Miyakogusa Predicted Gene
- Lj4g3v1535190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1535190.1 Non Characterized Hit- tr|G7JNU4|G7JNU4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,84.27,0,Trypsin,Peptidase S1/S6, chymotrypsin/Hap; PDZ_2,PDZ
domain; seg,NULL; Trypsin-like serine proteases,CUFF.49375.1
(495 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g106730.1 | serine endopeptidase degp2 protein, putative |... 819 0.0
Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 | ... 467 e-131
Medtr6g004110.1 | DegP protease | HC | chr6:124909-119777 | 2013... 419 e-117
Medtr6g004110.2 | DegP protease | HC | chr6:124909-119813 | 2013... 387 e-107
Medtr6g007030.1 | trypsin-like serine protease | HC | chr6:13500... 66 8e-11
Medtr7g113170.1 | trypsin-like serine protease | HC | chr7:46585... 58 2e-08
Medtr6g011810.1 | trypsin-like serine protease | HC | chr6:35243... 53 7e-07
>Medtr4g106730.1 | serine endopeptidase degp2 protein, putative | HC
| chr4:44048692-44043150 | 20130731
Length = 590
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/483 (83%), Positives = 438/483 (90%), Gaps = 7/483 (1%)
Query: 1 MDDVFSNGSVDLIDDTSSPHLXXXXXXXXKT-PAIPDKPP-GRRLPRHVDGSAVPA---- 54
+DD FS G+V+LID+ L K PAIP+KPP GRRL R AVPA
Sbjct: 42 IDDDFSVGNVELIDNGPPSQLGRGRRGRPKKHPAIPEKPPAGRRLTRSDSNGAVPAVPPP 101
Query: 55 -EVGVATIMEPDPVFEGVAARVLPAMDPVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVI 113
E G AT M+ DP++E ++ RVLP+MD VVKVFCVHTEPNFSLPWQRKRQYSSSS+GFVI
Sbjct: 102 VEAGGATPMDADPIWERLSTRVLPSMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSTGFVI 161
Query: 114 AGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIALLTVDDDEFWQGMSPVE 173
+G+RVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIA+LTVDDDEFWQGMSPV+
Sbjct: 162 SGKRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVD 221
Query: 174 FGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSG 233
FG+LPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSG
Sbjct: 222 FGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSG 281
Query: 234 GPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIRDYEKNGSYTGFPILGVEWQK 293
GPAFN KG CVGIAFQSLKHEDVENIGYVIPTPVIMHFI+DYEKNG YTGFPILGVEWQK
Sbjct: 282 GPAFNGKGTCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQK 341
Query: 294 MENPDLRKSMGMRSDQKGVRIRRIDPTAPESKVLKPSDVILSFDGVNIANDGTVPFRHGE 353
MENPDLR +MGM+SDQKGVRIRRIDPT+PES VLKPSDVILSFDGV+IANDGTVPFRHGE
Sbjct: 342 MENPDLRMAMGMKSDQKGVRIRRIDPTSPESNVLKPSDVILSFDGVDIANDGTVPFRHGE 401
Query: 354 RIGFSYLISQKYTGDNAVIKVLRNSDVLTFDVKLNSHRRLIPAHSKGKPPSYYIIAGFVF 413
RIGFSYLISQKYTGD+A IKVLR+S+VL F++KL+ HRRLIPAHSKGKPPSYYIIAGFVF
