Miyakogusa Predicted Gene

Lj4g3v1648700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1648700.1 tr|B9DFD3|B9DFD3_ARATH AT5G03730 protein
(Fragment) OS=Arabidopsis thaliana GN=AT5G03730 PE=2
SV=1,62.86,1e-18,EDR1,Armadillo repeat-containing protein 3 and
Serine/threonine-protein kinase CTR1; seg,NULL,CUFF.49539.1
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g061190.1 | ethylene-responsive kinase | HC | chr1:2669917...   298   4e-81
Medtr1g050690.1 | MAP kinase kinase kinase-like protein | HC | c...   148   6e-36
Medtr5g066490.1 | ethylene-responsive kinase Le-CTR1 | HC | chr5...   110   2e-24
Medtr3g100090.1 | ethylene-responsive kinase Le-CTR1 | HC | chr3...   109   3e-24
Medtr1g081790.1 | MAP kinase kinase kinase-like protein | HC | c...    59   5e-09
Medtr1g081790.2 | MAP kinase kinase kinase-like protein | HC | c...    59   5e-09
Medtr1g016300.1 | MAP kinase kinase kinase-like protein | HC | c...    55   9e-08
Medtr1g016300.2 | MAP kinase kinase kinase-like protein | HC | c...    55   9e-08
Medtr8g107000.1 | MAP kinase kinase kinase-like protein | HC | c...    54   1e-07
Medtr6g079540.1 | MAP kinase kinase kinase-like protein | HC | c...    52   4e-07

>Medtr1g061190.1 | ethylene-responsive kinase | HC |
           chr1:26699170-26689191 | 20130731
          Length = 829

 Score =  298 bits (762), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 176/289 (60%), Positives = 191/289 (66%), Gaps = 24/289 (8%)

Query: 1   MEMPARRTNYSLLSQVPDDQFT-------AAPSSSGDGKPTRTA---------RSDWIXX 44
           MEMPARR+NYS+LSQVPDDQF+        APSSS DGK +R            ++ I  
Sbjct: 1   MEMPARRSNYSILSQVPDDQFSYAASASAPAPSSSSDGKASRGGWELVGDHRQGNNRIGN 60

Query: 45  XXXXXXXXXXXXXXXXXXXXXXXXXX--XYAPTL---AASEVDGAFGYFHEEG--RNRLV 97
                                        YA  L   AASEVD AFGY HE G  R +L 
Sbjct: 61  LNLYSSIGLQRQSSGSSYGESSLASGGDYYAQNLSAVAASEVD-AFGYLHEVGEVRGKLA 119

Query: 98  EAPGRASGSSGKSWAQQTEESYXXXXXXXXXXXXDATCADDPNFLDQAPDESSMRLPLSP 157
           E+     GSSGKSWAQQTEESY            DATCADDPNFLD  PD+++ RL  S 
Sbjct: 120 ESAAWNGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDDAASRLSASA 179

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQEN RIPSVDTLKSV P ID
Sbjct: 180 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENSRIPSVDTLKSVHPRID 239

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
           SSL+VVLVDRRSD +LRELQN VH+IS SS+TT EVVD LSKLVCN MG
Sbjct: 240 SSLDVVLVDRRSDASLRELQNMVHNISCSSITTTEVVDQLSKLVCNCMG 288


>Medtr1g050690.1 | MAP kinase kinase kinase-like protein | HC |
           chr1:19604752-19616695 | 20130731
          Length = 680

 Score =  148 bits (373), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 4/162 (2%)

Query: 109 KSWAQQTEESYXXXXXXXXXXXXDATCADDPN-FLD---QAPDESSMRLPLSPEAVSHRF 164
           KSWA+QTEESY             +  +   N FLD    +    S     SP+++SHRF
Sbjct: 35  KSWAKQTEESYQLQLALALRISSHSASSAQSNRFLDLESTSSPSPSSSSSDSPQSLSHRF 94

Query: 165 WVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSLEVVL 224
           WVNGCL YSDK+ DGFYLIHGMD+Y WT+ TD+Q  G IPS ++L SV PC +SS+ VV 
Sbjct: 95  WVNGCLQYSDKVLDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVA 154

Query: 225 VDRRSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
           +D+  DP LRELQ+ V S+SS+ +T  +  D L+ LVC+RMG
Sbjct: 155 IDKSRDPALRELQSGVLSLSSNWITIKDATDQLANLVCSRMG 196


>Medtr5g066490.1 | ethylene-responsive kinase Le-CTR1 | HC |
           chr5:28054876-28046840 | 20130731
          Length = 916

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 7/159 (4%)

Query: 109 KSWAQQTEESYXXXXXXXXXXXXDATCADDPNFLDQAPDESSMRLPLSPEAVSHRFWVNG 168
           K++A++ +ESY             +T   +P        E+        E+VS R WV G
Sbjct: 222 KNYAKECKESYELQTALAKRLSFLSTFGSEPVLTFDTGLET-----WDVESVSRRLWVTG 276

Query: 169 CLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGR-IPSVDTLKSVDPCIDSSLEVVLVDR 227
           CLSY+DKI DGFY I GM+ Y+W +C D++E G  +P++  LK+V+P  +SSLEV+L+DR
Sbjct: 277 CLSYTDKIADGFYNILGMNPYLWVMCNDMEEEGNFLPTLMALKAVEPN-ESSLEVILIDR 335

Query: 228 RSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
           R D  L+ LQ+    + S+S     +V+ L KLV   MG
Sbjct: 336 REDSRLQVLQDKAQELYSASENALVLVEKLGKLVAIFMG 374


