Miyakogusa Predicted Gene

Lj4g3v1511460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1511460.1 Non Characterized Hit- tr|I0YMB5|I0YMB5_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,32.3,3e-18,Pex14_N,Peroxisome membrane anchor protein Pex14p,
N-terminal; coiled-coil,NULL; SUBFAMILY NOT NAMED,CUFF.49368.1
         (499 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putat...   536   e-152

>Medtr4g106880.1 | peroxisomal membrane PEX14-like protein, putative
           | HC | chr4:43922357-43914901 | 20130731
          Length = 523

 Score =  536 bits (1381), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 305/508 (60%), Positives = 337/508 (66%), Gaps = 33/508 (6%)

Query: 16  DENQGAEIVQPTNLGQQNATEEPVKQSSTTSVFVNTEPLREDQIQNAVKFLSHPKVKGSP 75
           DENQGA+I+QP+N+ QQNA +E VK  S+TSVFVN+EPLRE+Q+QNAVKFLSHPKVKGSP
Sbjct: 23  DENQGADIIQPSNMDQQNAGDESVKPISSTSVFVNSEPLREEQVQNAVKFLSHPKVKGSP 82

Query: 76  VIYRRSFLEKKGLTKEEIDEAFRRVPDDAPTVQTSGVNQDGQLKPSSNTHQSAQIQTLQP 135
           V+YRRSFLEKKGLTKEEIDEAFRRVPD APTVQTSGV QDGQLK  SN  Q AQ QTLQP
Sbjct: 83  VMYRRSFLEKKGLTKEEIDEAFRRVPDSAPTVQTSGVTQDGQLKSPSNVQQQAQQQTLQP 142

Query: 136 GLPASTGVNSSSGTLSRSRFHWSHXXXXXXXXXXXXXXXXXIVKNSILPRLKSWIRKVAL 195
            LPASTGVN+SSG LSR+RFHWSH                 I+K S+LPRLKSWIRKV L
Sbjct: 143 VLPASTGVNTSSGALSRTRFHWSHALMLVGFLTASGAGTVLIIKKSLLPRLKSWIRKVVL 202

Query: 196 XXXXXXEQLKKTNKKPTLXXXXXXXXXXXXXXXXXXXXXSQEMLASKSEERKHFVEVVSL 255
                 EQ KKT+ KPTL                     SQEMLASK EERK+FVEVV L
Sbjct: 203 --DEDDEQSKKTDNKPTLVEEAAQAAKSAAAAAADVAKASQEMLASKGEERKYFVEVVGL 260

Query: 256 LDKQIQEMKLMTKAISRLEGQEDLRVSQTSSKQLIGNGKADYDLRSGRSLSPPASVETSS 315
           LDKQ+QEMKLMT AI RLEGQEDLRVSQTS KQL+ NGKADYDLRS RSLSPPA VE S 
Sbjct: 261 LDKQVQEMKLMTNAIRRLEGQEDLRVSQTSLKQLVANGKADYDLRSVRSLSPPAPVEPSG 320

Query: 316 ALHPKSYAEIMAMVQRGEKPANIR-----------------------PWEVGQVQNTSTQ 352
             HPKSY EIMAMVQRGEKP+NIR                       PWE+GQVQNTS+Q
Sbjct: 321 PPHPKSYMEIMAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNTSSQ 380

Query: 353 VLQPQQNGEDLNNIKVQEATQSNGVDPVPWWQKKNVRIREIEENEYNVAPFGAASTXXXX 412
           V QPQ NGE+ + IKVQ+ TQSNG DP PWWQKKNVRIREI+E EYN AP G+AS+    
Sbjct: 381 VFQPQANGEE-SYIKVQDTTQSNGDDPTPWWQKKNVRIREIDEIEYNGAPNGSASSQQPL 439

Query: 413 XXXXXXXXXXXXXXXXXXXXXXXXKSAVQKXXXXXXXXXXXXXXXXXXVRAVTKLPESEG 472
                                   K AVQK                     + K  ESEG
Sbjct: 440 QRVWVPPQPPPIAMAGAAEAIRRPKQAVQKEQASDNQSVVQSSDISNGEHEIPKPSESEG 499

Query: 473 AVEGNNTSSLIGSGEI---QEDNQVTQE 497
           AVEG+N    +GSGEI   QED++ T E
Sbjct: 500 AVEGSN----VGSGEIQVLQEDHETTYE 523