Sbjct: 402 RIGFSYLISQKYTGDDAAIKVLRSSNVLKFNIKLDGHRRLIPAHSKGKPPSYYIIAGFVF 461
Query: 414 SAVSVPYLRSEYGKDYEFEAPVKLLDKLLHSMPQSPDEQLVVISQVLVADINIGYEDIVN 473
S VSVPYLRSEYGKDYE+EAPVK+LDKLL++MPQSPDEQLVVISQVLVADINIGYE+IVN
Sbjct: 462 STVSVPYLRSEYGKDYEYEAPVKILDKLLYAMPQSPDEQLVVISQVLVADINIGYEEIVN 521
Query: 474 TQV 476
TQV
Sbjct: 522 TQV 524
>Medtr1g088980.1 | DegP protease | HC | chr1:39969497-39960538 |
20130731
Length = 596
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/398 (55%), Positives = 293/398 (73%), Gaps = 5/398 (1%)
Query: 79 MDPVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIAGRRVLTNAHSVEHYTQVKLKKRGS 138
++ VVKV+C HT P++SLPWQ++RQ++S+ S F+I G+++LTNAH VEH TQVK+K+RG
Sbjct: 102 LNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGGKKLLTNAHCVEHDTQVKVKRRGD 161
Query: 139 DTKYLATVLAIGTECDIALLTVDDDEFWQGMSPVEFGDLPTLQDAVTVVGYPIGGDTISV 198
D+KY+A VLA CD+ALL+V+ +EFW+ + P+ FG LP LQD+VTVVGYP GGDTISV
Sbjct: 162 DSKYVAKVLARAAGCDLALLSVESEEFWRDVEPLRFGHLPHLQDSVTVVGYPFGGDTISV 221
Query: 199 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVEN 258
T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G C+G+AFQ + ED EN
Sbjct: 222 TKGVVSRVEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEDAEN 281
Query: 259 IGYVIPTPVIMHFIRDYEKNGSYTGFPILGVEWQKMENPDLRKSMGMRSDQKGVRIRRID 318
IGYVIP+ V+ HF+ DYEKNG YTGFP LGV QK+ENP LR + ++S++ GV +RR++
Sbjct: 282 IGYVIPSTVVSHFLTDYEKNGKYTGFPCLGVLIQKLENPALRACLKLQSNE-GVLVRRVE 340
Query: 319 PTAPESKVLKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLRNS 378
PT+ + VLK DVI+SFD + + +GTVPFR ERI F YLISQK+ GD A + ++R+
Sbjct: 341 PTSDANNVLKEGDVIVSFDDIRVGCEGTVPFRSNERIAFHYLISQKFAGDTAELGIVRDG 400
Query: 379 DVLTFDVKLNSHRRLIPAHSKGKPPSYYIIAGFVFSAVSVPYLRSEYGKDYEFEAPVKLL 438
+ V LN L+P H PSY IIAG VF+ +S P + E E +KLL
Sbjct: 401 TSMKAKVILNPRVHLVPFHIDEGQPSYLIIAGLVFTPLSEPLIEEE----REDCIGLKLL 456
Query: 439 DKLLHSMPQSPDEQLVVISQVLVADINIGYEDIVNTQV 476
K +S + EQ+V++SQVL ++NIGYED+ N Q+
Sbjct: 457 AKARYSFARFKGEQIVILSQVLANELNIGYEDMSNQQI 494
>Medtr6g004110.1 | DegP protease | HC | chr6:124909-119777 |
20130731
Length = 550
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/400 (53%), Positives = 273/400 (68%), Gaps = 6/400 (1%)
Query: 78 AMDPVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIAGRRVLTNAHSVEHYTQVKLKKRG 137
A + VVK+F V PN+ LPWQ K Q S SGFVI GR++LTNAH V ++ V ++K G
Sbjct: 79 AFNSVVKIFTVSCSPNYLLPWQNKSQRESMGSGFVIHGRKILTNAHVVADHSFVLVRKHG 138
Query: 138 SDTKYLATVLAIGTECDIALLTVDDDEFWQGMSPVEFGDLPTLQDAVTVVGYPIGGDTIS 197
S KY A V A+G ECD+ALL VD EFW GM P+EFGD+P LQ AV VVGYP GGDTIS
Sbjct: 139 SPNKYRAQVKAVGHECDLALLIVDSHEFWDGMLPLEFGDIPFLQQAVAVVGYPQGGDTIS 198
