Miyakogusa Predicted Gene

Lj4g3v1511450.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1511450.1 Non Characterized Hit- tr|I3SR96|I3SR96_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,88.84,0,Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal
domain,NULL; NAD(P)-binding Rossmann-fold ,CUFF.49329.1
         (472 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g106870.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   877   0.0  
Medtr8g012565.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   729   0.0  
Medtr8g012565.2 | 1-deoxy-D-xylulose 5-phosphate reductoisomeras...   575   e-164

>Medtr4g106870.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr4:43911321-43906312 | 20130731
          Length = 475

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/475 (89%), Positives = 450/475 (94%), Gaps = 3/475 (0%)

Query: 1   MALNLSSPAEVKSSFFTDSFNSSCFTPKFPVSFALKRKGCGGVSGRRIHCSVQT---PPP 57
           MALNL SPAE+KS FFTD   S+ FTPKFP   ALKRK  G  SG R++CSVQ+   PPP
Sbjct: 1   MALNLYSPAELKSGFFTDPLKSNRFTPKFPGGVALKRKENGTASGTRVYCSVQSTSGPPP 60

Query: 58  AWPGRAVVEPGRKTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLLA 117
           AWPGRA+ E G KTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLL 
Sbjct: 61  AWPGRAIPELGNKTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLLV 120

Query: 118 DQVRRFKPQLVAVRNESLISELEEALNDLEEKPEIIPGEQGVIEVARHPDAVSVVTGIVG 177
           DQV+RFKPQLVAVRNESL++EL+EAL D+EEKPEIIPGEQGVIEVARHPDAV+VVTGIVG
Sbjct: 121 DQVKRFKPQLVAVRNESLLAELQEALKDVEEKPEIIPGEQGVIEVARHPDAVTVVTGIVG 180

Query: 178 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNIKILPADSEHSAIFQCIQGL 237
           CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLA+KHN+KILPADSEHSAIFQCIQGL
Sbjct: 181 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLARKHNVKILPADSEHSAIFQCIQGL 240

Query: 238 SEGALRRVILTASGGAFRDWPADKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVI 297
           +EGALRRVILTASGGAFRDWP +KLKDVKVADALKHPNW+MGKKITVDSATLFNKGLEVI
Sbjct: 241 TEGALRRVILTASGGAFRDWPVEKLKDVKVADALKHPNWSMGKKITVDSATLFNKGLEVI 300

Query: 298 EAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCS 357
           EAHYLFGADYD+IDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDR+YCS
Sbjct: 301 EAHYLFGADYDDIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCS 360

Query: 358 EVTWPRLDLCKLGSLTFKAPDNVKYPSVNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEK 417
           EVTWPRLDLCKLGSLTFKAPDN+KYPS+NLAYAAGRAGGTMTGVLSAANEKAVEMFIDEK
Sbjct: 361 EVTWPRLDLCKLGSLTFKAPDNIKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEK 420

Query: 418 ISYLDIFKVVELTCEKHQNELRTSPSLEEIIHYDLWAREYAASLQNTSSFTPIPA 472
           ISYLDIFKVVELTC+KHQ+EL TSPSLEEIIHYDLWAREYAASLQ++SSFTP+ A
Sbjct: 421 ISYLDIFKVVELTCQKHQDELLTSPSLEEIIHYDLWAREYAASLQSSSSFTPVLA 475


>Medtr8g012565.1 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr8:3629640-3635402 | 20130731
          Length = 470

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/469 (75%), Positives = 408/469 (86%), Gaps = 3/469 (0%)

Query: 1   MALNLSSPAEVKSSFFTDSFNSSCFTPKFPVSFALKRK-GCGGVSGRRIHCSV-QTPPPA 58
           MALNL SPA+VK SFF+D  N      K P SFALKRK G   V  RR++CS   +P PA
Sbjct: 1   MALNLPSPAQVKPSFFSDIINPVITPTKLPGSFALKRKEGDTKVVKRRVYCSAAHSPQPA 60

Query: 59  WPGRAVVEPGR-KTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLLA 117
           WPG A+ EP   KTW+GPKPIS++G TGSIGTQTL+IVAE P++FRVV LAAGSN+TLLA
Sbjct: 61  WPGTAIPEPSDFKTWDGPKPISVLGSTGSIGTQTLNIVAEFPERFRVVGLAAGSNVTLLA 120

Query: 118 DQVRRFKPQLVAVRNESLISELEEALNDLEEKPEIIPGEQGVIEVARHPDAVSVVTGIVG 177
           +QVR FKP+LVA+R+ES I EL+EAL  ++ KPEIIPGEQGVIEVARHPDA +VVTGIVG
Sbjct: 121 EQVRIFKPELVALRDESKIDELKEALAGIDHKPEIIPGEQGVIEVARHPDAATVVTGIVG 180

