+ KLGR +H +V+ R + L N+L+H+Y G I +A +F +
Sbjct: 222 -------LSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 269
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
M + +SW++M+ +A G + L LF M+ ++P+ +T++ VL AC
Sbjct: 270 MSDKDIISWSTMVACYADNGAETDVLDLFNEMLD-----KRIKPNWVTVVSVLRACACIS 324
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
++EG +I + +G ++D+ + ++A L MP K + W L
Sbjct: 325 NLEEGMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVL 382
Query: 432 LGG 434
G
Sbjct: 383 FSG 385
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A LF+ +
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVC 432
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 433 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 492
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A ++F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 493 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 32/205 (15%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + +H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 417 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 476
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 477 VVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
I ++N Y + E + D +G+ G+ D
Sbjct: 537 DI---------------MVNKYKLKPNSEHYAIMVDLLGRM---------------GELD 566
Query: 198 GARRVFDEMPIRNVVS-WTTMIAGC 221
A V + MP++ W ++ C
Sbjct: 567 MALDVINNMPMQAGPDIWGALLGAC 591
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
+YA I A+++F + P R+ W +++ ++ +G E L LF+ M + + R
Sbjct: 45 LYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEER 104
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
PD ++ + L +C + G+ I + + I + ++DL ++ G +++A
Sbjct: 105 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKV-RIDGDMFVGSALIDLYTKCGQMNDAVK 163
Query: 415 LIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+ P KP+ LW +++ G + + ELA ++V
Sbjct: 164 VFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ ++ YA +
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 320
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A +F+ MP ++V++W
Sbjct: 321 LMDMY-------------------------------MKCFSPEKAVDLFNRMPKKDVIAW 349
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ +H +V +
Sbjct: 350 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIK 409
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 410 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 464
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 465 EALKLFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A +I NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 579
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY+ + W +R+ + E + K GQS +++ V F+AGD
Sbjct: 580 LDPN-HAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGD 638
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 639 RIHDESDHIYEILTKLHAKMREVAFDPQV 667
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 49/377 (12%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYS 118
+ HAHKLF + + +WN ++R Y +++ +RQM VS E P+ ++ S
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
L +C L G+ +HG + ++FV + LI+ Y
Sbjct: 82 IALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYT------------------ 123
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
CG + A +VF E P +VV WT++I+G Q G + AL+ F M
Sbjct: 124 -------------KCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 239 RA-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
+ +V + KLGR +H +V+ R + L N+L+H+Y
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYG 225
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
G I +A +F +M + +SW++M+ +A G + L LF M+ ++P+
Sbjct: 226 KTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLD-----KRIKPNW 280
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T++ VL AC ++EG +I + +G ++D+ + ++A L
Sbjct: 281 VTVVSVLRACACISNLEEGMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFN 339
Query: 418 NMPLKPNDALWGALLGG 434
MP K + W L G
Sbjct: 340 RMP-KKDVIAWAVLFSG 355
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNII------TKLLSFYIASDQLQHAHKLFSTIDN 76
L+SC ++ L+ V++G +K I + L+ Y Q+ A K+F
Sbjct: 84 LKSCAGLRKLLL---GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLREGEQ 135
P +W II GY +S +P ++ + +MV +E P+ T + SAC + + G
Sbjct: 141 PDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRS 200
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VHG V KG + + + +L++ Y G ++ A ++F M + ++SW++++A Y
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY----- 255
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A G L LF EM R++
Sbjct: 256 --------------------------ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRA 289
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+L+ G IH + + ++ AL+ MY C A +F +MP++
Sbjct: 290 CACISNLEEGMKIH-----ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 344
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
++W + +A G+ E++ +F+ M+S G RPDAI L+ +L G + +
Sbjct: 345 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT-----RPDAIALVKILTTISELGILQQ 399
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ A + + G ++++ ++ +++A+ + + M K + W +++
Sbjct: 400 AVCLHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAY 457
Query: 436 QIHKNSELA 444
H E A
Sbjct: 458 GFHGQGEEA 466
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A LF+ +
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 343 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVC 402
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 403 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 462
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A ++F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 463 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 509
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 17/247 (6%)
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
S++ ++ + A ++F E P R V W ++ +G + LSLF +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 242 ---VEXXXXXXXXXXXXXXXXG--DLKLGRWIHWYVQQ-RIVARNQQQPSVRLNNALIHM 295
+E G L LG+ IH ++++ RI + + +ALI +
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRI------DGDMFVGSALIDL 121
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y CG + DA +VF + P+ V WTS+I + + G + AL F MV + V P
Sbjct: 122 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVS----EKVSP 177
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D +TL+ V AC GR + + R G+ ++ ++ L + G + A L
Sbjct: 178 DPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNL 236
Query: 416 IENMPLK 422
M K
Sbjct: 237 FREMSDK 243
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 32/205 (15%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + +H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 387 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 446
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 447 VVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 506
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
I ++N Y + E + D +G+ G+ D
Sbjct: 507 DI---------------MVNKYKLKPNSEHYAIMVDLLGR---------------MGELD 536
Query: 198 GARRVFDEMPIRNVVS-WTTMIAGC 221
A V + MP++ W ++ C
Sbjct: 537 MALDVINNMPMQAGPDIWGALLGAC 561
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 239/509 (46%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ ++ YA +
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGA 260
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 261 ETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 320
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A +F+ MP ++V++W
Sbjct: 321 LMDMY-------------------------------MKCFSPEKAVDLFNRMPKKDVIAW 349
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ +H +V +
Sbjct: 350 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIK 409
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 410 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 464
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL LF M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 465 EALKLFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A +I NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 521 HYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 579
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY+ + W +R+ + E + K GQS +++ V F+AGD
Sbjct: 580 LDPN-HAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGD 638
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 639 RIHDESDHIYEILTKLHAKMREVAFDPQV 667
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 162/377 (42%), Gaps = 49/377 (12%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYS 118
+ HAHKLF + + +WN ++R Y +++ +RQM VS E P+ ++ S
Sbjct: 22 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVS 81
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
L +C L G+ +HG + ++FV + LI+ Y
Sbjct: 82 IALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYT------------------ 123
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
CG + A +VF E P +VV WT++I+G Q G + AL+ F M
Sbjct: 124 -------------KCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 239 RA-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
+ +V + KLGR +H +V+ R + L N+L+H+Y
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYG 225
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
G I +A +F +M + +SW++M+ +A G + L LF M+ ++P+
Sbjct: 226 KTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLD-----KRIKPNW 280
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T++ VL AC ++EG +I + +G ++D+ + ++A L
Sbjct: 281 VTVVSVLRACACISNLEEGMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFN 339
Query: 418 NMPLKPNDALWGALLGG 434
MP K + W L G
Sbjct: 340 RMP-KKDVIAWAVLFSG 355
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNII------TKLLSFYIASDQLQHAHKLFSTIDN 76
L+SC ++ L+ V++G +K I + L+ Y Q+ A K+F
Sbjct: 84 LKSCAGLRKLLL---GKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLREGEQ 135
P +W II GY +S +P ++ + +MV +E P+ T + SAC + + G
Sbjct: 141 PDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRS 200
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VHG V KG + + + +L++ Y G ++ A ++F M + ++SW++++A Y
Sbjct: 201 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACY----- 255
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
A G L LF EM R++
Sbjct: 256 --------------------------ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRA 289
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+L+ G IH + + ++ AL+ MY C A +F +MP++
Sbjct: 290 CACISNLEEGMKIH-----ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK 344
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
++W + +A G+ E++ +F+ M+S G RPDAI L+ +L G + +
Sbjct: 345 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT-----RPDAIALVKILTTISELGILQQ 399
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
+ A + + G ++++ ++ +++A+ + + M K + W +++
Sbjct: 400 AVCLHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAY 457
Query: 436 QIHKNSELA 444
H E A
Sbjct: 458 GFHGQGEEA 466
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A LF+ +
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 343 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVC 402
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 403 LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 462
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A ++F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 463 GEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 509
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 17/247 (6%)
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
S++ ++ + A ++F E P R V W ++ +G + LSLF +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 242 ---VEXXXXXXXXXXXXXXXXG--DLKLGRWIHWYVQQ-RIVARNQQQPSVRLNNALIHM 295
+E G L LG+ IH ++++ RI + + +ALI +
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRI------DGDMFVGSALIDL 121
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y CG + DA +VF + P+ V WTS+I + + G + AL F MV + V P
Sbjct: 122 YTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVS----EKVSP 177
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
D +TL+ V AC GR + + R G+ ++ ++ L + G + A L
Sbjct: 178 DPVTLVSVASACAQLSNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNL 236
Query: 416 IENMPLK 422
M K
Sbjct: 237 FREMSDK 243
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 32/205 (15%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + +H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 387 ILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 446
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 447 VVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 506
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
I ++N Y + E + D +G+ G+ D
Sbjct: 507 DI---------------MVNKYKLKPNSEHYAIMVDLLGR---------------MGELD 536
Query: 198 GARRVFDEMPIRNVVS-WTTMIAGC 221
A V + MP++ W ++ C
Sbjct: 537 MALDVINNMPMQAGPDIWGALLGAC 561
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 238/496 (47%), Gaps = 46/496 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+HS VV + L ++ + T LLS Y D L+ A +F + VWN +I Y+ S
Sbjct: 239 LHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGC 298
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
P +S+E MV + P+ FT +S+ + + G+Q+H V+ G V V +
Sbjct: 299 PKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNS 358
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y+ +C D + AR++F + R VVSW
Sbjct: 359 LVDMYS-------------------------------TCADLNSARKIFGLIKDRTVVSW 387
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ MI G A C +ALSLF EM+ + + G L ++H Y
Sbjct: 388 SAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYS-- 445
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT--KMPQRSTVSWTSMIMAFAKQGL 332
+ L +L++ YA CG I A ++F K + V+W SMI A++ G
Sbjct: 446 ---LKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGE 502
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
+ L+ + + V+PD +T + +L AC ++G VD+G+ IF M +G P
Sbjct: 503 WFQCFELYNQI-----KLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPS 557
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHK-NSELASVVEPKL 451
EH CMVDLL RAG +DEA +IE L + ++G LL C++H ++ A + KL
Sbjct: 558 KEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKL 617
Query: 452 VAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFV 511
+ +++ + A Y VLLSNI+A A +W +R + + G+KK PG SW+ ++G H+F
Sbjct: 618 I-KMEPENPANY-VLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFR 675
Query: 512 AGDMTHKHSYFIYEIL 527
D +H S IY +L
Sbjct: 676 VADHSHPRSEDIYSVL 691
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 194/463 (41%), Gaps = 65/463 (14%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
++L C Q L QIH++ L+GL Q +++ +KL+ Y L +HK+FS +NP +
Sbjct: 26 SILNLCTKPQYLQQIHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSI 85
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN-GFTYSFLLSACV---RGGLLREGEQV 136
++N +R K++ Y++MV P+ +S L S GL+
Sbjct: 86 IYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIM---MA 142
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG V+ G + V LI Y G +G+ +R V+
Sbjct: 143 HGHVVKLGMDAFDLVGNTLIELYGFLNG--------NGLVERKSVT-------------- 180
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ W +I + G+ ++ LF MR V+
Sbjct: 181 -------------KLNFWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRAT 227
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
LK+G+ +H +VA N + + +N AL+ MYA + DA +F KMP++
Sbjct: 228 VESNSLKIGKVLH----SLVVASNLCK-ELTVNTALLSMYAKLDSLKDARLMFEKMPEKD 282
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V W MI ++ G KE+L L MV G+RPD T I + + ++ G
Sbjct: 283 VVVWNIMISVYSGSGCPKESLELVYCMVR-----SGIRPDMFTAIPAISSITKLKSIEWG 337
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH---GLIENMPLKPNDALWGALLG 433
+++ A + R G ++ + +VD+ S L+ A GLI++ + W A++
Sbjct: 338 KQLHAQVIRN-GSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVS----WSAMIK 392
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIY-AFAK 475
G +H N A L E+ G LV++ NI AFAK
Sbjct: 393 GYAMHDNCLEA----LSLFIEMKLSGTKVDLVIVINILPAFAK 431
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLI------QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
R I+ +FT + + ++I L Q+H+QV+ NG + ++ L+ Y L
Sbjct: 311 RSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLN 370
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A K+F I + + W+ +I+GYA +++ + +M + + + +L A
Sbjct: 371 SARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFA 430
Query: 126 RGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF--DGMGQRSVVSW 183
+ G L +HG L S ++T+L+N YA G +E AR +F + + +V+W
Sbjct: 431 KIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAW 490
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
NS++ Y + G++ +++++ + V V++ M+ C G + +F EM
Sbjct: 491 NSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEM 548
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 236 bits (602), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 245/531 (46%), Gaps = 60/531 (11%)
Query: 27 NNIQNLIQI-------------HSQVVLNGLSQKTNIITK--LLSFYIASDQLQHAHKLF 71
+N+QN++Q+ H+Q +L G +T+I+T L++ Y + A +F
Sbjct: 57 SNLQNILQLCAKSRSSIAGRACHAQFILVGF--ETDILTSNMLINMYSKCSLVHDARIVF 114
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ S WN +I R +++ + QM+ N FT S +L C +
Sbjct: 115 DEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAIL 174
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
E Q+H + SN FV T L++ YA
Sbjct: 175 ECMQLHAFSIKVSVDSNCFVGTALLHVYA------------------------------- 203
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
C A ++F+ MP N V+W++++AG Q G + AL LF + + E
Sbjct: 204 KCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISS 263
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
L G+ +H I ++ ++ + ++LI MYA CG I +AY VF
Sbjct: 264 AVCACAGLATLIEGKQVH-----AISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQG 318
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
RS V W +MI F + EA+ LF+ M G + PD +T + VL AC H G
Sbjct: 319 EELRSIVLWNAMISGFGRHACALEAMILFEKMQQRG-----LFPDDVTYVSVLNACSHMG 373
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
++G + F M R + P + HY CMVD+L RAG + +A+ LIE MP ++WG+L
Sbjct: 374 LHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSL 433
Query: 432 LGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMG 491
L C+IH N E A + L E++ D A + VLL+NIYA K+W++V R+ + +
Sbjct: 434 LASCRIHGNIEFAEIAAKHLF-EMEPDNAGNH-VLLANIYAANKKWEEVAKTRKLLRDSE 491
Query: 492 VKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
+KK G SWI+I +H F G+ H IY L ++++ +Y+ D
Sbjct: 492 LKKDRGTSWIEIKNKIHSFTVGERNHPLINEIYAKLDSLVEELEKLNYKVD 542
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 246/538 (45%), Gaps = 45/538 (8%)
Query: 12 RRSIQQHVFTL-LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKL 70
R+++ FT L +C N++ L +H+ V+ + I L++ Y + A K+
Sbjct: 548 RKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKV 607
Query: 71 FSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG-L 129
+ WN +I G+A P +++ + M N T LL C+ L
Sbjct: 608 CKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYL 667
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
L+ G +H ++V G+ + +V+++LI YA
Sbjct: 668 LKHGMPIHAHIVVAGFELDTYVQSSLITMYA----------------------------- 698
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
CGD + + +FD + +N +W + + A G ++AL MR V+
Sbjct: 699 --QCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSF 756
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
L G+ +H ++ + ++ + NA + MY CG I D +++
Sbjct: 757 SVALATIGNLTVLDEGQQLHSWIIKLGFELDEY-----VLNATMDMYGKCGEIDDVFRIL 811
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
RS SW +I A A+ G ++A F M+ G ++PD +T + +L AC H
Sbjct: 812 PIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG-----LKPDHVTFVSLLSACSH 866
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G VDEG F+SM +G+ IEH C++DLL R+G L EA G I+ MP+ PN+ +W
Sbjct: 867 GGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWR 926
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
+LL C++H N EL +L EL++ + Y VL SN+ A +RW DV VR++M
Sbjct: 927 SLLAACKVHGNLELGRKAADRLF-ELNSSDDSAY-VLYSNVCASTQRWGDVENVRKQMES 984
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
+KK P SWI++ V F GD H S IY L E+ K + + + PD + A
Sbjct: 985 QSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYAL 1042
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 194/447 (43%), Gaps = 62/447 (13%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+ V + + Q T L++ Y +++A +F + + + WN++I G+ R
Sbjct: 169 LHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGW 228
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG-EQVHGIVLVKGYCSNVFVET 153
K+++ + M P+ + + +++AC R G + EG Q+HG V+ G SNVFV T
Sbjct: 229 YHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGT 288
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
+L++FY G V +A ++F+E+ N+VS
Sbjct: 289 SLLHFYGTHGSVSEAN-------------------------------KLFEEIEEPNIVS 317
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
WT+++ A G K+ L+++ +R + GD +G + +
Sbjct: 318 WTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMG----YQIL 373
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
++ SV + N+LI M+ + + +A +VF M +R T+SW S+I A A G
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+E+LG F M + D IT+ +L AC A + GR + + ++ G+ +
Sbjct: 434 EESLGHFFWMRRTHP-----KTDYITISALLPACGSAQHLKWGRGLHGLITKS-GLESNV 487
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK--- 450
++ + ++AG ++A + MP + I NS +AS VE
Sbjct: 488 CVCNSLLSMYAQAGSSEDAELVFHTMPARD------------LISWNSMMASHVEDGKYS 535
Query: 451 -----LVAELDTDGAAGYLVLLSNIYA 472
LV L T A Y+ + + A
Sbjct: 536 HAILLLVEMLKTRKAMNYVTFTTALSA 562
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 165/402 (41%), Gaps = 47/402 (11%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH VV GL + T LL FY + A+KLF I+ P+ W ++ YA +
Sbjct: 270 QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGY-CSNVFVE 152
+ + YR + G T + ++ C G G Q+ G V+ G S+V V
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+LI+ + VE+A VF+ M +R +SWNSI
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSI-------------------------- 423
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
I A GR +++L F MRR + LK GR +H
Sbjct: 424 -----ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH--- 475
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
++ ++ + +V + N+L+ MYA G DA VF MP R +SW SM+ + + G
Sbjct: 476 --GLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGK 533
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
A+ L M+ ++ V T L AC + E +I + + +
Sbjct: 534 YSHAILLLVEMLKTRKAMNYV-----TFTTALSAC----YNLEKLKIVHAFVIHFAVHHN 584
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ +V + + G +DEA + + MP + + W AL+GG
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKVCKIMPER-DVVTWNALIGG 625
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 177/432 (40%), Gaps = 60/432 (13%)
Query: 34 QIHSQVVLNGL-SQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
QI V+ +GL + ++ L+S + D ++ A ++F+ + T WN II A +
Sbjct: 371 QILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHN 430
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
+S+ + M T + + T S LL AC L+ G +HG++ G SNV V
Sbjct: 431 GRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVC 490
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM----PI 208
+L++ YA G E A VF M R ++SWNS++A +V G + A + EM
Sbjct: 491 NSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA 550
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
N V++TT ++ C + K + I
Sbjct: 551 MNYVTFTTALSACYNLEKLKIVHAFV---------------------------------I 577
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H+ V ++ + N L+ MY G++ +A +V MP+R V+W ++I A
Sbjct: 578 HFAVHHNLI----------IGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHA 627
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF-VDEGRRIFASMNRTW 387
+ F M +G+ + IT++ +L C + + G I A +
Sbjct: 628 DDKDPNATIQAFNLMRR-----EGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHI-VVA 681
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
G ++ + ++ G L+ + + + + K N + W A+ + E A
Sbjct: 682 GFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANK-NSSTWNAIFSANAHYGPGEEA--- 737
Query: 448 EPKLVAELDTDG 459
K +A + DG
Sbjct: 738 -LKFIARMRNDG 748
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G+ +H + + N F L+N Y+ G ++ A+HVFD M R+ SWN++++G+V
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 193 CGDFDGARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
G + A + F M P V++ +M+ C + G +
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIA--SMVTACDRSGCMTEG---------------- 267
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
R IH YV + + N V + +L+H Y + G + +A
Sbjct: 268 ------------------ARQIHGYVVKCGLMSN-----VFVGTSLLHFYGTHGSVSEAN 304
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
++F ++ + + VSWTS+++ +A G KE L +++ + +G G T+ V+
Sbjct: 305 KLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGN-----TMATVIRT 359
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
C G G +I + ++ + + ++ + ++EA + NM
Sbjct: 360 CGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNM 412
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 171/596 (28%), Positives = 268/596 (44%), Gaps = 88/596 (14%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L+ C N ++L +H+ ++ +G S + KL+ YI + A KLF + N
Sbjct: 6 SLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNR 64
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I + +++E Y M+ P+ +T+S + A G+ REG++ H
Sbjct: 65 HIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAH 124
Query: 138 ------GIVLVKGYCS--------------------------NVFVETNLINFYAGRGGV 165
G + G+ + +V + T LI Y G
Sbjct: 125 GLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLD 184
Query: 166 EQARHVFDGM--------------------------------------GQRSVV-SWNSI 186
+A VF+ M G SVV S S+
Sbjct: 185 GEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSL 244
Query: 187 LAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXX 246
L Y C + + +VF+ + + V+WT+ I G Q GR + ALS+F EM R +
Sbjct: 245 LTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNH 304
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
L+ G IH + V N+ ++ ALIH+Y CG + A
Sbjct: 305 FTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK-----FVDAALIHLYGKCGNVEKAR 359
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
VF + + VS +MI A+A+ G G EAL LF+ + G + P+ +T I +L A
Sbjct: 360 SVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLG-----LEPNVVTFISILLA 414
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C +AG V+EG +IF+ + I +HY CM+DLL RA +EA LIE P+
Sbjct: 415 CNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVI 473
Query: 427 LWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQK 486
W LL C+IH E+A K++ + DG G +LL+NIYA A +W +VI ++
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG--GTHILLTNIYASAGKWDNVIEMKSA 531
Query: 487 MIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
++ +KK P SW+ I+ VH F+AGD++H ++ I E+L E+I++ Y PD
Sbjct: 532 GRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPD 587
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 11/246 (4%)
Query: 3 IERFVPASGRRSIQQHVFTL---LQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLS 56
+E F G R I+ + +TL L SC N+ +L+ IH VV GL T LL+
Sbjct: 188 LEVFEDMVGSR-IKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLT 246
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y + ++ + K+F+++ S W I G ++ ++ +R+M+ PN FT
Sbjct: 247 MYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFT 306
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
S +L AC +L GEQ+H + + G N FV+ LI+ Y G VE+AR VFD +
Sbjct: 307 LSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLT 366
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALS 232
+ +VS N+++ Y G A +F+ + NVV++ +++ C G ++
Sbjct: 367 ELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQ 426
Query: 233 LFGEMR 238
+F +R
Sbjct: 427 IFSLIR 432
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 219/430 (50%), Gaps = 51/430 (11%)
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEP----NGFTYSFLLSACV-RGGLLREGEQVH 137
N ++ Y + V ++ ++ ++ + F++ + L AC+ + G+Q+H
Sbjct: 40 NQTLKNYLECNNHTTVVLLFKTLLEQKSPTFNSIDSFSFLYTLKACINKNHSYVLGKQLH 99
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+++ GY S + ++T+L+ YAG G ++FD
Sbjct: 100 SLIIKFGYESIIQLQTSLLKVYAGGG------NLFD------------------------ 129
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A +VFDE+P +N++ WT++I+ + + + L LF M VE
Sbjct: 130 -AHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACA 188
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L++G WIH +V+++ + + LNNALI+MYA CG IG+A ++F +
Sbjct: 189 DAGGLEMGEWIHDFVRRK----QGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDV 244
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+WTSMI+ A G +EAL LF M V P+ +T I VL AC HAG V+EG+
Sbjct: 245 TTWTSMIVGHAVHGEAREALQLFSEMNFI------VSPNDVTFIGVLMACSHAGLVEEGK 298
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
R F SMN +GI PR H+GCMVDL R+G L EA+ I MP+ PN +W LLG C +
Sbjct: 299 RNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLLGACSL 358
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N +LA+ V KL+ LD G G V LSNIYA + W I VR ++ + K G
Sbjct: 359 HGNLKLATEVRDKLI-NLDP-GYVGDSVALSNIYADKEMWDKKIIVRNQIKQ---SKAHG 413
Query: 498 QSWIQINGVV 507
S I++ +V
Sbjct: 414 FSSIEVGSLV 423
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFY 58
L+E+ P ++TL N + + Q+HS ++ G + T LL Y
Sbjct: 62 LLEQKSPTFNSIDSFSFLYTLKACINKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVY 121
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
L AH++F I + W +I Y +H K +E +R M+ EP+ +
Sbjct: 122 AGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLT 181
Query: 119 FLLSACVRGGLLREGEQVHGIVLVK-GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
LSAC G L GE +H V K G ++ + LIN YA G + AR +FD
Sbjct: 182 TALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRN 241
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPI---RNVVSWTTMIAGCAQKGRCKQALSLF 234
+ V +W S++ G+ G+ A ++F EM N V++ ++ C+ G ++ F
Sbjct: 242 KDVTTWTSMIVGHAVHGEAREALQLFSEMNFIVSPNDVTFIGVLMACSHAGLVEEGKRNF 301
Query: 235 GEMRR 239
M
Sbjct: 302 RSMNE 306
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/533 (29%), Positives = 266/533 (49%), Gaps = 59/533 (11%)
Query: 45 SQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
++K+ I+ T ++S YI ++++ A +LF+ + + WN +I GYAR+ ++++ +
Sbjct: 60 AEKSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFG 119
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+M E N +++ +++A G + + E++ + + +V T ++ + G
Sbjct: 120 RM----PERNVVSWNTVMTALAHCGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNG 171
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
V+ AR VFD M R+VVSWN+++AGY G FD A ++F+ MP R++ SW TM+ G Q
Sbjct: 172 RVDDARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQ 231
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL------------------- 264
G +A LF M + V LKL
Sbjct: 232 NGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVT 291
Query: 265 -------------GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G+ IH +++++ Q S + +ALI+MY+ CG A ++F
Sbjct: 292 VLGACSDLAGLPEGQQIH-----QMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDD 346
Query: 312 --MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++W MI A+A G G EA+ LF M G + + +T + +L AC H
Sbjct: 347 GLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELG-----FQANDVTYVGLLTACSH 401
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
AG DEG + F + + + R +HY C++DL RAG LDEA +IE + + + ++WG
Sbjct: 402 AGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWG 461
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
ALL GC +H N+++ +V K V +++ + A YL L SN+YA ++ VR KM +
Sbjct: 462 ALLAGCSVHGNADIGRLVADK-VLKMEPENADTYL-LASNMYASVGMREEAANVRMKMKD 519
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPD 542
G+KK PG SWI + V FV D +H +E+L + ++ V + PD
Sbjct: 520 KGLKKQPGCSWIDVGNTVQVFVVNDKSHSQ----FEMLKISLWKAKVVAKWPD 568
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 24/324 (7%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
Q+ A K+F + + +W +I GY + ++ + + ++ +AE + ++ ++S
Sbjct: 16 QINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRL---DAEKSVIVWTAMVS 72
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
++ + E E++ + V+ NV +I+ YA G ++A +F M +R+VVS
Sbjct: 73 GYIKINRIEEAERLFNEMPVR----NVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVS 128
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
WN+++ CG D A R+F+EM R+VVSWTTM+AG ++ GR A +F M V
Sbjct: 129 WNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNV 188
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
LKL +R+ R+ PS N ++ + G +
