Miyakogusa Predicted Gene

Lj4g3v1539340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1539340.1 tr|Q9FJW1|Q9FJW1_ARATH At5g67620 OS=Arabidopsis
thaliana GN=At5g67620 PE=2 SV=1,33.67,4e-19,seg,NULL; DUF4228,Protein
of unknown function DUF4228,CUFF.49382.1
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106790.1 | DUF4228 domain protein | HC | chr4:44080648-44...   247   4e-66
Medtr4g106790.2 | DUF4228 domain protein | HC | chr4:44080648-44...   214   3e-56
Medtr3g078300.1 | DUF4228 domain protein | HC | chr3:35276942-35...   186   1e-47
Medtr3g078300.2 | DUF4228 domain protein | HC | chr3:35276942-35...   164   3e-41
Medtr5g035430.1 | DUF4228 domain protein | HC | chr5:15407370-15...   137   6e-33
Medtr4g097220.1 | DUF4228 domain protein | HC | chr4:40063713-40...   120   6e-28
Medtr8g063200.1 | DUF4228 domain protein | HC | chr8:26461240-26...   115   2e-26
Medtr4g097220.2 | DUF4228 domain protein | HC | chr4:40063713-40...   110   5e-25

>Medtr4g106790.1 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 187

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/188 (71%), Positives = 150/188 (79%), Gaps = 6/188 (3%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQAIDTATLVIQQPNGKEE+LYWPV+ASEVMKT+P HYVALLISTTLCTSKD ENC 
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 61  NKKSDSNTTNP---VRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNE- 116
           NK+SD +  N    VR+TRIKLLKPTDTL+LGQVYRLISAQEV KG+ AKKQAKMKRN  
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSL 120

Query: 117 SESAPKINQKKEMM-DKPARRSEPEENQEAKNERHGSRXXXXXXXXXXXXXKSRTWQPSL 175
            ESA K NQ KE + DK A RSEP++N+E K+ERH SR             KSRTWQPSL
Sbjct: 121 PESAQKSNQIKERINDKTANRSEPKDNKETKSERHESR-TKATTNGGNHNNKSRTWQPSL 179

Query: 176 KSISEATS 183
           +SI+E+ S
Sbjct: 180 QSITESAS 187


>Medtr4g106790.2 | DUF4228 domain protein | HC |
           chr4:44080648-44082342 | 20130731
          Length = 167

 Score =  214 bits (545), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 114/148 (77%), Positives = 126/148 (85%), Gaps = 5/148 (3%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQAIDTATLVIQQPNGKEE+LYWPV+ASEVMKT+P HYVALLISTTLCTSKD ENC 
Sbjct: 1   MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCS 60

Query: 61  NKKSDSNTTNP---VRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNE- 116
           NK+SD +  N    VR+TRIKLLKPTDTL+LGQVYRLISAQEV KG+ AKKQAKMKRN  
Sbjct: 61  NKRSDDDDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSL 120

Query: 117 SESAPKINQKKEMM-DKPARRSEPEENQ 143
            ESA K NQ KE + DK A RSEP++N+
Sbjct: 121 PESAQKSNQIKERINDKTANRSEPKDNK 148


>Medtr3g078300.1 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  186 bits (472), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 100/184 (54%), Positives = 122/184 (66%), Gaps = 2/184 (1%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQAID ATLVIQ P+GK EK Y  +SAS+VMK NPGH VALLISTT+  +KD +NC 
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
              +    TN VRLTRIKLLKP DTL+LG VYRLI+ QEVMKG+  KKQAK+K+N S   
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMKGIREKKQAKIKQNMSHKP 120

Query: 121 PKINQKKEM-MDKPARRSEPEENQEAKNERHGSRXXXXXXXXXXXXXKSRTWQPSLKSIS 179
             +     + M+K A+R + ++N+  K ER   R             K+R WQPSL+SIS
Sbjct: 121 DLVKTTLGLEMEKKAKRFDTKDNKATKPERSQGR-TTSTNNAVIVTAKTRFWQPSLQSIS 179

Query: 180 EATS 183
           E  S
Sbjct: 180 EIAS 183


>Medtr3g078300.2 | DUF4228 domain protein | HC |
           chr3:35276942-35278238 | 20130731
          Length = 183

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 105/149 (70%), Gaps = 1/149 (0%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQAID ATLVIQ P+GK EK Y  +SAS+VMK NPGH VALLISTT+  +KD +NC 
Sbjct: 1   MGNCQAIDAATLVIQHPSGKTEKFYSSLSASQVMKMNPGHCVALLISTTVYPNKDIQNCS 60

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
              +    TN VRLTRIKLLKP DTL+LG VYRLI+ QEVMKG+  KKQAK+K+N S   
Sbjct: 61  KNNNGDTKTNQVRLTRIKLLKPNDTLILGHVYRLITTQEVMKGIREKKQAKIKQNMSHKP 120