Query: 178 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNIKILPADSEHSAIFQCIQGL 237
           CAGLKPTVAAIEAGKDIALANKET+IAGG FVLPLA K+NIKILPADSEHSAIFQCIQGL
Sbjct: 181 CAGLKPTVAAIEAGKDIALANKETMIAGGAFVLPLAHKNNIKILPADSEHSAIFQCIQGL 240

Query: 238 SEGALRRVILTASGGAFRDWPADKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVI 297
            +GALR++ LT SGGAFR+WPA+K+KD+K+ DALKHP W++G+KIT+DSATLFNKGLEVI
Sbjct: 241 PKGALRKIQLTGSGGAFREWPAEKMKDIKLKDALKHPIWSLGRKITIDSATLFNKGLEVI 300

Query: 298 EAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCS 357
           EAHYLFGA+YD+I+IVIHPQSIIHS++ETQDSSV+AQLG PDMRLP+LYTLSWP+R+YCS
Sbjct: 301 EAHYLFGAEYDDIEIVIHPQSIIHSLVETQDSSVIAQLGLPDMRLPLLYTLSWPERVYCS 360

Query: 358 EVTWPRLDLCKLGSLTFKAPDNVKYPSVNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEK 417
           E+TWPRLDL K G+LTF+APD  K+PSVNL YAAGRAGGTMTGVLSAANE AVE+F+ EK
Sbjct: 361 EITWPRLDLTKYGTLTFQAPDTKKFPSVNLCYAAGRAGGTMTGVLSAANEIAVELFVAEK 420

Query: 418 ISYLDIFKVVELTCEKHQNELRTSPSLEEIIHYDLWAREYAASLQNTSS 466
           ISYLDIFK+ ELTC +HQ EL TSP+LEEI+HYD WAR+YAA LQ   S
Sbjct: 421 ISYLDIFKIAELTCNEHQKELVTSPTLEEILHYDQWARQYAAGLQKALS 469


>Medtr8g012565.2 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
           HC | chr8:3629640-3635387 | 20130731
          Length = 384

 Score =  575 bits (1483), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/377 (74%), Positives = 326/377 (86%), Gaps = 3/377 (0%)

Query: 1   MALNLSSPAEVKSSFFTDSFNSSCFTPKFPVSFALKRK-GCGGVSGRRIHCSV-QTPPPA 58
           MALNL SPA+VK SFF+D  N      K P SFALKRK G   V  RR++CS   +P PA
Sbjct: 1   MALNLPSPAQVKPSFFSDIINPVITPTKLPGSFALKRKEGDTKVVKRRVYCSAAHSPQPA 60

Query: 59  WPGRAVVEPGR-KTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLLA 117
           WPG A+ EP   KTW+GPKPIS++G TGSIGTQTL+IVAE P++FRVV LAAGSN+TLLA
Sbjct: 61  WPGTAIPEPSDFKTWDGPKPISVLGSTGSIGTQTLNIVAEFPERFRVVGLAAGSNVTLLA 120

Query: 118 DQVRRFKPQLVAVRNESLISELEEALNDLEEKPEIIPGEQGVIEVARHPDAVSVVTGIVG 177
           +QVR FKP+LVA+R+ES I EL+EAL  ++ KPEIIPGEQGVIEVARHPDA +VVTGIVG
Sbjct: 121 EQVRIFKPELVALRDESKIDELKEALAGIDHKPEIIPGEQGVIEVARHPDAATVVTGIVG 180

Query: 178 CAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQKHNIKILPADSEHSAIFQCIQGL 237
           CAGLKPTVAAIEAGKDIALANKET+IAGG FVLPLA K+NIKILPADSEHSAIFQCIQGL
Sbjct: 181 CAGLKPTVAAIEAGKDIALANKETMIAGGAFVLPLAHKNNIKILPADSEHSAIFQCIQGL 240

Query: 238 SEGALRRVILTASGGAFRDWPADKLKDVKVADALKHPNWNMGKKITVDSATLFNKGLEVI 297
            +GALR++ LT SGGAFR+WPA+K+KD+K+ DALKHP W++G+KIT+DSATLFNKGLEVI
Sbjct: 241 PKGALRKIQLTGSGGAFREWPAEKMKDIKLKDALKHPIWSLGRKITIDSATLFNKGLEVI 300

Query: 298 EAHYLFGADYDNIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRIYCS 357
           EAHYLFGA+YD+I+IVIHPQSIIHS++ETQDSSV+AQLG PDMRLP+LYTLSWP+R+YCS
Sbjct: 301 EAHYLFGAEYDDIEIVIHPQSIIHSLVETQDSSVIAQLGLPDMRLPLLYTLSWPERVYCS 360

Query: 358 EVTWPRLDLCKLGSLTF 374
           E+TWPRLDL K    + 
Sbjct: 361 EITWPRLDLTKYNRFSL 377