Miyakogusa Predicted Gene

Lj4g3v1534940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1534940.1 Non Characterized Hit- tr|G7JNT5|G7JNT5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,79.77,0,seg,NULL,CUFF.49349.1
         (262 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106630.1 | transmembrane protein, putative | HC | chr4:44...   369   e-102

>Medtr4g106630.1 | transmembrane protein, putative | HC |
           chr4:44004430-44001993 | 20130731
          Length = 261

 Score =  369 bits (947), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 184/262 (70%), Positives = 205/262 (78%), Gaps = 3/262 (1%)

Query: 1   MPGPGPHLMYAMGSGLALTTSTNGRFSPHHTLFYTVNSFFGPDIGSFSEWLGSLLGGPAD 60
           MPGPGPH+MYAMGSGL LTT +NGRFSPHHTL YT+NSFFGPDIGSFS+WL SL GG   
Sbjct: 1   MPGPGPHMMYAMGSGLCLTTVSNGRFSPHHTLIYTINSFFGPDIGSFSQWLVSLFGG--H 58

Query: 61  TVGSAVADXXXXXXXXXXXXGFPLCVLYSWISAFLIQRHLLDS-VSRVPLTRMQCFYLIS 119
           TV S  AD            G+PLC+LYS IS+FL+ +H LDS  S+VPLT+MQC +LIS
Sbjct: 59  TVASTFADYIHHPFYYIIILGYPLCLLYSRISSFLLHKHFLDSSFSKVPLTKMQCLFLIS 118

Query: 120 AGSFTHFFLDHLFEENGKTTTYTWILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFFYLN 179
           AGS THFFLDHLFEENGKTT YTWILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFFYLN
Sbjct: 119 AGSLTHFFLDHLFEENGKTTMYTWILSTGWWQGRAPVNPDAVVVVGFLCVCLIGGFFYLN 178

Query: 180 RANSSNXXXXXXXXXXXXXXXXXXXYCLWCSIQIYWINPRRPAVGEEADLGVLVFLALYF 239
           RA+SS+                   YCLWC+IQIY I+ RRPA+GEEADLGV++F A YF
Sbjct: 179 RASSSDSIKKKSYQSMLLMVSIASLYCLWCAIQIYVISLRRPAIGEEADLGVIIFFAFYF 238

Query: 240 FLPYSLCIMSMYPKDHDTNQIP 261
           FLPY LCI SM+PKD D+NQIP
Sbjct: 239 FLPYCLCITSMHPKDLDSNQIP 260