Sbjct: 189 VSWNAMIAGYAQNGRFDEALKLF--------ERMPERD--MPSW---NTMVTGFIQNGDL 235
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
A ++F MP+++ ++WT+M+ + + GL +EAL LF M ++ DG++P T +
Sbjct: 236 NRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQAN----DGLKPTTGTFVT 291
Query: 363 VLCACCHAGFVDEGRRIFASMNRT 386
VL AC + EG++I +++T
Sbjct: 292 VLGACSDLAGLPEGQQIHQMISKT 315
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 129/324 (39%), Gaps = 91/324 (28%)
Query: 162 RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD----------------- 204
G + +AR VFD M +R W ++++GY+ CG + AR++FD
Sbjct: 14 EGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSG 73
Query: 205 ---------------EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
EMP+RNVVSW TMI G A+ GR ++A+ LFG M V
Sbjct: 74 YIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNV------- 126
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
+ W N ++ A CG I DA ++F
Sbjct: 127 ------------------VSW-------------------NTVMTALAHCGRIDDAERLF 149
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+M +R VSWT+M+ +K G +A +F M +R + ++ ++
Sbjct: 150 NEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRM--------PIR-NVVSWNAMIAGYAQ 200
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G DE ++F M + + MV + G L+ A L MP K N W
Sbjct: 201 NGRFDEALKLFERMPER-----DMPSWNTMVTGFIQNGDLNRAEKLFHAMP-KKNVITWT 254
Query: 430 ALLGGCQIHKNSELASVVEPKLVA 453
A++ G H SE A + K+ A
Sbjct: 255 AMMTGYVQHGLSEEALKLFNKMQA 278
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFY 58
L + G + T+L +C+++ L QIH + + T +++ L++ Y
Sbjct: 272 LFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMY 331
Query: 59 IASDQLQHAHKLFST--IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
A K+F + WN +I YA +++ + +M + N T
Sbjct: 332 SKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVT 391
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCS-NVFVETNLINFYAGRGGVEQARHVFDGM 175
Y LL+AC GL EG + +L Y T LI+ G +++A ++ +G+
Sbjct: 392 YVGLLTACSHAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGL 451
Query: 176 GQR-SVVSWNSILAGYVSCGDFDGARRVFDEM 206
G+ S+ W ++LAG G+ D R V D++
Sbjct: 452 GKEVSLSVWGALLAGCSVHGNADIGRLVADKV 483
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 243/521 (46%), Gaps = 48/521 (9%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H Q++ G +I T + Y+ + A K+F + +W +I G ++
Sbjct: 290 VHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNEN 349
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
K++ + QM +P+ T + +++AC + G G+ +HG +L +
Sbjct: 350 ADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQ----------- 398
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
+ ++ A H NS++ Y CG D + VFD M R++VSW
Sbjct: 399 -------KLSLDTAAH-------------NSLVTMYAKCGHLDQSYIVFDRMSKRDLVSW 438
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
++AG AQ G +A SLF EMR G L G+WIH +V
Sbjct: 439 NAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFV-- 496
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
RN +P + ++ +L+ MY CG + A + F MP + VSW+++I + G G+
Sbjct: 497 ---IRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGE 553
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
AL L+ + ++P+ + + +L +C H G +D+G I+ SM R +G P +E
Sbjct: 554 TALRLYSKFLETR-----IKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLE 608
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
H+ CMVDLL RAG ++EA+ L + M P + G +L C+ + N EL ++ ++
Sbjct: 609 HHACMVDLLCRAGKVEEAYNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIANDIIKL 668
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
+AG V L++ YA +W+ V V M +G++K PG S+I I+G + F
Sbjct: 669 RPM--SAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFTDH 726
Query: 515 MTHKHSYFIYEILS----EIIKQSHVD-SYEPDITGAFLGC 550
+H I ++ E+ K VD ++E + T + C
Sbjct: 727 NSHPQFLEIVNTMTILREEMNKMEEVDLNFESNHTHYYNIC 767
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 191/456 (41%), Gaps = 58/456 (12%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +LL + + + +H + G N++ +++ Y ++ KLF +D
Sbjct: 173 LLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRD 232
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN ++ YA+ + + ++M EP + +LS V G +R G VHG
Sbjct: 233 VVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHG 292
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+L G+ + +ET+ I Y G + A +F+ + VV W ++++G V + D
Sbjct: 293 QILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADK 352
Query: 199 ARRVFDEM------PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
A VFD+M P + + ++I CAQ
Sbjct: 353 ALAVFDQMFKFGMKP--STETMASVITACAQ----------------------------- 381
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
G LG+ IH Y + R + +N+L+ MYA CG + +Y VF +M
Sbjct: 382 ------LGAFNLGKSIHGY-----ILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRM 430
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+R VSW +++ +A+ G +A LF M S PD+IT++ ++ C G
Sbjct: 431 SKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQ-----TPDSITIVSLVQGCASTGQ 485
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
+ G+ I + R G+ P I +VD+ + G LD A MP + W A++
Sbjct: 486 LHPGKWIHGFVIRN-GLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMP-SQDLVSWSAII 543
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
G H E A + K L+T +++ LS
Sbjct: 544 AGYGYHGKGETALRLYSKF---LETRIKPNHVIFLS 576
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 183/418 (43%), Gaps = 51/418 (12%)
Query: 21 TLLQSCNNIQNLIQI----HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDN 76
+LL++C+ + NL + H +V++NGLS + I + L++FY+ A K+F +
Sbjct: 74 SLLKACSFL-NLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPE 132
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
+ W +I Y++ ++ +RQM +P+ T LLS + + +
Sbjct: 133 RNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVT---LLSLLFGVSEVPYVQCL 189
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + G+ S++ + +++N Y G +E R +F+ M +R VVSWNS+L+ Y GD
Sbjct: 190 HGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDL 249
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
+ M ++ + + L FG + V
Sbjct: 250 CEVLLLLKRMKLQGL----------------EPGLQAFGSVLSVAVS------------- 280
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
GD++LGR +H + R + + I MY G I A+++F + +
Sbjct: 281 --TGDMRLGRLVHGQ-----ILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKD 333
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V WT+MI + +AL +F M G++P T+ V+ AC G + G
Sbjct: 334 VVLWTAMISGLVQNENADKALAVFDQMFK-----FGMKPSTETMASVITACAQLGAFNLG 388
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ I + R +S + +V + ++ G LD+++ + + M K + W A++ G
Sbjct: 389 KSIHGYILRQ-KLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMS-KRDLVSWNAIVAG 444
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 153/373 (41%), Gaps = 52/373 (13%)
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+T +N +I ++ + + Y M++ + +T+ LL AC L G +H
Sbjct: 33 TTHSYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLH 92
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
V+V G ++ ++ ++LINFY G + AR VFD M +R+VV W +++ Y GD
Sbjct: 93 QRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGD-- 150
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
++A SLF +MR ++
Sbjct: 151 -----------------------------VREAFSLFRQMRYEGIQPSSVTLL------- 174
Query: 258 XXGDLKLGRWIHWYVQ--QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L G YVQ + L N+++++Y CG I D ++F M +R
Sbjct: 175 ---SLLFGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRR 231
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
VSW S++ A+A+ G E L L K M + G+ P VL G +
Sbjct: 232 DVVSWNSLLSAYAQIGDLCEVLLLLKRM-----KLQGLEPGLQAFGSVLSVAVSTGDMRL 286
Query: 376 GRRIFASMNR-TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
GR + + R + + IE + + + G ++ A + E L + LW A++ G
Sbjct: 287 GRLVHGQILRGGFVLDAHIE--TSFIVMYLKGGNINVAFKMFER-SLDKDVVLWTAMISG 343
Query: 435 CQIHKNSELASVV 447
++N++ A V
Sbjct: 344 LVQNENADKALAV 356
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 233 bits (595), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 234/509 (45%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ + YA +
Sbjct: 139 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 198
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 199 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 258
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A F+ MP ++V++W
Sbjct: 259 LMDMY-------------------------------MKCFSPEKAVDFFNRMPKKDVIAW 287
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ H +V +
Sbjct: 288 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIK 347
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 348 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 402
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL F M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 403 EALKFFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 458
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A LI NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 459 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 517
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY + W +R+ + E + K GQS +++ V FVAGD
Sbjct: 518 LDANH-AGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGD 576
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 577 RIHDESDHIYEILTKLHAKMREVAFDPQV 605
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 174/426 (40%), Gaps = 47/426 (11%)
Query: 23 LQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L+SC ++ L+ IH + + + + L+ Y Q+ A ++F P
Sbjct: 22 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 81
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+W I+ GY +S +P ++ + +MV +E P+ T + SAC + + G VHG
Sbjct: 82 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHG 141
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V KG + + + +L++ Y G ++ A ++F M + ++SW+++ A Y
Sbjct: 142 FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACY-------- 193
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A G L LF EM R++
Sbjct: 194 -----------------------ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACAC 230
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
+L+ G IH + + ++ AL+ MY C A F +MP++ +
Sbjct: 231 ISNLEEGMKIH-----ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVI 285
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W + +A G+ E++ +F+ M+S G RPDAI L+ +L G + +
Sbjct: 286 AWAVLFSGYADNGMVHESMWVFRNMLSSGT-----RPDAIALVKILTTVSELGILQQAVC 340
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
A + + G ++++ ++ +++A+ + + M K + W +++ H
Sbjct: 341 FHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFH 398
Query: 439 KNSELA 444
E A
Sbjct: 399 GQGEEA 404
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 44/330 (13%)
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
VS E +P+ ++ S L +C L G+ +HG + +++FV + LI+ Y
Sbjct: 7 VSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYT----- 61
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKG 225
CG + A VF E P +VV WT++++G Q G
Sbjct: 62 --------------------------KCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 95
Query: 226 RCKQALSLFGEMRRA-RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQP 284
+ AL+ F M + +V + KLGR +H +V+ R
Sbjct: 96 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVK-----RKGLDN 150
Query: 285 SVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMV 344
+ L N+L+H+Y G I +A +F +M + +SW++M +A G + L LF M+
Sbjct: 151 KLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEML 210
Query: 345 SDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLS 404
++P+ +T++ VL AC ++EG +I + +G ++D+
Sbjct: 211 D-----KRIKPNWVTVVSVLRACACISNLEEGMKIH-ELAVNYGFEMETTVSTALMDMYM 264
Query: 405 RAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ ++A MP K + W L G
Sbjct: 265 KCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 293
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A F+ +
Sbjct: 221 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 280
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 281 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVC 340
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 341 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 400
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A + F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 401 GEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 447
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 325 ILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 384
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 385 VVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 444
Query: 138 GIVLVK 143
I++ K
Sbjct: 445 DIMVNK 450
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 234/509 (45%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ + YA +
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A F+ MP ++V++W
Sbjct: 351 LMDMY-------------------------------MKCFSPEKAVDFFNRMPKKDVIAW 379
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ H +V +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIK 439
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 440 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 494
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL F M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 495 EALKFFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A LI NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 551 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 609
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY + W +R+ + E + K GQS +++ V FVAGD
Sbjct: 610 LDANH-AGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGD 668
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 669 RIHDESDHIYEILTKLHAKMREVAFDPQV 697
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 183/419 (43%), Gaps = 49/419 (11%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
LL++C + ++ Q+HSQ + GL + I+TKL Y + HAHKLF + + +
Sbjct: 10 LLETCCSKLSISQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYL 69
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN ++R Y +++ + QM VS E +P+ ++ S L +C L G+ +
Sbjct: 70 WNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMI 129
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + +++FV + LI+ Y CG
Sbjct: 130 HGFLKKVRIDNDMFVGSALIDLYT-------------------------------KCGQM 158
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEXXXXXXXXXXXX 255
+ A VF E P +VV WT++++G Q G + AL+ F M + +V
Sbjct: 159 NDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 218
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+ KLGR +H +V+ R + L N+L+H+Y G I +A +F +M +
Sbjct: 219 CAQLSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+SW++M +A G + L LF M+ ++P+ +T++ VL AC ++E
Sbjct: 274 DIISWSTMFACYADNGAETDVLDLFIEMLD-----KRIKPNWVTVVSVLRACACISNLEE 328
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G +I + +G ++D+ + ++A MP K + W L G
Sbjct: 329 GMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 385
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A F+ +
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVC 432
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 433 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 492
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A + F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 493 GEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 417 ILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 476
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 477 VVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 138 GIVLVK 143
I++ K
Sbjct: 537 DIMVNK 542
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 234/509 (45%), Gaps = 42/509 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V GL K + LL Y + +++A LF + + W+ + YA +
Sbjct: 231 VHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGA 290
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++ + +M+ +PN T +L AC L EG ++H + + G+ V T
Sbjct: 291 ETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTA 350
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L++ Y + C + A F+ MP ++V++W
Sbjct: 351 LMDMY-------------------------------MKCFSPEKAVDFFNRMPKKDVIAW 379
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+ +G A G +++ +F M + G L+ H +V +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIK 439
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
NQ + +LI +YA C I DA +VF M + V+W+S+I A+ G G+
Sbjct: 440 NGFENNQ-----FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 494
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EAL F M A +P+ +T I +L AC H+G + EG +F M + + P E
Sbjct: 495 EALKFFYQM----ANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HY MVDLL R G LD A LI NMP++ +WGALLG C+IH+N ++ V L +
Sbjct: 551 HYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFS- 609
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
LD + AGY +LLSNIY + W +R+ + E + K GQS +++ V FVAGD
Sbjct: 610 LDANH-AGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGD 668
Query: 515 MTHKHSYFIYEILSEIIKQSHVDSYEPDI 543
H S IYEIL+++ + +++P +
Sbjct: 669 RIHDESDHIYEILTKLHAKMREVAFDPQV 697
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 183/419 (43%), Gaps = 49/419 (11%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
LL++C + ++ Q+HSQ + GL + I+TKL Y + HAHKLF + + +
Sbjct: 10 LLETCCSKLSISQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYL 69
Query: 82 WNHIIRGYARSHTPWKSVECYRQM-----VSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN ++R Y +++ + QM VS E +P+ ++ S L +C L G+ +
Sbjct: 70 WNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMI 129
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG + +++FV + LI+ Y CG
Sbjct: 130 HGFLKKVRIDNDMFVGSALIDLYT-------------------------------KCGQM 158
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA-RVEXXXXXXXXXXXX 255
+ A VF E P +VV WT++++G Q G + AL+ F M + +V
Sbjct: 159 NDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 218
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
+ KLGR +H +V+ R + L N+L+H+Y G I +A +F +M +
Sbjct: 219 CAQLSNFKLGRSVHGFVK-----RKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+SW++M +A G + L LF M+ ++P+ +T++ VL AC ++E
Sbjct: 274 DIISWSTMFACYADNGAETDVLDLFIEMLD-----KRIKPNWVTVVSVLRACACISNLEE 328
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G +I + +G ++D+ + ++A MP K + W L G
Sbjct: 329 GMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDVIAWAVLFSG 385
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 19 VFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L++C I NL ++IH V G +T + T L+ Y+ + A F+ +
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W + GYA + +S+ +R M+S+ P+ +L+ G+L++
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVC 432
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
H V+ G+ +N F+ +LI YA +E A VF GM + VV+W+SI+A Y G
Sbjct: 433 FHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQ 492
Query: 196 FDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ A + F +M N V++ ++++ C+ G K+ +++F M
Sbjct: 493 GEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIM 539
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ T + +Q + H+ V+ NG I L+ Y ++ A+K+F +
Sbjct: 417 ILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKD 476
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
W+ II Y ++++ + QM + ++ +PN T+ +LSAC GL++EG +
Sbjct: 477 VVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 138 GIVLVK 143
I++ K
Sbjct: 537 DIMVNK 542
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 234/493 (47%), Gaps = 50/493 (10%)
Query: 15 IQQHVFTL---LQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
++ + FT LQ+C+ N+ QI+S VV +GL ++ L+ + + +L A
Sbjct: 55 VKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEAL 114
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
++F T T WN ++ GY + V +R M +P+ FT++ L+
Sbjct: 115 QIFETSPIRDTVTWNTMMGGYLEFSSEQIPV-FWRYMNREGVKPDEFTFASALTGLATIS 173
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
L+ G QVH ++ GY ++ V +L++ Y +E+
Sbjct: 174 SLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEE--------------------- 212
Query: 189 GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G+ + FDE+P ++V SWT M GC Q G + AL++ +M++ V+
Sbjct: 213 GF----------KAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFT 262
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
++ G+ H + + V ++NAL+ MYA CG + A+ V
Sbjct: 263 LATALNACACLASMEEGKQFH-----GLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTV 317
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F RS VSWT+MIMA A+ G EAL +F M V P+ IT I VL AC
Sbjct: 318 FRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETS-----VEPNYITFICVLYACS 372
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
GFVDEG + +SM++ +GI P +HY CMV +L RAG + EA LI MP P +W
Sbjct: 373 QGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVW 432
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
LL CQIH + E + + D + + Y VLLSN+ A W V+++R+ M
Sbjct: 433 QTLLSACQIHGDVETGKLAAEHAIKH-DKNDPSSY-VLLSNMLAETSNWDCVVSLRELME 490
Query: 489 EMGVKKPPGQSWI 501
VKK PG SWI
Sbjct: 491 TRNVKKVPGSSWI 503
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 137/357 (38%), Gaps = 44/357 (12%)
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE-AEPNGF 115
YI L A +LF + + W+ ++ G + ++ + M +PN F
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
T+ L AC + + Q++ +V+ G NVF+
Sbjct: 61 TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFL------------------------ 96
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
N+ L V G A ++F+ PIR+ V+W TM+ G + +Q +
Sbjct: 97 -------LNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSS-EQIPVFWR 148
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
M R V+ LK+G +H + R+ + + N+L+ M
Sbjct: 149 YMNREGVKPDEFTFASALTGLATISSLKMGMQVH-----AQLVRSGYGDDICVGNSLVDM 203
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y + + ++ F ++P + SWT M + G + AL + M GV+P
Sbjct: 204 YLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKK-----MGVKP 258
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
+ TL L AC ++EG++ F + G + ++D+ ++ G +D A
Sbjct: 259 NKFTLATALNACACLASMEEGKQ-FHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSA 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MY C + A Q+F +MP+R+ VSW+S++ G +AL LF M +G V+
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGF----VK 56
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
P+ T + L AC + V + +I++ + R+ G+ + + L R G L EA
Sbjct: 57 PNEFTFVSALQACSLSENVTQAYQIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQ 115
Query: 415 LIENMPLKPNDALWGALLGG 434
+ E P++ + W ++GG
Sbjct: 116 IFETSPIR-DTVTWNTMMGG 134
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 232 bits (592), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/511 (29%), Positives = 244/511 (47%), Gaps = 44/511 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V+ G+ ++T L+ Y + A +F+ + + S WN +I G ++
Sbjct: 261 VHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGM 320
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+S + ++V + + T L+ C + L G+ +H ++ KG SN+ + T
Sbjct: 321 VPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTA 380
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
+++ Y+ G ++Q A VF M RNV++W
Sbjct: 381 IVDMYSKCGAIKQ-------------------------------ASDVFRTMEKRNVITW 409
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T M+ G +Q G + AL LF M+ V G LK GR +H ++ +
Sbjct: 410 TAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIR 469
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK-MPQRSTVSWTSMIMAFAKQGLG 333
N S ALI MYA CG I A ++F + + SMIM + G G
Sbjct: 470 HGYEFNAVNMS-----ALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQG 524
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+AL ++ M+ + ++P+ T + +L AC H+G V+EGR +F M R I P
Sbjct: 525 HQALRVYDRMIDER-----LKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKPSD 579
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
+HY C VDLLSRAG+L+EA+ L++ +P++P+ + ALLGGC+IHKN + + +L++
Sbjct: 580 KHYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGCRIHKNINMGIQIADRLIS 639
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
LD Y V+LSNIY+ A+RW+ V +R M + G+KK P S ++ V F AG
Sbjct: 640 -LDYLNTGIY-VMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTFFAG 697
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
D +H I ++L + + Y D +
Sbjct: 698 DDSHPGWENIKQLLENLRLEVEASGYVADTS 728
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 199/458 (43%), Gaps = 48/458 (10%)
Query: 3 IERFVPASGRRSIQQHVFTL---LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLS 56
+ + G R I+ + +T L++C + + +++ V G ++ + +++
Sbjct: 122 VPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMIN 181
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
F + L A +F + WN II GY + + ++ + +M+S P+ T
Sbjct: 182 FLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVT 241
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ +L AC G + G VH VL G +VFV T+L++ Y G E A VF+ M
Sbjct: 242 MASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMC 301
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
RS++SWN+ MI+GC Q G ++ SLF +
Sbjct: 302 SRSLISWNA-------------------------------MISGCVQNGMVPESFSLFHK 330
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
+ ++ DL+ G+ +H + R + ++ L+ A++ MY
Sbjct: 331 LVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLH-----ACIIRKGLESNLVLSTAIVDMY 385
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ CG I A VF M +R+ ++WT+M++ ++ G + AL LF M + V +
Sbjct: 386 SKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQE-----ENVAAN 440
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
++TL+ ++ C H G + +GR + + R G + ++D+ ++ G + A L
Sbjct: 441 SVTLVSLVHCCAHLGSLKKGRSVHGHLIR-HGYEFNAVNMSALIDMYAKCGKIHSAEKLF 499
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
N + L +++ G +H A V +++ E
Sbjct: 500 YNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDE 537
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 180/408 (44%), Gaps = 43/408 (10%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHII 86
N + ++ IH+Q++ N S + + TKL+ Y L +A+K+F + T + N ++
Sbjct: 51 NTLIDVKSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMM 110
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
G+ ++ + + ++ M + E N +T F L AC G ++ + + KG+
Sbjct: 111 GGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFH 170
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
+ V +++INF G + AR VFDGM +R VV WNSI+ GYV
Sbjct: 171 LHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYV--------------- 215
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
Q+G K+ + LF EM + G KLG
Sbjct: 216 ----------------QEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGT 259
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+H +V + + V + +L+ MY + G A+ VF +M RS +SW +MI
Sbjct: 260 CVHVFVLALGMGDD-----VFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISG 314
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+ G+ E+ LF +V G G D+ TL+ ++ C ++ G+ + A + R
Sbjct: 315 CVQNGMVPESFSLFHKLVQSGDGF-----DSGTLVSLIRGCSQTSDLENGKVLHACIIRK 369
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
G+ + +VD+ S+ G + +A + M K N W A+L G
Sbjct: 370 -GLESNLVLSTAIVDMYSKCGAIKQASDVFRTME-KRNVITWTAMLVG 415
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 8/227 (3%)
Query: 21 TLLQSCN---NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L++ C+ +++N +H+ ++ GL + T ++ Y ++ A +F T++
Sbjct: 345 SLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKR 404
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W ++ G +++ +++ + +M N T L+ C G L++G VH
Sbjct: 405 NVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVH 464
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF-DGMGQRSVVSWNSILAGYVSCGDF 196
G ++ GY N + LI+ YA G + A +F +G + V+ NS++ GY G
Sbjct: 465 GHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQG 524
Query: 197 DGARRVFDEMPIR----NVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
A RV+D M N ++ +M+ C+ G ++ +LF M R
Sbjct: 525 HQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMER 571
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 232 bits (592), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 245/516 (47%), Gaps = 47/516 (9%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L SC ++ L Q+H+ + + + L+ Y D L A K+F+ +
Sbjct: 348 SVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAI 407
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+N +I GY+R ++++ +R+M + + P + LL L Q+H
Sbjct: 408 DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIH 467
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+++ G + F + LI+ Y+ C
Sbjct: 468 GLIIKYGVSLDEFAGSALIDVYS-------------------------------KCSRVG 496
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
AR VF+E+ +++V WT M +G Q+ +++L L+ ++ +R++
Sbjct: 497 DARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAAS 556
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L+ G+ H Q I P V N L+ MYA G I +A++ F + T
Sbjct: 557 NIASLRHGQQFH---NQVIKMGFDDDPFVA--NTLVDMYAKSGSIEEAHKAFISTNWKDT 611
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
W SMI +A+ G ++AL +F+ M+ ++G++P+ +T + VL AC H G +D G
Sbjct: 612 ACWNSMIATYAQHGEAEKALQVFEDMI-----MEGLKPNYVTFVGVLSACSHTGLLDLGF 666
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
F SM++ +GI P IEHY CMV LL RAG L EA IE MP+K +W +LL C++
Sbjct: 667 DHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRV 725
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
N EL + ++ D +G VLLSNI+A W +V +R+KM GV K PG
Sbjct: 726 SGNVELGTYAAEMAISCNPAD--SGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPG 783
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
SWI++N +H F+A D H+ S I +L ++ Q
Sbjct: 784 CSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQ 819
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 174/383 (45%), Gaps = 44/383 (11%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQ-KTNIITKLLSFYI 59
L R P +R I + + LLQS +I +IHS++V+ G + ++ LL Y
Sbjct: 27 FLEPRIPPIIEQRKIGRELANLLQS-PHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYS 85
Query: 60 ASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQ-MVSTEAEPNGFTYS 118
+ + HA+KLF T+ + + W+ ++ Y +++ + Q M S +PN + +
Sbjct: 86 KLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILA 145
Query: 119 FLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR 178
++ AC + G L Q+HG+V+ GY +V+V T+LI+FY ++ AR +FDG+ +
Sbjct: 146 SVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVK 205
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+ +W +I+AGY +++GR + +L LF +M+
Sbjct: 206 TSFTWTTIIAGY-------------------------------SKQGRSQVSLKLFDQMK 234
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
V L+ G+ IH YV + + + V + N I Y
Sbjct: 235 EGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMD-----VSMVNGFIDFYFK 289
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
C + ++F +M ++ VSWT++I + ++AL LF M G PDA
Sbjct: 290 CHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWN-----PDAF 344
Query: 359 TLIVVLCACCHAGFVDEGRRIFA 381
VL +C +++GR++ A
Sbjct: 345 GCTSVLNSCGSLVALEKGRQVHA 367
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 147/346 (42%), Gaps = 39/346 (11%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSF 57
ML +F+ + + + + +++++C L +QIH VV G Q + T L+ F
Sbjct: 126 MLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDF 185
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y + A LF + ++ W II GY++ S++ + QM P+ +
Sbjct: 186 YTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVL 245
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
S +LSAC+ L G+Q+H VL G +V + I+FY
Sbjct: 246 SSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFY------------------ 287
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
C R++FD M +NVVSWTT+IAGC Q + AL LF EM
Sbjct: 288 -------------FKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEM 334
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
R L+ GR +H Y + + + + N LI MYA
Sbjct: 335 ARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDD-----FVKNGLIDMYA 389
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
C + DA +VF M VS+ +MI +++Q EAL LF+ M
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREM 435
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 13/263 (4%)
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
G + + N++L Y + A ++FD M +N+V+W++M++ C +AL L
Sbjct: 68 GFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALML 127
Query: 234 FGE-MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
F + MR + G L IH +V + V + +L
Sbjct: 128 FVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHG-----LVVKGGYVQDVYVCTSL 182
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I Y I DA +F + +++ +WT++I ++KQG + +L LF M +G
