Miyakogusa Predicted Gene
- Lj4g3v1539370.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1539370.2 Non Characterized Hit- tr|I1GZF5|I1GZF5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,39.47,0.000000000002,Glucocorticoid receptor-like (DNA-binding
domain),NULL; LIM,Zinc finger, LIM-type; SUBFAMILY NOT
NAM,CUFF.49380.2
(191 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g106800.1 | GATA type zinc finger transcription factor fam... 332 2e-91
Medtr1g017950.1 | GATA type zinc finger transcription factor fam... 257 4e-69
Medtr1g017950.2 | GATA type zinc finger transcription factor fam... 257 4e-69
Medtr3g070050.2 | GATA type zinc finger transcription factor fam... 218 3e-57
Medtr3g070050.1 | GATA type zinc finger transcription factor fam... 218 3e-57
Medtr8g097300.1 | GATA type zinc finger transcription factor fam... 191 4e-49
Medtr8g031490.1 | GATA type zinc finger transcription factor fam... 187 6e-48
Medtr7g076720.1 | GATA type zinc finger transcription factor fam... 184 6e-47
Medtr3g070050.3 | GATA type zinc finger transcription factor fam... 153 1e-37
Medtr1g106100.1 | GATA type zinc finger transcription factor fam... 111 4e-25
Medtr3g070033.1 | GATA type zinc finger transcription factor fam... 81 6e-16
>Medtr4g106800.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:44086910-44085000 | 20130731
Length = 181
Score = 332 bits (850), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 155/181 (85%), Positives = 167/181 (92%)
Query: 1 MASFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCK 60
MASFAGT QKC CEKKVYWVEQLTADNKV+HKSCFRCHHCKGTLKLSNYCSFE VLYCK
Sbjct: 1 MASFAGTAQKCNTCEKKVYWVEQLTADNKVFHKSCFRCHHCKGTLKLSNYCSFESVLYCK 60
Query: 61 PHFHQLLKMTGSLDKSFEGVARIARVERSSDQVQTNSKISKLFSGTQEKCVGCKKTVYPI 120
PHF QL KMTGSL KSFEG+ RI RVERS+DQVQ +K+S+ F+GTQEKCVGCKKTVYPI
Sbjct: 61 PHFDQLFKMTGSLYKSFEGITRIYRVERSTDQVQAYNKVSRFFAGTQEKCVGCKKTVYPI 120
Query: 121 EKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDKPEI 180
EKVAVDG+SYHK+CF+CTHGGC+ISPSNYVAHEHRLYCRHHHTQ+FKQKGNFSQFDK E
Sbjct: 121 EKVAVDGESYHKNCFRCTHGGCIISPSNYVAHEHRLYCRHHHTQIFKQKGNFSQFDKIEQ 180
Query: 181 V 181
V
Sbjct: 181 V 181
>Medtr1g017950.1 | GATA type zinc finger transcription factor family
protein | HC | chr1:5125381-5123274 | 20130731
Length = 195
Score = 257 bits (657), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
+FAGTTQKC C K VY V++LTADN+++HK+CFRCHHCKGTLKLSNY SFEGVLYC+PH
Sbjct: 2 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
Query: 63 FHQLLKMTGSLDKSFEGVARIARVERSSDQVQ-TNSKISKLFSGTQEKCVGCKKTVYPIE 121
F QL K TGSL+KSFEG +I + ER+ D + +K S +F GT++KC GC+KTVYP E
Sbjct: 62 FDQLFKRTGSLEKSFEGTPKIVKPERNIDNEKPAAAKASSMFGGTRDKCSGCQKTVYPTE 121
Query: 122 KVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFD 176
KV V+G YHKSCFKC HGGC ISPSNY+AHE +LYC+HHH QL KQKGN SQ +
Sbjct: 122 KVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKQKGNLSQLE 176
>Medtr1g017950.2 | GATA type zinc finger transcription factor family
