Miyakogusa Predicted Gene

Lj4g3v1535080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1535080.1 Non Characterized Hit- tr|K4C8K9|K4C8K9_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,48.12,3e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL,CUFF.49357.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106650.1 | hypothetical protein | HC | chr4:44011506-4401...   176   7e-45
Medtr3g078240.1 | NHL domain protein | HC | chr3:35240415-352416...   117   4e-27
Medtr6g007727.1 | NHL domain protein | HC | chr6:1857266-1857992...    86   2e-17
Medtr2g461190.1 | stress induced protein | HC | chr2:25246302-25...    69   1e-12
Medtr4g116530.1 | stress induced protein | HC | chr4:48276959-48...    67   4e-12

>Medtr4g106650.1 | hypothetical protein | HC |
           chr4:44011506-44012525 | 20130731
          Length = 149

 Score =  176 bits (446), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 92/146 (63%), Positives = 108/146 (73%), Gaps = 13/146 (8%)

Query: 1   MSIELESESTTPTGH---QRSNAFCF--CFGPRRRSSWWQRVRT-----SHSTVSGDRWW 50
           MS+ELE ES  PT H   +RS+A CF  CF  RRRS WW+RVR+     SH   + DRWW
Sbjct: 1   MSVELELES--PTAHLQQKRSSALCFPTCFASRRRSVWWERVRSASFSQSHPPTTADRWW 58

Query: 51  SRGIRALKKVREWSEILAGPRWKTFIRRLSHHRSHKRMTKYQYDPFSYALNFDEGQNGDF 110
           SRG++ALKK+R WSEI+AGPRWK FIR+ ++HRS KRMTK QYDP SYALNFDEGQN D 
Sbjct: 59  SRGLKALKKLRNWSEIVAGPRWKNFIRKFNNHRS-KRMTKCQYDPLSYALNFDEGQNEDS 117

Query: 111 PDDGFRNFSTRYAVAAVKPVSSPEKG 136
            DDGFRNFSTRYA   +K V+   +G
Sbjct: 118 HDDGFRNFSTRYAAVNIKSVAPEPEG 143


>Medtr3g078240.1 | NHL domain protein | HC | chr3:35240415-35241616
           | 20130731
          Length = 143

 Score =  117 bits (292), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 24/140 (17%)

Query: 5   LESESTTPTGHQRSNA---FCF-CFGPRRRSS---WWQRVRTSHSTVSGDRWWSRGIRAL 57
           +  +S++ +  + SN    FCF CFG R  ++   WW+RVR S  +           R  
Sbjct: 1   MNHDSSSLSNEETSNTRCTFCFPCFGSRHSTTTEPWWERVRASSVS-----------RGF 49

Query: 58  KKVREWSEILAGPRWKTFIRRLSHHRS--HKRMTKYQYDPFSYALNFDEGQNGDFPD--- 112
            K+REWSEI+AGPRWKTFIRR + ++S   +   KYQYDP SYALNFDEGQNG+F +   
Sbjct: 50  MKIREWSEIVAGPRWKTFIRRFNRNKSGGFRHAGKYQYDPLSYALNFDEGQNGEFENDSP 109

Query: 113 DGFRNFSTRYAVAAVKPVSS 132
           DGFRNFS RY VAAV  + S
Sbjct: 110 DGFRNFSARY-VAAVPTLKS 128


>Medtr6g007727.1 | NHL domain protein | HC | chr6:1857266-1857992 |
           20130731
          Length = 156

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 14/144 (9%)

Query: 8   ESTTPTGHQRSNAFCF---CFGPRRRS-SWWQRVRT-SHSTVSGDRWWSRGIRALKKVRE 62
           E    T  ++    CF   CF     S SWW+R++  S       +WW RG     KVRE
Sbjct: 17  EDMQETAFRKRGCICFPIPCFSSETSSPSWWERIQIQSPEKNHHHQWWFRG---WMKVRE 73

Query: 63  WSEILAGPRWKTFIRRLSHHR-SHKRMTKYQYDPFSYALNFDEG---QNGDFPDDGFRNF 118
            SEI+AGP+WKTFIRR   +R S+ +     YDP SYALNFD+G   ++G+F   G+  F
Sbjct: 74  LSEIVAGPKWKTFIRRFGKNRNSYVKQGTLNYDPSSYALNFDDGATREDGNF--YGYGGF 131

Query: 119 STRYAVAAVKPVSSPEKGSDVAVL 142
           S RYA   V   SS +   +  V+
Sbjct: 132 SARYAAVPVTEKSSMDLKKEAPVI 155


>Medtr2g461190.1 | stress induced protein | HC |
           chr2:25246302-25247199 | 20130731
          Length = 141

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 4/78 (5%)

Query: 47  DRWWSRGIRALKKVREWSEILAGPRWKTFIRRLSHHRSHKRMTKYQYDPFSYALNFDEGQ 106
           D WW   +  L+K++E SE++AGP+WKTFIR++S +   ++  K+QYD  SYALNF  G 
Sbjct: 57  DSWW---VCKLRKMKEVSEVIAGPKWKTFIRKISMYGKKQQKGKFQYDEHSYALNFSSGA 113

Query: 107 NGDFPDDGFRNFSTRYAV 124
             +  DD   +FS R++ 
Sbjct: 114 QSE-DDDLPHSFSARFSA 130


>Medtr4g116530.1 | stress induced protein | HC |
           chr4:48276959-48277730 | 20130731
          Length = 149

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 16/133 (12%)

Query: 1   MSIELESESTTPTGHQRSNAF-CFCFGPRR-RSSWWQRVRTSHSTVSGDRWWSRGIRA-- 56
           M +E+ES+       + +N + C C   R   S WWQR       +  ++  S G R   
Sbjct: 11  MEMEMESKQD----FEETNGYGCGCGWSRIFTSKWWQRHDEEGKHLLNEK--SEGNRGEE 64

Query: 57  ------LKKVREWSEILAGPRWKTFIRRLSHHRSHKRMTKYQYDPFSYALNFDEGQNGDF 110
                 LKK++E SE++AGP+WKTF+R++S +   ++  ++QYD  SYALNF+ G   + 
Sbjct: 65  TWMMDKLKKMKETSEVIAGPKWKTFLRKISGYGKKQQKHRFQYDAHSYALNFNSGAQSED 124

Query: 111 PDDGFRNFSTRYA 123
            +    +FSTR++
Sbjct: 125 EEYLPPSFSTRFS 137