Miyakogusa Predicted Gene
- Lj4g3v1600400.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1600400.1 Non Characterized Hit- tr|I0YRN8|I0YRN8_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,41.18,8e-17,Wbp11,WW domain binding protein 11; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.49462.1
(533 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g107410.1 | WW domain-binding protein | HC | chr4:44431431... 389 e-108
Medtr4g107420.1 | WW domain-binding protein | HC | chr4:44441978... 211 1e-54
Medtr4g107420.2 | WW domain-binding protein | HC | chr4:44441937... 210 3e-54
Medtr4g107420.3 | WW domain-binding protein | HC | chr4:44441937... 209 4e-54
Medtr4g107420.5 | WW domain-binding protein | HC | chr4:44441311... 209 4e-54
Medtr4g107420.4 | WW domain-binding protein | HC | chr4:44441978... 209 4e-54
Medtr0444s0010.1 | WW domain-binding protein | HC | scaffold0444... 114 2e-25
Medtr0444s0010.3 | WW domain-binding protein | HC | scaffold0444... 67 4e-11
Medtr0444s0010.2 | WW domain-binding protein | HC | scaffold0444... 62 1e-09
>Medtr4g107410.1 | WW domain-binding protein | HC |
chr4:44431431-44416447 | 20130731
Length = 543
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/542 (46%), Positives = 278/542 (51%), Gaps = 18/542 (3%)
Query: 1 MNPTDAYXXXXXXXXXXXXXXXXXXXXXXGILKKDPEQLKKQIDNLEMMKADGALDKARK 60
MNPTDAY GILKKDP+QLKKQI+NLEMMKADGALDKARK
Sbjct: 11 MNPTDAYRKELRKKELKRNKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARK 70
Query: 61 HKKRQLQDTLNLDVKKRREYEDKMKEKGETPVMFSHLGPPXXXXXXXXXXXVNHPKPEDS 120
HKKRQL+DTLN +KK++EY++K +EKGE PVMFSHLG P VNHP+PEDS
Sbjct: 71 HKKRQLEDTLNRVIKKQKEYDEKKREKGEAPVMFSHLGLPQRRTSAEEEDRVNHPQPEDS 130
Query: 121 VYYHPTLNXXXXXXXXXXXMFVSSIGPRIPLSGXXXXXXXXXXXTESENDVLAVXXXXXX 180
VYYHP LN M+ S IGPRIPL G TES++ VLAV
Sbjct: 131 VYYHPQLNPTGAPPPGKPPMYHSPIGPRIPLFGASSSTAASSSATESDDCVLAVPPPPPP 190
Query: 181 XXXXDSGTASSADGAVXXXXXXXXXXXXXXXXXXXXXXTSXXXXXXXXXXXXXXXKDQIA 240
+ ASSADGAV S K+Q
Sbjct: 191 PPLPE---ASSADGAVLPASLPLPPPPPMPPNPTTVVPASLPPPPLPPPPPGPPPKEQAV 247
Query: 241 SRXXXXXXXXXXXXXXXXXGTGVGMERNQSALTDDLPFKAPGQVQLXXXXXX-----XKS 295
+R GT G ERNQ AL D+L K PGQVQL S
Sbjct: 248 NRPLPPPPPPLKHSQPPPPGTSEGEERNQYALPDNLSSKEPGQVQLPPPPPPPSHMPQNS 307
Query: 296 GVIQSDGAAASTDNKNTLSSQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXX 355
G IQSDGA STDN+N+LS+QEI KM IPS+Q DVL
Sbjct: 308 GAIQSDGAVVSTDNRNSLSNQEIQKM--VPGPPPPRQQPPGPGLTLIPSVQPDVL----P 361
Query: 356 XXXXXXXXXXXXXXXXXXXVAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXX 415
V GLPGQA PPGMMVPLI R
Sbjct: 362 PGISRFPPPPPSDMRPPLPVIGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMTRPPLPPGP 421
Query: 416 XXNFHEEDHLALRQLPPQKPSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIK 475
NF EEDH+A R LPPQKPSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE AM K
Sbjct: 422 PPNFQEEDHMATRPLPPQKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTK 481
Query: 476 TKPKP----SLPTTSRTVSGKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGAL 531
TKPKP +TSR VS GPT IDDSY+AFLEDMKALGAL
Sbjct: 482 TKPKPSLSTVSVSTSRAVSVTPGPTILKAESVSSSSAPKAPSIDDSYTAFLEDMKALGAL 541
Query: 532 DG 533
DG
Sbjct: 542 DG 543
>Medtr4g107420.1 | WW domain-binding protein | HC |
chr4:44441978-44435656 | 20130731
Length = 479
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXXX-----KSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQV L SG IQSDG TDNKN S
Sbjct: 206 GTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDG----TDNKNYYS 261
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXXXXXXXXXXXXXXXXXXXXX 374
+QEI K+ IPSLQ DVL
Sbjct: 262 NQEIQKLFPGPPPPRQQPPGPGPSL--IPSLQPDVLPPGISRFPPPPPPPDMRPPLP--- 316
Query: 375 VAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXXXXNFHEEDHLALRQLPPQK 434