Sbjct: 183 IDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM-KEG----H 237
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
V PD L VL AC F++ G++I + R+ GI + +D + +
Sbjct: 238 VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRS-GIVMDVSMVNGFIDFYFKCHKVQLG 296
Query: 413 HGLIENMPLKPNDALWGALLGGC 435
L + M + N W ++ GC
Sbjct: 297 RKLFDRM-VDKNVVSWTTVIAGC 318
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 224/468 (47%), Gaps = 43/468 (9%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+HS ++ GL + L + Y L+ ++++F W +I G+
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHG 516
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P +++ +++M+ E P+ T +L+AC LLR G ++HG G +N V
Sbjct: 517 YPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGG 576
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L+N Y+ CG AR+VFD +P ++ +
Sbjct: 577 ALVNMYS-------------------------------KCGSLSLARKVFDILPHKDAFA 605
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
+++++G AQ G +++ LF +M R +G +H Y++
Sbjct: 606 CSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYIE 665
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + Q V + ++L+ MY+ CG I D + F + + + WTS+I+++A+ G G
Sbjct: 666 KLGL-----QADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHGKG 720
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+AL ++ M S+G V PDA+T + +L AC H+G V+E SM + I+P
Sbjct: 721 ADALAAYELMKSEG-----VEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSH 775
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
HY C+VD+L R+G L EA I NMP++PN +WG LL C++H + EL + K++
Sbjct: 776 RHYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKVHGDFELGKLAAEKVMG 835
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
+D G V SNI A ++W++V +R + + G+KK P S +
Sbjct: 836 LEPSD--VGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAWSVV 881
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 177/392 (45%), Gaps = 43/392 (10%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ L+ Y S + AHKLF TI PS WN +I GY R+ KS+E + +M
Sbjct: 72 FMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFG 131
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
EP+ F+Y +LSACV G QV +V+ G+ S+ +V+T +++ + +A
Sbjct: 132 FEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEAL 191
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQ 229
F+ +V SWN+I++ + ++N G +
Sbjct: 192 RFFNDASCDNVASWNAIIS-----------------LAVKN--------------GENQV 220
Query: 230 ALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN 289
AL+LF EM RA + ++++G+ +H +A V +
Sbjct: 221 ALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHG------LAIKCGATDVFVE 274
Query: 290 NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAG 349
A++ +YA G + +AY+ F++M ++ VSWT++I F +Q AL LFK M G
Sbjct: 275 TAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHE 334
Query: 350 VDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+ +A T+ VL AC ++E ++I S+ G+ ++ +V++ ++ G +
Sbjct: 335 I-----NAYTVTSVLSACAKPELIEEAKQIH-SLVLKLGLILNVKVGAALVNMYAKIGGV 388
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNS 441
+ M + +W ++L ++NS
Sbjct: 389 GLSELAFSEMKNMKDPGIWASMLSSFAQNRNS 420
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 156/371 (42%), Gaps = 44/371 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE 111
T ++ Y + A++ FS + + W II G+ + +++ ++ M E
Sbjct: 275 TAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHE 334
Query: 112 PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHV 171
N +T + +LSAC + L+ E +Q+H +VL G NV V L+N YA GGV +
Sbjct: 335 INAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELA 394
Query: 172 FDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL 231
F M +++ W +M++ AQ +AL
Sbjct: 395 FSEMKN------------------------------MKDPGIWASMLSSFAQNRNSGRAL 424
Query: 232 SLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNA 291
LF M R V+ LG +H Y+ + + N + +
Sbjct: 425 ELFTVMLREGVKPDEYCIGSLLSIMSSL---SLGSQVHSYILKAGLVTN-----ATVGCS 476
Query: 292 LIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
L MY+ CG + ++Y+VF + + VSW SMI F + G +AL LFK M+
Sbjct: 477 LFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEML-----YQ 531
Query: 352 GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDE 411
V PD ITLI +L AC + GR I S R G+ G +V++ S+ G L
Sbjct: 532 EVVPDHITLISILTACADLRLLRTGREIHGSTFR-LGLGTNTVVGGALVNMYSKCGSLSL 590
Query: 412 AHGLIENMPLK 422
A + + +P K
Sbjct: 591 ARKVFDILPHK 601
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 156/344 (45%), Gaps = 54/344 (15%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L +C +Q +Q+ S VV NG + T+++ + + A + F+
Sbjct: 141 SVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCD 200
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN II ++ ++ + +M PN +T+ +L+AC ++ G+ VH
Sbjct: 201 NVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVH 260
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G+ + G ++VFVET +++ YA G + +A F M ++VVSW +I++G+V D
Sbjct: 261 GLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTT 319
Query: 198 GARRVFDEMPI----RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
A ++F +M N + T++++ CA+ ++A + +
Sbjct: 320 FALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLV---------------- 363
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
LKLG ++ V++ AL++MYA G +G + F++M
Sbjct: 364 --------LKLGLILN----------------VKVGAALVNMYAKIGGVGLSELAFSEMK 399
Query: 314 Q-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+ W SM+ +FA+ AL LF M+ +GV+PD
Sbjct: 400 NMKDPGIWASMLSSFAQNRNSGRALELFTVMLR-----EGVKPD 438
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 182/422 (43%), Gaps = 58/422 (13%)
Query: 19 VFTLLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L +C I+ QIHS V+ GL + L++ Y + + FS +
Sbjct: 340 VTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMK 399
Query: 76 N-PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
N +W ++ +A++ +++E + M+ +P+ + S L G
Sbjct: 400 NMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEYCIG---SLLSIMSSLSLGS 456
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
QVH +L G +N V +L Y+ G +E++ VF + VSW S+++G+V G
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHG 516
Query: 195 DFDGARRVFDEMPIRNVV----SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
D A R+F EM + VV + +++ CA ++R
Sbjct: 517 YPDQALRLFKEMLYQEVVPDHITLISILTACA-------------DLRL----------- 552
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
L+ GR IH + + N + AL++MY+ CG + A +VF
Sbjct: 553 -----------LRTGREIHGSTFRLGLGTN-----TVVGGALVNMYSKCGSLSLARKVFD 596
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+P + + +S++ +A+ GL +E+ LF M+ + V DA T+ +L A
Sbjct: 597 ILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETV-----DAFTITSILGAASLL 651
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGA 430
D G ++ A + + G+ + ++ + S+ G +++ +++ KP+ W +
Sbjct: 652 CQSDIGTQLHAYIEK-LGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVE-KPDLIGWTS 709
Query: 431 LL 432
L+
Sbjct: 710 LI 711
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 7/226 (3%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
+ ++L +C +++ L +IH GL T + L++ Y L A K+F +
Sbjct: 540 LISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILP 599
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
+ + ++ GYA++ +S + M+ + + FT + +L A G Q
Sbjct: 600 HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQ 659
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + G ++V V ++L+ Y+ G +E R FD + + ++ W S++ Y G
Sbjct: 660 LHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHGK 719
Query: 196 FDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEM 237
A ++ M V V++ +++ C+ G ++A M
Sbjct: 720 GADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSM 765
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 13/258 (5%)
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
Q + +S++ Y D A ++FD + ++VSW MI+G + ++L +F
Sbjct: 67 QSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCR 126
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M E G + +V +N S + ++ M+
Sbjct: 127 MHLFGFEPDEFSYGSVLSACVALQASMFGLQVF-----SLVVKNGFLSSGYVQTQMVDMF 181
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
+A + F + SW ++I K G + AL LF M + P+
Sbjct: 182 CKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCR-----ASLMPN 236
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+ T +L ACC + G+ + + +E +VDL ++ G + EA+
Sbjct: 237 SYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVE--TAIVDLYAKFGCMSEAYRQF 294
Query: 417 ENMPLKPNDALWGALLGG 434
M ++ N W A++ G
Sbjct: 295 SQMQVQ-NVVSWTAIISG 311
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 230 bits (587), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 230/472 (48%), Gaps = 45/472 (9%)
Query: 34 QIHSQVVLNG---LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
QIH VV++G + + T + FY A +F ++ + W +I G A
Sbjct: 190 QIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCA 249
Query: 91 RSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
+ ++ CYR+M PN T LL+AC R G ++ G+++HG +G+ S
Sbjct: 250 NNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHS 309
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
LI Y G Q+ H+ A R+F+ +R+
Sbjct: 310 FSPALIYLYCECG---QSLHL---------------------------AERIFEGSSLRD 339
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
VV W+++I A++G +AL LF +MR E K G IH
Sbjct: 340 VVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHG 399
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQ 330
Y+ + + S+ + NALI+MYA CG + D+ ++F +MP R +V+W SMI A+
Sbjct: 400 YILKFGIGF-----SIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLH 454
Query: 331 GLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G G++AL F M G V+ DA+T + VL AC HAG V EG+++F +N I
Sbjct: 455 GYGEQALQHFYEMKERG-----VKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIP 509
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
IEHY C++DL R+G L++A ++ MP+KP+ +W +L+ C++H ++A + +
Sbjct: 510 ITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQ 569
Query: 451 LVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
L+ + + AA Y LLS I+A RW D+ VR+ M ++K G S I+
Sbjct: 570 LIRS-EPNNAASY-TLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 183/421 (43%), Gaps = 57/421 (13%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H + G + ++S Y ++ A ++F T+ + T WN +I Y ++
Sbjct: 87 QLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNG 146
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLL--REGEQVHGIVLVKGYCS---N 148
++++ + P + ++S C R L R G Q+HG+V+V G +
Sbjct: 147 LLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHS 206
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
VF+ T ++FY G AR VFD M ++ VSW ++++G + D+D A + EM +
Sbjct: 207 VFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQV 266
Query: 209 R----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL 264
N V+ ++A CA+ G +K
Sbjct: 267 EGVSPNRVTLIALLAACARPGF-----------------------------------VKY 291
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG-VIGDAYQVFTKMPQRSTVSWTSM 323
G+ IH Y +R + ALI++Y CG + A ++F R V W+S+
Sbjct: 292 GKEIHGYAFRRGFDSCHS-----FSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSI 346
Query: 324 IMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASM 383
I ++A++G +AL LF M + + P+ +TL+ V+ AC + G I +
Sbjct: 347 IGSYARRGESDKALKLFNKMRT-----EETEPNYVTLLAVISACTNLSSFKHGGVIHGYI 401
Query: 384 NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSEL 443
+ +GI I ++++ ++ G LD++ + MP + + W +++ +H E
Sbjct: 402 LK-FGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSR-DSVTWNSMISAYGLHGYGEQ 459
Query: 444 A 444
A
Sbjct: 460 A 460
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 127/292 (43%), Gaps = 15/292 (5%)
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
NSI++ Y D + AR+VFD MP R+ ++W +MI Q G +AL + +
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164
Query: 244 XXXXXXXXXXXXXXXXGDL--KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
DL ++GR IH V + R + Q SV L+ A + Y CG
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVV--VDGRIRIQHSVFLSTAFVDFYFRCGD 222
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
A VF +M ++ VSWT++I A AL ++ M V+GV P+ +TLI
Sbjct: 223 SLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREM-----QVEGVSPNRVTLI 277
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG-FLDEAHGLIENMP 420
+L AC GFV G+ I R G ++ L G L A + E
Sbjct: 278 ALLAACARPGFVKYGKEIHGYAFRR-GFDSCHSFSPALIYLYCECGQSLHLAERIFEGSS 336
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
L+ + LW +++G S+ A + K+ E + Y+ LL+ I A
Sbjct: 337 LR-DVVLWSSIIGSYARRGESDKALKLFNKMRTE---ETEPNYVTLLAVISA 384
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 238/514 (46%), Gaps = 46/514 (8%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTT 80
+LL++C + Q H+Q +L L + T LL Y + HA KLF + +
Sbjct: 8 SLLRTCKTHSTVSQCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMH 67
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
WN +I Y + + ++ + P+ +T L +R G HG+V
Sbjct: 68 SWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLV 127
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ GY + VV NS+L YV CG A
Sbjct: 128 VKLGY-------------------------------EEIVVVNNSVLEFYVKCGTMSQAL 156
Query: 201 RVF-DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR--VEXXXXXXXXXXXXXX 257
VF + R+ +W MI+G + G +A+ F EM + R +E
Sbjct: 157 SVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACG 216
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
GDL + +H ++ R + P + NALI Y CG + D+ +F + +
Sbjct: 217 KEGDLLKVKEVHGFIV-RNFGFDADAP---IGNALIDNYGKCGSLKDSENIFKTVCYVNL 272
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V+WT+MI + G G+E++ LF+ M+ +G RP+A+TL +L +C H G +D+G+
Sbjct: 273 VTWTTMISCYGMHGKGQESVVLFEKMMDEG-----FRPNAVTLTAILASCSHCGLLDQGK 327
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP-NDALWGALLGGCQ 436
+IF SM +G+ P EHY CMVDL SR G L+EA L+E M ++WGALL GC
Sbjct: 328 KIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAGCV 387
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H+N ++ V L +L+ + + Y V L IY V +R KM ++G+ K P
Sbjct: 388 MHQNVKIGEVAAHHLF-QLEPNNTSNY-VALWGIYQSRGMVLGVSTIRGKMRDLGLVKTP 445
Query: 497 GQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
G SWI I G H F GD++H S+ I + + EI
Sbjct: 446 GCSWINIAGRAHKFYQGDLSHPLSHIICKRVYEI 479
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 228/452 (50%), Gaps = 16/452 (3%)
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
T WN +I GYA++ K++ + +M + T + +LS C L+ G+ VH
Sbjct: 226 TVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHA 285
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
VL Y SN F+ + +++ Y G + A V+ G+G +S + +S++ GY S G+
Sbjct: 286 WVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMK 345
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE-MRRARVEXXXXXXXXXXXXXX 257
A+R+FD + RN V WT + +G A+ +C++ LF + + R +
Sbjct: 346 AQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACA 405
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP--QR 315
L LG+ IH Y + R + + +L +A++ MY+ CG I A + F M R
Sbjct: 406 TQATLSLGKQIHTY-----ILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDR 460
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ + MI +A G +A+ LF M+ V+PDA+T + +L AC H G V++
Sbjct: 461 DVILYNVMIAGYAHHGFENKAIQLFHDMLK-----KNVKPDAVTFVALLSACRHRGLVEQ 515
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
G F SM + + P I HY CMVD+ RA L++A + +P++ + +WGA L C
Sbjct: 516 GEIFFISM-EDYSVLPEINHYACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNAC 574
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
QI+ N+ L + E +L+ ++ D V L+N+YA W ++ +R+KM KK
Sbjct: 575 QINNNTSLVNKAEEELL-KIGAD-TGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKL 632
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEIL 527
G SWI + +H F +GD +H + IY L
Sbjct: 633 TGCSWIYVENGIHAFTSGDTSHAKADAIYSTL 664
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/466 (23%), Positives = 191/466 (40%), Gaps = 68/466 (14%)
Query: 36 HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
H Q + +G + +L+ Y L+ AHKLF I +P+ WN +I Y ++
Sbjct: 15 HVQAIKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNL 74
Query: 96 WKS-----------VECYRQMVSTEAEPNG-----------------------FTYSFLL 121
++ + Y M+S +G F+ + ++
Sbjct: 75 TQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMV 134
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM-GQRSV 180
+ + L+ G+Q+H ++ + F ++LIN Y+ G A V G G +
Sbjct: 135 NFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDL 194
Query: 181 VSWNSILAGYVSCGDFDGARRVF-DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
VS N+++A G+ D A VF + + VSW T+IAG AQ G +AL+LF +M
Sbjct: 195 VSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTE 254
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLN---------- 289
V LKLG+ +H +V + NQ S ++
Sbjct: 255 RGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRY 314
Query: 290 ----------------NALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
++LI Y+S G + A ++F + +R++V WT++ +AK
Sbjct: 315 AELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQC 374
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
+E LF+ V+ + + PDA+ +I VL AC + G++I + R +
Sbjct: 375 EEVFKLFRKFVTR----EELIPDAMIIIRVLGACATQATLSLGKQIHTYILRM-RLKMDK 429
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA-LWGALLGGCQIH 438
+ MVD+ S+ G + A + M + D L+ ++ G H
Sbjct: 430 KLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHH 475
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 13/232 (5%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNI-ITKLLSFYIASDQLQHAHKLFST 73
I + L C NI+ ++++V G+ K+ ++ L+ Y + ++ A +LF +
Sbjct: 298 ISSGIVDLYCKCGNIR-----YAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDS 352
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLRE 132
+ ++ VW + GYA+S + + +R+ V+ E P+ +L AC L
Sbjct: 353 LLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSL 412
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG--QRSVVSWNSILAGY 190
G+Q+H +L + + + +++ Y+ G + A F M R V+ +N ++AGY
Sbjct: 413 GKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGY 472
Query: 191 VSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
G + A ++F +M +NV V++ +++ C +G +Q F M
Sbjct: 473 AHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISME 524
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 201/356 (56%), Gaps = 12/356 (3%)
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y G AR VF+ +P R+VVS T +I+G AQ G ++AL LF ++ ++
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
L LG+ +H +V R++ V L N+LI MY+ CG + + ++F
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHV-----LRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIF 116
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
M +R+ +SW +M++ ++K G G+E L LF M + V+PD++T++ VL C H
Sbjct: 117 DTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETK----VKPDSVTILAVLSGCSH 172
Query: 370 AGFVDEGRRIFASMNR-TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
G D+G IF M+ + P++EHYGC+VDLL R+G ++EA I+ MP +P A+W
Sbjct: 173 GGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIW 232
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
G+LLG C++H N ++ +L+ E++ G AG V+LSN+YA A RW+DV ++R M+
Sbjct: 233 GSLLGACRVHSNVDIGEFAGQQLL-EIEP-GNAGNYVILSNLYASAGRWEDVSSLRDLML 290
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDIT 544
+ V K PG+S I+++ V+H F A D +H I + E+ Y PD++
Sbjct: 291 KKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLS 346
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y ++ A +F + II GYA+ +++E +R++ + N T
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
Y+ +L+A L G+QVH VL S V ++ +LI+ Y+ G + +R +FD M
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVF----DEMPIR-NVVSWTTMIAGCAQKGRCKQAL 231
+R+V+SWN++L GY G+ ++F +E ++ + V+ +++GC+ G + L
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 180
Query: 232 SLFGEMRRARVE 243
++F +M ++E
Sbjct: 181 NIFNDMSSGKIE 192
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
MYA G I +A VF +P+R VS T++I +A+ GL +EAL LF+ + +G++
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQG-----EGMK 55
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
+ +T VL A +D G+++ + R+ I + ++D+ S+ G L +
Sbjct: 56 SNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE-IPSFVVLQNSLIDMYSKCGNLTYSRR 114
Query: 415 LIENMPLKPNDALWGALLGGCQIH 438
+ + M + + W A+L G H
Sbjct: 115 IFDTMYERTVIS-WNAMLVGYSKH 137
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 236/483 (48%), Gaps = 43/483 (8%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
IH+Q + G ++ ++ L + Y + + +LF + P W ++I Y +
Sbjct: 274 IHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGD 333
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
++++ +++M ++ PN +T++ ++SAC + + GEQ+HG
Sbjct: 334 EERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHG---------------- 377
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
+A R G+ A V NSI+ Y CG A VFD M ++++SW
Sbjct: 378 ----HALRLGLVDALSVS-----------NSIITLYSKCGLLQEASLVFDGMTRKDIISW 422
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
+T+I+ Q K+A + M R + L+ G+ +H Y
Sbjct: 423 STIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYA-- 480
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
+ + + +++ALI MY+ G + +A ++F + VSWT+MI +A+ G +
Sbjct: 481 LCIGLDHE---TMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQ 537
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA+ LF+ + S G + PD +T I +L AC HAG VD G + M + I+P E
Sbjct: 538 EAISLFENISSVG-----LMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKE 592
Query: 395 HYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
HYGC++DLL RAG L EA ++ NMP +D +W LL C+ H + + A +++
Sbjct: 593 HYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQML-R 651
Query: 455 LDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGD 514
L + +AG + L+NIY+ + R ++ VR+ M GV K PG SWI N ++ FVAG
Sbjct: 652 LHPN-SAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGV 710
Query: 515 MTH 517
+H
Sbjct: 711 QSH 713
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 144/361 (39%), Gaps = 43/361 (11%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLL 121
++ A +F+ + + W ++I GY + +++ + M V + + + F S L
Sbjct: 99 KICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVAL 158
Query: 122 SACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV 181
AC G + GE +HG + G ++VFV + L++ Y G EQ
Sbjct: 159 KACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQG------------- 205
Query: 182 SWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
C VF+ M RNVVSWT +I G G LS F EM R++
Sbjct: 206 -----------CS-------VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSK 247
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V G L G+ IH Q I + + + N L MY+ C
Sbjct: 248 VGYDSHTFAVALKASAESGLLHYGKAIH---AQTI--KQGFNETAYVVNTLGTMYSKCRK 302
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
++F KM VSWT++IM + + G + AL FK M V P+ T
Sbjct: 303 PDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRK-----SDVSPNEYTFA 357
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
V+ AC + G +I R G+ + ++ L S+ G L EA + + M
Sbjct: 358 SVISACANLAITKWGEQIHGHALRL-GLVDALSVSNSIITLYSKCGLLQEASLVFDGMTR 416
Query: 422 K 422
K
Sbjct: 417 K 417
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 168/415 (40%), Gaps = 53/415 (12%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H V +GL + + L+ Y+ + + +F + + W +I G +
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+ + +M ++ + T++ L A GLL G+ +H + +G+ +V
Sbjct: 233 SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNT 292
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSW 214
L Y+ C D R+F +M +VVSW
Sbjct: 293 LGTMYS-------------------------------KCRKPDYVMRLFGKMSTPDVVSW 321
Query: 215 TTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQ 274
T +I Q G ++AL F MR++ V K G IH +
Sbjct: 322 TNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHA-- 379
Query: 275 RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGK 334
R ++ ++N++I +Y+ CG++ +A VF M ++ +SW+++I + + K
Sbjct: 380 ---LRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAK 436
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIE 394
EA M +G +P+ L VL C ++ G+++ A + + ++
Sbjct: 437 EAFNYLSWMSREGP-----KPNEFALASVLSVCGSMALLEPGKQVHA-----YALCIGLD 486
Query: 395 H----YGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIHKNSELA 444
H + ++ + SR+G L EA + ++ +K ND + W A++ G H S+ A
Sbjct: 487 HETMVHSALISMYSRSGNLQEASKIFDS--IKNNDIVSWTAMINGYAEHGYSQEA 539
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH + GL ++ +++ Y LQ A +F + W+ II Y +
Sbjct: 374 QIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGS 433
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ M +PN F + +LS C LL G+QVH L G V +
Sbjct: 434 HAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHS 493
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP----IR 209
LI+ Y+ G +++A +FD + +VSW +++ GY G A +F+ + +
Sbjct: 494 ALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMP 553
Query: 210 NVVSWTTMIAGCAQKG 225
+ V++ ++ C G
Sbjct: 554 DYVTFIGILTACNHAG 569
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ + GL +T + + L+S Y S LQ A K+F +I N W +I GYA
Sbjct: 475 QVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHG 534
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+++ + + S P+ T+ +L+AC GL+ G + ++ + +
Sbjct: 535 YSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY 594
Query: 154 N-LINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
+I+ G + +A H+ M V W+++L GD D A ++M
Sbjct: 595 GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQM 649
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 157/515 (30%), Positives = 240/515 (46%), Gaps = 57/515 (11%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS---TID 75
+ TLL ++Q+H ++V +GL + +++ Y LQ A ++F T+
Sbjct: 207 LLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVT 266
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
WN ++ Y + + + +M S EP+ ++Y+ ++S C GE
Sbjct: 267 CRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGES 326
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+HG+V+ +G +V V LI Y G FD C
Sbjct: 327 LHGLVIKRGAEVSVPVSNALIAMYLG----------FDN-----------------RC-- 357
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ A R+F M +++ +W +++AG Q GR + AL LF ++R VE
Sbjct: 358 MEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRC 417
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR 315
L+LG+ +H + N+ V DA + F
Sbjct: 418 CSDLATLQLGQQVHVLSLKVGFDTNKY------------------VGKDAKKCFETTSND 459
Query: 316 STVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
+ + W S+I +A+ G G AL LF M V+PD IT + VL AC H G V+E
Sbjct: 460 NAIIWNSIIFGYAQHGQGNIALELFYLMREKK-----VKPDHITFVAVLTACSHNGLVEE 514
Query: 376 GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC 435
GR+I SM +GI R+EHY C VDL RAG+L+E L+E MP +P+ + LLG C
Sbjct: 515 GRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGAC 574
Query: 436 QIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKP 495
+ N ELAS V K++ L+ + + Y VLLS++Y K W + +V + M E GVKK
Sbjct: 575 RSCGNIELASHV-AKMLLVLEPEDHSTY-VLLSDLYGRLKMWDEKASVTRLMRERGVKKV 632
Query: 496 PGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
PG SWI++ VH F A D +H S IYE+L ++
Sbjct: 633 PGWSWIEVKNKVHAFNAEDHSHPQSKEIYELLLQL 667
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+ H + + G S+++ NLI Y+ + A +FD M QR VSWN++++GYV+
Sbjct: 19 QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
D D ++ + M + ++ G KG + RA+
Sbjct: 79 ADLDSTWQLLNAMRVSG-HAFDNHTFGSTLKG-----------VARAQ------------ 114
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
L+LG+ +H ++ + + +V +AL+ MYA CG + DA VF MP
Sbjct: 115 -------RLELGQQLH-----SVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMP 162
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV-DGVRPDAITLI 361
+ + VSW ++I +++ G A L + +G G+ DG +TL+
Sbjct: 163 ECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLL 211
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 130/333 (39%), Gaps = 54/333 (16%)
Query: 41 LNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS---HTPWK 97
++ L N+IT Y QL A +LF + T WN +I GY + + W+
Sbjct: 31 ISDLYTSNNLITA----YSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQ 86
Query: 98 SVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLIN 157
+ R VS A N T+ L R L G+Q+H +++ NVF + L++
Sbjct: 87 LLNAMR--VSGHAFDN-HTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLD 143
Query: 158 FYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTM 217
YA G V+ A VF M + + VSWN+++AGY GD D A + + V
Sbjct: 144 MYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGV------ 197
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIV 277
G L+L +R L +H +IV
Sbjct: 198 ---GIDDGTVSPLLTLLDGVRF----------------------YSLVMQLHC----KIV 228
Query: 278 ARNQQQPSVRLNNALIHMYASCGVIGDAYQVF---TKMPQRSTVSWTSMIMAFAKQGLGK 334
+ ++ N A+I Y+ C + DA +VF + R V+W SM+ A+
Sbjct: 229 KHGLEAFNIVCN-AIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKEN 287
Query: 335 EALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
A +F M S G PD + V+ C
Sbjct: 288 LAFDVFIEMQS-----FGFEPDDYSYTGVISGC 315
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 217/447 (48%), Gaps = 43/447 (9%)
Query: 53 KLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEP 112
+L+ + S ++ ++F + +PS WN I+ GY +S ++VE +R+M P
Sbjct: 357 NMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNP 416
Query: 113 NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVF 172
+ T + +LS+C GLL G+QVH + G+ +V+V ++LIN Y+
Sbjct: 417 DRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYS------------ 464
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
CG + ++ VF ++ +VV W +MIAG + + AL+
Sbjct: 465 -------------------KCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALA 505
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
F MR+ L G+ IH + + N V + ++L
Sbjct: 506 CFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDN-----VFVGSSL 560
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ MY CG +G A F MP ++ V+W MI +A G G EA+ L+K M+S G
Sbjct: 561 VEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGE---- 616
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
+PD IT + VL AC H+ VDEG IF+SM + + + P+++HY C++D L R G +E
Sbjct: 617 -KPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEV 675
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
+++ MP K + +W +L C++H N LA +L L+ +A Y VLL+N+Y+
Sbjct: 676 EVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEEL-HRLNPRNSAPY-VLLANMYS 733
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQS 499
RW D VR M + + K PG S
Sbjct: 734 SMGRWDDAQVVRDLMSDNQIHKDPGYS 760
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 156/335 (46%), Gaps = 19/335 (5%)
Query: 120 LLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
LL +C+ L + +H + S+ F+ +LI+ Y+ + A HVFD + ++
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR- 238
+ S+N+IL+ + + A R+F +MP RN VS T+I + G +QAL + M
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
V+ D+ GR H +V + ++ ++NAL+ MY
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHG-----LVLKVGFDSNIYVSNALLCMYTK 185
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG+ DA++VF + + + V++T+M+ ++ KE L LF+ M+ G VD V ++
Sbjct: 186 CGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSV---SL 242
Query: 359 TLIVVLCAC-CHAGFVDEGR--------RIFASMNRTWGISPRIEHYGCMVDLLSRAGFL 409
+ I+V+CA G D+ R + ++ G + ++D+ ++ G +
Sbjct: 243 STILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDM 302
Query: 410 DEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
D A + EN+ K + W ++ G +SE A
Sbjct: 303 DSAENVFENLD-KHSVVSWNIMISGYGNRCDSEKA 336
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 165/405 (40%), Gaps = 86/405 (21%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH+ V +G + ++ LL Y + + A +F +D S WN +I GY
Sbjct: 272 QIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRC 331
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
K++EC+++M EP+ TY +L+ACV+ G ++ G
Sbjct: 332 DSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVG-------------------- 371
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
R +FD M S++SWN+IL+GY D A +F +M +
Sbjct: 372 ---------------RQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNP 416
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+ + +++ CA+ G L+ G+ +H
Sbjct: 417 DRTTLAIILSSCAELGL-----------------------------------LEAGKQVH 441
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAK 329
V Q++ + V + ++LI++Y+ CG + + VF+K+ + V W SMI F+
Sbjct: 442 A-VSQKLGFYDD----VYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSI 496
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGI 389