Query: 198 VTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCV-GIAFQSLKHEDV 256
VT GVVSR+E YVHG+++L+ +QIDAAIN GNSGGPA GN V G+AFQ+L
Sbjct: 199 VTKGVVSRVEPTQYVHGASQLMAIQIDAAINPGNSGGPAI--MGNKVAGVAFQNL--SGA 254
Query: 257 ENIGYVIPTPVIMHFIRDYEKNGSYTGFPILGVEWQKMENPDLRKSMGMRSDQKGVRIRR 316
ENIGY+IP PVI HFI D E+NG Y GF LG+ Q EN LR GM+ GV + +
Sbjct: 255 ENIGYIIPVPVIKHFISDVEENGKYIGFCSLGLSCQTTENVHLRNHFGMQRGMTGVLVNK 314
Query: 317 IDPTAPESKVLKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLR 376
I+P + +VLK +D+ILSFDGV IANDGTVPFR+ ERI F +L+S K + AV++V+R
Sbjct: 315 INPLSDAYRVLKKNDIILSFDGVPIANDGTVPFRNRERITFDHLVSMKKLNEKAVVRVMR 374
Query: 377 NSDVLTFDVKLNSHRRLIPAHSKGKPPSYYIIAGFVFSAVSVPYLRSEYGKDYEFEAPVK 436
+ L + L + L+P H K PSYYI AG VF ++ PYL EYG+D+ +P +
Sbjct: 375 DGQELELSITLQPIQPLVPVHQFDKLPSYYIFAGLVFVPLTQPYLH-EYGEDWYNASPRR 433
Query: 437 LLDKLLHSMPQSPDEQLVVISQVLVADINIGYEDIVNTQV 476
L ++ L +P+ ++QLV++SQVL+ DIN GYE + + QV
Sbjct: 434 LCERALRELPKKENQQLVILSQVLMDDINAGYERLADLQV 473
>Medtr6g004110.2 | DegP protease | HC | chr6:124909-119813 |
20130731
Length = 443
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/369 (53%), Positives = 255/369 (69%), Gaps = 6/369 (1%)
Query: 109 SGFVIAGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIALLTVDDDEFWQG 168
SGFVI GR++LTNAH V ++ V ++K GS KY A V A+G ECD+ALL VD EFW G
Sbjct: 3 SGFVIHGRKILTNAHVVADHSFVLVRKHGSPNKYRAQVKAVGHECDLALLIVDSHEFWDG 62
Query: 169 MSPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAIN 228
M P+EFGD+P LQ AV VVGYP GGDTISVT GVVSR+E YVHG+++L+ +QIDAAIN
Sbjct: 63 MLPLEFGDIPFLQQAVAVVGYPQGGDTISVTKGVVSRVEPTQYVHGASQLMAIQIDAAIN 122
Query: 229 SGNSGGPAFNDKGNCV-GIAFQSLKHEDVENIGYVIPTPVIMHFIRDYEKNGSYTGFPIL 287
GNSGGPA GN V G+AFQ+L ENIGY+IP PVI HFI D E+NG Y GF L
Sbjct: 123 PGNSGGPAI--MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFISDVEENGKYIGFCSL 178
Query: 288 GVEWQKMENPDLRKSMGMRSDQKGVRIRRIDPTAPESKVLKPSDVILSFDGVNIANDGTV 347
G+ Q EN LR GM+ GV + +I+P + +VLK +D+ILSFDGV IANDGTV
Sbjct: 179 GLSCQTTENVHLRNHFGMQRGMTGVLVNKINPLSDAYRVLKKNDIILSFDGVPIANDGTV 238
Query: 348 PFRHGERIGFSYLISQKYTGDNAVIKVLRNSDVLTFDVKLNSHRRLIPAHSKGKPPSYYI 407
PFR+ ERI F +L+S K + AV++V+R+ L + L + L+P H K PSYYI
Sbjct: 239 PFRNRERITFDHLVSMKKLNEKAVVRVMRDGQELELSITLQPIQPLVPVHQFDKLPSYYI 298
Query: 408 IAGFVFSAVSVPYLRSEYGKDYEFEAPVKLLDKLLHSMPQSPDEQLVVISQVLVADINIG 467
AG VF ++ PYL EYG+D+ +P +L ++ L +P+ ++QLV++SQVL+ DIN G
Sbjct: 299 FAGLVFVPLTQPYLH-EYGEDWYNASPRRLCERALRELPKKENQQLVILSQVLMDDINAG 357
Query: 468 YEDIVNTQV 476
YE + + QV
Sbjct: 358 YERLADLQV 366
>Medtr6g007030.1 | trypsin-like serine protease | HC |