V GLPGQA PPGMMVPLI R NF EEDH+A + LPPQK
Sbjct: 317 VTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQK 376
Query: 435 PSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPT----TSRTVS 490
PSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE A+ KTKPKP + T TSRTV
Sbjct: 377 PSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVP 436
Query: 491 GKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
GPT IDDSY+AFLEDMKALGALDG
Sbjct: 437 VTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG 479
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 74/113 (65%)
Query: 1 MNPTDAYXXXXXXXXXXXXXXXXXXXXXXGILKKDPEQLKKQIDNLEMMKADGALDKARK 60
MNPTDAY GILKKDP+QLKKQI+NLEMMKADGALDKARK
Sbjct: 11 MNPTDAYRKELRKKELKRNKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARK 70
Query: 61 HKKRQLQDTLNLDVKKRREYEDKMKEKGETPVMFSHLGPPXXXXXXXXXXXVN 113
HK +QL+ TL+L +KK++E+++K +EKGE VMFSHLGPP VN
Sbjct: 71 HKSKQLKQTLDLVIKKQKEHDEKRREKGEPLVMFSHLGPPQRRTIVEEEEIVN 123
>Medtr4g107420.2 | WW domain-binding protein | HC |
chr4:44441937-44435656 | 20130731
Length = 402
Score = 210 bits (535), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXXX-----KSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQV L SG IQSDG TDNKN S
Sbjct: 129 GTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDG----TDNKNYYS 184
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXXXXXXXXXXXXXXXXXXXXX 374
+QEI K+ IPSLQ DVL
Sbjct: 185 NQEIQKLFPGPPPPRQQPPGPGPSL--IPSLQPDVLPPGISRFPPPPPPPDMRPPLP--- 239
Query: 375 VAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXXXXNFHEEDHLALRQLPPQK 434
V GLPGQA PPGMMVPLI R NF EEDH+A + LPPQK
Sbjct: 240 VTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQK 299
Query: 435 PSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPT----TSRTVS 490
PSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE A+ KTKPKP + T TSRTV
Sbjct: 300 PSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVP 359
Query: 491 GKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
GPT IDDSY+AFLEDMKALGALDG
Sbjct: 360 VTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG 402
>Medtr4g107420.3 | WW domain-binding protein | HC |
chr4:44441937-44435656 | 20130731
Length = 408
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXXX-----KSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQV L SG IQSDG TDNKN S
Sbjct: 135 GTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDG----TDNKNYYS 190
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXXXXXXXXXXXXXXXXXXXXX 374
+QEI K+ IPSLQ DVL
Sbjct: 191 NQEIQKLFPGPPPPRQQPPGPGPSL--IPSLQPDVLPPGISRFPPPPPPPDMRPPLP--- 245
Query: 375 VAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXXXXNFHEEDHLALRQLPPQK 434
V GLPGQA PPGMMVPLI R NF EEDH+A + LPPQK
Sbjct: 246 VTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQK 305
Query: 435 PSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPT----TSRTVS 490
PSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE A+ KTKPKP + T TSRTV
Sbjct: 306 PSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVP 365
Query: 491 GKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
GPT IDDSY+AFLEDMKALGALDG
Sbjct: 366 VTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG 408
>Medtr4g107420.5 | WW domain-binding protein | HC |
chr4:44441311-44435656 | 20130731
Length = 408
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXXX-----KSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQV L SG IQSDG TDNKN S
Sbjct: 135 GTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDG----TDNKNYYS 190
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXXXXXXXXXXXXXXXXXXXXX 374
+QEI K+ IPSLQ DVL
Sbjct: 191 NQEIQKLFPGPPPPRQQPPGPGPSL--IPSLQPDVLPPGISRFPPPPPPPDMRPPLP--- 245