L ++AL FK M G P + + +C + +G++I A + + G
Sbjct: 497 NSLEQDALACFKRMRQ-----FGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD-GY 550
Query: 390 SPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ +V++ + G + A + MP K N W ++ G
Sbjct: 551 VDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK-NIVTWNEMIHG 594
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 189/465 (40%), Gaps = 90/465 (19%)
Query: 18 HVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
++ LLQSC ++L IH+++ L T + L+ Y +Q+ AH +F I
Sbjct: 7 NLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKI 66
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQ------------------------------ 104
+ + +N I+ + +S+ + + Q
Sbjct: 67 PHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYD 126
Query: 105 --MVSTEAEPNGFTYSFLLSACVRGGL--LREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
MV +P+ T++ + SAC GGL + G + HG+VL G+ SN++V L+ Y
Sbjct: 127 LMMVYESVKPSHITFATVFSAC--GGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYT 184
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTT 216
G E A VF+G+ + + V++ +++ G +F M + + VS +T
Sbjct: 185 KCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLST 244
Query: 217 MIAGCAQK---GRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
++ CA+ G C + L + G+ IH
Sbjct: 245 ILVICAKGVSFGVCDDSRGLSTNAQ--------------------------GKQIH---- 274
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ ++ + + L N+L+ MYA G + A VF + + S VSW MI + +
Sbjct: 275 -TLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDS 333
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
++AL F+ M G PD +T I +L AC +G V GR+IF M+ SP +
Sbjct: 334 EKALECFQRM-----QCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMS-----SPSL 383
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLK---PNDALWGALLGGC 435
+ ++ +++ EA L M + P+ +L C
Sbjct: 384 ISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSC 428
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H+ G + + L++ Y +++ + +FS + WN +I G++ +
Sbjct: 439 QVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINS 498
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
++ C+++M P+ F+++ + S+C + L +G+Q+H ++ GY NVFV +
Sbjct: 499 LEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGS 558
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM----PIR 209
+L+ Y G V AR+ FD M +++V+WN ++ GY G A ++ +M
Sbjct: 559 SLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKP 618
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
+ +++ ++ C+ + + +F M
Sbjct: 619 DDITFVAVLTACSHSALVDEGVEIFSSM 646
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 154/403 (38%), Gaps = 66/403 (16%)
Query: 36 HSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTP 95
H V+ G + LL Y + A ++F I P+ + ++ G ++++
Sbjct: 161 HGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQV 220
Query: 96 WKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNL 155
+ +E +R M+ + + S +L C +G + G+ + +
Sbjct: 221 KEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGL--------STNAQGKQ 272
Query: 156 INFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWT 215
I+ A + G E+ H+ NS+L Y GD D A VF+ + +VVSW
Sbjct: 273 IHTLAVKHGFERDLHL-----------CNSLLDMYAKTGDMDSAENVFENLDKHSVVSWN 321
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
MI+G + ++AL F M+ E GD+K+GR
Sbjct: 322 IMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGR--------- 372
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
Q+F M S +SW +++ + + E
Sbjct: 373 -------------------------------QIFDCMSSPSLISWNAILSGYNQSADHGE 401
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH 395
A+ LF+ M PD TL ++L +C G ++ G+++ A +++ G +
Sbjct: 402 AVELFRKM-----QFQWQNPDRTTLAIILSSCAELGLLEAGKQVHA-VSQKLGFYDDVYV 455
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
++++ S+ G ++ + + + + + W +++ G I+
Sbjct: 456 ASSLINVYSKCGKMEVSKHVFSKLS-ELDVVCWNSMIAGFSIN 497
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+ SC + +L Q IH+Q++ +G + + L+ Y + A F +
Sbjct: 524 TIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGK 583
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ WN +I GYA + ++V Y+ M+S+ +P+ T+ +L+AC L+ EG ++
Sbjct: 584 NIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIF 643
Query: 138 GIVLVK 143
+L K
Sbjct: 644 SSMLQK 649
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 229 bits (583), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 234/490 (47%), Gaps = 50/490 (10%)
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y + ++ A +LF + + W II G R+ ++++ ++ MV G +
Sbjct: 168 YCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGV--GISS 225
Query: 118 SFL---LSACVRGGLLREGEQVHGIVLVKGYCSNV--FVETNLINFYAGRGGVEQARHVF 172
+ L LSA + G Q+H + G+C + FV +L+ FYA
Sbjct: 226 TTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYA------------ 273
Query: 173 DGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALS 232
SC A +VF E +NVV WT ++ GC + +AL
Sbjct: 274 -------------------SCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALE 314
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
+F EM R V DL+ GR IH + + +V N+L
Sbjct: 315 VFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIH-----AAGIKMGLENAVYTGNSL 369
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
+ MY+ CG IGDA VF + +++ VSW S+I+ A+ G G AL LFK M+ +G
Sbjct: 370 VVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREG----- 424
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
V D ITL +L AC +G + + R F R + +EHY CMVD+L R G ++EA
Sbjct: 425 VESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEA 484
Query: 413 HGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYA 472
L +MP++ N +W LL C++H + ++A K + E++ D +A Y VLLSN+YA
Sbjct: 485 EALATSMPVEANSMVWLVLLSACRVHSSLDVAERA-AKRIFEMEPDCSAAY-VLLSNLYA 542
Query: 473 FAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIK 532
++RW +V +R KM G+ K PG SWI + G+ H+F++ D +H + IYE L +
Sbjct: 543 SSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGV 602
Query: 533 QSHVDSYEPD 542
+ Y PD
Sbjct: 603 KLRELGYIPD 612
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 52/295 (17%)
Query: 148 NVFVETNLINFYAGRGGVEQARHVFDGM--GQRSVVSWNSILAGYVSCGDFDGARRVFDE 205
+V + T L+ YA + +A ++F+ + + +SWNS++ + C DF A ++FDE
Sbjct: 60 HVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDE 119
Query: 206 MPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLG 265
MP RN +SWTT+I G GR +A F M D +
Sbjct: 120 MPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYV--------------------DKDVA 159
Query: 266 RWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIM 325
W NA+++ Y + G + DA ++F +MP R +SWTS+I+
Sbjct: 160 TW----------------------NAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIV 197
Query: 326 AFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNR 385
+ G +AL FK MV G GV + TL+ L A G +I M +
Sbjct: 198 GLDRNGKSYQALFFFKNMV----GFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFK 253
Query: 386 TWGISPRIEHY--GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+G ++ + +V + + +A + K N +W ALL GC ++
Sbjct: 254 -FGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCK-NVVVWTALLTGCGLN 306
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 192/453 (42%), Gaps = 61/453 (13%)
Query: 8 PASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGL-SQKTNIITKLLSFYIASDQLQH 66
P S S+ FT L N+++N ++ V N + S ++ TKLL Y ++ L
Sbjct: 26 PKSSSTSLN---FTFL---NHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHE 79
Query: 67 AHKLFSTI--DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
A LF+ I + T WN +I+ + +V+ + +M + N +++ +
Sbjct: 80 AINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEM----PQRNSISWTTI---- 131
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG--QRSVVS 182
+HG + G V +A F+ M + V +
Sbjct: 132 -----------IHG--------------------FLSTGRVNEAERFFNAMPYVDKDVAT 160
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR-RAR 241
WN+++ GY + G + A R+F +MP R+V+SWT++I G + G+ QAL F M +
Sbjct: 161 WNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSG 220
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
V D G IH + + + ++ +L+ YASC
Sbjct: 221 VGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDE---FVSASLVTFYASCKR 277
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+GDA +VF + ++ V WT+++ EAL +F M+ V P+ +
Sbjct: 278 MGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMR-----FNVVPNESSFT 332
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
L +C +++GR I A+ + G+ + +V + S+ GF+ +A + + +
Sbjct: 333 SALNSCVGLEDLEKGRVIHAAGIKM-GLENAVYTGNSLVVMYSKCGFIGDALCVFKGICE 391
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAE 454
K N W +++ GC H A V+ +++ E
Sbjct: 392 K-NVVSWNSVIVGCAQHGCGTWALVLFKEMLRE 423
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 237/498 (47%), Gaps = 49/498 (9%)
Query: 19 VFTLLQSCNNIQN-LIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+ L Q C Q + QIHS V+ NG L+F +++ H I
Sbjct: 8 LLQLAQRCMKHQKQMKQIHSLVITNGY----------LNFQKSNNASFSNH-----IKWM 52
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLL---SACVRGGLLREGE 134
T + N +IR Y H K + M++ PN T+ LL SA V L
Sbjct: 53 PTLLCNALIRAY-NVHNHNKVFVIFTNMLANNVSPNTHTFPPLLKSSSAFVVTPL----- 106
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
H L +G S+ FV T L+ YA + A+ VF+ + +V+ N+++ + G
Sbjct: 107 --HCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNG 164
Query: 195 DFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR---------VEXX 245
+ +GA VF+ MP R+VVSWTTM+ G A G A+ FG M R + E
Sbjct: 165 NMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEAT 224
Query: 246 XXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
G L GR +H Y+ + V V + +LI++Y G + +
Sbjct: 225 YVSVLSSCTELEGKGALDFGRQVHGYIVVKGV-----DLGVFVGTSLINLYGKMGCLNYS 279
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLC 365
VF M R +W +MI + A G KEAL LF+ M + G++P++IT + VL
Sbjct: 280 ASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKM-----KLQGLKPNSITFVAVLT 334
Query: 366 ACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND 425
AC GFV EG +F SM+ + + P +EHYGC+VDLL RAG + EA +I NMP P+
Sbjct: 335 ACARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDK 394
Query: 426 ALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQ 485
+ GA LG C+IH EL + L +L T YL LLS++YA +RW +R
Sbjct: 395 TVLGAFLGACRIHGAIELGEEIAKML--KLQTQHCGQYL-LLSSMYAEKERWNHAADLRN 451
Query: 486 KMIEMGVKKPPGQSWIQI 503
+++E G+ K P S + +
Sbjct: 452 EIMEAGIHKIPAFSMVHL 469
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 44/268 (16%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
S H F L ++ + +H Q + G+ ++T LL Y ++ + A K+F
Sbjct: 85 SPNTHTFPPLLKSSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEE 144
Query: 74 IDNPSTTVWNHIIRGYARSHT-----------PWKSVECYRQMVSTEA------------ 110
+ N +I + + P++ V + MV+ A
Sbjct: 145 VPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFF 204
Query: 111 --------------EPNGFTYSFLLSACVR---GGLLREGEQVHGIVLVKGYCSNVFVET 153
+PN TY +LS+C G L G QVHG ++VKG VFV T
Sbjct: 205 GTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGT 264
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR---- 209
+LIN Y G + + VF M R V +WN++++ S G A +F++M ++
Sbjct: 265 SLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKP 324
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
N +++ ++ CA+ G + L LF M
Sbjct: 325 NSITFVAVLTACARGGFVSEGLELFESM 352
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 232/504 (46%), Gaps = 44/504 (8%)
Query: 34 QIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
QIHS + +G + T L+ FY+ HAH LF I P+ WN +I GY +
Sbjct: 26 QIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHA 85
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
K++ + ++ ++ + F+++ + AC + LL+ G +H + G +N V
Sbjct: 86 GQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVA 145
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA------------------------ 188
LI+ Y G VE+A +F + + V+SWNS++A
Sbjct: 146 NCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVV 205
Query: 189 -------GYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
G G + A R+ MP N SW ++I G + R +AL +FG+M
Sbjct: 206 SYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKN 265
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
++ L G IH + S+ + ++LI MY+ CG
Sbjct: 266 LQIDEFTFSIILNGIASLSALTWGMLIHC-----CTIKYGLDSSIVVGSSLIDMYSKCGQ 320
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
+ DA +F + R+ VSW +MI +A+ G +A+ LF+ + + +PD IT +
Sbjct: 321 VNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKME----RDTKPDGITFL 376
Query: 362 VVLCACCHAGFVDE-GRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
V+ AC H+ E G + F +M +GI+P I+H M+ L+ + G L A +I +
Sbjct: 377 NVISACSHSQIPFEMGIQYFDAMINEYGIAPSIKHCCSMIRLMGQKGELSRAQKMIHELG 436
Query: 421 LKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDV 480
+ +W +LL C ++ +A + K++ L+ D Y V+LSN+YA RW+DV
Sbjct: 437 FESCGVVWRSLLAACGTQEDLHVAEIAAAKVIG-LERDEDYVY-VMLSNMYASFGRWEDV 494
Query: 481 IAVRQKMIEMGVKKPPGQSWIQIN 504
+R M + V+K G SWI++N
Sbjct: 495 NVIRSLMSKKRVRKEAGSSWIEVN 518
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 218/425 (51%), Gaps = 17/425 (4%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+ +L C + + H +++ GY + + +LI+ YA A HVF +
Sbjct: 7 FHHILKRCKASKNSKTVAKTHARIIILGYATYPSLVASLISTYAHCQQPNIAHHVFSRV- 65
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
++ + N ++ V G+ D A++VFD+MP+R+VV+W T+I G + R ALS+F
Sbjct: 66 -MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRV 124
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M +A+VE G +W+H + ++ V N L AL+ MY
Sbjct: 125 MLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYI-----LTAALVDMY 179
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
A CG + + +VF + + W +MI A G +A +F M V+ V PD
Sbjct: 180 AKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRM-----EVENVLPD 234
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
++T + +L C H G V+ GR+ F M + I P+++HYG MVDLL RAG L+EA+ +I
Sbjct: 235 SVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMI 294
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
+ M ++P+ +W +LL C+IH EL ++ L++ G VLLSN+Y K
Sbjct: 295 KAMSVEPDVVIWRSLLSACRIHGKKELGEFAIAN-ISRLES----GDFVLLSNMYCSFKN 349
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
W VR M + GV+K G+SWI++ G +H F A D +H IY +L +++++ +
Sbjct: 350 WHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSHAEMKAIYRVLEGLMQRAKL 409
Query: 537 DSYEP 541
+ + P
Sbjct: 410 EGFTP 414
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 33/257 (12%)
Query: 15 IQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
I H+ ++ N + + + H+++++ G + +++ L+S Y Q AH +FS +
Sbjct: 6 IFHHILKRCKASKNSKTVAKTHARIIILGYATYPSLVASLISTYAHCQQPNIAHHVFSRV 65
Query: 75 DN-----------------------------PSTTVWNHIIRGYARSHTPWKSVECYRQM 105
N WN +I GY ++ ++ +R M
Sbjct: 66 MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVM 125
Query: 106 VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGV 165
+ + EP+GFT++ +++ C R G + VHG+++ K N + L++ YA G V
Sbjct: 126 LKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRV 185
Query: 166 EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGC 221
+ ++ VF+ + + V WN+++ G G A VF M + NV V++ ++ GC
Sbjct: 186 DVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKGC 245
Query: 222 AQKGRCKQALSLFGEMR 238
+ G + F M+
Sbjct: 246 SHCGLVEVGRKYFEMMQ 262
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 226 bits (577), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 254/564 (45%), Gaps = 67/564 (11%)
Query: 5 RFVPASGRRSIQQHVFTLLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIAS 61
R + A G Q + ++L+ C NNIQ IH+ ++ NG+ + +L Y+
Sbjct: 123 REMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKC 182
Query: 62 DQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQ----------------- 104
+ ++A F + WN +I Y R KS+E +R
Sbjct: 183 KEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLI 242
Query: 105 --------------MVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVF 150
MV+ E + T+S L L+ G Q+HG VL G S+ +
Sbjct: 243 QCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGY 302
Query: 151 VETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRN 210
+ ++L+ Y G +++A + + ++ G+F V + P
Sbjct: 303 IRSSLVEMYGKCGRMDKASTIL-----------KDVPLNFLRKGNFG----VTCKEPKAR 347
Query: 211 VVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHW 270
+VSW++M++G G+ + + F M + G L+ G+ IH
Sbjct: 348 MVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHA 407
Query: 271 YVQQ---RIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAF 327
Y+Q+ RI A + ++LI MY+ G + DA +F ++ + + V WTSMI
Sbjct: 408 YIQKIGLRIDAY--------VGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGC 459
Query: 328 AKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTW 387
A G GKEA+ LF+ M++ G + P+ +T + VL AC H G ++EG R F M T+
Sbjct: 460 ALHGQGKEAISLFEGMLNLG-----IIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTY 514
Query: 388 GISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVV 447
I+P +EHY MV+L RAG L EA I + ++W + L C++HKN + V
Sbjct: 515 HINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSV 574
Query: 448 EPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVV 507
L+ +D A +LLSN+ + +W + VR M + GVKK PGQSW+Q+ +
Sbjct: 575 SEMLLQSAPSDPDA--YILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQI 632
Query: 508 HDFVAGDMTHKHSYFIYEILSEII 531
H F GD +H IY L +I
Sbjct: 633 HSFTVGDRSHPQDKEIYSYLDSLI 656
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 211/441 (47%), Gaps = 34/441 (7%)
Query: 31 NLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYA 90
+L +H G Q N LL+ Y+ S L HAHKLF I + +T W +I G+A
Sbjct: 50 SLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFA 109
Query: 91 RSHTPWKSV-ECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNV 149
R+ + V +R+M + A PN +T S +L C R ++ G+ +H +L G +V
Sbjct: 110 RAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDV 169
Query: 150 FVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR 209
+E ++++ Y E A F+ M ++ VVSWN ++ Y+ GD + + +F P +
Sbjct: 170 VLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK 229
Query: 210 NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIH 269
+VVSW T+I G Q G + AL M E +++GR +H
Sbjct: 230 DVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLH 289
Query: 270 WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDA----------------YQVFTKMP 313
R++ + ++L+ MY CG + A + V K P
Sbjct: 290 ----GRVLTFGLNSDGY-IRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEP 344
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ VSW+SM+ + G ++ + F++MV + VD +R T+ ++ AC +AG +
Sbjct: 345 KARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVD-IR----TVATIISACANAGIL 399
Query: 374 DEGRRIFASMNRTWGISPRIEHY--GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGAL 431
+ G++I A + + I RI+ Y ++D+ S++G LD+A + E + +PN LW ++
Sbjct: 400 EFGKQIHAYIQK---IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSM 455
Query: 432 LGGCQIH-KNSELASVVEPKL 451
+ GC +H + E S+ E L
Sbjct: 456 ISGCALHGQGKEAISLFEGML 476
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 262/527 (49%), Gaps = 59/527 (11%)
Query: 45 SQKTNII-TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYR 103
+QK+ I+ T ++S YI ++++ A +LF+ + + WN +I GYAR+ ++++ +
Sbjct: 104 AQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFG 163
Query: 104 QMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRG 163
+M E N +++ +++A G + + E++ + + +V T ++ + G
Sbjct: 164 RM----PERNVVSWNTVMTALAHCGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNG 215
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
V+ AR VFD M R+VVSWN+++AGY G FD A ++F+ MP R++ SW TM+ G Q
Sbjct: 216 RVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQ 275
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL------------------- 264
G +A LF M + V LKL
Sbjct: 276 NGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVT 335
Query: 265 -------------GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
G+ IH +++++ Q S + +ALI+MY+ CG A ++F
Sbjct: 336 VLGACSDLAGLPEGQQIH-----QMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDD 390
Query: 312 --MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
++W MI A+A G G EA+ LF M G + + +T + +L AC H
Sbjct: 391 GLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELG-----FQANDVTYVGLLTACSH 445
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
AG DEG + F + + I R +HY C++DL RAG LDEA +IE + + + +LWG
Sbjct: 446 AGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWG 505
Query: 430 ALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIE 489
ALL GC +H N+++ +V K V +++ + A YL L SN+YA ++ VR KM +
Sbjct: 506 ALLAGCSVHGNADIGKLVADK-VLKMEPENADTYL-LASNMYASVGMREEAANVRMKMKK 563
Query: 490 MGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
G+KK PG SWI + V FV D +H +E+L ++ H
Sbjct: 564 KGLKKQPGCSWIDVGNTVQVFVVNDKSHSQ----FEMLKYLLLDLHT 606
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 173/358 (48%), Gaps = 25/358 (6%)
Query: 29 IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRG 88
QN ++I S L+ + +S ++ A K+F + + +W +I G
Sbjct: 27 FQNNLRIRSSSTAT-LTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISG 85
Query: 89 YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN 148
Y + ++ + + + +A+ + ++ ++S ++ + E E++ + V+ N
Sbjct: 86 YIKCGLINEARKLFDR---PDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVR----N 138
Query: 149 VFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPI 208
V +I+ YA G ++A +F M +R+VVSWN+++ CG D A R+F+EM
Sbjct: 139 VVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRE 198
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
R+VVSWTTM+AG ++ GR A +F +M V LKL
Sbjct: 199 RDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLF--- 255
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
+R+ R+ PS N ++ + G + A Q+F MPQ++ ++WT+M+ +
Sbjct: 256 -----ERMPERD--MPSW---NTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYV 305
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+ GL +EAL LF M ++ DG++P T + VL AC + EG++I +++T
Sbjct: 306 QHGLSEEALKLFNKMQAN----DGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKT 359
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 58/241 (24%)
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
G + AR+VFDEM R+ WTTMI+G + G +A LF
Sbjct: 59 GKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFD------------------ 100
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
R Q SV + A++ Y I +A ++F +MP
Sbjct: 101 -------------------------RPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMP 135
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
R+ VSW +MI +A+ G +EAL LF M + ++ V+ A H G +
Sbjct: 136 VRNVVSWNTMIDGYARNGRTQEALDLFGRM---------PERNVVSWNTVMTALAHCGRI 186
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
D+ R+F M +S + MV LS+ G +D A + + MP++ N W A++
Sbjct: 187 DDAERLFNEMRERDVVS-----WTTMVAGLSKNGRVDAAREVFDKMPIR-NVVSWNAMIA 240
Query: 434 G 434
G
Sbjct: 241 G 241
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 17/217 (7%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFY 58
L + G + T+L +C+++ L QIH + + T +++ L++ Y
Sbjct: 316 LFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMY 375
Query: 59 IASDQLQHAHKLFST--IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
A K+F + WN +I YA +++ + +M + N T
Sbjct: 376 SKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVT 435
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE------TNLINFYAGRGGVEQARH 170
Y LL+AC GL EG + +L N +++ T LI+ G +++A +
Sbjct: 436 YVGLLTACSHAGLFDEGFKYFDELL-----KNRYIQVREDHYTCLIDLCGRAGRLDEALN 490
Query: 171 VFDGMGQRSVVS-WNSILAGYVSCGDFDGARRVFDEM 206
+ +G+G+ +S W ++LAG G+ D + V D++
Sbjct: 491 IIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKV 527
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 264/568 (46%), Gaps = 53/568 (9%)
Query: 15 IQQHVF-TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITK-LLSFYIASDQLQHAHK 69
+ H+ TLL+ C++ ++ + +H + L G + T +I L+ Y A K
Sbjct: 43 LSSHILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARK 102
Query: 70 LFSTIDNPSTTVWNHIIRGYAR-----------SHTPWKSVECYRQMVSTEAEP------ 112
+F +D + WN++I GY + P K + MV A
Sbjct: 103 VFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEA 162
Query: 113 --------------NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINF 158
N FT++ +L CV+ Q+HG V+V G+ SNV V +++++
Sbjct: 163 LRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDA 222
Query: 159 YAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMI 218
YA G +E A +FD M R + +W ++++GY CGD D A +F +MP +N SWT +I
Sbjct: 223 YAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALI 282
Query: 219 AGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVA 278
G A+ G +AL +F +M RV LK G+ IH + +
Sbjct: 283 GGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAF-----LL 337
Query: 279 RNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGLGKEAL 337
RN +P+ + +A++ MYA CG + A ++F + V W +MI A A G GKEA+
Sbjct: 338 RNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAV 397
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYG 397
+ M+ GV+P+ TL+ +L AC H+G V +G + F SM G+ P +EHY
Sbjct: 398 LMLNDMLK-----SGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYA 452
Query: 398 CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA-ELD 456
++DLL RAG E+ + + KP D + +LL C+ + + + V L+ +
Sbjct: 453 HLIDLLGRAGCFVESMKDLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPH 512
Query: 457 TDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMT 516
+ A G LLS+IYA W V R M E +++ SWI+I VH F D
Sbjct: 513 SSAAYG---LLSSIYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGL 569
Query: 517 HKHSYFIYEILSEIIKQSHVDSYEPDIT 544
H +Y L + Q ++ P +T
Sbjct: 570 HPLKETLYSALGHLNNQ--IEDNAPYLT 595
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 247/524 (47%), Gaps = 41/524 (7%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
V T + I+ Q H+ V+ + I+ ++ Y + + + K+F +
Sbjct: 331 VLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERD 390
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN II + ++ +++ +M + + T + LLSA L G+Q H
Sbjct: 391 AVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHA 450
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
++ +G +E+ LI+ YA G + A +F+ +C
Sbjct: 451 YLIRRG-IQFEGMESYLIDMYAKSGSIRTAELLFEQ-----------------NCSS--- 489
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
R+ +W +IAG Q G ++A+ L +M V
Sbjct: 490 ---------DRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSS 540
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
G + L R +H + +R + +N V + +L Y+ CG I A VF + P++++V
Sbjct: 541 MGSMGLARQLHGFSIRRFLEKN-----VYVGTSLTDTYSKCGAISYAENVFLRTPEKNSV 595
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
++T+M+M + + G+GK AL L+ +M+ G +RPDA+T + +L AC ++G VDEG +
Sbjct: 596 TYTTMMMCYGQHGMGKRALTLYDSMLRSG-----IRPDAVTFVAILSACNYSGLVDEGLQ 650
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPND-ALWGALLGGCQI 437
IF SM + I P IEHY C+ D+L R G + EA+ ++ + N +WG+LLG C+
Sbjct: 651 IFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRN 710
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H + EL V KL+ AGY VLLSNIYA W+ V VR++M E G+ K G
Sbjct: 711 HGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETG 770
Query: 498 QSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEP 541
SW++I G V+ FV+ D H S IY +L + Y+P
Sbjct: 771 CSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKP 814
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 170/390 (43%), Gaps = 50/390 (12%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ LL+ Y AS Q ++A +F + + WN +I + + + ++VE + M++
Sbjct: 158 VYNSLLNMY-ASCQHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQS 216
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG--YCSNVFVETNLINFYAGRGGVEQ 167
P+ T+ L A + G R + +G + G Y S+VFV ++ I ++ G ++
Sbjct: 217 VMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDY 276
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
AR VFD ++ WN+++ YV + P+ + + + +++G C
Sbjct: 277 ARMVFDRCLNKNTEIWNTMIVAYVQ-----------NNCPVEAIDVFIQALE--SEEGVC 323
Query: 228 KQA--LSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
LS+ + + + +KL H +V + +
Sbjct: 324 DDVTLLSVLTAVSQLQ-------------------QIKLAEQFHAFVIKSLPGS-----L 359
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
+ + NA++ MY+ C + + +VF KM +R VSW ++I AF + G +EAL L M
Sbjct: 360 IIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQK 419
Query: 346 DGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSR 405
+D V A+ L A + + G++ A + R +E Y ++D+ ++
Sbjct: 420 QKFLIDSVTATAL-----LSAASNLRNLYVGKQTHAYLIRRGIQFEGMESY--LIDMYAK 472
Query: 406 AGFLDEAHGLIE-NMPLKPNDALWGALLGG 434
+G + A L E N + A W A++ G
Sbjct: 473 SGSIRTAELLFEQNCSSDRDQATWNAIIAG 502
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 153/362 (42%), Gaps = 46/362 (12%)
Query: 64 LQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLS 122
+ +A +F N +T +WN +I Y +++ P ++++ + Q + S E + T +L+
Sbjct: 274 MDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLT 333
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
A + ++ EQ H V+ S + + ++ Y+ V+ + VFD M +R VS
Sbjct: 334 AVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVS 393
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
WN+I++ +V G FDE +AL L EM++ +
Sbjct: 394 WNTIISAFVQNG--------FDE-----------------------EALMLVCEMQKQKF 422
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+L +G+ H Y+ +R + + + LI MYA G I
Sbjct: 423 LIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGME------SYLIDMYAKSGSI 476
Query: 303 GDAYQVFTK--MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITL 360
A +F + R +W ++I + + GL ++A+ L K M+ V V P+A+TL
Sbjct: 477 RTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQML-----VQNVIPNAVTL 531
Query: 361 IVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP 420
+L AC G + R++ R + + + + D S+ G + A + P
Sbjct: 532 ASILPACSSMGSMGLARQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAISYAENVFLRTP 590
Query: 421 LK 422
K
Sbjct: 591 EK 592
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 158/382 (41%), Gaps = 55/382 (14%)
Query: 63 QLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA--EPNGFTYSFL 120
Q A L ++ PST VWN +I G+ ++ P +++ Y +M S + + +T+S
Sbjct: 64 QPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSST 123
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNV----FVETNLINFYAGRGGVEQARHVFDGMG 176
L AC + G+ +H L +N V +L+N YA E A +VFD M
Sbjct: 124 LKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMR 182
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALS 232
+R+VV+WN+++ +V + A F M ++V V++ + ++ G +
Sbjct: 183 RRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKM 242
Query: 233 LFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNAL 292
+G MR+ GD YV V ++
Sbjct: 243 FYGFMRK-------------------FGD--------QYVSDVFVV-----------SSA 264
Query: 293 IHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDG 352
I M++ G + A VF + ++T W +MI+A+ + EA+ +F + GV
Sbjct: 265 ILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGV-- 322
Query: 353 VRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEA 412
D +TL+ VL A + + A + ++ S I MV + SR +D +
Sbjct: 323 --CDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMV-MYSRCNHVDTS 379
Query: 413 HGLIENMPLKPNDALWGALLGG 434
+ + M L+ + W ++
Sbjct: 380 LKVFDKM-LERDAVSWNTIISA 400
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 21/315 (6%)
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV--EXXXXXXXXXXXXX 256
A + D +P + V W ++I G QAL L+ +MR
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
D+ G+ IH + R + PS + N+L++MYASC A VF M +R+
Sbjct: 128 ALTKDILTGKAIHSHFL-RSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVMRRRN 185
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
V+W ++I++F K +A+ F M++ V P +T + + A G +
Sbjct: 186 VVAWNTLILSFVKMNRYPQAVEAFANMIN-----QSVMPSPVTFVNLFPALSKLG---DS 237
Query: 377 R--RIFASMNRTWGISPRIEHY--GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
R ++F R +G + + + + S G +D A ++ + L N +W ++
Sbjct: 238 RTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYAR-MVFDRCLNKNTEIWNTMI 296
Query: 433 GGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
+N+ ++ + A +G + LLS + A ++ Q I + ++ +
Sbjct: 297 --VAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQ--IKLAEQFHAFVI 352
Query: 493 KKPPGQSWIQINGVV 507
K PG I +N V+
Sbjct: 353 KSLPGSLIIILNAVM 367
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 232/514 (45%), Gaps = 90/514 (17%)
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAG-------- 161
EP F S L+ +C+ + G+Q+H ++ GY S+ F+ +L+NFY+
Sbjct: 76 TEPRLF--SILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAV 133
Query: 162 -----------------------RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
G +E A+++FD M +R+V +WN+++ G V G +
