Miyakogusa Predicted Gene

Lj4g3v1658720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1658720.1 Non Characterized Hit- tr|I3S6Q9|I3S6Q9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.29,0,rpe:
ribulose-phosphate 3-epimerase,Ribulose-phosphate 3-epimerase-like;
Ribul_P_3_epim,Ribulose-pho,CUFF.49585.1
         (283 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g108800.2 | ribulose-phosphate 3-epimerase | HC | chr4:450...   513   e-145
Medtr4g108800.1 | ribulose-phosphate 3-epimerase | HC | chr4:450...   513   e-145
Medtr0937s0020.1 | class II fructose-bisphosphate aldolase | LC ...   171   8e-43
Medtr7g029630.1 | ribulose-phosphate 3-epimerase | HC | chr7:106...   154   1e-37
Medtr7g029630.2 | ribulose-phosphate 3-epimerase | HC | chr7:106...    87   2e-17
Medtr3g449340.1 | ribulose-phosphate 3-epimerase | HC | chr3:167...    62   5e-10
Medtr4g089175.1 | ribulose-phosphate 3-epimerase | LC | chr4:358...    59   7e-09

>Medtr4g108800.2 | ribulose-phosphate 3-epimerase | HC |
           chr4:45083256-45087565 | 20130731
          Length = 281

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/272 (94%), Positives = 263/272 (96%), Gaps = 4/272 (1%)

Query: 12  QSQINGPSSLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANF 71
           QSQING  SLH K ++F  HPRSLTFSRRKIST+VKASSRVDKFSKSDIIVSPSILSANF
Sbjct: 14  QSQING-LSLH-KNSLF--HPRSLTFSRRKISTVVKASSRVDKFSKSDIIVSPSILSANF 69

Query: 72  AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQ 131
           AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+VDALRPVTDLPLDVHLMIVEP+Q
Sbjct: 70  AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQ 129

Query: 132 RVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD 191
           RVPDFIKAGADIVSIHCEQSSTIHLHR +NQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD
Sbjct: 130 RVPDFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD 189

Query: 192 LVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGAN 251
           LVLIMSVNPGFGGQSFIESQVKKISDLRRLC EKGVNPWIEVDGGVTPANAYKVIEAGAN
Sbjct: 190 LVLIMSVNPGFGGQSFIESQVKKISDLRRLCVEKGVNPWIEVDGGVTPANAYKVIEAGAN 249

Query: 252 ALVAGSAVFGAKDYAEAIKGIKTSKRPEPVAV 283
           ALVAGSAVFGAKDYAEAIKGIK SKRPEPV+V
Sbjct: 250 ALVAGSAVFGAKDYAEAIKGIKASKRPEPVSV 281


>Medtr4g108800.1 | ribulose-phosphate 3-epimerase | HC |
           chr4:45083433-45087458 | 20130731
          Length = 281

 Score =  513 bits (1320), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/272 (94%), Positives = 263/272 (96%), Gaps = 4/272 (1%)

Query: 12  QSQINGPSSLHSKTAIFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANF 71
           QSQING  SLH K ++F  HPRSLTFSRRKIST+VKASSRVDKFSKSDIIVSPSILSANF
Sbjct: 14  QSQING-LSLH-KNSLF--HPRSLTFSRRKISTVVKASSRVDKFSKSDIIVSPSILSANF 69

Query: 72  AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQ 131
           AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPL+VDALRPVTDLPLDVHLMIVEP+Q
Sbjct: 70  AKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPDQ 129

Query: 132 RVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD 191
           RVPDFIKAGADIVSIHCEQSSTIHLHR +NQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD
Sbjct: 130 RVPDFIKAGADIVSIHCEQSSTIHLHRAINQVKSLGAKAGVVLNPGTPLSAIEYVLDVVD 189

Query: 192 LVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVTPANAYKVIEAGAN 251
           LVLIMSVNPGFGGQSFIESQVKKISDLRRLC EKGVNPWIEVDGGVTPANAYKVIEAGAN
Sbjct: 190 LVLIMSVNPGFGGQSFIESQVKKISDLRRLCVEKGVNPWIEVDGGVTPANAYKVIEAGAN 249

Query: 252 ALVAGSAVFGAKDYAEAIKGIKTSKRPEPVAV 283
           ALVAGSAVFGAKDYAEAIKGIK SKRPEPV+V
Sbjct: 250 ALVAGSAVFGAKDYAEAIKGIKASKRPEPVSV 281


>Medtr0937s0020.1 | class II fructose-bisphosphate aldolase | LC |
           scaffold0937:3855-1321 | 20130731
          Length = 776

 Score =  171 bits (433), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/189 (48%), Positives = 128/189 (67%), Gaps = 12/189 (6%)