chr6:1350091-1343643 | 20130731
Length = 432
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 107 SSSGFVI-AGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIALLTVDDDEF 165
S SGFV ++TN H + + +++ T Y A V+ + D+A+L VD +
Sbjct: 149 SGSGFVWDKDGHIVTNYHVIRGASDLRVTLADQST-YDAKVVGFDQDKDVAVLRVDAPK- 206
Query: 166 WQGMSPVEFG---DLPTLQDAVTVVGYPIGGDTISVTSGVVS--RIEILSYVHGSTELLG 220
+ P+ G DL Q V +G P G D ++T+GV+S R EI S G
Sbjct: 207 -DKLRPIPVGVSADLLVGQ-KVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDV 263
Query: 221 LQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVEN-IGYVIPTPVIMHFIRDYEKNG 279
+Q DAAIN GNSGGP + GN +GI + +G+ IP + + K G
Sbjct: 264 IQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 323
Query: 280 SYTGFPILGVEWQKMENPDLR-KSMGMRSDQKGVRIRRIDPTAPESKV------------ 326
T PILG+++ PD + +G+ GV + T P K
Sbjct: 324 KVT-RPILGIKFA----PDQSVEQLGV----SGVLVLDAPVTGPAGKAGLQSTKRDSYGR 374
Query: 327 LKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLR 376
L D+I S +G +AN G+ +R ++ Q GD +++VLR
Sbjct: 375 LILGDIITSVNGNKVAN-GSDLYR---------ILDQCKVGDKVIVEVLR 414
>Medtr7g113170.1 | trypsin-like serine protease | HC |
chr7:46585203-46590419 | 20130731
Length = 433
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 23/237 (9%)
Query: 118 VLTNAHSVEHYTQVKLKKRGS-------DTKYLATVLAIGTECDIALLTVDDDEFWQGMS 170
+LT AH V + K +G + V+ DIA++ ++ + +
Sbjct: 158 ILTCAHVVVDFHGTKGSSKGKIEVTLQDGRTFEGKVVNADMHSDIAVVKINSE---TPLP 214
Query: 171 PVEFGDLPTLQ--DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAA 226
+ G L+ D V +G P +VT+G+VS ++ S G + LQ D A
Sbjct: 215 EAKLGSSTMLRPGDWVIAMGCPHSLQN-TVTAGIVSCVDRKSSDLGFSGSPREYLQTDCA 273
Query: 227 INSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIRDYEKNGS----YT 282
IN GNSGGP N G VG+ + D +G+ +P + I ++K+G +
Sbjct: 274 INVGNSGGPLVNMDGEIVGVNIMKVLAAD--GLGFSVPIDSVCKIIEHFKKSGRVIRPWL 331
Query: 283 GFPILGVEWQKMENPDLRKSMGMRSDQKGVRIRRIDPTAPESKV-LKPSDVILSFDG 338
G +L + +E +K + KG+ + + P +P + +P DV++ FDG
Sbjct: 332 GLRMLDLNEMIIEQLK-KKDASFPNVNKGILVPMVTPGSPGDRAGFRPGDVVVEFDG 387
>Medtr6g011810.1 | trypsin-like serine protease | HC |
chr6:3524383-3530604 | 20130731
Length = 458
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 154 DIALLTVDDDEFWQGMSPVEFGDLPTLQ--DAVTVVGYPIGGDTISVTSGVVSRI--EIL 209
D+A+L VD + + + P+ G+ +L+ +G P G D ++T GV+S + +I
Sbjct: 224 DLAVLKVDAPK--EILKPINVGESSSLKVGQQCLAIGNPFGFDH-TLTVGVISGLNRDIF 280
Query: 210 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVE-NIGYVIPTPVI 268
S G T G+Q DAAIN GNSGGP N KG+ +GI +G+ IP+ +
Sbjct: 281 SKT-GVTIGGGIQTDAAINPGNSGGPLLNSKGSLIGINAAIFTQTGTSAGVGFAIPSSTV 339
Query: 269 MHFI 272
+
Sbjct: 340 RRIV 343