Miyakogusa Predicted Gene
- Lj4g3v1479300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1479300.1 tr|B9GZJ6|B9GZJ6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_554061 PE=4
SV=1,44.12,0.000000002,FAMILY NOT NAMED,NULL;
PARP_CATALYTIC,Poly(ADP-ribose) polymerase, catalytic domain; RST,RST
domain ,CUFF.49312.1
(348 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g105740.1 | inactive poly [ADP-ribose] polymerase SRO4 | H... 306 2e-83
Medtr4g105740.2 | inactive poly [ADP-ribose] polymerase SRO4 | H... 306 3e-83
Medtr3g077870.1 | inactive poly [ADP-ribose] polymerase SRO4 | H... 263 2e-70
Medtr8g088250.1 | inactive poly [ADP-ribose] polymerase SRO2, pu... 163 3e-40
Medtr1g112330.3 | inactive poly [ADP-ribose] polymerase RCD1 | H... 143 2e-34
Medtr1g112330.1 | inactive poly [ADP-ribose] polymerase RCD1 | H... 142 4e-34
Medtr1g112330.2 | inactive poly [ADP-ribose] polymerase RCD1 | H... 142 4e-34
Medtr5g032190.1 | inactive poly [ADP-ribose] polymerase RCD1 | H... 141 7e-34
Medtr5g029580.1 | inactive poly [ADP-ribose] polymerase SRO4 | L... 140 3e-33
Medtr7g011550.1 | inactive poly [ADP-ribose] polymerase RCD1 | L... 120 2e-27
Medtr1g112330.5 | inactive poly [ADP-ribose] polymerase RCD1 | H... 119 3e-27
Medtr1g112330.4 | inactive poly [ADP-ribose] polymerase RCD1 | H... 119 3e-27
Medtr5g032190.3 | inactive poly [ADP-ribose] polymerase RCD1 | H... 119 6e-27
Medtr5g032190.2 | inactive poly [ADP-ribose] polymerase RCD1 | H... 119 6e-27
Medtr7g011880.1 | RCD1-SRO-TAF4 (RST) plant domain protein | LC ... 70 3e-12
Medtr2g090130.1 | inactive poly [ADP-ribose] polymerase RCD1, pu... 62 1e-09
Medtr1g011730.1 | RCD one-like protein, putative | LC | chr1:220... 53 4e-07
>Medtr4g105740.1 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
chr4:43896289-43900298 | 20130731
Length = 325
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/297 (53%), Positives = 203/297 (68%), Gaps = 6/297 (2%)
Query: 12 LPRDFSGDDTDDSMASDCESGVSGGEVIVRADVRSLES-----VGRRFIDGLGPLASRIQ 66
LP+ S + D+S SDCES SGG R ++ E + RF+ GL +
Sbjct: 8 LPKHDSAGE-DESAISDCESVASGGHDSSRPVRKTTEGADINLIRSRFVCGLSAQGLKPY 66
Query: 67 VVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKHAWYSVSGMEEILEILQHGFG 126
V+I RN TV++QAR+ SF+IFARA A++R GNANVKH WY S EEI++I+QHGFG
Sbjct: 67 GVAIFRNPCKTVMAQARIQSFEIFARAVAKMRGGNANVKHVWYGASSREEIVDIIQHGFG 126
Query: 127 HDHHRGLRLSPEDSPHLSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYD 186
+ H GLRLSP D+P SV+R+V DK G RHL+LCRVI+G++E V GSDQ R S+E+D
Sbjct: 127 YVHSNGLRLSPNDTPLESVKRTVVDKQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEFD 186
Query: 187 SGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFRIPPTGRAVNVAAAREPSRPKSPWVPFPA 246
SGVD SSPKE+ + SN++NTHVLPEYVLSF++ V + RP SP++ FP
Sbjct: 187 SGVDSFSSPKEFIVWSNKINTHVLPEYVLSFKLASDKGHEKVGVGGQHMRPSSPFMQFPT 246
Query: 247 LISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLLFQVIKSFREK 303
LISALSKILP D+ + K K+YR+ KISR +MIQK+R +AGDKLLF VIKSFR K
Sbjct: 247 LISALSKILPPSDIVSIAKFHKEYRDKKISRHEMIQKVRKVAGDKLLFSVIKSFRAK 303
>Medtr4g105740.2 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
chr4:43896318-43900298 | 20130731
Length = 310