Query: 27  IFNNHPRSLTFSRRKISTIVKASSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGC 86
           +F   P    F  RK   + + ++R         I    +LSA+FA+LG++V+A+E AG 
Sbjct: 291 LFAKQPSE--FDPRKAFAVARQAAR--------DICKVRLLSADFARLGDEVRAIEAAGA 340

Query: 87  DWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSI 146
           DW+H DVMD  +VPN+T+GP++  ALRP T LP+DVHLM+   +  V  F +AGA+ +S 
Sbjct: 341 DWLHFDVMDNHYVPNLTVGPMVCAALRPYTSLPIDVHLMVRPVDALVDAFAQAGANSISF 400

Query: 147 HCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDVVDLVLIMSVNPGFGGQS 206
           H E S   H+HRTV+Q+K+ G +AG+ LNP TPL+ +  +LD +D VL+MSVNPGFGGQS
Sbjct: 401 HPEASD--HVHRTVHQIKNRGCRAGLALNPATPLTWLSELLDDLDFVLLMSVNPGFGGQS 458

Query: 207 FIESQVKKI 215
           FIES ++KI
Sbjct: 459 FIESVLQKI 467


>Medtr7g029630.1 | ribulose-phosphate 3-epimerase | HC |
           chr7:10692033-10698070 | 20130731
          Length = 223

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 130/217 (59%), Gaps = 8/217 (3%)

Query: 62  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 121
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+T+G  I+++LR  T+  LD
Sbjct: 7   IAPSMLSSDFANLASEAHRMINYGADWLHMDIMDGHFVPNLTMGAPIIESLRKHTEAYLD 66

Query: 122 VHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLS 181
            HLM+  P   V    KAGA   + H E S   +    +  +KS G + GV + PGT + 
Sbjct: 67  CHLMVTNPLDYVEPLGKAGASGFTFHIETSKD-NWKELIQNIKSHGMRPGVSIKPGTSVE 125

Query: 182 AIEYVLDV---VDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVT 238
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR+    K  +  IEVDGG+ 
Sbjct: 126 EVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMDKVRILRK----KYPSLDIEVDGGLG 181

Query: 239 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKTS 275
           P+       AGAN +VAGS+VFGA + A  I  +++S
Sbjct: 182 PSTIDVAASAGANCIVAGSSVFGAPEPAHVISLLRSS 218


>Medtr7g029630.2 | ribulose-phosphate 3-epimerase | HC |
           chr7:10692002-10698133 | 20130731
          Length = 178

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 4/127 (3%)

Query: 97  RFVPNITIGPLIVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSIHCEQSSTIHL 156
            FVPN+T+G  I+++LR  T+  LD HLM+  P   V    KAGA   + H E S   + 
Sbjct: 15  HFVPNLTMGAPIIESLRKHTEAYLDCHLMVTNPLDYVEPLGKAGASGFTFHIETSKD-NW 73

Query: 157 HRTVNQVKSLGAKAGVVLNPGTPLSAIEYVLDV---VDLVLIMSVNPGFGGQSFIESQVK 213
              +  +KS G + GV + PGT +  +  +++    V++VL+M+V PGFGGQ F+   + 
Sbjct: 74  KELIQNIKSHGMRPGVSIKPGTSVEEVYPLVEAENPVEMVLVMTVEPGFGGQKFMPEMMD 133

Query: 214 KISDLRR 220
           K+  LR+
Sbjct: 134 KVRILRK 140


>Medtr3g449340.1 | ribulose-phosphate 3-epimerase | HC |
           chr3:16723064-16724679 | 20130731
          Length = 156

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 18/138 (13%)

Query: 125 MIVEPEQRVPDFIKAGADIVSIHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPGTPLSAIE 184
           M+  P   V    KAGA  +      +S  +    +  +KS G + GV + PGT +  + 
Sbjct: 1   MVTNPLDYVEPLGKAGASGLG-----TSKDNWKELIQNIKSHGMRPGVSIKPGTSVEEV- 54

Query: 185 YVL--------DVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGG 236
           Y L        + V++VL+M+V PGFGGQ F+   + K+  LR+    K  +  IEVDGG
Sbjct: 55  YPLCFSLVEAENPVEMVLVMTVEPGFGGQKFMPGMMDKVRILRK----KYPSLDIEVDGG 110

Query: 237 VTPANAYKVIEAGANALV 254
           + P+       AGAN +V
Sbjct: 111 LGPSTIDVAASAGANCIV 128


>Medtr4g089175.1 | ribulose-phosphate 3-epimerase | LC |
           chr4:35817847-35817424 | 20130731
          Length = 100

 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/30 (83%), Positives = 28/30 (93%)

Query: 79  KAVELAGCDWIHVDVMDGRFVPNITIGPLI 108
           KAV+LAGCDWIH DVMDGRFV +ITIGPL+
Sbjct: 22  KAVKLAGCDWIHGDVMDGRFVQDITIGPLL 51