Sbjct: 134 KLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEE 193
Query: 199 A---------------------------------------------RRVFDEMPIRNVVS 213
A R+ MP N+V+
Sbjct: 194 ALLFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKWMPNCNLVA 253
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W T++AG AQ L + M+ A L G+ IH V
Sbjct: 254 WNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEV- 312
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ V + ++L+ MY+ CG + D+ + F + +R V W+SMI A+ G
Sbjct: 313 ----IKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQC 368
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRI 393
++A+ LF + + + + +T + +L AC H+G D+G F M +G+ R+
Sbjct: 369 EKAIKLF-----NDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARL 423
Query: 394 EHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVA 453
EHY C+VDLL R+G L+EA +I +MP+ + +W LL C+IHKN E+A V + V
Sbjct: 424 EHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEE-VL 482
Query: 454 ELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAG 513
+D A Y VL++ I+A AKRWQ+V VR+ M + VKK PG SW+++ VH F G
Sbjct: 483 RIDPQDPASY-VLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHMG 541
Query: 514 DMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
D +H I + L E+ + + Y PDI+
Sbjct: 542 DESHSKFVEINQYLEELTSEMKMQGYVPDISSVL 575
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 225 bits (574), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/510 (28%), Positives = 245/510 (48%), Gaps = 55/510 (10%)
Query: 5 RFVPASGRRSIQQHVFT---LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFY 58
RFV + ++ FT +L++C L+ +IH ++ +G I+ L+ Y
Sbjct: 222 RFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMY 281
Query: 59 IASDQLQHAHKLF-----STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN 113
+ L A K+F ++ + S +WN ++ G+ + +++ M + +
Sbjct: 282 SSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFD 341
Query: 114 GFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFD 173
+T+S +L C+ L QVHG V+ GY + V + LI+ YA +G +
Sbjct: 342 FYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSI-------- 393
Query: 174 GMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
+ A R+F+ +P ++VV+W+++I GCA+ G K A SL
Sbjct: 394 -----------------------NNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSL 430
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F +M ++ + G+ +H + + + + ALI
Sbjct: 431 FMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVH-----SLCLKKGYESEGVVTTALI 485
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MYA CG I DA +F + + T+SWTS+I+ A+ G +EA+ L M+ G
Sbjct: 486 DMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGT----- 540
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+P+ IT++ VL AC H+G V+E +F S+ G+ P EHY CMVD+L +AG +EA
Sbjct: 541 KPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAV 600
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
LI MP KP+ +W +LLG C +KN +LA++V L+A D ++LSN+YA
Sbjct: 601 KLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPED--VSVYIMLSNVYAA 658
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
W V VR+ + ++G KK G+ + +I
Sbjct: 659 LGMWDSVSKVRETVKKIG-KKRAGKIFYEI 687
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 194/426 (45%), Gaps = 25/426 (5%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
+I+N +HS ++ +G I+ ++S Y + A +F + + + W ++
Sbjct: 18 SIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77
Query: 88 GYARSHTPWKSVECYRQMVSTEAE-PNGFTYSFLLSACVRGGLLRE---GEQVHGIVLVK 143
S P +++ Y +M+ ++ E PN F YS +L AC GL+R G+ VH +
Sbjct: 78 VLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC---GLVRNVELGKMVHYHIFQA 134
Query: 144 GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVF 203
++ + L++ Y G + A+ VF + ++ SWN+++ GY G D A ++F
Sbjct: 135 KLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLF 194
Query: 204 DEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK 263
D+MP ++VSW ++IAG +AL M ++ +L
Sbjct: 195 DKMPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELM 253
Query: 264 LGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVS---- 319
LGR IH Y + ++ + S +ALI MY+SC ++ +A ++F + + S+VS
Sbjct: 254 LGREIHCY-----IIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLA 308
Query: 320 -WTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
W SM+ G EAL + M GVR D T +VL C + + +
Sbjct: 309 LWNSMLSGHVVNGDYVEALSMISHM-----HRSGVRFDFYTFSIVLKICMNFDNLSLASQ 363
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
+ + T G ++D+ ++ G ++ A L E +P K A W +L+ GC
Sbjct: 364 VHGFV-ITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVA-WSSLITGCARF 421
Query: 439 KNSELA 444
+ +LA
Sbjct: 422 GSDKLA 427
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 73/344 (21%)
Query: 124 CVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
C+R ++ + +H ++ G+C+++F+ N+I+ Y+ + AR++FD M R++V
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIV-- 70
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVE 243
SWTTM++ +ALSL+ EM +++E
Sbjct: 71 -----------------------------SWTTMVSVLTNSSMPHEALSLYNEMIESKIE 101
Query: 244 XXXXXXXXXXXXXX-XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+++LG+ +H+++ Q + + L NAL+ MY CG +
Sbjct: 102 QPNQFLYSAVLKACGLVRNVELGKMVHYHIFQA-----KLDVDIVLMNALLDMYVKCGSL 156
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTM--------------VSDGA 348
DA +VF ++P ++ SW ++I+ +AKQGL +A+ LF M + D A
Sbjct: 157 RDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA 216
Query: 349 GV-----------DGVRPDAITLIVVLCACCHAGFVDE---GRRIFASMNRTWGISPRIE 394
G++ D T VL AC G DE GR I + ++ G
Sbjct: 217 SSRALRFVSMMHGKGLKMDEFTFPSVLKAC---GCSDELMLGREIHCYIIKS-GFESSCY 272
Query: 395 HYGCMVDLLSRAGFLDEAHGLIE----NMPLKPNDALWGALLGG 434
++D+ S L EA + + N + + ALW ++L G
Sbjct: 273 CISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSG 316
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 189/465 (40%), Gaps = 71/465 (15%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+L++C ++N+ +H + L ++ LL Y+ L+ A ++F I
Sbjct: 110 AVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCK 169
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQM------------------VSTEA--------- 110
+ T WN +I GYA+ +++ + +M S+ A
Sbjct: 170 NATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHG 229
Query: 111 ---EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQ 167
+ + FT+ +L AC L G ++H ++ G+ S+ + + LI+ Y+ + +
Sbjct: 230 KGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSE 289
Query: 168 ARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRC 227
A +FD + S VS ++ W +M++G G
Sbjct: 290 ATKIFDQYFRNSSVS--------------------------ESLALWNSMLSGHVVNGDY 323
Query: 228 KQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVR 287
+ALS+ M R+ V +L L +H +V + +
Sbjct: 324 VEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFV-----ITSGYELDCV 378
Query: 288 LNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+ + LI +YA G I +A ++F ++P + V+W+S+I A+ G K A LF M+
Sbjct: 379 VGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIH-- 436
Query: 348 AGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAG 407
G++ D + +VL AC G+++ S+ G ++D+ ++ G
Sbjct: 437 ---LGLQIDHFVISIVLKACSSLASHQHGKQVH-SLCLKKGYESEGVVTTALIDMYAKCG 492
Query: 408 FLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLV 452
+++A L + + + W +++ GC + +E A + K++
Sbjct: 493 DIEDALSLFGCLS-EIDTMSWTSIIVGCAQNGRAEEAISLLHKMI 536
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 160/529 (30%), Positives = 249/529 (47%), Gaps = 64/529 (12%)
Query: 21 TLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
T+ + IQ+L+ IH + + G + ++S YI + A K+F +
Sbjct: 131 TISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQR 190
Query: 78 STTVWNHIIRG--------YARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG-G 128
+ +N II G Y+ W +R+M + FT + LL C G
Sbjct: 191 NVGSFNVIISGCAALGNLDYSLYADLWN---FFRRMQCQGYNADAFTVASLLPMCCDSDG 247
Query: 129 LLREGEQVHGIVLVKGY----CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWN 184
G ++H ++ G CS+V + ++LI+ Y+ + V+S
Sbjct: 248 KFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYS--------------RSNKLVLS-- 291
Query: 185 SILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM-RRARVE 243
RRVFD+M RN+ WT MI G Q G + AL LF EM R+ R+
Sbjct: 292 ---------------RRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIR 336
Query: 244 XXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIG 303
L G+ +H + + + + L NALI MYA CG +
Sbjct: 337 PNRVSLVSVLPACGLLVGLMGGKQVHAFS-----IKMEFNDYISLRNALIDMYAKCGSLD 391
Query: 304 DAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
A +VF + ++W+S+I A+ G G+EAL + M+ G ++PD IT++
Sbjct: 392 YARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQG-----IKPDMITVVG 446
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
VL ACC +G VDEG I+ S+ + + P +E GC+VDLL R+G LD+A I MP+
Sbjct: 447 VLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPII 506
Query: 423 PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIA 482
P ++WG+LL IH NS + + + + EL+ + + Y + LSN YA ++RW ++
Sbjct: 507 PGPSVWGSLLTASVIHGNS-MTRDLAYRCLLELEPENPSNY-ISLSNTYASSRRWDEITE 564
Query: 483 VRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEII 531
VR M E G++K PG SWI I+ H F D H S IYE+L +++
Sbjct: 565 VRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLDDLV 613
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 181/437 (41%), Gaps = 53/437 (12%)
Query: 14 SIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFST 73
SI H L Q C HSQ++ N SQ + T+L+S Y + +F +
Sbjct: 36 SIDLHSLKLTQQC---------HSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDS 86
Query: 74 IDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREG 133
+ + +WN +I GY ++H ++ +RQM P+ +T + + L G
Sbjct: 87 VHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM-GRCLLPDDYTLATISKVSGEIQDLVLG 145
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
+ +HG L G+ S++ V ++++ Y A VFD M QR+V S+N I
Sbjct: 146 KLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVI------- 198
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQAL--SLFGEMRRARVEXXXXXXXX 251
I+GCA G +L L+ RR + +
Sbjct: 199 ------------------------ISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFT 234
Query: 252 XXXXX----XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
G GR +H Y+ + + + V + ++LI MY+ + + +
Sbjct: 235 VASLLPMCCDSDGKFDHGRELHCYLVKNGLDL-KMCSDVHMGSSLIDMYSRSNKLVLSRR 293
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF +M R+ WT+MI + + G + AL LF+ M D +RP+ ++L+ VL AC
Sbjct: 294 VFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRK----DRIRPNRVSLVSVLPAC 349
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
+ G+++ A + + I ++D+ ++ G LD A + +N +
Sbjct: 350 GLLVGLMGGKQVHA-FSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAIT 408
Query: 428 WGALLGGCQIHKNSELA 444
W +++ +H + A
Sbjct: 409 WSSIISAYGLHGKGQEA 425
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 176/434 (40%), Gaps = 75/434 (17%)
Query: 85 IIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG 144
+ R ++R+ + ++ Y P+ + LS + L+ +Q H +L
Sbjct: 3 LTRTFSRTTSRYR----YHTSAIVSLSPHNLLHLLQLSIDLHS--LKLTQQCHSQILTNC 56
Query: 145 YCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFD 204
+ N F+ T LI+ YA G +SI++ + VFD
Sbjct: 57 FSQNAFLTTRLISAYATFG--------------------DSIMS-----------KLVFD 85
Query: 205 EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL 264
+ +NV W ++I G + + A+ LF +M R + DL L
Sbjct: 86 SVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRCLLPDDYTLATISKVSGEIQ-DLVL 144
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMI 324
G+ IH R + + N+++ MY C GDA +VF +MPQR+ S+ +I
Sbjct: 145 GKLIHGK-----SLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVII 199
Query: 325 MAFAKQG-----LGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA-GFVDEGRR 378
A G L + F+ M G DA T+ +L CC + G D GR
Sbjct: 200 SGCAALGNLDYSLYADLWNFFRRM-----QCQGYNADAFTVASLLPMCCDSDGKFDHGRE 254
Query: 379 IFASMNRTWGISPRI---EHYG-CMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+ + + G+ ++ H G ++D+ SR+ L + + + M + N +W A++ G
Sbjct: 255 LHCYLVKN-GLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSR-NIYVWTAMING 312
Query: 435 CQIHKNSELASV----------VEPKLVAELDTDGAAGYLVLL---SNIYAFAKR--WQD 479
+ E A + + P V+ + A G LV L ++AF+ + + D
Sbjct: 313 YVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFND 372
Query: 480 VIAVRQKMIEMGVK 493
I++R +I+M K
Sbjct: 373 YISLRNALIDMYAK 386
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 238/502 (47%), Gaps = 50/502 (9%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++L+SC +++ + IH V G + T LL Y + A K+F +
Sbjct: 107 VSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMP 166
Query: 76 NPSTTVWNHIIRGYAR-----------SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSAC 124
+ + WN ++ GY + P K V + MVS
Sbjct: 167 DKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVS----------------- 209
Query: 125 VRGGLLREGEQVHGIVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVSW 183
G + G+ L + F N +I Y G + +AR +FD M +R+ VS
Sbjct: 210 ---GYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSL 266
Query: 184 NSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR--AR 241
+++AGY GD AR +FD+M ++++S+ MIA AQ + K+AL LF M + +
Sbjct: 267 ITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSS 326
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
+ G+L+ RWI + + + L ALI +YA CG
Sbjct: 327 LHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDH-----LATALIDLYAKCGS 381
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLI 361
I AY++F + +R V++++MI G +A+ LF+ M + + P+ +T
Sbjct: 382 IDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGEC-----IIPNLVTYT 436
Query: 362 VVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPL 421
+L A HAG +EG R F SM GI P ++HYG MVDLL RAG+LDEA+ LI MP+
Sbjct: 437 GILTAYNHAGLAEEGYRCFISMKDN-GIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPM 495
Query: 422 KPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVI 481
+PN +WGALL C++H N +L + + +L+++ AGY LLS IYA +W D
Sbjct: 496 QPNVGVWGALLLACRLHDNLKLGEIAVQHCI-KLESE-TAGYYSLLSGIYATVGKWNDAK 553
Query: 482 AVRQKMIEMGVKKPPGQSWIQI 503
+ + + K PG SW Q+
Sbjct: 554 KLTTGVEGKKIIKIPGCSWTQL 575
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 215/445 (48%), Gaps = 37/445 (8%)
Query: 21 TLLQSCNNIQNLIQIHSQVVLNGLSQKTNIIT-----------KLLSFYIASDQLQHAHK 69
TL++ C+ +++ QIH+Q++ N L+ I K +S YI S
Sbjct: 8 TLMKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILS-------- 59
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL 129
+ + NP + W +IR +++ ++V Y QM P+ S +L +C R
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVED 119
Query: 130 LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAG 189
G +HG V G+ + V+V+T L++ Y G V AR VFD M ++VVSWNS+L+G
Sbjct: 120 DLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSG 179
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXX 249
Y+ G+ D +R FDE+P+++V+SW M++G A+ G+ +A LF +M
Sbjct: 180 YIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNF------- 232
Query: 250 XXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVF 309
G + G + + + ++ SV L +I Y+ G + A ++F
Sbjct: 233 --ASWNTMITGYVDCGSIVE---ARELFDAMPRRNSVSLIT-MIAGYSKSGDVHSARELF 286
Query: 310 TKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCH 369
+M + +S+ +MI +A+ KEAL LF M+ + + PD +TL V+ AC
Sbjct: 287 DQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDS---SLHPDKMTLASVISACSQ 343
Query: 370 AGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G ++ R I + +N +GI ++DL ++ G +D+A+ L + K + +
Sbjct: 344 LGNLEHWRWIESQIN-NFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLR-KRDVVAYS 401
Query: 430 ALLGGCQIHKNSELASVVEPKLVAE 454
A++ GC I+ + A + ++ E
Sbjct: 402 AMIYGCGINGRASDAVELFERMAGE 426
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 222 bits (565), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 255/532 (47%), Gaps = 53/532 (9%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+ +C ++++I ++ + + +G ++ ++L ++ + ++ A F +
Sbjct: 129 LISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERD 188
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
++ W +I G S ++ E + M T++ ++ A R + G Q+H
Sbjct: 189 SSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEVGRQIHT 248
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+L + + FV+ LI+ Y+ CG+ +
Sbjct: 249 CILKRAVNGDPFVDCALIDMYS-------------------------------KCGNIED 277
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
AR VFD+MP + V W T+IAG A +G ++AL ++ +MR + +
Sbjct: 278 ARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICAR 337
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L+ G+ H + +R + + N+AL++ Y+ G + +A VF KM +++ +
Sbjct: 338 LASLEHGKQGHAALVRRGFGTD-----LVANSALVNFYSKWGRMENARHVFDKMHRKNII 392
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SW ++I + G G+EA+ +F+ M+ + + P+ +T + VL AC ++G + G
Sbjct: 393 SWNALIAGYGHHGRGEEAIEMFEKMLQEN-----MTPNHVTFLAVLSACSYSGLSERGWE 447
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
IF SM++ I PR HY CM++LL R G LDEA LI N P P +W ALL C++H
Sbjct: 448 IFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMH 507
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
KN EL KL ++ + Y++LL NIY + + ++ V Q + G++ P
Sbjct: 508 KNLELGKFAAEKLYG-MEPEKLCNYVMLL-NIYNSSGKLKEAADVLQTLKRKGLRMLPAY 565
Query: 499 SWIQINGVVHDFVAGDMTHKHSYFIYE----ILSEIIKQSHVDSYE---PDI 543
+WI++N H F+ GD +HK + IY+ ++ EI + +V E PD+
Sbjct: 566 TWIEVNKQPHAFLCGDKSHKQTKKIYKKVDSLMVEISRHGYVMEKETLLPDV 617
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
V T+ ++++ Q H+ +V G + L++FY ++++A +F + +
Sbjct: 331 VITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKN 390
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
WN +I GY +++E + +M+ PN T+ +LSAC GL G ++
Sbjct: 391 IISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEI 448
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 230/483 (47%), Gaps = 58/483 (12%)
Query: 73 TIDNPSTTV-WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
IDN + +N ++ S ++VE +MV + TY ++ C + L
Sbjct: 185 NIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLG 244
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
G QVH +L G +VFV + L++ + G V AR VFDG+ R+VV W S++ Y+
Sbjct: 245 LGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYL 304
Query: 192 SCGDFDGARRVFD----EMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
G+F+ + E + N ++ ++ A + G++ ARVE
Sbjct: 305 QNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRH-----GDLLHARVE---- 355
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
KLG ++ R++ + NALI+MY+ CG I +Y
Sbjct: 356 ---------------KLG------IKNRVI----------VGNALINMYSKCGCIDSSYD 384
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF M R ++W +MI +++ GLGK+AL LF+ M+S G P+ +T + VL AC
Sbjct: 385 VFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC-----PNHVTFVGVLSAC 439
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
H V+EG + + + + P +EHY C+V +L RAG L+EA + +K +
Sbjct: 440 AHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVA 499
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
W LL C IH+N L + + + + ++D Y LLSN+YA A+ W V +R+ M
Sbjct: 500 WRVLLNACNIHRNYNLGTKI-AETILQMDPRDMGTY-TLLSNMYAKARSWDSVTMIRKMM 557
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIY---EILSEIIKQSHVDSYEPDIT 544
E VKK PG SWI+I VH F + H IY ++L E+IKQ Y P+I
Sbjct: 558 RERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQL---GYVPNIE 614
Query: 545 GAF 547
Sbjct: 615 AVL 617
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 181/418 (43%), Gaps = 58/418 (13%)
Query: 35 IHSQVVLNGLS------QKTNII--TKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHII 86
IH+Q+++ S ++ NII L++ Y+ +L+ A LF + S +N ++
Sbjct: 34 IHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLM 93
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
GY S + V+ ++ MVS+ +PN + ++ +LSAC G + EG Q HG + G
Sbjct: 94 GGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLV 153
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGM-----GQRSVVSWNSILAGYVSCGDFDGARR 201
+ FV+++L++ Y+ V+ A V + +NS+L V G A
Sbjct: 154 FHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVE 213
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD 261
V M VV W + + + G C G++R D
Sbjct: 214 VLGRMVDEGVV-WDS-VTYVSVMGLC-------GQIR----------------------D 242
Query: 262 LKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWT 321
L LG +H + + V + + L+ M+ CG + A +VF + R+ V WT
Sbjct: 243 LGLGLQVHAQ-----LLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWT 297
Query: 322 SMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA 381
S++ A+ + G +E L L M +G + T V+L A + G + A
Sbjct: 298 SLMTAYLQNGEFEETLNLLSCM-----DREGTMSNEFTFAVLLNAFAGMAALRHGDLLHA 352
Query: 382 SMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL-WGALLGGCQIH 438
+ + GI R+ ++++ S+ G +D ++ + +M + D + W A++ G H
Sbjct: 353 RVEKL-GIKNRVIVGNALINMYSKCGCIDSSYDVFFDM--RNRDIITWNAMICGYSQH 407
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 126/301 (41%), Gaps = 27/301 (8%)
Query: 179 SVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR 238
+++ NS++ YV C AR +FDEM +R+VVS+ ++ G G + + LF M
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
+ + G + G H ++ + + + S +L+HMY+
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKS-----SLVHMYSK 168
Query: 299 CGVIGDAYQVFTKM-----PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
C + A QV + S++ A + G EA+ + MV +GV
Sbjct: 169 CFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVD-----EGV 223
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
D++T + V+ C + G ++ A + + G++ + +VD+ + G + A
Sbjct: 224 VWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG-GLTFDVFVGSMLVDMFGKCGDVLSAR 282
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
+ + + N +W +L+ +N E + L++ +D +G +SN + F
Sbjct: 283 KVFDGLQ-NRNVVVWTSLMTA--YLQNGEFEETL--NLLSCMDREGT------MSNEFTF 331
Query: 474 A 474
A
Sbjct: 332 A 332
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/551 (28%), Positives = 259/551 (47%), Gaps = 57/551 (10%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+C N++ + Q H+ V+L G + + +++FY ++ +F ++
Sbjct: 319 FFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLK 378
Query: 79 TTV-WNHIIRGYARSHTPWKSVE-CYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
V WN +I Y + K++E C+ + T S LL+ ++ G+++
Sbjct: 379 DEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKL 438
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQR------------------ 178
HG + + S++ V + +++ YA G ++ AR VF G++
Sbjct: 439 HGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGL 498
Query: 179 ------------------SVVSWNSILAGYVSCGDFDGARRVFDEMPIR----NVVSWTT 216
+VVSWNS++ G+ G A+ +F EM + N+++WTT
Sbjct: 499 SGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTT 558
Query: 217 MIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRI 276
MI+G AQ G +A +F +M+ A + L GR IH YV
Sbjct: 559 MISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVM--- 615
Query: 277 VARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEA 336
RN S+++ ++I MYA CG + DA VF + + +MI A+A G EA
Sbjct: 616 --RNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEA 673
Query: 337 LGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHY 396
L LF+ +V G + PD IT VL AC H + EG +F M + P +HY
Sbjct: 674 LALFQELVKQG-----IMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHY 728
Query: 397 GCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELD 456
GC+V LL+ G LDEA +I MP P+ + G+LL C + +ELA+ + K + +++
Sbjct: 729 GCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIA-KWLLKVE 787
Query: 457 TDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMT 516
+ Y V LSN+YA +W +V +R M E G+KK PG SWI++ ++ F+A D +
Sbjct: 788 PNNPGNY-VALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKS 846
Query: 517 HKHSYFIYEIL 527
H IY+IL
Sbjct: 847 HPEKEEIYKIL 857
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 59/399 (14%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNP--STTVWNHIIRGYARSHTPWKSVECYRQM-V 106
+ T L+ Y L+ A K+F + N + VWN +I GY ++ ++V + +M
Sbjct: 246 VATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRF 305
Query: 107 STEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVE 166
EP+ + S SAC + EG+Q H +V++ G+ N + ++++NFY+ G +E
Sbjct: 306 EGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIE 365
Query: 167 QARHVFDGMG-QRSVVSWNSILAGYVSCGDFDGARRVF----DEMPIR-NVVSWTTMIAG 220
+ VF M + V+WN +++ YV G F+ A + +E +R + V+ ++++A
Sbjct: 366 EVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLAL 425
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
A D+KLG+ +H + RN
Sbjct: 426 AAD-----------------------------------TRDVKLGKKLHGF-----CIRN 445
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKM-PQRSTVSWTSMIMAFAKQGLGKEALGL 339
+ + + + ++ MYA CG++ A VF ++ V W +M+ A A++GL EAL L
Sbjct: 446 EFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKL 505
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM 399
F M ++ V P+ ++ ++ G V E + +F+ M + G++P + + M
Sbjct: 506 FFQM-----QMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-GVTPNLITWTTM 559
Query: 400 VDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGC 435
+ L++ G EA + + M ++PN + L C
Sbjct: 560 ISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSAC 598
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 172/402 (42%), Gaps = 73/402 (18%)
Query: 52 TKLLSFYIASDQ--LQHA--HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVS 107
T+LL+ + S+ L H H F T + T +H I ++ +++ Q+
Sbjct: 42 TQLLTTHSYSNPPILNHTPKHNFFPT----TNTTLHHQISFLCKNLKLQEAISTLSQLPQ 97
Query: 108 -TEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKG--YCSNVFVETNLINFYAGRGG 164
T P+ Y LL CV L G Q+H ++ KG Y +N FVE+ L+ YA
Sbjct: 98 HTPIGPD--IYGELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNL 155
Query: 165 VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQK 224
A H F R+VV N L Y + ++ E ++S+ M+ +K
Sbjct: 156 TRVAVHFF-----RNVVK-NQNLFSYAAIVGLQARNGLYKEA----LLSYVEMM----EK 201
Query: 225 GRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLK---LGRWIHWYVQQRIVARNQ 281
G C + ++ G L+ GR IH +V + N+
Sbjct: 202 GFCPDNFVVPNGLKAC-------------------GGLRWIGFGRGIHGFV---VKMGNE 239
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMP--QRSTVSWTSMIMAFAKQGLGKEALGL 339
V + +L+ MY CGV+ DA +VF +MP +R+ V W SMI+ + + G+ EA+GL
Sbjct: 240 FDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGL 299
Query: 340 FKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFA-------SMNRTWGISPR 392
F+ M +G GV P ++L AC + V+EG++ A +N G S
Sbjct: 300 FEKMRFEG----GVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSS-- 353
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+++ S+ G ++E + +M + ++ W ++
Sbjct: 354 ------IMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISS 389
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 188/438 (42%), Gaps = 77/438 (17%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTN--IITKLLSFYIASDQLQHAHKLF-STID 75
LLQ C ++L +QIH+ ++ G S TN + +KL+ Y + + A F + +
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVK 168
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGL--LREG 133
N + + I+ AR+ +++ Y +M+ P+ F L AC GGL + G
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKAC--GGLRWIGFG 226
Query: 134 EQVHGIVLVKG--YCSNVFVETNLINFYAGRGGVEQARHVFDGMG--QRSVVSWNSILAG 189
+HG V+ G + V+V T+L++ Y G +E A VFD M +R+ V WNS++ G
Sbjct: 227 RGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVG 286
Query: 190 YVSCGDFDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEX 244
YV G A +F++M + VS + + CA ++ G+ A V
Sbjct: 287 YVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEE-----GKQGHALV-- 339
Query: 245 XXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGD 304
+ +G +++ L +++++ Y+ G+I +
Sbjct: 340 -----------------ILMGFELNYV----------------LGSSIMNFYSKVGLIEE 366
Query: 305 AYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVV 363
VF M + V+W MI ++ + G+ ++AL + M + + +R D +TL +
Sbjct: 367 VELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREE----ENLRFDCVTLSSL 422
Query: 364 LCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCM------VDLLSRAGFLDEAHGLIE 417
L V G+++ G R E Y M +D+ ++ G +D A G+
Sbjct: 423 LALAADTRDVKLGKKLH-------GFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFH 475
Query: 418 NMPLKPNDALWGALLGGC 435
K + LW +L C
Sbjct: 476 FAGKKKDIVLWNTMLAAC 493
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 10 SGRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQH 66
+G R + + L +C N+ L IH V+ N +S I T ++ Y L
Sbjct: 582 AGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDD 641
Query: 67 AHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVR 126
A +F V+N +I YA +++ ++++V P+ T++ +LSAC
Sbjct: 642 AKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSH 701
Query: 127 GGLLREGEQV 136
G LL+EG ++
Sbjct: 702 GRLLKEGLEL 711
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/539 (29%), Positives = 258/539 (47%), Gaps = 35/539 (6%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+QSC N++ Q+HS + +G S I LL+FY +L +A KLF + +
Sbjct: 78 LIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRN 137
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
N +I+ Y ++E + + E N T++ +++ V+ GL E +
Sbjct: 138 YMSCNIMIKAYLE----MGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFS 193
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS-----WNSILAG---- 189
+ V G+ + + +F + G R +F G + V+ +NS++
Sbjct: 194 RMNVLGFVPDEY------SFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAH 247
Query: 190 -YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
Y+ G R+ MP N+V+W T++AG AQ + L + M+ A
Sbjct: 248 MYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKIT 307
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
L G+ IH V + V + ++L+ MY+ CG + D+ +
Sbjct: 308 FVSVISSCSELATLCQGKQIHAEV-----IKAGASSVVSVISSLVSMYSKCGSLQDSIKA 362
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F + +R V W+SMI A+ G ++A+ LF + + + + +T + +L AC
Sbjct: 363 FLECEERDVVIWSSMIAAYGFHGQCEKAIKLF-----NDKEKENMAGNEVTFLSLLYACS 417
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
H+G D+G F M +G+ R+EHY C+VDLL R+G L+EA +I +MP+ + +W
Sbjct: 418 HSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIW 477
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
LL C+IHKN E+A V + V +D A Y VL++ I+A AKRWQ+V VR+ M
Sbjct: 478 KTLLSACKIHKNEEMARRVAEE-VLRIDPQDPASY-VLIAGIHASAKRWQNVSEVRRAMK 535
Query: 489 EMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGAF 547
+ VKK PG SW+++ VH F GD +H I + L E+ + + Y PDI+
Sbjct: 536 DKMVKKEPGVSWVEVKNQVHQFHTGDKSHPKFVEINQYLEELTSEMKMQGYVPDISSVL 594
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 165/358 (46%), Gaps = 19/358 (5%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
+S L+ +C+ + G+Q+H ++ G S+ F+ +L+NFY+ G + A +FD M
Sbjct: 75 FSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 134
Query: 177 QRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGE 236
+R+ +S N ++ Y+ G+ + A+ +FDEM RNV +W M+ G + G ++AL LF
Sbjct: 135 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSR 194
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
M L +G +H Y VA+ + + + +L HMY
Sbjct: 195 MNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAY-----VAKCGFEFNSVVGCSLAHMY 249
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
G + + ++ MP + V+W +++ A+ + L + M + G RPD
Sbjct: 250 MKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMM-----KMAGYRPD 304
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFL-DEAHGL 415
IT + V+ +C + +G++I A + + G S + +V + S+ G L D
Sbjct: 305 KITFVSVISSCSELATLCQGKQIHAEVIKA-GASSVVSVISSLVSMYSKCGSLQDSIKAF 363
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLV-LLSNIYA 472
+E + + +W +++ H E A KL + + + AG V LS +YA
Sbjct: 364 LECE--ERDVVIWSSMIAAYGFHGQCEKAI----KLFNDKEKENMAGNEVTFLSLLYA 415
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 219 bits (559), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 243/516 (47%), Gaps = 54/516 (10%)
Query: 21 TLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQ-HAHKLFSTIDN 76
+LL + ++I +L Q HS+V++ GL I L+ Y+ + +A K+F I +
Sbjct: 324 SLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITS 383
Query: 77 PSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQV 136
P+ W +I G+A S + + +M + PN FT S +L AC + L +
Sbjct: 384 PNVMCWTSLIAGFAEKRLE-DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMML 442
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
HG ++ ++ V L++ YAG G +++A W+
Sbjct: 443 HGHIIKTKVDIDIAVANALVDTYAGVGMIDEA--------------WS------------ 476
Query: 197 DGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
V M +R+ +++T + A QKG AL + M ++
Sbjct: 477 -----VIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAA 531
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRS 316
G ++ G+ +H Y ++ Q ++N+L+H+Y+ CG I DA + F + +