protein | HC | chr1:5125455-5123274 | 20130731
Length = 195
Score = 257 bits (657), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 141/175 (80%), Gaps = 1/175 (0%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
+FAGTTQKC C K VY V++LTADN+++HK+CFRCHHCKGTLKLSNY SFEGVLYC+PH
Sbjct: 2 AFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
Query: 63 FHQLLKMTGSLDKSFEGVARIARVERSSDQVQ-TNSKISKLFSGTQEKCVGCKKTVYPIE 121
F QL K TGSL+KSFEG +I + ER+ D + +K S +F GT++KC GC+KTVYP E
Sbjct: 62 FDQLFKRTGSLEKSFEGTPKIVKPERNIDNEKPAAAKASSMFGGTRDKCSGCQKTVYPTE 121
Query: 122 KVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFD 176
KV V+G YHKSCFKC HGGC ISPSNY+AHE +LYC+HHH QL KQKGN SQ +
Sbjct: 122 KVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKQKGNLSQLE 176
>Medtr3g070050.2 | GATA type zinc finger transcription factor family
protein | HC | chr3:31366370-31362368 | 20130731
Length = 191
Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 134/189 (70%), Gaps = 3/189 (1%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
SF GT QKCK CEK VY V+QL+AD YHK+CFRC HCKGTLKLS+Y S EGVLYCKPH
Sbjct: 2 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 61
Query: 63 FHQLLKMTGSL--DKSFEGVARIARVERSSDQVQTNSKISKLFSGTQEKCVGCKKTVYPI 120
F QL K G+ +K+F+ A++A + +T SK + +FSGTQEKC C KT YP+
Sbjct: 62 FEQLFKEHGNFSKNKNFQSPAKVAD-GTTPVLTRTPSKAAGMFSGTQEKCATCGKTAYPL 120
Query: 121 EKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDKPEI 180
EKV V+ ++YHKSCFKC+HGGC I+PSNY A E LYC+HH +QLFK+KG+++ K
Sbjct: 121 EKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 180
Query: 181 VQEITEDTP 189
++ P
Sbjct: 181 IKRAAASVP 189
>Medtr3g070050.1 | GATA type zinc finger transcription factor family
protein | HC | chr3:31366370-31362368 | 20130731
Length = 191
Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 134/189 (70%), Gaps = 3/189 (1%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
SF GT QKCK CEK VY V+QL+AD YHK+CFRC HCKGTLKLS+Y S EGVLYCKPH
Sbjct: 2 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKPH 61
Query: 63 FHQLLKMTGSL--DKSFEGVARIARVERSSDQVQTNSKISKLFSGTQEKCVGCKKTVYPI 120
F QL K G+ +K+F+ A++A + +T SK + +FSGTQEKC C KT YP+
Sbjct: 62 FEQLFKEHGNFSKNKNFQSPAKVAD-GTTPVLTRTPSKAAGMFSGTQEKCATCGKTAYPL 120
Query: 121 EKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDKPEI 180
EKV V+ ++YHKSCFKC+HGGC I+PSNY A E LYC+HH +QLFK+KG+++ K
Sbjct: 121 EKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 180
Query: 181 VQEITEDTP 189
++ P
Sbjct: 181 IKRAAASVP 189
>Medtr8g097300.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:40763311-40761680 | 20130731
Length = 211
Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 124/184 (67%), Gaps = 7/184 (3%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
SF GT QKCKVC+K V+ V+ L+AD V+HK+CFRC+ C G L +SNY S EGVLYCK H
Sbjct: 2 SFTGTQQKCKVCDKTVHLVDTLSADGNVFHKNCFRCNQCNGLLAMSNYQSIEGVLYCKTH 61
Query: 63 FHQLLKMTGSLDKSFEGVARIARVERSSDQVQTNSKISKLFSGTQEKCVGCKKTVYPIEK 122