Query: 375 VAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXXXXNFHEEDHLALRQLPPQK 434
V GLPGQA PPGMMVPLI R NF EEDH+A + LPPQK
Sbjct: 246 VTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQK 305
Query: 435 PSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPT----TSRTVS 490
PSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE A+ KTKPKP + T TSRTV
Sbjct: 306 PSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVP 365
Query: 491 GKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
GPT IDDSY+AFLEDMKALGALDG
Sbjct: 366 VTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG 408
>Medtr4g107420.4 | WW domain-binding protein | HC |
chr4:44441978-44435656 | 20130731
Length = 408
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/283 (49%), Positives = 150/283 (53%), Gaps = 18/283 (6%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXXX-----KSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQV L SG IQSDG TDNKN S
Sbjct: 135 GTSEGEERNQYALPDNLSSKEPGQVHLPPPPPPPSCMPPNSGAIQSDG----TDNKNYYS 190
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVLXXXXXXXXXXXXXXXXXXXXXXXX 374
+QEI K+ IPSLQ DVL
Sbjct: 191 NQEIQKLFPGPPPPRQQPPGPGPSL--IPSLQPDVLPPGISRFPPPPPPPDMRPPLP--- 245
Query: 375 VAGLPGQALPPGMMVPLIHRXXXXXXXXXXXXXXXXXXXXXXXNFHEEDHLALRQLPPQK 434
V GLPGQA PPGMMVPLI R NF EEDH+A + LPPQK
Sbjct: 246 VTGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMASKALPPQK 305
Query: 435 PSYVKSAASTVVKRPLAQHTPELTAMIPASVRVRREAAMIKTKPKPSLPT----TSRTVS 490
PSYVKSAASTVVKRPLAQHTPELT+M+PASVRVRRE A+ KTKPKP + T TSRTV
Sbjct: 306 PSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAVTKTKPKPLVSTVSVATSRTVP 365
Query: 491 GKSGPTNXXXXXXXXXXXXXXXXIDDSYSAFLEDMKALGALDG 533
GPT IDDSY+AFLEDMKALGALDG
Sbjct: 366 VTLGPTIVKPESVSSSSSPKAPSIDDSYTAFLEDMKALGALDG 408
>Medtr0444s0010.1 | WW domain-binding protein | HC |
scaffold0444:6551-2114 | 20130731
Length = 334
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 74/123 (60%), Gaps = 10/123 (8%)
Query: 1 MNPTDAYXXXXXXXXXXXXXXXXXXXXXXGILKKDPEQLKKQIDNLEMMKADGALDKARK 60
MNPTDAY GILKKDP+QLKKQI+NLEMMKADGALDKARK
Sbjct: 11 MNPTDAYRKELRKKELKRNKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARK 70
Query: 61 HKKRQLQDTLNLDVKKRREYEDKMKEKGETPVMF----------SHLGPPXXXXXXXXXX 110
HK +QL+ TL+L +KK++E+++K +EKGE VMF SHLGPP
Sbjct: 71 HKSKQLKQTLDLVIKKQKEHDEKRREKGEPLVMFSLQILGCLLRSHLGPPQRRTIVEEEE 130
Query: 111 XVN 113
VN
Sbjct: 131 IVN 133
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXX-----XKSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQVQL SG IQSDGA STDN+N+LS
Sbjct: 216 GTSEGEERNQYALPDNLSSKEPGQVQLPPPPPPPSHMPQNSGAIQSDGAVVSTDNRNSLS 275
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVL 350
+QEI KM IPS+Q DVL
Sbjct: 276 NQEIQKM--VPGPPPPRQQPPGPGLTLIPSVQPDVL 309
>Medtr0444s0010.3 | WW domain-binding protein | HC |
scaffold0444:6711-2103 | 20130731
Length = 257
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXX-----XKSGVIQSDGAAASTDNKNTLS 314
GT G ERNQ AL D+L K PGQVQL SG IQSDGA STDN+N+LS
Sbjct: 135 GTSEGEERNQYALPDNLSSKEPGQVQLPPPPPPPSHMPQNSGAIQSDGAVVSTDNRNSLS 194
Query: 315 SQEIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVL 350
+QEI KM IPS+Q DVL
Sbjct: 195 NQEIQKM--VPGPPPPRQQPPGPGLTLIPSVQPDVL 228
>Medtr0444s0010.2 | WW domain-binding protein | HC |
scaffold0444:6734-2105 | 20130731
Length = 254
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 260 GTGVGMERNQSALTDDLPFKAPGQVQLXXXXXX---XKSGVIQSDGAAASTDNKNTLSSQ 316
GT G ERNQ AL D+L K PGQ+ SG IQSDGA STDN+N+LS+Q
Sbjct: 135 GTSEGEERNQYALPDNLSSKEPGQLPPPPPPPSHMPQNSGAIQSDGAVVSTDNRNSLSNQ 194
Query: 317 EIPKMXXXXXXXXXXXXXXXXXXXXIPSLQADVL 350
EI KM IPS+Q DVL
Sbjct: 195 EIQKM--VPGPPPPRQQPPGPGLTLIPSVQPDVL 226