Sbjct: 532 AGLGTMETGKQLHCYS-----VKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPD 586
Query: 317 TVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
SW +I F+ GL AL F D + GV+PD+ITL+ ++ AC H G ++ G
Sbjct: 587 AFSWNGLISGFSWNGLISHALSTF-----DDMRLAGVKPDSITLLSLISACSHGGLLELG 641
Query: 377 RRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQ 436
F SM + + I+P+++HY C+VDLL R G L+EA G+IE M KP+ + LL C
Sbjct: 642 LEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACN 701
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
+H N L + + + ELD A YL LL+N+Y A R+ M E G+++ P
Sbjct: 702 LHGNVALGEDMARRCL-ELDPSDPAIYL-LLANLYDNAGLSDFGEKTRRLMRERGLRRSP 759
Query: 497 GQSWIQINGVVHDFVAG------DMTHKHSYFIYEI 526
GQ W++I VH F AG ++T K + I E
Sbjct: 760 GQCWMEIRSRVHHFSAGEKINEDEITEKLEFLITEF 795
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 167/422 (39%), Gaps = 42/422 (9%)
Query: 15 IQQHVFTLLQSCNN--IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFS 72
Q+ +L CN+ ++ I IHS ++ GL + LLS Y + + A LF
Sbjct: 14 FQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFD 73
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+ N W I+ + ++ +++ + M+ + PN FT S L +C G
Sbjct: 74 EMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFER 133
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G Q+H + G N FV T+L+ FY G SV +W +L+
Sbjct: 134 GMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCC-------------SVEAWK-LLSLVKD 179
Query: 193 CGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
GD VVSWTTM++ + G+ +A ++ +M + V
Sbjct: 180 GGD---------------VVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKL 224
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
L G+ +H ++ N + L A++ MY+ C + DA +V
Sbjct: 225 LGAVSSFLGLSYGKLLHAHLIMFGAELN-----LVLKTAVVDMYSKCRRMVDAIKVSNLT 279
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
P+ WT++I F + +EA+ +F+ M + G+ P+ T +L A
Sbjct: 280 PEYDVYLWTTLISGFTQNLQVREAISVFRDM-----ELSGLLPNNFTYSSLLNASSSILS 334
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
+D G + F S G+ + +VD+ + + + PN W +L+
Sbjct: 335 LDLGEQ-FHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLI 393
Query: 433 GG 434
G
Sbjct: 394 AG 395
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 166/406 (40%), Gaps = 55/406 (13%)
Query: 35 IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHT 94
+H+ +++ G + T ++ Y ++ A K+ + +W +I G+ ++
Sbjct: 240 LHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQ 299
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+++ +R M + PN FTYS LL+A L GEQ H V++ G ++++
Sbjct: 300 VREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNA 359
Query: 155 LINFYAGRGGV-EQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ Y + A VF + +V+ W S++AG+
Sbjct: 360 LVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGF----------------------- 396
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
A+K R + + LF EM+ A V L +H +
Sbjct: 397 --------AEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGH-- 445
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLG 333
+ + + + + NAL+ YA G+I +A+ V M R ++++T + ++G
Sbjct: 446 ---IIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHH 502
Query: 334 KEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF-----ASMNRTWG 388
AL + M + DG++ D +L L A G ++ G+++ + R
Sbjct: 503 GMALKVLIHMCN-----DGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHS 557
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
+S + H L S+ G + +A+ +++ +P+ W L+ G
Sbjct: 558 VSNSLVH------LYSKCGSIHDANRAFKDIS-EPDAFSWNGLISG 596
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 194/372 (52%), Gaps = 17/372 (4%)
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR- 238
V+ NS++ Y CG+ A VF+ M ++V SW+ +I A + L L G+M
Sbjct: 7 VIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSS 66
Query: 239 --RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
R RVE DL G+ IH I+ RN + +V + +LI MY
Sbjct: 67 EGRCRVEESTLVNVLSACTHLGSPDL--GKCIH-----GILLRNISELNVVVKTSLIDMY 119
Query: 297 ASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPD 356
G + +VF M +++ S+T MI A G GKEAL +F M+ +G + PD
Sbjct: 120 VKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEG-----LAPD 174
Query: 357 AITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
+ + V AC HAG V+EG + F SM I P ++HYGCMVDLL R G L EA+ LI
Sbjct: 175 DVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELI 234
Query: 417 ENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
++M +KPND +W +LL C++H N E+ + L L+ + + YLV L+N+YA A++
Sbjct: 235 KSMSIKPNDVIWRSLLSACKVHHNLEIGKIAAENLFM-LNQNNSGDYLV-LANMYAKAQK 292
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHV 536
W DV +R K+ E + + PG S I+ V+ FV+ D + IYE++ ++ Q
Sbjct: 293 WDDVAKIRTKLAERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKF 352
Query: 537 DSYEPDITGAFL 548
+ Y PD + L
Sbjct: 353 EGYIPDTSQVLL 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 7/202 (3%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECY 102
GL + L++ Y ++++A +F+ +D S W+ II +A W
Sbjct: 2 GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEM-WNECLML 60
Query: 103 RQMVSTEAE--PNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA 160
+S+E T +LSAC G G+ +HGI+L NV V+T+LI+ Y
Sbjct: 61 LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYV 120
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTT 216
G +E+ VF M +++ S+ +++G G A +VF EM + V +
Sbjct: 121 KSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVG 180
Query: 217 MIAGCAQKGRCKQALSLFGEMR 238
+ + C+ G ++ L F M+
Sbjct: 181 VFSACSHAGLVEEGLQCFKSMQ 202
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 220/454 (48%), Gaps = 16/454 (3%)
Query: 51 ITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEA 110
++ L+S Y + ++ A K+F +P + +WN II GY + +++ + +M
Sbjct: 232 LSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGV 291
Query: 111 EPNGFTYSFLLSACVRGGLLREG--EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
+ + +LS + LL +Q+H G ++ V + L++ Y+ +
Sbjct: 292 WGDFSAVANILS--ISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDS 349
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
+F + + N+++ Y +CG + A+ VF+ MP + ++SW +++ G Q
Sbjct: 350 CKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPS 409
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
+AL F M + V+ L+LG + + +Q +
Sbjct: 410 EALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQI-----I 464
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
+L+ Y CG++ +VF M + VSW +M+M +A G G EAL LF M
Sbjct: 465 CTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEM----- 519
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
G GVRP AIT +L AC H G V+EGR +F +M + I+P IEHY CMVDL +R G
Sbjct: 520 GYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGC 579
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLS 468
EA LIE MP + + +W ++L GC H N + + K++ +LD G +G + LS
Sbjct: 580 FGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKII-QLDP-GNSGAYIQLS 637
Query: 469 NIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
NI A ++ W+ VR+ M V+K PG SW+
Sbjct: 638 NILATSEDWEGSAEVRELMRNKNVQKIPGCSWMD 671
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 180/417 (43%), Gaps = 41/417 (9%)
Query: 49 NIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVST 108
N+I LS S LQ A LF+ + + VWN +I GY+R P S+ +++M
Sbjct: 96 NLIVSTLS---KSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLD 152
Query: 109 EAEP---NGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC--SNVFVETNLINFYAGRG 163
E + F S + AC L G+QVH V + G+ + + ++++NFY G
Sbjct: 153 PLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCG 212
Query: 164 GVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQ 223
++ A V + + S +++++GY + G AR+VFD V W ++I+G
Sbjct: 213 DLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVS 272
Query: 224 KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWY------VQQRIV 277
G +AL+LF +MRR V +++L + +H + +V
Sbjct: 273 NGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVV 332
Query: 278 ARNQ-------QQP-------------SVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
A Q P L N +I +Y +CG + DA +VF MP ++
Sbjct: 333 ASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTL 392
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SW S+++ + EAL F M +D V+ D + V+ AC ++ G
Sbjct: 393 ISWNSILVGLTQNACPSEALDTFSMM----NKLD-VKMDKFSFASVISACAIKSSLELGE 447
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++F T G+ +VD + G ++ + + M +K ++ W +L G
Sbjct: 448 QLFGKA-ITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGM-IKTDEVSWNTMLMG 502
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 105/193 (54%), Gaps = 4/193 (2%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
++ +++ Y +++ A ++F+++ N + WN I+ G ++ P ++++ + M +
Sbjct: 363 LLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLD 422
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQAR 169
+ + F+++ ++SAC L GEQ+ G + G S+ + T+L++FY G VE R
Sbjct: 423 VKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGR 482
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKG 225
VFDGM + VSWN++L GY + G A +F+EM V +++T +++ C G
Sbjct: 483 KVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCG 542
Query: 226 RCKQALSLFGEMR 238
++ LF M+
Sbjct: 543 LVEEGRDLFRTMK 555
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 109/282 (38%), Gaps = 65/282 (23%)
Query: 130 LREGEQVHGIVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+RE Q+H +L G + + TN L+ Y+ RG + A +FD M Q + SWN+++
Sbjct: 10 IREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIE 69
Query: 189 GYVS-------------------------------CGDFDGARRVFDEMPIRNVVSWTTM 217
+++ GD A+ +F+ MP++N + W +M
Sbjct: 70 AHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSM 129
Query: 218 IAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGD---LKLGRWIHWYV-- 272
I G ++ G + +L LF EM +E D L G+ +H V
Sbjct: 130 IHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFI 189
Query: 273 ---------------------------QQRIVARNQQQPSVRLNNALIHMYASCGVIGDA 305
R+V ++ L +AL+ YA+ G + DA
Sbjct: 190 DGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSL-SALVSGYANAGRMSDA 248
Query: 306 YQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDG 347
+VF +V W S+I + G EAL LF M +G
Sbjct: 249 RKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNG 290
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+ + + GL I T L+ FY ++ K+F + WN ++ GYA +
Sbjct: 448 QLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNG 507
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE- 152
+++ + +M + P+ T++ +LSAC GL+ EG + + Y N +E
Sbjct: 508 YGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFR-TMKHDYDINPGIEH 566
Query: 153 -TNLINFYAGRGGVEQARHVFDGMG-QRSVVSWNSILAGYVSCGD 195
+ +++ +A G +A ++ + M Q W S+L G VS G+
Sbjct: 567 YSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGN 611
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 231/490 (47%), Gaps = 48/490 (9%)
Query: 19 VFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTID 75
V ++LQ+C ++N+ ++ + + G + LL Y+ +++ A L + ++
Sbjct: 218 VVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGME 277
Query: 76 NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
W +I GY + ++ R M +PN + + LLSAC L+ G+
Sbjct: 278 EKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKC 337
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
+H + + S V +ET LI+ YA C +
Sbjct: 338 LHAWAIRQNIESEVVMETALIDMYA-------------------------------KCNE 366
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
+ + +VF + + W +++G + A+ LF EM V+
Sbjct: 367 GNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPA 426
Query: 256 XXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP-- 313
DLK +H Y+ + + S+ L+ +Y+ CG +G A+Q+F +P
Sbjct: 427 YAILADLKQAMNMHCYLVKLGFLCKLEVASM-----LVDIYSKCGTLGYAHQIFDMIPLK 481
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+ + WT++I A+ K G G+ A+ LF MV G +P+ +T VL AC HAG V
Sbjct: 482 DKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGE-----KPNEVTFTSVLHACSHAGLV 536
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
D+G +F M + + + P ++HY C+VDLL RAG L++A+ LI MP+ N A+WGALLG
Sbjct: 537 DQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLG 596
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVK 493
C IH+N EL + + EL+ + Y VLL+ +YA RW+D VR + E+G++
Sbjct: 597 ACVIHENVELGEIA-ARWTFELEPENTGNY-VLLAKLYAAVGRWRDAERVRNMVNEVGLR 654
Query: 494 KPPGQSWIQI 503
K P S +++
Sbjct: 655 KTPANSLVEL 664
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 184/425 (43%), Gaps = 55/425 (12%)
Query: 18 HVFTLLQ---SCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTI 74
H +LL+ + N++ ++H+ ++ GL + + +KL + Y +A +LF +
Sbjct: 14 HFESLLRKYSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKL 73
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMV-STEAEPNGFTYSFLLSACVRGGLLREG 133
+ WN ++R Y + P ++ + +M+ S A P+ FTY ++ AC + G
Sbjct: 74 PKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMG 133
Query: 134 EQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSC 193
VHG G+ N FV+ +L+ Y G E AR VF+ M +R+VVSWN+++ G
Sbjct: 134 VGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRN 193
Query: 194 GDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXX 253
+ A RV+ M V + Q + + L E+R +E
Sbjct: 194 NCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEK--------- 244
Query: 254 XXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
G W +V + NAL+ MY CG + +A + M
Sbjct: 245 -----------GYW----------------GNVVVRNALLDMYVKCGEMEEARLLLNGME 277
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
++ V+WT++I + G + AL L ++M ++GV+P+ +++ +L AC +
Sbjct: 278 EKDVVTWTTLINGYVVNGDARSALMLCRSM-----QLEGVKPNLVSVASLLSACGDLVSL 332
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCM----VDLLSRAGFLDEAHGLIENMPLKPNDALWG 429
G+ + A W I IE M +D+ ++ + ++ + K A W
Sbjct: 333 KHGKCLHA-----WAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTS-KKRTAPWN 386
Query: 430 ALLGG 434
A+L G
Sbjct: 387 AVLSG 391
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 31/326 (9%)
Query: 190 YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMR---RARVEXXX 246
Y C A ++FD++P RN+ SW TM+ Q GR AL++F EM RA +
Sbjct: 57 YAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFT 116
Query: 247 XXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAY 306
D+ +G +H A+ + + N+L+ MY + G A
Sbjct: 117 YPIVIKACSELLFVDMGVG--VHGQT-----AKCGFDLNSFVQNSLLAMYMNVGEKEAAR 169
Query: 307 QVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCA 366
VF M +R+ VSW ++I + ++AL ++ MV +G GV D T++ VL A
Sbjct: 170 LVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGV-----DCATVVSVLQA 224
Query: 367 CCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDA 426
C V+ GR + A + G + ++D+ + G ++EA L+ M K +
Sbjct: 225 CGVLKNVELGREVRA-LTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEK-DVV 282
Query: 427 LWGALLGGCQIHKNSELASV---------VEPKLVAELDTDGAAGYLVLLSN---IYAFA 474
W L+ G ++ ++ A + V+P LV+ A G LV L + ++A+A
Sbjct: 283 TWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWA 342
Query: 475 KRW--QDVIAVRQKMIEMGVKKPPGQ 498
R + + + +I+M K G
Sbjct: 343 IRQNIESEVVMETALIDMYAKCNEGN 368
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 232/481 (48%), Gaps = 46/481 (9%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L SC N IQIH+ ++ +G + + L+ FY + A+K+F +
Sbjct: 53 LSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQ 112
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV-RGGLLREGEQVHG 138
W +I G++ + ++ +++M+ T+ PN FT + +++ACV + G+L +H
Sbjct: 113 VSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHV 172
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ +G+ ++ FV ++L++ YA +W G D
Sbjct: 173 HVIKQGFDTSSFVISSLVDCYA---------------------NW----------GQIDD 201
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A +F+E ++ V + TMI+G Q + AL LF EMR +
Sbjct: 202 AVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSS 261
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L GR +H V + RN V + + LI MY+ G I +A V + +++TV
Sbjct: 262 LAMLLQGRQVHSLVIKMGSERN-----VYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTV 316
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
WTSMIM +A+ G G EAL LF +++ + PD + VL AC HAGF+D+G
Sbjct: 317 LWTSMIMGYAQCGRGLEALELFDYLLTKKELI----PDHVCFTAVLTACNHAGFIDKGEE 372
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F M +G+SP I+ Y C++DL +R G L +A L+E MP PN +W + L C+I+
Sbjct: 373 YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIY 432
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
+ EL +L+ +++ AA YL L++IY W + VR M + +KPPG
Sbjct: 433 GDVELGREAAIQLI-KMEPCNAAPYLT-LAHIYTTKGLWNEASEVRSLMQQRVKRKPPGW 490
Query: 499 S 499
S
Sbjct: 491 S 491
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 55/338 (16%)
Query: 15 IQQHVFTLLQSCNN-------IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
I+ + FTL N +++ +H V+ G + +I+ L+ Y Q+ A
Sbjct: 143 IRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDA 202
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
LF+ T ++N +I GY ++ +++ + +M P T S +LSAC
Sbjct: 203 VLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSL 262
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+L +G QVH +V+ G NV+V + LI+ Y+ G +++A+ V D +++ V W S++
Sbjct: 263 AMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMI 322
Query: 188 AGYVSCGDFDGARRVFDEM-----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
GY CG A +FD + I + V +T ++ C G + F +M
Sbjct: 323 MGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM----- 377
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ P + + LI +YA G +
Sbjct: 378 ----------------------------------ITNYGLSPDIDIYACLIDLYARNGNL 403
Query: 303 GDAYQVFTKMP-QRSTVSWTSMIMAFAKQG---LGKEA 336
A + +MP + + W+S + A G LG+EA
Sbjct: 404 RKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREA 441
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 52/357 (14%)
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
N IR +++S + +++E +M +P + LS+C + G Q+H ++
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIR 74
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
GY N+F+ + L++FYA + A +F M Q VSW S++AG+ + A +
Sbjct: 75 SGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLL 134
Query: 203 FDEM---PIR-NVVSWTTMIAGC-AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
F EM IR N + T++I C Q G + +L
Sbjct: 135 FKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLH----------------------- 171
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
+H V + S + ++L+ YA+ G I DA +F + ++ T
Sbjct: 172 ----------VH-------VIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDT 214
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V + +MI + + ++AL LF M + P TL +L AC + +GR
Sbjct: 215 VIYNTMISGYCQNLYSEDALKLFVEMRE-----KNMSPTDHTLSSILSACSSLAMLLQGR 269
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ S+ G + ++D+ S+ G +DEA +++ K N LW +++ G
Sbjct: 270 QVH-SLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS-KKNTVLWTSMIMG 324
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 143/481 (29%), Positives = 232/481 (48%), Gaps = 46/481 (9%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L SC N IQIH+ ++ +G + + L+ FY + A+K+F +
Sbjct: 53 LSSCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQ 112
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV-RGGLLREGEQVHG 138
W +I G++ + ++ +++M+ T+ PN FT + +++ACV + G+L +H
Sbjct: 113 VSWTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHV 172
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ +G+ ++ FV ++L++ YA +W G D
Sbjct: 173 HVIKQGFDTSSFVISSLVDCYA---------------------NW----------GQIDD 201
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A +F+E ++ V + TMI+G Q + AL LF EMR +
Sbjct: 202 AVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSS 261
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L GR +H V + RN V + + LI MY+ G I +A V + +++TV
Sbjct: 262 LAMLLQGRQVHSLVIKMGSERN-----VYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTV 316
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
WTSMIM +A+ G G EAL LF +++ + PD + VL AC HAGF+D+G
Sbjct: 317 LWTSMIMGYAQCGRGLEALELFDYLLTKKELI----PDHVCFTAVLTACNHAGFIDKGEE 372
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F M +G+SP I+ Y C++DL +R G L +A L+E MP PN +W + L C+I+
Sbjct: 373 YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIY 432
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
+ EL +L+ +++ AA YL L++IY W + VR M + +KPPG
Sbjct: 433 GDVELGREAAIQLI-KMEPCNAAPYLT-LAHIYTTKGLWNEASEVRSLMQQRVKRKPPGW 490
Query: 499 S 499
S
Sbjct: 491 S 491
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 140/338 (41%), Gaps = 55/338 (16%)
Query: 15 IQQHVFTLLQSCNN-------IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
I+ + FTL N +++ +H V+ G + +I+ L+ Y Q+ A
Sbjct: 143 IRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDA 202
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
LF+ T ++N +I GY ++ +++ + +M P T S +LSAC
Sbjct: 203 VLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSL 262
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+L +G QVH +V+ G NV+V + LI+ Y+ G +++A+ V D +++ V W S++
Sbjct: 263 AMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMI 322
Query: 188 AGYVSCGDFDGARRVFDEM-----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
GY CG A +FD + I + V +T ++ C G + F +M
Sbjct: 323 MGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM----- 377
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
+ P + + LI +YA G +
Sbjct: 378 ----------------------------------ITNYGLSPDIDIYACLIDLYARNGNL 403
Query: 303 GDAYQVFTKMP-QRSTVSWTSMIMAFAKQG---LGKEA 336
A + +MP + + W+S + A G LG+EA
Sbjct: 404 RKARDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREA 441
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 52/357 (14%)
Query: 83 NHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLV 142
N IR +++S + +++E +M +P + LS+C + G Q+H ++
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIR 74
Query: 143 KGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRV 202
GY N+F+ + L++FYA + A +F M Q VSW S++AG+ + A +
Sbjct: 75 SGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLL 134
Query: 203 FDEM---PIR-NVVSWTTMIAGC-AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
F EM IR N + T++I C Q G + +L
Sbjct: 135 FKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLH----------------------- 171
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
+H V + S + ++L+ YA+ G I DA +F + ++ T
Sbjct: 172 ----------VH-------VIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDT 214
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
V + +MI + + ++AL LF M + P TL +L AC + +GR
Sbjct: 215 VIYNTMISGYCQNLYSEDALKLFVEMRE-----KNMSPTDHTLSSILSACSSLAMLLQGR 269
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGG 434
++ S+ G + ++D+ S+ G +DEA +++ K N LW +++ G
Sbjct: 270 QVH-SLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS-KKNTVLWTSMIMG 324
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 213 bits (541), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 230/494 (46%), Gaps = 51/494 (10%)
Query: 12 RRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLF 71
R + H FT L + Q+HSQ++ G T T LL Y L + K+F
Sbjct: 57 RIDLDSHTFTPLLRPSPTSLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVF 116
Query: 72 STIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLR 131
+ + WN ++ + R P +++ R+M E + FT +L C L
Sbjct: 117 DEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALE 176
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM-GQRSVVSWNSILAGY 190
G QVHG+V+ G V + T LI+FY+ G V A +VF G+ G + + NS+++G
Sbjct: 177 FGRQVHGLVVAMGR-DLVVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGC 235
Query: 191 VSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXX 250
+ G + A +V + N V+ T+++ C+++
Sbjct: 236 IKNGRYREAFKVMS-LVKPNAVALTSVLVCCSEES------------------------- 269
Query: 251 XXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFT 310
DL G+ +H + R +L N L+ MYA CG I A+ VF
Sbjct: 270 ----------DLLTGKQVHC-----VAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFD 314
Query: 311 KMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHA 370
+ Q+ +SWT MI + + G G EA+ LF M+ DG+ V P+++T + VL AC H+
Sbjct: 315 GIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEV---LPNSVTFLSVLSACGHS 371
Query: 371 GFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM---PLKPNDAL 427
G V+EG++ F M +GI P EHY C +D+L RAG ++E +NM P +
Sbjct: 372 GLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEEVWSAYQNMIDQGTSPTAGV 431
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
W +LL C + ++ E L+ +L+ + A+ +VL SN YA RW V +R M
Sbjct: 432 WISLLNACSLGQDFERGEFAAKSLL-QLEPNKASN-IVLASNFYAAIGRWDCVGELRSMM 489
Query: 488 IEMGVKKPPGQSWI 501
E G+ K G SWI
Sbjct: 490 REKGLVKEAGNSWI 503
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 26/252 (10%)
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
R + ++I ++G A +LF +RR R++ LG+ +
Sbjct: 25 RPISELNSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRPSPT----SLGKQL 80
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H +++ +V AL+ MY+ G + + +VF +M R V+W +++ F
Sbjct: 81 H----SQMIKTGSDSGTVP-KTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFL 135
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRI---FASMNR 385
+ G EA+ + + M G + V TL VL C ++ GR++ +M R
Sbjct: 136 RCGKPDEAIRVLREM-----GRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGR 190
Query: 386 TWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGC----QIHKNS 441
+ ++D S G + A + + +D + +L+ GC + +
Sbjct: 191 DLVVLST-----ALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAF 245
Query: 442 ELASVVEPKLVA 453
++ S+V+P VA
Sbjct: 246 KVMSLVKPNAVA 257
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 247/523 (47%), Gaps = 30/523 (5%)
Query: 21 TLLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
++L++C + + + +H + + + + L+ Y +L+ A +LF +
Sbjct: 198 SVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPAR 257
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV-----RGGL--- 129
WN +I YA ++ + M E N ++ + C+ +G L
Sbjct: 258 DDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLF 317
Query: 130 --LREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
+R Q+ + +V G + + + V VFD + N+++
Sbjct: 318 SQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVK-------NTLI 370
Query: 188 AGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXX 247
Y C D + A +F ++ + +++W M++G A R ++ L EM R VE
Sbjct: 371 TMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYV 430
Query: 248 XXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQ 307
+L+ G+ H Y+ +R Q + + L N+L+ MY+ G + +A +
Sbjct: 431 TIASILPLCARIANLQHGKEFHCYMVKR---EEQFKGYLLLWNSLVEMYSRSGKVLEARK 487
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCAC 367
VF + ++ V++TSMIM + G G+ AL LF M ++PD +T++ VL AC
Sbjct: 488 VFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLN-----IKPDHVTMVAVLIAC 542
Query: 368 CHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDAL 427
H+G V +G+ +F M +GI PR+EHY CMVDL RAG LD+A +I M KP A+
Sbjct: 543 SHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAI 602
Query: 428 WGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKM 487
W L+G C+IH N+ + KL+ E+ D +GY +L++N+YA A R R M
Sbjct: 603 WATLIGACKIHGNTVIGEWAAGKLL-EMKPD-HSGYYLLIANMYAAANRLDKEAEARTYM 660
Query: 488 IEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEI 530
+ G K+ PG +W+ + + F+AGD ++ S I ++ +
Sbjct: 661 RDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRL 703
Score = 166 bits (421), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 216/457 (47%), Gaps = 28/457 (6%)
Query: 9 ASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQ 65
AS I Q + LL C N+++L Q IH+ ++ G+ Q +++KL++FY + D L
Sbjct: 85 ASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLA 144
Query: 66 HAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACV 125
A + ++ WN +I Y ++ ++ YR+M+S P+ +TY +L AC
Sbjct: 145 DAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKAC- 203
Query: 126 RGGLL--REGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSW 183
G LL G VH + ++FV L+ Y G +E AR +FD M R VSW
Sbjct: 204 -GELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSW 262
Query: 184 NSILAGYVSCGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
N++++ Y S G +D A R+F M RN++ W T+ GC G K AL LF +M R
Sbjct: 263 NTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQM-R 321
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
A ++ G +KLG+ IH + R + N LI MY+ C
Sbjct: 322 AVIQLDSVAMVVGLNACSHIGAVKLGKEIHGH-----AVRTCFDVFDNVKNTLITMYSRC 376
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ AY +F K+ ++ ++W +M+ FA +E L + M+ +GV P+ +T
Sbjct: 377 RDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLR-----EGVEPNYVT 431
Query: 360 LIVVLCACCHAGFVDEGRRIFASM-NRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIEN 418
+ +L C + G+ M R + + +V++ SR+G + EA + ++
Sbjct: 432 IASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDS 491
Query: 419 MPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAEL 455
+ K ++ + +++ G + + E A KL AE+
Sbjct: 492 LSRK-DEVTYTSMIMGYGVSGDGETAL----KLFAEM 523
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 216/484 (44%), Gaps = 47/484 (9%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
L+ C I N+ +H + + +++T L+S YI + +A LF+ +
Sbjct: 406 LVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKD 465
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
VWN +I G+ + P ++E + ++ + P+ T L SAC L G +HG
Sbjct: 466 IVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHG 525
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
+ G+ S++ V+ L++ YA CG
Sbjct: 526 GIEKSGFESDIHVKVALMDMYA-------------------------------KCGSLCS 554
Query: 199 ARRVFDEMP-IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
R+F +++ VSW MIAG G +A+S F M+ V
Sbjct: 555 VERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVS 614
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L+ H + R + N+LI MYA CG + + + F +M + T
Sbjct: 615 YLSILREAMAFH-----TCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDT 669
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
+SW +M+ A+A G G+ A+ LF M VR D+++ I VL AC H+G + EG
Sbjct: 670 ISWNAMLSAYAMHGQGELAVALFSVMQESN-----VRVDSVSYISVLSACRHSGLIQEGW 724
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQI 437
IFASM + P +EHY CMVDLL AG DE L+ M +P+ +WGALL C+I
Sbjct: 725 DIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKI 784
Query: 438 HKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPG 497
H N L V L+ +L+ + V+LS+IYA RW D R + G+KK PG
Sbjct: 785 HSNVTLGEVAVHHLL-KLEPRNPVHH-VVLSDIYAQCGRWNDARRTRSHINNHGLKKIPG 842
Query: 498 QSWI 501
SW+
Sbjct: 843 YSWV 846
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/492 (22%), Positives = 188/492 (38%), Gaps = 97/492 (19%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIA 60
M I+ F H+F + Q NN L I+S +N L Q
Sbjct: 6 MKIKLFTSKHSNSLHTHHIFPIQQQNNNNHYLKLINSCKYINPLLQ-------------- 51
Query: 61 SDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFL 120
H F I NPS ++N I+ Y++ H K++ Y ++ +P+ FT++F+
Sbjct: 52 ------IHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFV 105
Query: 121 LSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSV 180
L AC EG ++ ++ G +V++ T+LI+ + G ++ AR+VFD M +
Sbjct: 106 LKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDG 165
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRA 240
V WN+ MI+G +Q +AL +F M+
Sbjct: 166 VCWNA-------------------------------MISGLSQSLNPCEALEMFWRMQME 194
Query: 241 RVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCG 300
E GD+ + IH YV +R + ++N+LI MY CG
Sbjct: 195 GFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICG-------VVSNSLIDMYCKCG 247
Query: 301 VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD--------- 351
+ A +VF +M R VSW +M+ + K G E L L M ++
Sbjct: 248 DVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALL 307
Query: 352 ---------------------GVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGIS 390
G+ D + ++C G + + R +F S+
Sbjct: 308 VVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLE-----G 362
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGCQIHKNSELASVV 447
+ + + L G+ E + + M LKP+ A+ L+ GC N L ++
Sbjct: 363 RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIM 422
Query: 448 EPKLV-AELDTD 458
+ A++++D
Sbjct: 423 HCYAIKADMESD 434
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 48/426 (11%)
Query: 22 LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L++C + + + I+ +V NGL I T L+ + L +A +F +
Sbjct: 105 VLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKD 164
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN +I G ++S P +++E + +M E + + L A R G + + +HG
Sbjct: 165 GVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHG 224
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ + C VVS NS++ Y CGD