>Medtr3g100090.1 | ethylene-responsive kinase Le-CTR1 | HC |
           chr3:45973336-45981234 | 20130731
          Length = 926

 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 74/109 (67%), Gaps = 1/109 (0%)

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           E+VS+R WV+GCLSY+DKI DGFY I GM+ Y+W +C D +E  +IP++  LK+V+P  +
Sbjct: 230 ESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDEEEGKKIPTLMALKAVEPS-E 288

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMG 266
           +S+EVVLVDR+ D  L+ L +    +  SS  T   V+ L KLV   MG
Sbjct: 289 ASMEVVLVDRQEDSRLKLLHDKAQELYRSSENTLVFVEQLGKLVAINMG 337


>Medtr1g081790.1 | MAP kinase kinase kinase-like protein | HC |
           chr1:36400984-36409851 | 20130731
          Length = 970

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 11/111 (9%)

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           EA+S ++W    L Y +K+ DGFY ++G+         D    G++PS+  L++ +P  D
Sbjct: 142 EALSRQYWEYNVLDYEEKVVDGFYDVYGL-------SNDPAMQGKMPSLADLEA-NPG-D 192

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSSLTT--AEVVDHLSKLVCNRMG 266
           SS EVV+V++  DP L EL      IS     T    +V  L++LV + MG
Sbjct: 193 SSFEVVIVNQTIDPALEELVQIAQCISFDCPVTEIGILVQRLAELVTSHMG 243


>Medtr1g081790.2 | MAP kinase kinase kinase-like protein | HC |
           chr1:36400984-36409239 | 20130731
          Length = 926

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 11/111 (9%)

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           EA+S ++W    L Y +K+ DGFY ++G+         D    G++PS+  L++ +P  D
Sbjct: 142 EALSRQYWEYNVLDYEEKVVDGFYDVYGL-------SNDPAMQGKMPSLADLEA-NPG-D 192

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSSLTT--AEVVDHLSKLVCNRMG 266
           SS EVV+V++  DP L EL      IS     T    +V  L++LV + MG
Sbjct: 193 SSFEVVIVNQTIDPALEELVQIAQCISFDCPVTEIGILVQRLAELVTSHMG 243


>Medtr1g016300.1 | MAP kinase kinase kinase-like protein | HC |
           chr1:4311042-4320959 | 20130731
          Length = 930

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 13/112 (11%)

Query: 161 SHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSL 220
           S R+W    ++Y +K+ DGFY ++G+D+        L E G++P +  LK+V    +   
Sbjct: 134 SLRYWNYNVIAYDEKVMDGFYDVYGIDA-------SLIERGKMPLLVDLKTVPTSRNVDY 186

Query: 221 EVVLVDRRSDPTLRELQNTVH------SISSSSLTTAEVVDHLSKLVCNRMG 266
           EV+ V+R  D  L +L+          S++   L  + ++  L+ +V NRMG
Sbjct: 187 EVISVNRVVDVELSQLEEKARALFEECSVTELGLFLSGLIQKLADVVVNRMG 238


>Medtr1g016300.2 | MAP kinase kinase kinase-like protein | HC |
           chr1:4311042-4319013 | 20130731
          Length = 830

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 13/112 (11%)

Query: 161 SHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSL 220
           S R+W    ++Y +K+ DGFY ++G+D+        L E G++P +  LK+V    +   
Sbjct: 134 SLRYWNYNVIAYDEKVMDGFYDVYGIDA-------SLIERGKMPLLVDLKTVPTSRNVDY 186

Query: 221 EVVLVDRRSDPTLRELQNTVH------SISSSSLTTAEVVDHLSKLVCNRMG 266
           EV+ V+R  D  L +L+          S++   L  + ++  L+ +V NRMG
Sbjct: 187 EVISVNRVVDVELSQLEEKARALFEECSVTELGLFLSGLIQKLADVVVNRMG 238


>Medtr8g107000.1 | MAP kinase kinase kinase-like protein | HC |
           chr8:45198934-45205323 | 20130731
          Length = 1012

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 14/115 (12%)

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           E V++R+W    L Y DKI DGFY ++G       V TD   + R+PS+  L+      D
Sbjct: 135 EVVAYRYWNYNALGYDDKISDGFYDLYG-------VLTD-STSTRMPSLIDLQGTPTAND 186

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSSLTTAEV------VDHLSKLVCNRMG 266
              E VLV+R +D  L +L+      +  S    E+      V  L+ LV   MG
Sbjct: 187 VKWEAVLVNRVADSNLLKLEQKAMGFAVKSREDFEIVVDRNLVHKLAILVAEYMG 241


>Medtr6g079540.1 | MAP kinase kinase kinase-like protein | HC |
           chr6:30000087-30007922 | 20130731
          Length = 943

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 14/115 (12%)

Query: 158 EAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCID 217
           E V++R+W    L Y DKI DGFY ++G    + T  T      RIPS+  L+      +
Sbjct: 144 EIVAYRYWNYNALGYDDKILDGFYDLYG----ILTEST----TARIPSLVDLQGTPISSN 195

Query: 218 SSLEVVLVDRRSDPTLRELQNTVHSISSSS------LTTAEVVDHLSKLVCNRMG 266
              E VLV+R +D  L +L+     ++  S      +  A++V  L+  V + MG
Sbjct: 196 VKWEAVLVNRAADSNLLKLEQKALELTGKSRRDLEVVVYADLVHKLALFVADYMG 250