Miyakogusa Predicted Gene

Lj4g3v1614750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1614750.1 Non Characterized Hit- tr|B9R946|B9R946_RICCO
Voltage-dependent anion-selective channel, putative
OS,41.35,2e-18,VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1, 2,NULL;
VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL,NULL;,CUFF.49482.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107840.1 | porin/voltage-dependent anion-selective channe...   132   9e-32
Medtr7g009330.1 | porin/voltage-dependent anion-selective channe...    62   1e-10
Medtr6g011390.1 | porin/voltage-dependent anion-selective channe...    58   2e-09
Medtr8g469150.1 | porin/voltage-dependent anion-selective channe...    54   2e-08
Medtr8g469150.2 | porin/voltage-dependent anion-selective channe...    54   2e-08

>Medtr4g107840.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr4:44696072-44694242 | 20130731
          Length = 244

 Score =  132 bits (331), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 73/103 (70%)

Query: 1   MDWNMDLACQVEEIVPGFKSLFKCTIPDSGKVELRYLNNFIGITGCIGLRGNIERGYDPV 60
           MDWN   +C+V+EI+PGF+++FKCT+PDSGKVEL+YLN F GITGCIGL GN E  YDPV
Sbjct: 36  MDWNAGFSCKVQEILPGFRTVFKCTVPDSGKVELQYLNRFTGITGCIGLLGNEEGAYDPV 95

Query: 61  LNFXXXXXXXXXXXXANVAFDIPTRTIDKLNAGFNFKSSFLDA 103
           +              ANVA  IPTR+I KL AGF   ++FL+A
Sbjct: 96  VKLSGLLGTSILSLGANVALHIPTRSITKLTAGFGLNTAFLEA 138


>Medtr7g009330.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr7:2022950-2017988 | 20130731
          Length = 277

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 8/97 (8%)

Query: 2   DWNMDLACQVEEIVPGFKSLFKCTIPD--SGKVELRYLNNFIGITGCIGLRGNIERGYDP 59
           + N+     V E  PG K++  C +PD  SGKVEL+YL+++ GI+G IGL+ N      P
Sbjct: 75  ESNLFTTITVTEPAPGVKAIISCKVPDPASGKVELQYLHDYAGISGNIGLKAN------P 128

Query: 60  VLNFXXXXXXXXXXXXANVAFDIPTRTIDKLNAGFNF 96
           V+N              ++++D   R + K N G +F
Sbjct: 129 VVNLSGVFGTNALAFGGDISYDTKLRELTKSNVGVSF 165


>Medtr6g011390.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr6:3211704-3207208 | 20130731
          Length = 278

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 10/99 (10%)

Query: 2   DWNMDLACQVEEIVPGFKSLFKCTIPD----SGKVELRYLNNFIGITGCIGLRGNIERGY 57
           D N+     V E  PG K++    IP+    SGK E++YL+++ GI+  IGL  N     
Sbjct: 74  DSNLFTTITVTEPAPGLKTILSFRIPEPELKSGKAEVQYLHDYAGISASIGLTAN----- 128

Query: 58  DPVLNFXXXXXXXXXXXXANVAFDIPTRTIDKLNAGFNF 96
            PV NF             ++++D  T    +LNAG NF
Sbjct: 129 -PVANFSGVIGNNVVALGGDLSYDTKTGVFTRLNAGLNF 166


>Medtr8g469150.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr8:25095914-25099359 | 20130731
          Length = 276

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 4   NMDLACQVEEIVPGFKSLFKCTIPD--SGKVELRYLNNFIGITGCIGLRGNIERGYDPVL 61
           N+     V+E VPG K++F    P+  SGKVEL+YL+++ GI+  IGL         P +
Sbjct: 76  NLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTSIGLTAT------PTV 129

Query: 62  NFXXXXXXXXXXXXANVAFDIPTRTIDKLNAGFNFKSSFLDA 103
           N             ++V+F+  + +++K N G N   + L A
Sbjct: 130 NISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIA 171


>Medtr8g469150.2 | porin/voltage-dependent anion-selective channel
           protein | HC | chr8:25095983-25099299 | 20130731
          Length = 278

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 4   NMDLACQVEEIVPGFKSLFKCTIPD--SGKVELRYLNNFIGITGCIGLRGNIERGYDPVL 61
           N+     V+E VPG K++F    P+  SGKVEL+YL+++ GI+  IGL         P +
Sbjct: 76  NLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTSIGLTAT------PTV 129

Query: 62  NFXXXXXXXXXXXXANVAFDIPTRTIDKLNAGFNFKSSFLDA 103
           N             ++V+F+  + +++K N G N   + L A
Sbjct: 130 NISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIA 171