Miyakogusa Predicted Gene

Lj4g3v1604510.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1604510.2 Non Characterized Hit- tr|I1MLU6|I1MLU6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45053
PE,74.15,0,seg,NULL; NEUROTR_ION_CHANNEL,Neurotransmitter-gated
ion-channel, conserved site; POP1,Ribonuclease ,CUFF.49544.2
         (849 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g008840.1 | ribonuclease P | HC | chr4:1706291-1713206 | 2...  1161   0.0  

>Medtr4g008840.1 | ribonuclease P | HC | chr4:1706291-1713206 |
           20130731
          Length = 863

 Score = 1161 bits (3003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/852 (67%), Positives = 668/852 (78%), Gaps = 26/852 (3%)

Query: 1   MLTEGTRKPQGSVPI--PPRKINVQKYAKSRAPELLSLQSIVENRLNNNYSSQRNKRRRT 58
           M+T+ T+KP+GS PI  PPRKINV K+A++RA EL SLQ IVENRL+N+Y SQRNKRRRT
Sbjct: 1   MVTDVTKKPKGSAPIAAPPRKINVPKFAEARASELQSLQCIVENRLSNDYKSQRNKRRRT 60

Query: 59  TAFDSQIARKGGNRKRQKLGTVDKAHDESVLEKDQLKKLPRHIRRRYELKMNPENGFCTS 118
           T+F+ QIARKG  RKRQKLG VDKA+ ES L+KD + +LPRH+RRRYELK NPENGFCTS
Sbjct: 61  TSFNDQIARKGHRRKRQKLGRVDKANVESRLKKDDITQLPRHVRRRYELKSNPENGFCTS 120

Query: 119 GDGTKRLRTHVWHAKRFAMTKLWGYNLPLGFQGRGKGSRAVLKRFKEGVLLHDSSYYTAV 178
           G GTKRLRTHVWHAKRF+MTKLW Y+LPLG QGRGKGSRA+L++ K+GVL HD+SYY+AV
Sbjct: 121 GGGTKRLRTHVWHAKRFSMTKLWSYHLPLGLQGRGKGSRALLRKLKQGVLAHDASYYSAV 180

Query: 179 QLEGPEDSLVSVLRMVLLPS-LETETPGNHDFSVLSGITYGTAMLYQVGAPVSQPIAPVT 237
           QLEGPEDSL+S+LR VL+PS +E   P NHD SVLSG TYGTAML+QVGAPVSQ IAPVT
Sbjct: 181 QLEGPEDSLISILRTVLVPSPIEVTHPRNHDDSVLSGTTYGTAMLHQVGAPVSQAIAPVT 240

Query: 238 YIWRPTFPQNTSTELDGRNHHTSLSQHDINDNLSNHDADLCEKSDVMKCGSSFRHIWVWI 297
           Y+WRP F +N             ++   ++D     D DLC+KS+ M C SSFRH+WVWI
Sbjct: 241 YMWRPAFQEN-------------ITDLGVSDEKIILDVDLCDKSERMDCSSSFRHLWVWI 287

Query: 298 HASAFEEGYDSLKFACQKEMEKSGVLINCLSLEGQLGKLELMGSQTFNLLQKILHPVSSI 357
           HASAFEEGY +LK ACQKE+EK G+ INC SLEGQL KLEL+GS TF LLQKILHPV SI
Sbjct: 288 HASAFEEGYANLKLACQKELEKRGISINCSSLEGQLAKLELIGSGTFRLLQKILHPVRSI 347

Query: 358 SENHWQLKKHVAIEEDSVSPSIKSSILKSEEHFSSHAMLSLNVTDPRELLGKRTITPTEP 417
           SENHWQL+KHV  EE+ VS + + SILK+EEHFS  AMLSL V DPR+L  K+T+ P EP
Sbjct: 348 SENHWQLRKHVTTEENHVSQNTEPSILKNEEHFSCRAMLSLTVKDPRDLPVKKTVVPIEP 407

Query: 418 ISTEARSDAQETNNNELANLGGKFENNKGLSSLSWSKLVDSQSNVDDLWDASTTGLRPPV 477
           IST+A SDAQET+  ELA+LGG  E NK           D+QS+VDDLW A+T GL+PPV
Sbjct: 408 ISTKALSDAQETSCKELADLGGMLEKNKDFG--------DNQSDVDDLWYATTRGLKPPV 459

Query: 478 EDSVLAKEKHCERMVNFCLDDIESGEANSSTKVRCSRSCPIVLLKNDMKDLSIGWSIILP 537
           EDSVL+ EKH +RMV FCLDD+  GEANSS KV+CSRSCPI+LLKND+K+ ++GWSIILP
Sbjct: 460 EDSVLSMEKHRKRMVKFCLDDMNFGEANSS-KVQCSRSCPILLLKNDLKESTMGWSIILP 518

Query: 538 LSWVKAFWIPLISNGAHAIGLREKHWIACEIELPSFPSDFPDCKAYSCQMAAKDAVFNKK 597
           LSWVKAFWIPL+SNGAHAIGLREK WIA +  +P FP DFPDCKAYS  MAAK A  ++K
Sbjct: 519 LSWVKAFWIPLVSNGAHAIGLREKQWIASDTGIPFFPQDFPDCKAYSRFMAAKAAECDQK 578

Query: 598 EELRPPSVRRFKVPILPPWGIVRTTFNKEISAMXXXXXXXXXXXXXANSLPISFSGSSKI 657
           EEL PPSVR  +VPILPPW IV  TFNKEIS M             ANSL  S  G+SKI
Sbjct: 579 EELCPPSVRNLRVPILPPWRIVHNTFNKEISNMETLDLSAREDLTNANSLSNSCPGNSKI 638

Query: 658 SNFNCMNNSFDGTIARTGNMLTTFINETKAGQLLLFPHVAEGKDIISKFIKGEQNLDLMH 717
           SNF+   N+FDGT+ARTG MLTT ++ETK G+LLLFP+ A+GK  ISKFIKGE  LD  H
Sbjct: 639 SNFDS-ENAFDGTVARTGCMLTTLLDETKTGRLLLFPYAADGKARISKFIKGEIMLDTRH 697

Query: 718 KSSVIYDHKLCFLRVILHPFKEGVFKEGAVICAPCLSDISMWTXXXXXXXXXXXXXXXAM 777
           KSS+IYD KL F+RV L PFKEG F+EGAVICAP  SDIS+WT               AM
Sbjct: 698 KSSIIYDRKLYFIRVHLQPFKEGFFEEGAVICAPHPSDISLWTLSSVKSEVGLKLSESAM 757

Query: 778 KLYFKEHSSGKWGMQIPEDSIARASHRWPIGFVTTASVQGSKRLVAEGFCEAVLLSHLRE 837
           + YFKE+SSG+WGMQIP+DS+ R SHRWPIGFVT+A VQGSKRL AEGFCEAVLLSHLRE
Sbjct: 758 RSYFKENSSGEWGMQIPDDSVGRESHRWPIGFVTSACVQGSKRLAAEGFCEAVLLSHLRE 817

Query: 838 EQWKEMPVKQRR 849
           EQWKEMPV QRR
Sbjct: 818 EQWKEMPVNQRR 829