Miyakogusa Predicted Gene

Lj4g3v1599320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1599320.1 Non Characterized Hit- tr|G7JCA6|G7JCA6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,35.71,5e-18,FAMILY NOT NAMED,NULL; coiled-coil,NULL;
seg,NULL,CUFF.49460.1
         (457 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107390.1 | aminoacyl-tRNA synthetase | HC | chr4:44406871...   469   e-132
Medtr3g108410.1 | hypothetical protein | HC | chr3:50101068-5010...    93   5e-19

>Medtr4g107390.1 | aminoacyl-tRNA synthetase | HC |
           chr4:44406871-44399957 | 20130731
          Length = 755

 Score =  469 bits (1207), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 286/481 (59%), Positives = 317/481 (65%), Gaps = 35/481 (7%)

Query: 1   MIGHRLYREIRKTEVVQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRT 60
           +IGHRLYREIRKTEV+Q +KG+ARGSQVLS+TSYQWEAVATNFDEFQDVSEKLFSSKNRT
Sbjct: 286 VIGHRLYREIRKTEVIQPRKGRARGSQVLSNTSYQWEAVATNFDEFQDVSEKLFSSKNRT 345

Query: 61  EALVGKKLKIDMLPEIEXXXXXXXXXXXXXXXXXXXXDNYLVMDGFGPGRSLRDRKSVTY 120
           E  VGKKLKIDMLPEIE                    DNYLV DG   GR+LRDRK VTY
Sbjct: 346 ETSVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYLVTDGLSAGRALRDRKHVTY 405

Query: 121 TFDDYDRSISEAIKVTKQKQPSPEPMRRRESVAKTEALTNGNHGPSHVAAQHLNFGMXXX 180
           TFDDYDRSI+EAIKVTK+KQ SPEPM RRE VAK +A TNGNHGPSH AAQH NFG+   
Sbjct: 406 TFDDYDRSINEAIKVTKRKQTSPEPMPRREPVAKPDAQTNGNHGPSH-AAQHQNFGISST 464

Query: 181 XX---XXXXXXXXXXHKTDAXXXXXXXXXPKRYSENDSIEEGPGNEAGFDSDDDIVGEVV 237
                          +  +          PKRYSEN+ +EE    E  FDSDDDIVGE V
Sbjct: 465 ESPGSDSDSDSDEYDNTDNLDRSGRRRTKPKRYSENEFVEEVSDYEPEFDSDDDIVGEAV 524

Query: 238 YDEEYLKKRKQRRDIXXXXXXXXXXXXXXXXXXYNLXXXXXXXXXXXXXXXXXXXXXXXX 297
           YDEEYLKKRKQRR                    ++                         
Sbjct: 525 YDEEYLKKRKQRR-------KHSSSSEGDEEDEWDDDNIEDEEEEEDDEEDSGSISEDSD 577

Query: 298 KPRKVKQLPGRTRRETKRRSVDEIQSGLRRSKRATRNTINYQQYELSESETEVTKPEKSD 357
           KPRKVK+LPGRTRRETKRRSV EIQS  RRS+RATRN I+Y+QYE+S+SETE TK +KS+
Sbjct: 578 KPRKVKRLPGRTRRETKRRSVGEIQSSPRRSRRATRNRIDYRQYEMSDSETEFTKLKKSN 637

Query: 358 ASGDHSDPS------------------ENGEYMSESEGSGN--DGEDHEMKVDEPVTFPA 397
           AS +HSDPS                  ENGEY+ ESE S +  DG DHEMKVDEPV  P 
Sbjct: 638 ASANHSDPSENEIENDNENENENDNENENGEYVMESEDSDSIEDG-DHEMKVDEPVGAPD 696

Query: 398 VE-EENELNQPAAEKLSSPGQEEAEGMGKRRFLDLNELAPSPGFDDGPIPDTIMKDEDND 456
            + EENE NQP  +  S PGQ+E EG GKRRFLDLNELAPSPGFDDG  P+TIMKDEDND
Sbjct: 697 TKVEENEQNQPPEKSSSPPGQDEVEGTGKRRFLDLNELAPSPGFDDG--PNTIMKDEDND 754

Query: 457 Y 457
           Y
Sbjct: 755 Y 755


>Medtr3g108410.1 | hypothetical protein | HC |
           chr3:50101068-50105833 | 20130731
          Length = 458

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 4   HRLYREIRKTEVVQMKKGKARGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTEAL 63
           HRLYRE   +     +KGK      LS  ++QWE +ATN DEF +V+EKL SSK+R E  
Sbjct: 192 HRLYRETITSVSTPNRKGKG----CLSLPNFQWETLATNLDEFSEVAEKLSSSKSRVEIY 247

Query: 64  VGKKLKIDMLPEIEXXXXXXXXXXXXXXXXXXXXDNYLVMDGFGPGRSLRDRKSVTYTFD 123
           +G +L+ D +P +E                     ++      G  RS R R+ + Y+F+
Sbjct: 248 MGDRLQSDAIPVLEKLQKKKERAMKQKERQDKLLKDFQNSFSSGNTRSCRTRRPINYSFE 307

Query: 124 DYDRSISEAIKVTKQKQPSP 143
            YDR+I EAI++T +++ SP
Sbjct: 308 AYDRTIKEAIQLTNKRKKSP 327