Query: 121 PKINQKKEM-MDKPARRSEPEENQEAKNE 148
             +     + M+K A+R + ++N+   N 
Sbjct: 121 DLVKTTLGLEMEKKAKRFDTKDNKVNLNH 149


>Medtr5g035430.1 | DUF4228 domain protein | HC |
           chr5:15407370-15405451 | 20130731
          Length = 173

 Score =  137 bits (345), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 105/185 (56%), Gaps = 19/185 (10%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQA+D A LVIQ P GK ++LYWPV+ASEVMKTNPGHYV+L++              
Sbjct: 1   MGNCQAVDAAVLVIQHPCGKIDRLYWPVTASEVMKTNPGHYVSLIMPLPP---------- 50

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
             +  +     VR TR+KLL+P +TL LG  YRLI+ QEVMK L AKK AK  + E E+ 
Sbjct: 51  QPQEQNQEQKTVRFTRVKLLRPNETLNLGHAYRLITNQEVMKVLKAKKHAKSMKTEGEAV 110

Query: 121 PKINQKKEMMDKPARRSEPEENQEAKNERHG----SRXXXXXXXXXXXXXKSRTWQPSLK 176
                K E         + EE+ + K  + G    ++             +S++W+PSL+
Sbjct: 111 -----KVEKEGSGCETKKGEESDQGKTYQGGRAERNKQRSGGSTNPAAVQRSKSWRPSLQ 165

Query: 177 SISEA 181
           SISE+
Sbjct: 166 SISES 170


>Medtr4g097220.1 | DUF4228 domain protein | HC |
           chr4:40063713-40060326 | 20130731
          Length = 168

 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 23/184 (12%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQA + AT+VI +P  K E++YW VSA EVM +NPGHYVAL++S+           P
Sbjct: 1   MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSS-----------P 49

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
             KS+    N + L  +KLL+P DTL++GQVYRLIS ++V+K   +KK  K+ +   ES 
Sbjct: 50  TLKSE----NGMPLKHLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCGKLGKLLKESG 105

Query: 121 PKINQKKEMMDKPARRSEPE----ENQEAKNERHGSRXXXXXXXXXXXXXKSRTWQPSLK 176
              N+  +M  +  R   P     E +  + E +GSR              S  W+P+L+
Sbjct: 106 ---NRGIQMKHRDFRAPNPSPVKVERETQRTESNGSR-STNRSVGRHIVGGSGQWRPALQ 161

Query: 177 SISE 180
           SI+E
Sbjct: 162 SIAE 165


>Medtr8g063200.1 | DUF4228 domain protein | HC |
           chr8:26461240-26460444 | 20130731
          Length = 173

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 98/188 (52%), Gaps = 20/188 (10%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQ ID A LVIQ P+GK E+LYW VSAS VM+ NPG+YV+L++   L   ++ EN  
Sbjct: 1   MGNCQTIDAAALVIQHPSGKIERLYWSVSASYVMRANPGYYVSLIMP--LPQEQEGEN-- 56

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
              S++    PV  TR+KLLKP DTL LG  YRLI+ QEV K         MK  + ++ 
Sbjct: 57  ---SNNEVKKPVLFTRVKLLKPDDTLTLGHAYRLITTQEVEK--------VMKAKKRKAR 105

Query: 121 PKINQKKEMMDKPARRSEPEENQEAKNER-----HGSRXXXXXXXXXXXXXKSRTWQPSL 175
            K  +  EMM      S  E        R        R             + ++W+PSL
Sbjct: 106 GKTVEDVEMMHLEKENSACESEGMLDTGRMYQAMRADRQRLRVVSVNPAVPRPKSWRPSL 165

Query: 176 KSISEATS 183
           +SISE + 
Sbjct: 166 QSISEFSG 173


>Medtr4g097220.2 | DUF4228 domain protein | HC |
           chr4:40063713-40062352 | 20130731
          Length = 139

 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/139 (43%), Positives = 85/139 (61%), Gaps = 18/139 (12%)

Query: 1   MGNCQAIDTATLVIQQPNGKEEKLYWPVSASEVMKTNPGHYVALLISTTLCTSKDSENCP 60
           MGNCQA + AT+VI +P  K E++YW VSA EVM +NPGHYVAL++S+           P
Sbjct: 1   MGNCQAAELATVVIHRPGNKVERIYWSVSAHEVMNSNPGHYVALVVSS-----------P 49

Query: 61  NKKSDSNTTNPVRLTRIKLLKPTDTLVLGQVYRLISAQEVMKGLLAKKQAKMKRNESESA 120
             KS+    N + L  +KLL+P DTL++GQVYRLIS ++V+K   +KK  K+ +   ES 
Sbjct: 50  TLKSE----NGMPLKHLKLLRPDDTLLIGQVYRLISFEDVLKEFASKKCGKLGKLLKESG 105

Query: 121 PKINQKKEMMDKPARRSEP 139
              N+  +M  +  R   P
Sbjct: 106 ---NRGIQMKHRDFRAPNP 121