Sbjct: 225 YVVRRSICG--------------------------------VVS-NSLIDMYCKCGDVHS 251
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXX 258
A+RVFD M +R+ VSW TM+AG + G + L L +MRR V+
Sbjct: 252 AQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAE 311
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
DL+ G+ I+ Y Q + + + + ++ MYA CG + A ++F + R V
Sbjct: 312 MRDLEKGKEIYNYALQMGLMSD-----IVVATPIVCMYAKCGELKKARELFLSLEGRDLV 366
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
+W++ + A + G +E L +F+ M +G++PD L +++ C + G +
Sbjct: 367 AWSAFLSALVETGYPREVLSIFQVM-----QYEGLKPDKAILSILVSGCTEISNIGLG-K 420
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
I + I +V + R A L M +K + +W L+ G +
Sbjct: 421 IMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK-DIVVWNTLINGFTKY 479
Query: 439 KNSELA 444
+ LA
Sbjct: 480 GDPHLA 485
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/412 (19%), Positives = 162/412 (39%), Gaps = 44/412 (10%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
+I++ + GL + T ++ Y +L+ A +LF +++ W+ + +
Sbjct: 320 EIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETG 379
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
P + + ++ M +P+ S L+S C + G+ +H + S++ + T
Sbjct: 380 YPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVT 439
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVS 213
L++ Y + F A +F+ M I+++V
Sbjct: 440 TLVSMY-------------------------------IRFELFTYAMTLFNRMQIKDIVV 468
Query: 214 WTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQ 273
W T+I G + G AL +F ++ + + DL LG +H ++
Sbjct: 469 WNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIE 528
Query: 274 QRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGL 332
++ + + + AL+ MYA CG + ++F + VSW MI + G
Sbjct: 529 -----KSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGY 583
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPR 392
EA+ F+ M ++ VRP+ +T + +L A + + E + R +S
Sbjct: 584 SNEAISTFRRM-----KLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCT 638
Query: 393 IEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELA 444
+ ++D+ ++ G L + M K + W A+L +H ELA
Sbjct: 639 LIG-NSLIDMYAKCGQLRYSEKCFHEMENKDTIS-WNAMLSAYAMHGQGELA 688
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 238/507 (46%), Gaps = 50/507 (9%)
Query: 1 MLIERFVPASGR-RSIQQHVFTLLQSCNNIQNLIQIHSQVVLNGL-SQKTNIITKLLSFY 58
ML+ F P+S SI + L S + + +H V+ GL + ++ L+ Y
Sbjct: 102 MLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMY 161
Query: 59 IASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYS 118
Q+ A K+F +D + W I+ GY + + ++V+ + +M + +
Sbjct: 162 AQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFV 221
Query: 119 FLLSACVRGGLLRE---GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
L+S C++ LRE VH +VL G C H D +
Sbjct: 222 NLVSGCIQ---LREQLLASSVHSLVLKCG-C-----------------------HEEDSI 254
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
N +L Y CG+ AR +FD + ++V+SWT+MIAG A R K+AL LF
Sbjct: 255 K-------NLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFR 307
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
M ++ G L +G I Y + N + +++ +L+HM
Sbjct: 308 RMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFE-----NGFETDLQVQTSLVHM 362
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y+ CG I A +VF ++ + W+SMI ++ G+G EA+ LF+ M + + ++P
Sbjct: 363 YSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTT----AERIKP 418
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
DAI +L AC H+G +++G + F SM +GI+P EHY C+VDLL+R G LD A
Sbjct: 419 DAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDT 478
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
IE MP LL C+IH N EL +V KL+ ++ ++ Y V ++N+Y
Sbjct: 479 IEAMPTDVQAEALSPLLSACRIHGNIELGELVAAKLL-DVSPKSSSSY-VGVANLYNSVG 536
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
+W++ +R + G+ K G S +Q
Sbjct: 537 KWKEANTMRNMIDGKGMVKECGWSQVQ 563
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 211/472 (44%), Gaps = 67/472 (14%)
Query: 14 SIQQHVFT---LLQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
S+ + FT L +SC N+ ++ +H V G T + T L+ Y ++ A
Sbjct: 5 SVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESA 64
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
K+F + S WN +I Y K++ ++M+ +P+ T+ +LS
Sbjct: 65 RKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSN 124
Query: 128 ----GLLREGEQVHGIVLVKGY-CSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
L +G +H V+ G C V ++ +L+ YA G +++AR VFD M ++++VS
Sbjct: 125 LNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVS 184
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMR 238
W +I+ GYV G A ++F+EM +N+ + + +++GC Q ++ L
Sbjct: 185 WTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQ---LREQL------- 234
Query: 239 RARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYAS 298
L +H V + ++ S++ N L+ MYA
Sbjct: 235 -------------------------LASSVHSLVLK---CGCHEEDSIK--NLLLTMYAR 264
Query: 299 CGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAI 358
CG + A +F + ++S +SWTSMI +A KEAL LF+ MV + ++P+
Sbjct: 265 CGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMV-----MTEIKPNRA 319
Query: 359 TLIVVLCACCHAGFVDEGRRI--FASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLI 416
TL VL AC G + G I +A N G ++ +V + S+ G +++A +
Sbjct: 320 TLATVLSACADLGSLCIGEEIEQYAFEN---GFETDLQVQTSLVHMYSKCGNINKAREVF 376
Query: 417 ENMPLKPNDALWGALLGGCQIH-KNSELASVVEPKLVAELDTDGAAGYLVLL 467
E + K + LW +++ IH +E S+ E AE A Y LL
Sbjct: 377 ERVENK-DLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLL 427
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 194/417 (46%), Gaps = 62/417 (14%)
Query: 118 SFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQ 177
S LS C G Q H + + G+ +NV+V ++LI+ Y+
Sbjct: 112 SHALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYS----------------- 154
Query: 178 RSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
CG A RVFDEM +RNVVSWT +IAG AQ+ R L LF M
Sbjct: 155 --------------RCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRM 200
Query: 238 RRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYA 297
R ++ G L GR +H + Q + + NALI MY+
Sbjct: 201 RGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQM-----GFHCYLHVENALIAMYS 255
Query: 298 SCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDA 357
CGVI DA +F M + V+W SMI+ G + GV PDA
Sbjct: 256 KCGVIVDALYIFENMVSKDVVTWNSMIV---------------------GMRIMGVNPDA 294
Query: 358 ITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIE 417
+T + +L +C H G V EG+ F+SM G+ P ++HY C+VDLL RAG L EA I+
Sbjct: 295 VTFLGILSSCRHGGLVKEGQVYFSSM-VDHGLQPELDHYSCIVDLLGRAGLLLEALDFIQ 353
Query: 418 NMPLKPNDALWGALLGGCQIHKNSELA-SVVEPKLVAELDTDGAAGYLVLLSNIYAFAKR 476
NMP+ PN +WG+LL ++H N + E +L E G + L+ L+N+YA
Sbjct: 354 NMPVCPNAVIWGSLLSSSRLHGNVWIGIRAAESRLSLE---PGCSSTLLQLANLYASVGW 410
Query: 477 WQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQ 533
W V VRQ M + G+K PG SWI++ VH F + D ++ I I+ ++
Sbjct: 411 WNQVARVRQLMKDKGLKPNPGCSWIEVKNKVHRFESQDKSNSRMNGILLIMDSLVDH 467
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 12/220 (5%)
Query: 18 HVFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
H +L S + IQ H + G + + L+S Y L A+++F +
Sbjct: 113 HALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVR 172
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ W II G+A+ +E +R+M E +PN FTY+ LLSAC+ G L G VH
Sbjct: 173 NVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVH 232
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
++ G+ + VE LI Y+ G + A ++F+ M + VV+WNS++ G
Sbjct: 233 CQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVGM------- 285
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM 237
R+ P + V++ +++ C G K+ F M
Sbjct: 286 ---RIMGVNP--DAVTFLGILSSCRHGGLVKEGQVYFSSM 320
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 223/473 (47%), Gaps = 44/473 (9%)
Query: 27 NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHII 86
N ++ + IH ++ G+ T L+ Y D + A KLF + N V+N ++
Sbjct: 254 NYLRRGMSIHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMM 312
Query: 87 RGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
GY + P ++V +R+MV T A N + L+SA + +R +HG VL +
Sbjct: 313 TGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHI 372
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
++V + +I+ YA G +V D AR VF+ M
Sbjct: 373 THVEIANQIIHAYAKFG------YVVD-------------------------AREVFNRM 401
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGR 266
R++VSWT+MI G G +A+ LF ++R + G L +
Sbjct: 402 RTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIK 461
Query: 267 WIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMA 326
+H + + ++ + +NN+LI YA CG + A +F +M +R SW +MI A
Sbjct: 462 EVHCFSYRFFHGKD-----LSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGA 516
Query: 327 FAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRT 386
+A G E L LF M AG V PD +T +L AC H+G V+EG +IF M +
Sbjct: 517 YAMHGNYTEVLELFDHM---KAG--KVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKE 571
Query: 387 WGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASV 446
+ I P HY C+VDLLSRAG L EA+ L+++MP + A ALL C+++ ++E+
Sbjct: 572 YAIVPNEVHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEA 631
Query: 447 VEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQS 499
+ K + +L+ + Y L+SNI A RW +V +R K PG S
Sbjct: 632 I-GKQILKLEPHSSGPY-ALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYS 682
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 47/392 (11%)
Query: 52 TKLLSFYIASDQLQHAHKLFSTIDNPSTT---VWNHIIRGYARSHTPWKSVECYRQMVST 108
T LL Y + A +F+ +D T WN +I GY R+ ++ E +R+M+
Sbjct: 175 TTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCR 234
Query: 109 EAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQA 168
P+ T + + CV LR G +HG ++ G ++ T L++ Y + + +A
Sbjct: 235 NVLPDLLTLANAIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYC-KIDITKA 293
Query: 169 RHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCK 228
R +F+ +G + V +N ++ GY+ G A VF EM N + +
Sbjct: 294 RKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALF---------- 343
Query: 229 QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRL 288
L+L + + R D++L R IH Y V R+ V +
Sbjct: 344 --LNLISALSKLR-------------------DIRLVRSIHGY-----VLRHMHITHVEI 377
Query: 289 NNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGA 348
N +IH YA G + DA +VF +M R VSWTSMI + G +A+ LF+ + +
Sbjct: 378 ANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHL 437
Query: 349 GVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGF 408
+D V TLI +L A G + + + R + + ++ ++ G
Sbjct: 438 SIDSV-----TLIGLLQALSQLGCLSFIKEVHCFSYRFFH-GKDLSVNNSLITTYAKCGK 491
Query: 409 LDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
L A + + M + + W A++G +H N
Sbjct: 492 LCTARYIFQQMTERCLTS-WNAMIGAYAMHGN 522
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 58/344 (16%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
L++C ++ L I +H + + + + L+ Y +++ AHK+F I N
Sbjct: 39 LKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDI 98
Query: 80 TVWNHIIRGYARS--HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
+ +I Y S + + M PN T L+ A + LREG+ VH
Sbjct: 99 FAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVH 158
Query: 138 GIVLVK--GYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVV---SWNSILAGYVS 192
G + + G +VF ET L++ Y GGV A VF M R + SWN+++AGY+
Sbjct: 159 GYAVRREIGLGDDVF-ETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLR 217
Query: 193 CGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
G A +F M RNV ++ I C + ++ +S+ G M
Sbjct: 218 NGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHGYM----------- 266
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV-IGDAYQ 307
I V+ +VA + AL+ +Y C + I A +
Sbjct: 267 -------------------ITMGVELDLVA----------STALVDLY--CKIDITKARK 295
Query: 308 VFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVD 351
+F ++ + V + M+ + + GL EA+ +F+ MV A +
Sbjct: 296 LFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTN 339
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 142/379 (37%), Gaps = 60/379 (15%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
T +F L C+ G L G VH + + S+ FV ++LI Y+ G ++ A
Sbjct: 34 TITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAH------ 87
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKG-RCKQ-ALSL 233
+VFDE+ +++ ++T+MI G C A +
Sbjct: 88 -------------------------KVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNT 122
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
M++ + L+ G+ +H Y +R + L+
Sbjct: 123 AFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDV----FETTLL 178
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTV---SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGV 350
MY CG +G A VF KM R SW ++I + + G EA LF+ M+
Sbjct: 179 DMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMM-----C 233
Query: 351 DGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLD 410
V PD +TL + C ++ G I M T G+ + +VDL + +
Sbjct: 234 RNVLPDLLTLANAIFCCVELNYLRRGMSIHGYM-ITMGVELDLVASTALVDLYCKID-IT 291
Query: 411 EAHGLIENMPLKP----NDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVL 466
+A L E + K N + G L G + E +V E+ A+ + L
Sbjct: 292 KARKLFERLGNKDAVVYNVMMTGYLENGLPV----EAVNVFR-----EMVKTNASTNVAL 342
Query: 467 LSNIYAFAKRWQDVIAVRQ 485
N+ + + +D+ VR
Sbjct: 343 FLNLISALSKLRDIRLVRS 361
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 232/512 (45%), Gaps = 57/512 (11%)
Query: 15 IQQHVFT---LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
+ +VFT L+ +C + L Q +H V+ NG+ + + T LL+ Y+ + A
Sbjct: 231 LDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDAR 290
Query: 69 KLFSTID------NPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLS 122
+F W +I GY + P ++E + PN T + LLS
Sbjct: 291 SVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLS 350
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC + + G+ +H +V+ G D R
Sbjct: 351 ACAQLENIVMGKLLHVLVVKYG---------------------------LDDTSLR---- 379
Query: 183 WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
NS++ Y CG A VF ++VVSW ++I+G AQ G +AL LF MR
Sbjct: 380 -NSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESF 438
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
G ++G +H + + + + S+ + AL++ YA CG
Sbjct: 439 LPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSS----SIYVGTALLNFYAKCGDA 494
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
A VF M +++ V+W +MI QG G +L LF+ M+ + + P+ +
Sbjct: 495 TSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEE-----LVPNEVVFTT 549
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
+L AC H+G V+EG IF M + P ++HY CMVDLL+RAG L EA I+ MP++
Sbjct: 550 LLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQ 609
Query: 423 PNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIA 482
P ++GA L GC +H N + V +++ EL D A Y VL+SN+YA RW V
Sbjct: 610 PGVGVFGAFLHGCGLHSNFDFGEVAIRRML-ELHPDQAC-YYVLISNLYASDGRWGMVKE 667
Query: 483 VRQKMIEMGVKKPPGQSWIQ--INGVVHDFVA 512
VR+ + + G+ K PG S ++ +N H VA
Sbjct: 668 VREMIKQRGLNKVPGVSLVEMDVNNTTHVNVA 699
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 189/423 (44%), Gaps = 53/423 (12%)
Query: 22 LLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
LL++ + +++++ ++H + L + + ++T L+ Y +L+ A K+F I + S
Sbjct: 141 LLKTASQLRDIVLTTKLHCNI-LKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRS 199
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
W +I Y ++ + + + +M + N FT L++AC + G L +G+ VHG
Sbjct: 200 VVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHG 259
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDG 198
V+ G N ++ T+L+N Y V CGD
Sbjct: 260 YVIKNGIEINSYLATSLLNMY-------------------------------VKCGDIGD 288
Query: 199 ARRVFDEMPIR------NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXX 252
AR VFDE + ++V WT MI G Q+G + AL LF + + R+
Sbjct: 289 ARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASL 348
Query: 253 XXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKM 312
++ +G+ +H V V S+R N+L+ MYA CG+I DA+ VF
Sbjct: 349 LSACAQLENIVMGKLLHVLV----VKYGLDDTSLR--NSLVDMYAKCGLIPDAHYVFATT 402
Query: 313 PQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGF 372
+ VSW S+I +A+ G EAL LF M ++ PDA+T++ VL AC G
Sbjct: 403 VDKDVVSWNSVISGYAQSGSAYEALDLFNRM-----RMESFLPDAVTVVGVLSACASVGA 457
Query: 373 VDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALL 432
G + + +S I +++ ++ G A + + M K N W A++
Sbjct: 458 HQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEK-NAVTWAAMI 516
Query: 433 GGC 435
GGC
Sbjct: 517 GGC 519
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 170/402 (42%), Gaps = 69/402 (17%)
Query: 26 CNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHI 85
C + + +H+ ++++G T +I S Y + L+HA LF + +P+ + I
Sbjct: 50 CKHPTTVKTLHASLIISGHPPDTTLI----SLYASFGFLRHARTLFHRLPSPTHHSFKLI 105
Query: 86 IRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL---- 141
IR + + V Y +T N V LL+ Q+ IVL
Sbjct: 106 IRWHFLNDVHSHVVSFYNLARTTLGSFNDLV--------VFSILLKTASQLRDIVLTTKL 157
Query: 142 ----VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
+K ++ FV T+L++ Y+ G + AR VFD + RSVVSW S++ YV
Sbjct: 158 HCNILKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQ----- 212
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
CA++G L LF MR ++
Sbjct: 213 ---------------------NECAEEG-----LMLFNRMREGFLDGNVFTVGSLVTACT 246
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
G L G+W+H Y V +N + + L +L++MY CG IGDA VF + +
Sbjct: 247 KLGCLHQGKWVHGY-----VIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTC 301
Query: 318 ------VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
V WT+MI+ + ++G + AL LF +D + P+++TL +L AC
Sbjct: 302 GGGDDLVFWTAMIVGYTQRGYPQAALELF----TDKKWYR-ILPNSVTLASLLSACAQLE 356
Query: 372 FVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+ G+ + + + +G+ +VD+ ++ G + +AH
Sbjct: 357 NIVMGKLLHVLVVK-YGLD-DTSLRNSLVDMYAKCGLIPDAH 396
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 244/554 (44%), Gaps = 89/554 (16%)
Query: 22 LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV 81
L C ++ + Q+H+ ++ LS+ T+++ Y ++ + +AH +F S +
Sbjct: 12 LTNVCKSLLRVKQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFL 71
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG---GLLREGEQVHG 138
WN +IR +A++ ++ +R M+ + P+ +TY+ + AC G+LR VHG
Sbjct: 72 WNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDFGMLR---VVHG 128
Query: 139 IVLVKGY-----CSNVFVE--------------------------TNLINFYAGRGGVEQ 167
+ G C + V +LI+ Y G G E
Sbjct: 129 SAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEI 188
Query: 168 ARHVFD-------------------GMGQRSVVSWNSILAG------------------- 189
+F G+ S++S L G
Sbjct: 189 GIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVS 248
Query: 190 -YVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
Y C D A RVF + ++V+W+ +I+G +Q G ++AL F ++ +
Sbjct: 249 MYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVL 308
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
++ G IH YV R+ + V++++ALI MY+ CG + V
Sbjct: 309 IATVLASITQMANVLPGCEIHGYV-----LRHGLESDVKVSSALIDMYSKCGFLHLGTCV 363
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
F M +R+ +S+ SMI+A+ G +A +F M+ G + PD T +L ACC
Sbjct: 364 FRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKG-----LVPDEGTFSALLSACC 418
Query: 369 HAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALW 428
HAG V +GR +F M + I R EHY MV LL G L+EA+ L +++P + A+
Sbjct: 419 HAGLVKDGRELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAIL 478
Query: 429 GALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMI 488
GALL C + NSELA V ++ D Y V+LSNIYA RW DV +R KM+
Sbjct: 479 GALLSCCDSYGNSELAETVAQQIFKSNPADNV--YRVMLSNIYAGDGRWDDVKKLRDKMV 536
Query: 489 EMGVKKPPGQSWIQ 502
G KK G SWI+
Sbjct: 537 G-GQKKMRGVSWIE 549
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 196/413 (47%), Gaps = 43/413 (10%)
Query: 116 TYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM 175
TYS +L C+ G ++H +++ GY N +++ L+ YA G +E A+ +F+ +
Sbjct: 56 TYSLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNL 115
Query: 176 GQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFG 235
++ + +W MIAG QKG + L F
Sbjct: 116 VEK-------------------------------DSFAWNAMIAGYVQKGLEEVGLETFY 144
Query: 236 EMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHM 295
EMR+A + L+ GR H ++ + Q +V +N+ALI M
Sbjct: 145 EMRQASLRPDQYTFASVFRACATLALLEPGRQAH-----GVMLKCQIGDNVVVNSALIDM 199
Query: 296 YASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
Y C I D +F K R+T++WT++I + K G E L F M+S+ RP
Sbjct: 200 YFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISES-----FRP 254
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
+ +T + VL AC H G +DE + F SM R + + P +HY MVDLL R+G L EA+
Sbjct: 255 NYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEF 314
Query: 416 IENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAK 475
+ P K + +WGALLG C+IH + +L + K E + Y V+L+N YA +
Sbjct: 315 VLKSPYKEHSVIWGALLGACKIHGDLDLLKIASKKYF-EFERVNTGKY-VVLANAYASSG 372
Query: 476 RWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILS 528
W DV VR + E GV K PG S I++ V F GD H+ + +Y +++
Sbjct: 373 LWDDVEEVRASLRESGVTKEPGYSRIEVQKEVSFFFNGDKYHRQADEVYWVVN 425
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Query: 22 LLQSC---NNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+LQ C N +IH+ +++ G + KLL Y S L+ A LF+ +
Sbjct: 60 MLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKD 119
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
+ WN +I GY + +E + +M P+ +T++ + AC LL G Q HG
Sbjct: 120 SFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHG 179
Query: 139 IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD--- 195
++L NV V + LI+ Y + R +FD R+ ++W ++++GY G
Sbjct: 180 VMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVE 239
Query: 196 -FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
D R+ E N V++ ++ C+ G +A F M R
Sbjct: 240 VLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIR 284
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 199/398 (50%), Gaps = 21/398 (5%)
Query: 111 EPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSN-VFVETNLINFYAGRGGVEQAR 169
+P+ FT +L +C L +H ++ + +N F+ ++L+NFY + A
Sbjct: 50 DPHVFT--LVLKSCTSLHLPYLATSIHSHLIKSSFLTNNPFLSSSLLNFYGHCVSLNHAH 107
Query: 170 HVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIR-NVVSWTTMIAGCA---QKG 225
+FD R+ V WNSI+A Y + A +F+EM + N ++ +IA + Q
Sbjct: 108 QLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNESTFNPIIAALSLSNQNN 167
Query: 226 RCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPS 285
+A+S + M +++ L L + IH Y RN
Sbjct: 168 ASFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHGYAM-----RNDIDSH 222
Query: 286 VRLNNALIHMYASCGVIGDAYQVFTKMP--QRSTVSWTSMIMAFAKQGLGKEALGLFKTM 343
+L++ LI Y CG + D+ VF M + V W+++I A A G KEAL F+ M
Sbjct: 223 PQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEAKEALEFFQEM 282
Query: 344 VSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLL 403
V GV+PD IT + VL AC HAG DE F M+R +G+ P EHY C+VD+L
Sbjct: 283 -----EVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSCLVDVL 337
Query: 404 SRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGY 463
SRAG L EA+ +I+ MP+K WGALLG C + LA + K +AE++ D AA Y
Sbjct: 338 SRAGRLYEAYEVIKGMPVKVTAKAWGALLGACTNYGELGLAEIA-GKALAEVEPDNAANY 396
Query: 464 LVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWI 501
VLL+ IYA R ++ + ++M E GVK G SW+
Sbjct: 397 -VLLAKIYASVGRREEADRMIREMKEKGVKTTSGTSWV 433
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 156/409 (38%), Gaps = 93/409 (22%)
Query: 15 IQQHVFTL-LQSCNNIQN---LIQIHSQVVLNG-LSQKTNIITKLLSFYIASDQLQHAHK 69
+ HVFTL L+SC ++ IHS ++ + L+ + + LL+FY L HAH+
Sbjct: 49 LDPHVFTLVLKSCTSLHLPYLATSIHSHLIKSSFLTNNPFLSSSLLNFYGHCVSLNHAHQ 108
Query: 70 LFSTIDNPSTTVWNHIIRGYAR-----------------------------------SHT 94
LF + + +WN II Y+R ++
Sbjct: 109 LFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNESTFNPIIAALSLSNQNNA 168
Query: 95 PWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETN 154
+K++ YR+M + +P T L+ A V L +++HG
Sbjct: 169 SFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHG---------------- 212
Query: 155 LINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMP--IRNVV 212
YA R ++ + G+ + Y CG +R VF M ++VV
Sbjct: 213 ----YAMRNDIDSHPQLSSGL-----------IEAYGRCGCLMDSRTVFKNMRGCDKDVV 257
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXG--DLKLGRWIHW 270
W+ +I+ CA G K+AL F EM + V+ G D L ++
Sbjct: 258 VWSNLISACALHGEAKEALEFFQEMEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKM 317
Query: 271 YVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV-SWTSMIMAFAK 329
+ + +P+ + L+ + + G + +AY+V MP + T +W +++ A
Sbjct: 318 HRDYGV------EPNSEHYSCLVDVLSRAGRLYEAYEVIKGMPVKVTAKAWGALLGACTN 371
Query: 330 QGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
G LGL + G + V PD V+L + GRR
Sbjct: 372 YG----ELGLAEIA---GKALAEVEPDNAANYVLLAKI----YASVGRR 409
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 151/570 (26%), Positives = 244/570 (42%), Gaps = 85/570 (14%)
Query: 1 MLIERFVPASGRRSIQQHVFTLLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSF 57
ML E F P Q + +LL SC + + Q IH + G +++ L+S
Sbjct: 148 MLRENFKPN------QTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSM 201
Query: 58 YIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTY 117
Y D L+ + LF +D S WN +I Y ++ K++ +++M+ P+ T
Sbjct: 202 YAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTI 261
Query: 118 SFLLSA----------CVRGGLLREGEQVHGIV--------------LVKGY-CSNVFVE 152
L+SA V+ G + V +V L K Y ++
Sbjct: 262 MNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITL 321
Query: 153 TNLINFYAGRGGVEQARH----------------------------------VFDGMGQR 178
T +I+ Y+ +G +E A F G G +
Sbjct: 322 TAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVK 381
Query: 179 SVVS-----WNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSL 233
S +S N +++ Y + + A +F +M + +++W +MI+GC Q G+ A+ L
Sbjct: 382 SGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMEL 441
Query: 234 FGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALI 293
F EM + G+L++G +H Y+ RN + + ALI
Sbjct: 442 FSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYI-----LRNNVRVEDFIGTALI 496
Query: 294 HMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGV 353
MY+ CG + A +VF + +W ++I ++ GL A G + + G +
Sbjct: 497 DMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQG-----L 551
Query: 354 RPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAH 413
+PD IT + VL AC H G V G F M + +G+ P ++HY C+V LL + G EA
Sbjct: 552 KPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAI 611
Query: 414 GLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAF 473
I M ++P+ A+WGALL C I + +L + KL +G G+ VL+SN+YA
Sbjct: 612 EFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNG--GFYVLMSNLYAI 669
Query: 474 AKRWQDVIAVRQKMIEMGVKKPPGQSWIQI 503
RW DV VR+ M + G G S I +
Sbjct: 670 VGRWDDVARVREMMKDSGGDGCSGVSVIDV 699
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 134/332 (40%), Gaps = 62/332 (18%)
Query: 102 YRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC-SNVFVETNLINFYA 160
+RQ++ PN FT+S L+ A L H C S ++ I
Sbjct: 36 FRQILQANVNPNEFTFSLLIKA-----YLSSPSFTH--------CPSTAALQARQIQTQC 82
Query: 161 GRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAG 220
+ GV Q HV S++ Y+ G AR +FD+M R+VVSW +I G
Sbjct: 83 LKRGVNQFIHVH-----------TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICG 131
Query: 221 CAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARN 280
+Q G A+ LF +M R + + GR IH + + +
Sbjct: 132 YSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLD 191
Query: 281 QQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
LNNAL+ MYA C + + +F +M ++S VSW +MI + + GL +A+ F
Sbjct: 192 SH-----LNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYF 246
Query: 341 KTMVSDGAGVDGVRPDAITLIVVL----------CACCHAGFVDEGRRIFASMNRTWGIS 390
K M+ +G P ++T++ ++ C GF ++ + +
Sbjct: 247 KEMLK-----EGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTS--------- 292
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
+V L ++ GF + A L + P K
Sbjct: 293 --------LVCLYAKQGFTNTAKQLYKYYPTK 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QI +Q + G++Q ++ T L+ Y+ HA +F + WN +I GY+++
Sbjct: 77 QIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNG 136
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVET 153
+ +++ + M+ +PN T LL +C L+ +G +HG + G+ + +
Sbjct: 137 YLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN 196
Query: 154 NLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
L++ YA +E ++ +FD M ++SVVSWN+++ Y G FD A F EM
Sbjct: 197 ALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEM 249
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 237/501 (47%), Gaps = 49/501 (9%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+L +C+ +++ IH++V++ +S ++ L+ Y + Q A+ +FS ++
Sbjct: 221 ILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWD 280
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVS-TEAEPNGFTYSFLLSACVRGGLLREGEQVH 137
WN +I GY + K++ + Q+ + +P+ +TY+ ++SA G+ +H
Sbjct: 281 LVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLH 340
Query: 138 GIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFD 197
G V+ G+ +VFV + L++ Y E
Sbjct: 341 GQVIKAGFVRSVFVGSTLVSMYFKNQETE------------------------------- 369
Query: 198 GARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXX 257
A RVF +P ++ + WT MI G ++ A+ F EM E
Sbjct: 370 AALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCA 429
Query: 258 XXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRST 317
L+ G IH Y + + ++ +LI MYA G + AY VF+++
Sbjct: 430 YLAILRQGEIIHCYAYKL-----GYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDL 484
Query: 318 VSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGR 377
W SM+ F+ G+ +AL LF+ ++ G + PD +T + +L AC H+ V++G+
Sbjct: 485 KCWNSMLGGFSHHGMVDDALKLFEEIIKQG-----LVPDQVTFLSLLSACSHSRLVEQGK 539
Query: 378 RIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMP-LKPNDALWGALLGGCQ 436
++ M+ + G+ P +HY CMV LLSRA L+EA +I P ++ N LW LL C
Sbjct: 540 LLWNYMS-SIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDNVELWRTLLSACV 598
Query: 437 IHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPP 496
I+KN ++ +++ DG L+LLSN+YA A RW +V +R+ M + ++K P
Sbjct: 599 INKNLKVGVRAAEEVLRFNAEDGPT--LILLSNLYAAAGRWDEVAEIRRNMKGLIMEKEP 656
Query: 497 GQSWIQINGVVHDFVAGDMTH 517
G SWI+ +H F +GD +H
Sbjct: 657 GLSWIEAKNDIHVFSSGDQSH 677
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 177/436 (40%), Gaps = 55/436 (12%)
Query: 11 GRRSIQQHVFTLLQSCNNIQNLI---QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHA 67
G R + +LLQ+ + +L+ +H++ + G + T LL+ Y + L A
Sbjct: 109 GLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSA 168
Query: 68 HKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG 127
+F ++ WN +I GY ++ K V + +M+ P +T+ +LSAC R
Sbjct: 169 ESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRL 228
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
G +H V+V ++ ++ L++ Y G + A +F M + +VSWNS++
Sbjct: 229 KDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMI 288
Query: 188 AGYVSCGDFDGARRVFDEM-----PIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARV 242
+GY D + A +F ++ P + ++ +I+ A F
Sbjct: 289 SGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATG-------AFPCFS------- 334
Query: 243 EXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVI 302
G+ +H V + R SV + + L+ MY
Sbjct: 335 ---------------------YGKPLHGQVIKAGFVR-----SVFVGSTLVSMYFKNQET 368
Query: 303 GDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIV 362
A +VF +P + + WT MI ++K G A+ F M + +D L
Sbjct: 369 EAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDY-----VLSG 423
Query: 363 VLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLK 422
VL C + + +G I + G + G ++D+ ++ G L+ A+ L+ +
Sbjct: 424 VLSVCAYLAILRQGEIIHCYAYKL-GYDVEMSVSGSLIDMYAKNGNLEAAY-LVFSQVSH 481
Query: 423 PNDALWGALLGGCQIH 438
P+ W ++LGG H
Sbjct: 482 PDLKCWNSMLGGFSHH 497
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 54/332 (16%)
Query: 22 LLQSC---NNIQNLIQIHSQVVL--NGLSQKTNII-TKLLSFYIASDQLQHAHKLFSTID 75
LL+ C ++Q Q+H+ ++ N K+ + ++S Y L+ AH++F +
Sbjct: 14 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 73
Query: 76 NPSTTVWNHIIRGYAR---SHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLRE 132
+ +N ++ Y+R H + + Y QM + P+ T + LL A G L
Sbjct: 74 QRTHVSYNALLAAYSRVSEQHCVY-AFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLI 132
Query: 133 GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVS 192
G +H L G+ +++ V+T+L+N Y+ + A VF M +R V+WNS++ GY+
Sbjct: 133 GLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLK 192
Query: 193 CGDFDGARRVFDEMP----IRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXX 248
+ +F EM V ++ +++ C+ R K S