QL K SF + + S+ + SK+S FSGTQ+KC CKKTVYP+EK
Sbjct: 62 AEQLFK------DSF-AAKKPQTAGKPSELPRAPSKLSAFFSGTQDKCSSCKKTVYPLEK 114
Query: 123 VAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDKPEIVQ 182
+ V+G+ YHKSCF+CTHGGC +SPS+Y A + +YC+ H +QLFK KG++S K ++
Sbjct: 115 LTVEGEFYHKSCFRCTHGGCFLSPSSYAALDGFIYCKPHFSQLFKAKGSYSYLSKQASIK 174
Query: 183 EITE 186
+ E
Sbjct: 175 KNEE 178
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%)
Query: 2 ASFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKP 61
A F+GT KC C+K VY +E+LT + + YHKSCFRC H L S+Y + +G +YCKP
Sbjct: 93 AFFSGTQDKCSSCKKTVYPLEKLTVEGEFYHKSCFRCTHGGCFLSPSSYAALDGFIYCKP 152
Query: 62 HFHQLLKMTGS 72
HF QL K GS
Sbjct: 153 HFSQLFKAKGS 163
>Medtr8g031490.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:11821023-11822649 | 20130731
Length = 205
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 120/175 (68%), Gaps = 5/175 (2%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
SF GT KCK C+K VY V+ LT +N YHKSCF+C HCKG L +S Y S +G+LYCK H
Sbjct: 2 SFTGTLDKCKACDKTVYVVDLLTLENIPYHKSCFKCSHCKGNLTMSTYSSMDGILYCKTH 61
Query: 63 FHQLLKMTGSLDKSFEGVARIARVERSSDQVQTNSKISKLFSGTQEKCVGCKKTVYPIEK 122
F QL K +G+ K+F + +++++ +T S++S +FSGT +KC C KTVYP+EK
Sbjct: 62 FEQLFKESGNFSKNFAKSS-----DKANELNRTPSRLSSMFSGTLDKCATCSKTVYPLEK 116
Query: 123 VAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDK 177
V ++G+ YHK+CF+C H GC ++ SNY A + LYCR H QLF +KGN+S K
Sbjct: 117 VTLEGEIYHKTCFRCAHAGCPLTHSNYAALDGVLYCRVHFAQLFMEKGNYSHVLK 171
>Medtr7g076720.1 | GATA type zinc finger transcription factor family
protein | HC | chr7:28939319-28937779 | 20130731
Length = 212
Score = 184 bits (466), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 122/176 (69%), Gaps = 13/176 (7%)
Query: 3 SFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPH 62
SF GT KCK C+K VY V+ LT + YHKSC +C HCKG L +S Y S +GVLYCKPH
Sbjct: 2 SFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKPH 61
Query: 63 FHQLLKMTGSLDKSFEGVARIARVERSSDQV-----QTNSKISKLFSGTQEKCVGCKKTV 117
F QL K +G+ K+F+ +SS+++ +T S++S +FSGT +KC C KTV
Sbjct: 62 FEQLFKESGNFSKNFQA--------KSSEKINELMNRTPSRLSSMFSGTLDKCAVCTKTV 113
Query: 118 YPIEKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFS 173
YP+EK++++G+ YHK+CF+C HGGC ++ S+Y A + LYC+HH QLF +KGN++
Sbjct: 114 YPLEKMSLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFQQLFMEKGNYN 169
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 103 FSGTQEKCVGCKKTVYPIEKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHH 162
F+GT +KC C KTVY ++ + ++G YHKSC KCTH ++ S Y + + LYC+ H
Sbjct: 3 FTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKPHF 62
Query: 163 TQLFKQKGNFS---QFDKPEIVQEITEDTPS 190
QLFK+ GNFS Q E + E+ TPS
Sbjct: 63 EQLFKESGNFSKNFQAKSSEKINELMNRTPS 93
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 4 FAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPHF 63
F+GT KC VC K VY +E+++ + + YHK+CFRC H L S+Y + +GVLYCK HF
