Miyakogusa Predicted Gene

Lj4g3v1586930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1586930.1 tr|B9IEJ7|B9IEJ7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_776013 PE=4
SV=1,40.8,0.0000000000003, ,CUFF.49432.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g107270.1 | hypothetical protein | HC | chr4:44314617-4431...   178   2e-45

>Medtr4g107270.1 | hypothetical protein | HC |
           chr4:44314617-44313828 | 20130731
          Length = 140

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/135 (72%), Positives = 110/135 (81%), Gaps = 4/135 (2%)

Query: 6   KSKSEMSLCEKSMEVVVNVIRLSTFSIAKRTLG--ATTRSKSGKDLSGSDFSDMEPEKEH 63
           KSK+E SLCEKSM+VVVNVIRLS+FSIA+RTLG  A+T  KS KD   SD S+ EP KE 
Sbjct: 7   KSKNEESLCEKSMKVVVNVIRLSSFSIAQRTLGVGASTTRKSRKDKDLSD-SEKEPMKEK 65

Query: 64  QQVPDQFPAS-KRSQQPQSRANPTYVIKSVGSNGSTGYVIHEERVHKVSPKKDQCVDGLA 122
                QFPAS +RSQQPQSRANPTYVIKSVGSN ST Y+IH+ER+H V+P K+ CVDGLA
Sbjct: 66  LVSNKQFPASSRRSQQPQSRANPTYVIKSVGSNRSTEYLIHKERLHDVNPNKELCVDGLA 125

Query: 123 SDYISKIRNKLGRGL 137
           SDYISKIRNKLGR L
Sbjct: 126 SDYISKIRNKLGRSL 140