Sbjct: 193 NDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACS---RLKDYFS---------------- 233
Query: 249 XXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQV 308
GR IH R++ N P + L NAL+ MY + G AY +
Sbjct: 234 ----------------GRLIH----ARVIVGN-VSPDLHLQNALVDMYCNAGDTQTAYMI 272
Query: 309 FTKMPQRSTVSWTSMIMAFAKQGLGKEALGLF 340
F++M + VSW SMI + + G++A+ LF
Sbjct: 273 FSRMEKWDLVSWNSMISGYFENEDGEKAMNLF 304
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 27/311 (8%)
Query: 146 CSNVFVETNLINFYAGRGGVEQARHVF-------DGMGQRSVVSWNSILAGYVSCGDFDG 198
C +V +T L+ +++AR + + G +S +N+I++ Y CG +
Sbjct: 5 CFSVITDTLLLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLED 64
Query: 199 ARRVFDEMPIRNVVSWTTMIAGCAQ--KGRCKQALSLFGEMRRARVEXXXXXXXXXXXXX 256
A +VFD+MP R VS+ ++A ++ + C A +L+ +M +
Sbjct: 65 AHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAA 124
Query: 257 XXXGDLKLGRWIHWYVQQRIVARNQQ---QPSVRLNNALIHMYASCGVIGDAYQVFTKMP 313
GDL +G +H A++ + + + +L++MY+SC + A VF M
Sbjct: 125 SLHGDLLIGLLLH--------AKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMN 176
Query: 314 QRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFV 373
+R V+W S+I+ + K ++ + LF M+ G P T ++L AC
Sbjct: 177 ERDNVAWNSLILGYLKNDKIEKGVYLFIEMM-----WVGFTPTVYTFCMILSACSRLKDY 231
Query: 374 DEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLG 433
GR I A + +SP + +VD+ AG A+ + M K + W +++
Sbjct: 232 FSGRLIHARV-IVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRME-KWDLVSWNSMIS 289
Query: 434 GCQIHKNSELA 444
G +++ E A
Sbjct: 290 GYFENEDGEKA 300
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/611 (25%), Positives = 259/611 (42%), Gaps = 132/611 (21%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+LQ+C ++L IHS V+ G+ ++ +++ Y ++ A K+F +D
Sbjct: 189 VLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERD 248
Query: 79 TTVWNHIIRGYAR---------------------SHTPWK-SVECYRQMVSTEAE----- 111
+ WN +I G+ + S W + CY Q+ +
Sbjct: 249 SVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMR 308
Query: 112 --------PNGFTYSFLLSACVRGG-------LLRE------------------------ 132
P+ +T++ ++S + G LL+E
Sbjct: 309 KMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALK 368
Query: 133 ----GEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
G ++H I + NV V +LI+ Y G ++ A+H+FD M +R V SWNSI+
Sbjct: 369 SLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIG 428
Query: 189 GYVSCGDFDGARRVFDEM----------------------------------------PI 208
GY G A +F +M
Sbjct: 429 GYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTK 488
Query: 209 RNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWI 268
RN SW ++I+G Q G+ +AL +F M+ + K + I
Sbjct: 489 RNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEI 548
Query: 269 HWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFA 328
H + +RI+ + ++N LI YA G + + +F ++ + VSW SM+ ++
Sbjct: 549 HCFAVRRILV-----SELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYV 603
Query: 329 KQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWG 388
G + AL LF M G ++P+ T +L A HAG VDEG+ +F+ + + +
Sbjct: 604 LHGCSESALDLFYQMRKQG-----LQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYL 658
Query: 389 ISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVE 448
+ +EHY MV LL R+G L EA I++MP++PN ++WGALL C+IH+N +A V+
Sbjct: 659 VRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVA-VLA 717
Query: 449 PKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQINGVVH 508
K + E + G LLS Y+ ++ + E V KP GQSWI+ N VVH
Sbjct: 718 GKRMLEFEP-GNNITRHLLSQAYSLCGKF-------EPEGEKAVNKPIGQSWIERNNVVH 769
Query: 509 DFVAGDMTHKH 519
FV GD ++ +
Sbjct: 770 TFVVGDQSNPY 780
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 217/522 (41%), Gaps = 73/522 (13%)
Query: 20 FTLLQSCNNIQNLI---QIHSQVVLNGLSQKTN--IITKLLSFYIASDQLQHAHKLFSTI 74
LLQSC + + ++HS++ GL + N + TKL+S Y L A K+F+ +
Sbjct: 87 MNLLQSCIDKDCIFIGKELHSRI---GLVENVNPFVETKLVSMYAKCGLLGMARKVFNEM 143
Query: 75 DNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGE 134
+ W+ +I G +R+ + + V + M+ P+ F +L AC + L G
Sbjct: 144 SVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGR 203
Query: 135 QVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCG 194
+H +V+ +G + + +++ YA G ++ A+ +FD M +R V+WN++++G+ G
Sbjct: 204 LIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNG 263
Query: 195 DFDGARRVFDEMP---------------------------------------IRNVVSWT 215
+ A++ FD M +V +WT
Sbjct: 264 EIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWT 323
Query: 216 TMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQR 275
+MI+G QKGR AL L EM A VE L +G IH
Sbjct: 324 SMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIH-----S 378
Query: 276 IVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKE 335
I + +V + N+LI MY CG + A +F M +R SW S+I + + G +
Sbjct: 379 IAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGK 438
Query: 336 ALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEH 395
A LF M + P+ IT +++ +G D+ +F S+ +
Sbjct: 439 AHELFMKMQESDSP-----PNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAAS 493
Query: 396 YGCMVDLLSRAGFLDEAHGLIENMP---LKPNDALWGALLGGCQIHKNSELAS-----VV 447
+ ++ ++G D+A + NM + PN ++L C S+ V
Sbjct: 494 WNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAV 553
Query: 448 EPKLVAEL-------DTDGAAGYLVLLSNIYAFAKRWQDVIA 482
LV+EL D+ +G L+ NI+ W+D ++
Sbjct: 554 RRILVSELSVSNLLIDSYAKSGNLMYSKNIFN-ELSWKDAVS 594
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 133/307 (43%), Gaps = 45/307 (14%)
Query: 116 TYSFLLSACVRGGLLREGEQVHG-IVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
TY LL +C+ + G+++H I LV+ N FVET L++ YA
Sbjct: 85 TYMNLLQSCIDKDCIFIGKELHSRIGLVENV--NPFVETKLVSMYA-------------- 128
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
CG AR+VF+EM +RN+ +W+ MI GC++ + + LF
Sbjct: 129 -----------------KCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLF 171
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
M R V DL+ GR IH +V R + S L N+++
Sbjct: 172 YAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIH-----SMVIRRGMRWSKHLRNSIMA 226
Query: 295 MYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVR 354
+YA CG + A ++F M +R +V+W +MI F + G +A F M DGV
Sbjct: 227 VYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQK-----DGVE 281
Query: 355 PDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHG 414
P +T +++ G D + M +GI+P + + M+ ++ G + A
Sbjct: 282 PSLVTWNILISCYNQLGHCDLAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHALD 340
Query: 415 LIENMPL 421
L++ M L
Sbjct: 341 LLKEMFL 347
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 204 bits (518), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 240/532 (45%), Gaps = 57/532 (10%)
Query: 23 LQSCNNIQNL---IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPST 79
+ +C +NL QIH G + L+S Y L+ A +F + +
Sbjct: 297 ISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNV 356
Query: 80 TVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGI 139
W +I S V + M PN T+ LL A +++EG VHG+
Sbjct: 357 VSWTTLI-----SIDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGL 411
Query: 140 VLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA 199
L S V +LI YA +++++
Sbjct: 412 CLKSCLSSEQNVSNSLITMYAKFESIQESK------------------------------ 441
Query: 200 RRVFDEMPIRNVVSWTTMIAGCAQKGRCKQA-LSLFGEMRRARVEXXXXXXXXXXXXXXX 258
++F+E+ + +SW +I+G AQ G CK+A L+ ++ +
Sbjct: 442 -KIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAE 500
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
LK G+ H ++ I P V AL+ MY G I ++ +VF + P+++
Sbjct: 501 DISLKHGQRCHSHL---IKLGLNTDPFVA--GALLDMYGKRGNINESQRVFNETPEKTQF 555
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SWT MI A+A+ G + + L+K + +G+ +D +IT + VL ACC G VD G
Sbjct: 556 SWTGMISAYARHGDYESVMSLYKEIEREGSNLD-----SITFLSVLAACCRKGMVDVGHI 610
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
IF SM + I P EHY MVD+L R G LDEA L+ +P P ++ +LLG C++H
Sbjct: 611 IFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLH 670
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
N E+A V L+ ++D G++G VL++N+YA W+ V VR+ M GVKK G
Sbjct: 671 GNVEMAERVVDSLI-QMDP-GSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGF 728
Query: 499 SWIQINGV----VHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSYEPDITGA 546
SW+ + V +H F +GD +H S I + ++E + + S E TG
Sbjct: 729 SWVDVANVDSLHLHGFSSGDKSHPESETI-DRMAEFLGLQMIFSKESGGTGG 779
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 147/352 (41%), Gaps = 60/352 (17%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
QIH VV G + + L+ Y + + + A +F + P WN I+ G+ +S
Sbjct: 105 QIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKS- 163
Query: 94 TPWKSVECYRQMVSTEAEPNGFTYSFLLSAC-------VRGGLLREGEQVHGIVLVKGYC 146
+ C+ + +P TY+ LS C G L G Q+H +V+ G+
Sbjct: 164 VDALNFACFMHLNGVVFDP--VTYTTALSFCWDRDYWDDHGFLF--GLQLHSLVVKCGFG 219
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
VF+ L+ Y+ GG+++A VF+ M R +VSWN++L+GY
Sbjct: 220 CEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGY---------------- 263
Query: 207 PIRNVVSWTTMIAGCAQKGRCK--QALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKL 264
AQ+G C +A+ LFG M R + +L+
Sbjct: 264 ---------------AQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEF 308
Query: 265 GRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMI 324
G+ IH Q+ + V + N LI Y+ C V+ DA VF M R+ VSWT++I
Sbjct: 309 GKQIHGLAQKLGYGTH-----VAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLI 363
Query: 325 MAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEG 376
+ + LF M VDGV P+ +T I +L A V EG
Sbjct: 364 SIDEEN-----VVSLFNAM-----RVDGVYPNDVTFIGLLHAITIRNMVKEG 405
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 162/373 (43%), Gaps = 49/373 (13%)
Query: 65 QHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPN--GFTYSFLLS 122
+H H LF I P+ + N + + + P++++ ++ N T +
Sbjct: 35 KHEHNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFK 94
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVS 182
AC RG + G Q+HG V+ G+ S V V +L+ Y G E A VF+G+ +VS
Sbjct: 95 AC-RGEFIL-GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVS 152
Query: 183 WNSILAGYVSCGD-FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRAR 241
WN+IL+G+ D + A + + + V++TT ++ C + LFG
Sbjct: 153 WNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFG------ 206
Query: 242 VEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGV 301
L+L +V + V + NAL+ MY+ G
Sbjct: 207 --------------------LQL---------HSLVVKCGFGCEVFIGNALVTMYSRWGG 237
Query: 302 IGDAYQVFTKMPQRSTVSWTSMIMAFAKQG--LGKEALGLFKTMVSDGAGVDGVRPDAIT 359
+ +A +VF +M R VSW +M+ +A++G G EA+ LF MV +G +D V +
Sbjct: 238 LDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHV-----S 292
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
L + AC + ++ G++I + + G + ++ S+ L +A + ++M
Sbjct: 293 LTGAISACGYTKNLEFGKQIHG-LAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDM 351
Query: 420 PLKPNDALWGALL 432
+ N W L+
Sbjct: 352 SAR-NVVSWTTLI 363
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 181/430 (42%), Gaps = 53/430 (12%)
Query: 33 IQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARS 92
+Q+HS VV G + I L++ Y L A ++F+ + WN ++ GYA+
Sbjct: 207 LQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQE 266
Query: 93 HTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVE 152
ECY G L VR G+L + + G + GY N
Sbjct: 267 G------ECY-----------GLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKN---- 305
Query: 153 TNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVV 212
+ F G+ Q G G V N +++ Y C A+ VF +M RNVV
Sbjct: 306 ---LEFGKQIHGLAQKL----GYGTHVAVC-NVLISTYSKCKVLRDAKAVFQDMSARNVV 357
Query: 213 SWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYV 272
SWTT+I+ + +SLF MR V +K G +H
Sbjct: 358 SWTTLISIDEE-----NVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLC 412
Query: 273 QQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGL 332
+ ++ Q ++N+LI MYA I ++ ++F ++ + T+SW ++I +A+ GL
Sbjct: 413 LKSCLSSEQN-----VSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGL 467
Query: 333 GKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD--EGRRIFASMNRTWGIS 390
KEA F + + + ++P+ T VL A A + G+R + + + G++
Sbjct: 468 CKEAFLTFLSAIKE------IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKL-GLN 520
Query: 391 PRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPK 450
G ++D+ + G ++E+ + P K + W ++ H + E SV+
Sbjct: 521 TDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFS-WTGMISAYARHGDYE--SVM--S 575
Query: 451 LVAELDTDGA 460
L E++ +G+
Sbjct: 576 LYKEIEREGS 585
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 226/479 (47%), Gaps = 57/479 (11%)
Query: 21 TLLQSCNN---IQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNP 77
+LL++C I + I +H + L + I +KL+ Y + + AH LF +
Sbjct: 116 SLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKR 175
Query: 78 STTV--WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQ 135
WN +I GYA ++ Y QMV EP+ FT+ +L C GL+ GE+
Sbjct: 176 DMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEE 235
Query: 136 VHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGD 195
VH V+ G+ + FV L++ Y+ CGD
Sbjct: 236 VHRHVVRCGFWDDGFVLNALVDMYS-------------------------------KCGD 264
Query: 196 FDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXX 255
AR++F++M R+ VSW +M+ G + G +A+++F R+ ++
Sbjct: 265 IVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIF---RQMVLKGEKPDYFSISAI 321
Query: 256 XXXXGDLKLGRWIH-WYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQ 314
L +G IH W ++Q + + ++ + N+LI Y+ G + A +F MP+
Sbjct: 322 LTSVSSLDVGVQIHGWVIRQGV------EWNLSIANSLIIAYSKHGRLDKARSIFNLMPE 375
Query: 315 RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVD 374
R VSW S+I + K EA+ F+ M G PD IT + +L AC H G V+
Sbjct: 376 RDVVSWNSIISSHCKH---PEAISYFEKMEEAGE-----VPDKITFVSLLSACAHLGLVN 427
Query: 375 EGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKP-NDALWGALLG 433
+G R+FA M + I P +EHYGCMV+L RAG +++A+ +I M + LWGALL
Sbjct: 428 DGERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLY 487
Query: 434 GCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGV 492
C +H N + + KL EL+ D + VLL IY A R +D+ +R M++ G+
Sbjct: 488 ACLLHGNVTIGEISANKLF-ELEPDNEHNF-VLLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 19 VFTLLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPS 78
+ +L S +++ +QIH V+ G+ +I L+ Y +L A +F+ +
Sbjct: 318 ISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERD 377
Query: 79 TTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHG 138
WN II + + +++ + +M P+ T+ LLSAC GL+ +GE++
Sbjct: 378 VVSWNSIISSHCKHP---EAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFA 434
Query: 139 IVLVKGYCSNVFVETN-LINFYAGRGGVEQARHVFDGMGQRSV-------VSWNSILAGY 190
++ K + ++N Y G VE+A + M +V + + +L G
Sbjct: 435 LMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGN 494
Query: 191 VSCGDFDGARRVFDEMP 207
V+ G+ A ++F+ P
Sbjct: 495 VTIGEI-SANKLFELEP 510
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 242/484 (50%), Gaps = 21/484 (4%)
Query: 28 NIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIR 87
N ++ Q+H G+ + T L++ Y L ++K+F + + +N +
Sbjct: 151 NQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMS 210
Query: 88 GYARSHTPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYC 146
G ++ + ++ M ++ E +PN T ++SAC +R G+QVHG+ + C
Sbjct: 211 GLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEAC 270
Query: 147 SNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGA----RRV 202
+V V T+L++ Y+ G A VF +R++++WNS++AG + + + A R+
Sbjct: 271 DHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERM 330
Query: 203 FDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDL 262
DE + + +W ++I+G AQKG C +A F +M+ A V L
Sbjct: 331 VDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVL 390
Query: 263 KLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR--STVSW 320
+ + IH Y + V ++ L AL+ Y CG + A VF + + W
Sbjct: 391 RSAKAIHGYALRICVDKDD-----FLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFW 445
Query: 321 TSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIF 380
+MI + G + A +F M+ + V+P++ T + VL AC H+G ++ G R F
Sbjct: 446 NAMIGGYGTNGDYESAFEVFYEMLD-----EMVQPNSATFVSVLSACSHSGQIERGLRFF 500
Query: 381 ASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKN 440
M R +G+ P+ EH+GC+VDLL RAG L EA L++ + +P +++ +LLG C+ + +
Sbjct: 501 -RMIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQELA-EPPASVFDSLLGACRCYLD 558
Query: 441 SELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSW 500
S L + KL+ +++ A LV+LSNIYA RW +V +R + + G+ K G S
Sbjct: 559 SNLGEEMAMKLI-DIEPKNPAP-LVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISM 616
Query: 501 IQIN 504
I++
Sbjct: 617 IEVT 620
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 214/493 (43%), Gaps = 94/493 (19%)
Query: 22 LLQSCNNIQNLIQ---IHSQVVLNGLSQKTNIITKLLSFYIASDQ-LQHAHKLFSTIDNP 77
LL++C+N+ + Q +H+ + G + T L++ Y A+ + +A +LF + P
Sbjct: 41 LLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYALELFDEMPQP 100
Query: 78 STTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA-CVRGGLLREGEQV 136
+ T +N ++ G +R+ ++V +RQ+ PN T LLSA V+ +QV
Sbjct: 101 TITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDVKNQ--SHVQQV 158
Query: 137 HGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDF 196
H + G +V+V T+L+ Y+ G + + VF+ + ++VV++N+ ++G + G
Sbjct: 159 HCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFH 218
Query: 197 DGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
VF +M + N V+ ++++ CA
Sbjct: 219 RVVFDVFKDMTMNLEEKPNKVTLVSVVSACA----------------------------- 249
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
+++LG+ +H + ++ A + V + +L+ MY+ CG G A+ VF++
Sbjct: 250 ------TLSNIRLGKQVHG-LSMKLEACDH----VMVVTSLVDMYSKCGCWGSAFDVFSR 298
Query: 312 MPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAG 371
+R+ ++W SMI + A+ LF+ MV +G+ PD+ T ++ G
Sbjct: 299 SEKRNLITWNSMIAGMMMNSESERAVELFERMVD-----EGILPDSATWNSLISGFAQKG 353
Query: 372 FVDEGRRIFASMNRTWGISP----------------------RIEHYG------------ 397
E + F+ M + G++P I Y
Sbjct: 354 VCVEAFKYFSKM-QCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLA 412
Query: 398 -CMVDLLSRAGFLDEAHGLIENMPLKPND-ALWGALLGGCQIHKNSELASVVEPKLVAEL 455
+VD + G + A + + +KP+D A W A++GG + + E A V +++ E+
Sbjct: 413 TALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEM 472
Query: 456 DTDGAAGYLVLLS 468
+A ++ +LS
Sbjct: 473 VQPNSATFVSVLS 485
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 223/488 (45%), Gaps = 55/488 (11%)
Query: 70 LFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSA---CVR 126
+F +++ + WN +I G+ K++ + M N T +LS+ C+
Sbjct: 245 VFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMS 304
Query: 127 GG-------LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRS 179
L+ Q+H + + G S V V T L+ YA GG H+ D
Sbjct: 305 TSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGG-----HISDCF---- 355
Query: 180 VVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRR 239
+ D ++VSWT +I+ A++ +QA LF ++ R
Sbjct: 356 --------------------KLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHR 394
Query: 240 ARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASC 299
K +H +++ + +V ++NALIH Y
Sbjct: 395 ENFVLDRHTFSIALKACAYFVTEKNATEVH----SQVMKQGFHNDTV-VSNALIHAYGRS 449
Query: 300 GVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAIT 359
G + + QVFT+M VSW SM+ ++A G K+AL LFK M V PD+ T
Sbjct: 450 GSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM--------DVHPDSAT 501
Query: 360 LIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENM 419
+ +L AC HAG V+EG +IF SM + GI+P ++HY CMVDL RAG + EA LI M
Sbjct: 502 FVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKM 561
Query: 420 PLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQD 479
P+KP+ +W +LLG C+ H ++LA + K LD + Y + +SNIY+ + +
Sbjct: 562 PMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKV-LDPKNSLAY-IQMSNIYSSGGSFIE 619
Query: 480 VIAVRQKMIEMGVKKPPGQSWIQINGVVHDFVAGDMTHKHSYFIYEILSEIIKQSHVDSY 539
+R++M + V+K PG SW+++ VH+F +G H I L +I Q Y
Sbjct: 620 AGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGY 679
Query: 540 EPDITGAF 547
P+I A
Sbjct: 680 APEIGSAL 687
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 113/264 (42%), Gaps = 54/264 (20%)
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVK--GYCSNVFVETNLINFYAGRGGVEQARHVFDG 174
Y+FL AC + +++G +H +L K +++F+ NL+N Y
Sbjct: 81 YAFLFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYC-------------- 126
Query: 175 MGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLF 234
CG D AR +FD+MP RN VSWT +++G AQ G ++ +LF
Sbjct: 127 -----------------KCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALF 169
Query: 235 GEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIH 294
M D+K G +H + SV + NALI
Sbjct: 170 SGMLACFRPNEFAFASVLCACEEQ--DVKYGLQVH-----AAALKMSLDFSVYVANALIT 222
Query: 295 MYASCG---------VIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFKTMVS 345
MY+ C DA+ VF M R+ +SW SMI F +GLG +A+GLF M
Sbjct: 223 MYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMY- 281
Query: 346 DGAGVDGVRPDAITLIVVLCACCH 369
+G+R ++ TL+ VL + H
Sbjct: 282 ----CNGIRFNSTTLLGVLSSLNH 301
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 132/328 (40%), Gaps = 47/328 (14%)
Query: 23 LQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYI-ASDQLQHAHKLF-STIDNPSTT 80
+ + ++++N Q+H V +GL + ++T L+ Y + KLF T
Sbjct: 309 INNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIV 368
Query: 81 VWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIV 140
W II +A P ++ + Q+ + T+S L AC + +VH V
Sbjct: 369 SWTAIISVFAER-DPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQV 427
Query: 141 LVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGAR 200
+ +G+ ++ V LI+ Y G + + VF MG +VSWNS+L Y G A
Sbjct: 428 MKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDAL 487
Query: 201 RVFDEMPIR-NVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXX 259
+F +M + + ++ ++A C+ G ++ +F M +
Sbjct: 488 DLFKQMDVHPDSATFVALLAACSHAGLVEEGTQIFNSMTES------------------- 528
Query: 260 GDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQR-STV 318
+ P + + ++ +Y G I +A ++ KMP + +V
Sbjct: 529 --------------------HGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSV 568
Query: 319 SWTSMIMAFAKQG---LGKEALGLFKTM 343
W+S++ + K G L K A FK +
Sbjct: 569 IWSSLLGSCRKHGEADLAKLAADKFKVL 596
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 138/338 (40%), Gaps = 49/338 (14%)
Query: 50 IITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTE 109
+ LL+ Y L +A LF + + W ++ GYA+ + + M++
Sbjct: 117 LTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLAC- 175
Query: 110 AEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYA----GRGG- 164
PN F ++ +L AC + + G QVH L +V+V LI Y+ G GG
Sbjct: 176 FRPNEFAFASVLCACEEQDV-KYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGS 234
Query: 165 ----VEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNV-VSWTTMIA 219
+ A VF M R+++SWNS+++G+ G D A +F M + + TT++
Sbjct: 235 CDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLG 294
Query: 220 GCAQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVAR 279
+ C +S ++ LK +H + +
Sbjct: 295 VLSSLNHC---MSTSDDINNTH-------------------HLKNCFQLHC-----LTVK 327
Query: 280 NQQQPSVRLNNALIHMYASC-GVIGDAYQVFTKMP-QRSTVSWTSMIMAFAKQGLGKEAL 337
+ V + AL+ YA G I D +++F + VSWT++I FA++ ++A
Sbjct: 328 SGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD-PEQAF 386
Query: 338 GLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDE 375
LF + + + D T + L AC A FV E
Sbjct: 387 LLFCQLHRENFVL-----DRHTFSIALKAC--AYFVTE 417
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 216/461 (46%), Gaps = 50/461 (10%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTV-WNHIIRGYARSHTPWKSVEC 101
G + N + SF+ ++ A +F ++ V WN ++ + + + ++
Sbjct: 321 GYTAVNNATMTMYSFF---GKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILT 377
Query: 102 YRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAG 161
Y +M EP+ FTY LLSA L+ E +H VL K + V V LI+ Y+
Sbjct: 378 YIKMRREGIEPDAFTYGSLLSA---SDSLQMVEMIHS-VLCKNGLNKVEVLNALISSYSR 433
Query: 162 RGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARRVFDEMPIRNVVSWTTMIAGC 221
G +++A +F + +S++SWNSI++G+V
Sbjct: 434 NGQIKRAFQIFSDLAYKSLISWNSIISGFV------------------------------ 463
Query: 222 AQKGRCKQALSLFGEMRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQ 281
G Q L F + ++ D+ G+ +H Y + R+
Sbjct: 464 -LNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGY-----ILRHG 517
Query: 282 QQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTVSWTSMIMAFAKQGLGKEALGLFK 341
+ L NAL+ MY+ CG + + VF +M +R T++W ++I A+++ G GKEA+ F+
Sbjct: 518 FDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFE 577
Query: 342 TMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVD 401
M G++PD T VL AC H+G VD+ RIF M +G P ++H+ C+VD
Sbjct: 578 AMQIS----PGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPSVDHFSCIVD 633
Query: 402 LLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIHKNSELASVVEPKLVAELDTDGAA 461
LL R+G+LDEA ++ + + + +L C +H N L V +L+ E + + +
Sbjct: 634 LLGRSGYLDEAERVVTDGYFGAHPNMCWSLFSACAVHGNLTLGRKV-ARLLLEREQNNPS 692
Query: 462 GYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQSWIQ 502
Y VLL+NI A A +W++ +R + + G K PG SWI
Sbjct: 693 VY-VLLANICAEAGQWEEAAKLRDMVKQFGTTKQPGCSWIS 732
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 122/234 (52%), Gaps = 9/234 (3%)
Query: 12 RRSIQQHVFT---LLQSCNNIQNLIQIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAH 68
R I+ FT LL + +++Q + IHS + NGL+ K ++ L+S Y + Q++ A
Sbjct: 383 REGIEPDAFTYGSLLSASDSLQMVEMIHSVLCKNGLN-KVEVLNALISSYSRNGQIKRAF 441
Query: 69 KLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGG 128
++FS + S WN II G+ + P + +E + +++T +PN ++ S LS C
Sbjct: 442 QIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTP 501
Query: 129 LLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILA 188
+ G+QVHG +L G+ S + + L+ Y+ G ++++ VF+ M +R ++WN+I++
Sbjct: 502 DMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIIS 561
Query: 189 GYVSCGDFDGARRVFDEMPIR-----NVVSWTTMIAGCAQKGRCKQALSLFGEM 237
Y G A F+ M I + ++T +++ C+ G A +F M
Sbjct: 562 AYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIM 615
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 14/299 (4%)
Query: 73 TIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRG-GLLR 131
T N NH + +++ ++S++ + ++ S+ +P+ T S ++A + +
Sbjct: 14 TFSNQQILKLNHKLTHLTKTNQFYESLKLFTKIHSSH-KPDHCTLSTTITATSKTRHVTV 72
Query: 132 EGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYV 191
G Q+H + + V +L++ YA + VFD + V SW ++L+
Sbjct: 73 FGNQLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAIS 132
Query: 192 SCGDFDGARRVFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEMRRARVEXXXXXXXX 251
D D A VFD+MP V W +I GC+ G A L +M R V
Sbjct: 133 RLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFAT 192
Query: 252 XXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTK 311
L GR +H +V ++ + N+LI MY +CG + D Y+VF +
Sbjct: 193 MLSLCPLSEGLDYGRHVH-----SVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEE 247
Query: 312 MPQ--RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACC 368
M R+ V++ +MI F ++A +F+ M + V T + VL +CC
Sbjct: 248 MEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEV-----TFVSVLSSCC 301
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 167/439 (38%), Gaps = 91/439 (20%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYAR-- 91
Q+HS + L +++ LLS Y + L +F I P W ++ +R
Sbjct: 76 QLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLS 135
Query: 92 -----SHTPWKSVECY------------------------RQMVSTEAEPNGFTYSFLLS 122
H K +CY + M + +T++ +LS
Sbjct: 136 DIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLS 195
Query: 123 ACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGM--GQRSV 180
C L G VH +V+ G+ V +LI Y G V VF+ M G R+
Sbjct: 196 LCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNH 255
Query: 181 VSWNSILAGYVSCGDFDGARRVFDEMPIRNV----VSWTTMIAGCAQKGRCKQALSLFGE 236
V++N+++ G+VS F+ A +F +M +V V++ ++++ C QA L
Sbjct: 256 VTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGCQAQGL--- 312
Query: 237 MRRARVEXXXXXXXXXXXXXXXXGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMY 296
+K+G + +NNA + MY
Sbjct: 313 ------------------------AIKMGFDCGY---------------TAVNNATMTMY 333
Query: 297 ASCGVIGDAYQVFTKMPQ-RSTVSWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRP 355
+ G + +A VF M + R VSW M+ F ++ + ++A+ + M +G+ P
Sbjct: 334 SFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRR-----EGIEP 388
Query: 356 DAITLIVVLCACCHAGFVDEGRRIFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGL 415
DA T +L A V+ + G++ ++E ++ SR G + A +
Sbjct: 389 DAFTYGSLLSASDSLQMVEMIHSVLCKN----GLN-KVEVLNALISSYSRNGQIKRAFQI 443
Query: 416 IENMPLKPNDALWGALLGG 434
++ K + W +++ G
Sbjct: 444 FSDLAYKSLIS-WNSIISG 461
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 34 QIHSQVVLNGLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH 93
Q+H ++ +G + ++ L++ Y L + +F+ + T WN II Y++
Sbjct: 508 QVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHG 567
Query: 94 TPWKSVECYRQM-VSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL-VKGYCSNVFV 151
++V C+ M +S +P+ T++ +LSAC GL+ + ++ I++ + G+ +V
Sbjct: 568 QGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPSVDH 627
Query: 152 ETNLINFYAGRGGVEQA-RHVFDG-MGQRSVVSWNSILAGYVSCGDFDGAR---RVFDEM 206
+ +++ G +++A R V DG G + W S+ + G+ R R+ E
Sbjct: 628 FSCIVDLLGRSGYLDEAERVVTDGYFGAHPNMCW-SLFSACAVHGNLTLGRKVARLLLER 686
Query: 207 PIRNVVSWTTMIAGCAQKGRCKQALSL 233
N + + CA+ G+ ++A L
Sbjct: 687 EQNNPSVYVLLANICAEAGQWEEAAKL 713
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 215/422 (50%), Gaps = 18/422 (4%)
Query: 82 WNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFTYSFLLSACVRGGLLREGEQVHGIVL 141
W I+ S +P K+++ Y +M + F F L + R L +H ++
Sbjct: 5 WALAIKKAYSSSSPRKAIQLYSKMHRNGVPIDTFCILFTLKSSTR---LPIIHHLHAHII 61
Query: 142 VKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSILAGYVSCGDFDGARR 201
G+ S+ + T L+N Y ++ A +FD M QR V+WN+++ GY D AR+
Sbjct: 62 KLGFTSHFHISTCLLNSYVFLSFLD-ACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQ 120
Query: 202 VFDEMPIRNVVSWTTMIAGCAQKGRCKQALSLFGEM---RRARVEXXXXXXXXXXXXXXX 258
+FDEMP R++VSW MI+ G Q+L LF M + +
Sbjct: 121 LFDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVE 180
Query: 259 XGDLKLGRWIHWYVQQRIVARNQQQPSVRLNNALIHMYASCGVIGDAYQVFTKMPQRSTV 318
L G+ +H Y+ +N + +V + AL++MYA GV+ +A V M +R
Sbjct: 181 RHGLLGGKSVHGYI-----VKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVT 235
Query: 319 SWTSMIMAFAKQGLGKEALGLFKTMVSDGAGVDGVRPDAITLIVVLCACCHAGFVDEGRR 378
SWT MI + G KEAL +F+ M +DGV+P+ +T VL AC H GFV++GRR
Sbjct: 236 SWTLMICGAVRCGFNKEALVVFEKM-----QMDGVKPNELTFTGVLSACAHGGFVEDGRR 290
Query: 379 IFASMNRTWGISPRIEHYGCMVDLLSRAGFLDEAHGLIENMPLKPNDALWGALLGGCQIH 438
F M G+ PR++HY C+V L+ ++G L+EA+ +I+ M ++P+ + G+ L C+ H
Sbjct: 291 YF-KMIEECGLKPRVQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEH 349
Query: 439 KNSELASVVEPKLVAELDTDGAAGYLVLLSNIYAFAKRWQDVIAVRQKMIEMGVKKPPGQ 498
K E+A V +++ + G L++++Y + ++ +++ +I+ +++ G
Sbjct: 350 KQFEIAEGVIEQVLRMAKPENYRGLYSLIADLYVIGDKSEEAERMKKLIIKEHLRQAKGL 409
Query: 499 SW 500
++
Sbjct: 410 NF 411
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 41/222 (18%)
Query: 43 GLSQKTNIITKLLSFYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSH--------- 93
G + +I T LL+ Y+ L A LF + T WN +I GY+R
Sbjct: 64 GFTSHFHISTCLLNSYVFLSFLD-ACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQLF 122
Query: 94 --------TPW--------------KSVECYRQMVSTEA-EPNGFTYSFLLSACV---RG 127
W +S+ +R+M+ E +P+ +LS C R
Sbjct: 123 DEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERH 182
Query: 128 GLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMGQRSVVSWNSIL 187
GLL G+ VHG ++ G+ NV + L+N YA G + A V + M +R V SW ++
Sbjct: 183 GLL-GGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMI 241
Query: 188 AGYVSCGDFDGARRVFDEMPIR----NVVSWTTMIAGCAQKG 225
G V CG A VF++M + N +++T +++ CA G
Sbjct: 242 CGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGG 283
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 2 LIERFVPASGRRSIQQHVFTLLQSCNNIQN--LI---QIHSQVVLNGLSQKTNIITKLLS 56
L R + G + Q +L C +++ L+ +H +V NG I L++
Sbjct: 152 LFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELNVEIGAALVN 211
Query: 57 FYIASDQLQHAHKLFSTIDNPSTTVWNHIIRGYARSHTPWKSVECYRQMVSTEAEPNGFT 116
Y L++A + +D T W +I G R +++ + +M +PN T
Sbjct: 212 MYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVRCGFNKEALVVFEKMQMDGVKPNELT 271
Query: 117 YSFLLSACVRGGLLREGEQVHGIVLVKGYCSNVFVETNLINFYAGRGGVEQARHVFDGMG 176
++ +LSAC GG + +G + ++ G V L+ G +E+A + M
Sbjct: 272 FTGVLSACAHGGFVEDGRRYFKMIEECGLKPRVQHYACLVYLIGKSGMLEEAYEIIKMMK 331
Query: 177 -QRSVVSWNSILAGYVSCGDFDGARRVFDEM 206
+ VV S L+ F+ A V +++
Sbjct: 332 VEPDVVVLGSFLSACKEHKQFEIAEGVIEQV 362