Sbjct: 99 FSGTLDKCAVCTKTVYPLEKMSLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHF 158
Query: 64 HQLLKMTGSLDKSFEGVAR 82
QL G+ + + A
Sbjct: 159 QQLFMEKGNYNHVLQAAAN 177
>Medtr3g070050.3 | GATA type zinc finger transcription factor family
protein | HC | chr3:31365483-31362457 | 20130731
Length = 149
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 100/147 (68%), Gaps = 3/147 (2%)
Query: 45 LKLSNYCSFEGVLYCKPHFHQLLKMTGSL--DKSFEGVARIARVERSSDQVQTNSKISKL 102
+LS+Y S EGVLYCKPHF QL K G+ +K+F+ A++A + +T SK + +
Sbjct: 2 FQLSSYSSMEGVLYCKPHFEQLFKEHGNFSKNKNFQSPAKVAD-GTTPVLTRTPSKAAGM 60
Query: 103 FSGTQEKCVGCKKTVYPIEKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHH 162
FSGTQEKC C KT YP+EKV V+ ++YHKSCFKC+HGGC I+PSNY A E LYC+HH
Sbjct: 61 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 120
Query: 163 TQLFKQKGNFSQFDKPEIVQEITEDTP 189
+QLFK+KG+++ K ++ P
Sbjct: 121 SQLFKEKGSYNHLIKSASIKRAAASVP 147
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 4 FAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPHF 63
F+GT +KC C K Y +E++T +++ YHKSCF+C H + SNY + EG+LYCK HF
Sbjct: 61 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 120
Query: 64 HQLLKMTGSLDKSFEGVARIARVERSSDQV 93
QL K GS + + + A ++R++ V
Sbjct: 121 SQLFKEKGSYNH----LIKSASIKRAAASV 146
>Medtr1g106100.1 | GATA type zinc finger transcription factor family
protein | LC | chr1:48032132-48031113 | 20130731
Length = 154
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 77/113 (68%), Gaps = 11/113 (9%)
Query: 60 KPHFHQLLKMTGSLDK--SFEGVARIARVERSSDQVQTNSKI--SKLFSGTQEKCVGCKK 115
+PH+ QL K TGSLDK + + + + E+ N+KI + F Q++C+ CKK
Sbjct: 20 RPHYDQLCKRTGSLDKLKALKSLTNLILNEQ-------NAKILANAFFLRQQKQCMCCKK 72
Query: 116 TVYPIEKVAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQ 168
TVYP E+V V+G YH+ CFKCT+GGC IS SN+V+HE +LYC+HHH QLFK+
Sbjct: 73 TVYPTERVTVNGTLYHRGCFKCTYGGCTISSSNFVSHETKLYCKHHHIQLFKE 125
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 2 ASFAGTTQKCKVCEKKVYWVEQLTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKP 61
A F ++C C+K VY E++T + +YH+ CF+C + T+ SN+ S E LYCK
Sbjct: 58 AFFLRQQKQCMCCKKTVYPTERVTVNGTLYHRGCFKCTYGGCTISSSNFVSHETKLYCKH 117
Query: 62 HFHQLLK 68
H QL K
Sbjct: 118 HHIQLFK 124
>Medtr3g070033.1 | GATA type zinc finger transcription factor family
protein | HC | chr3:31353097-31352086 | 20130731
Length = 74
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 123 VAVDGKSYHKSCFKCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQFDKPEIVQ 182
V V+ ++YHKSCFKC+HGGC I+PSNY A E LYC+HH +QLFK+KG+++ K ++
Sbjct: 6 VTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIK 65
Query: 183 EITEDTP 189
P
Sbjct: 66 RAAASVP 72
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 24 LTADNKVYHKSCFRCHHCKGTLKLSNYCSFEGVLYCKPHFHQLLKMTGSLDKSFEGVARI 83
+T +++ YHKSCF+C H + SNY + EG+LYCK HF QL K G S+ + +
Sbjct: 6 VTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKG----SYNHLIKS 61
Query: 84 ARVERSSDQV 93
A ++R++ V
Sbjct: 62 ASIKRAAASV 71