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 161/301 (53%), Positives = 205/301 (68%), Gaps = 12/301 (3%)
Query: 12 LPRDFSGDDTDDSMASDCESGVSGGEVIVR--------ADVRSLESVGRRFIDGLGPLAS 63
LP+ S + D+S SDCES SGG R AD+ + S RF+ GL
Sbjct: 8 LPKHDSAGE-DESAISDCESVASGGHDSSRPVRKTTEGADINLIRS---RFVCGLSAQGL 63
Query: 64 RIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKHAWYSVSGMEEILEILQH 123
+ V+I RN TV++QAR+ SF+IFARA A++R GNANVKH WY S EEI++I+QH
Sbjct: 64 KPYGVAIFRNPCKTVMAQARIQSFEIFARAVAKMRGGNANVKHVWYGASSREEIVDIIQH 123
Query: 124 GFGHDHHRGLRLSPEDSPHLSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISD 183
GFG+ H GLRLSP D+P SV+R+V DK G RHL+LCRVI+G++E V GSDQ R S+
Sbjct: 124 GFGYVHSNGLRLSPNDTPLESVKRTVVDKQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSE 183
Query: 184 EYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFRIPPTGRAVNVAAAREPSRPKSPWVP 243
E+DSGVD SSPKE+ + SN++NTHVLPEYVLSF++ V + RP SP++
Sbjct: 184 EFDSGVDSFSSPKEFIVWSNKINTHVLPEYVLSFKLASDKGHEKVGVGGQHMRPSSPFMQ 243
Query: 244 FPALISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLLFQVIKSFREK 303
FP LISALSKILP D+ + K K+YR+ KISR +MIQK+R +AGDKLLF VIKSFR K
Sbjct: 244 FPTLISALSKILPPSDIVSIAKFHKEYRDKKISRHEMIQKVRKVAGDKLLFSVIKSFRAK 303
Query: 304 L 304
+
Sbjct: 304 V 304
>Medtr3g077870.1 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
chr3:35056982-35060567 | 20130731
Length = 327
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 191/305 (62%), Gaps = 22/305 (7%)
Query: 22 DDSMASDCESGVSG---GE-------------VIVRADVRSLESVGRRFIDGLGPLASRI 65
D S SDCESGVS GE V + + + RF+ GLG L+S+
Sbjct: 19 DSSTVSDCESGVSATTTGEEQRQRRQNSDSFLVWLGEGDSVYDLLKTRFLHGLGALSSKA 78
Query: 66 QVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKHAWYSVSGMEEILEILQHGF 125
++++I+RN +SQAR+ SF ++A A ++LR G++NVK+AWY SG ++ IL +GF
Sbjct: 79 EILAIQRNACSDAVSQARLRSFLVYAEAVSKLRGGDSNVKYAWYGSSGENDVRGILSNGF 138
Query: 126 GHDHHRGLRLSPEDSPHLSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEY 185
H H + LSP+DSP SV+ +DG+RHL+LCRVILGR E+V + QC +Y
Sbjct: 139 SHVHGNSICLSPDDSPLQSVKSCAVGRDGVRHLILCRVILGRTEIVQADTKQCYPSCADY 198
Query: 186 DSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFRIPPTGRAVNVAAAREPSRPKSPWVPFP 245
DSGVD S+P +Y I S+RMNTHV P YVLSF++ +AV + RP SP VPFP
Sbjct: 199 DSGVDSFSAPTKYMIWSSRMNTHVWPAYVLSFKVSSL-KAVEIEGY---GRPTSPSVPFP 254
Query: 246 ALISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLLFQVIKSFREKLQ 305
LIS LSK+ PQ D+A++ K K +E KISR ++I+K+R IAGDKLLF +IK +R K
Sbjct: 255 TLISMLSKVSPQLDIALICKFYKARKEKKISRHELIEKVRQIAGDKLLFSIIKYYRAK-- 312
Query: 306 KPPPS 310
K P S
Sbjct: 313 KKPTS 317
>Medtr8g088250.1 | inactive poly [ADP-ribose] polymerase SRO2,
putative | HC | chr8:36541903-36539541 | 20130731
Length = 290
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 151/259 (58%), Gaps = 16/259 (6%)
Query: 50 VGRRFIDGLGPLASRIQVVSIRRNKFPTVIS-QARVDSFQIFARATAQLRHGNANVKHAW 108
+ + F+ G+G + +++I +N T ++ QA +DSF IF++A + GNANV+ AW
Sbjct: 26 IKKGFLKGMGFMVDVTNIMAIHKNNVSTNLTKQASLDSFHIFSKAVSIKCGGNANVRCAW 85
Query: 109 YSVSGMEEILEILQHGFG----------HDHHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
Y S ++E+++I+ GF H G+ LS + S +VAD++GLRH+
Sbjct: 86 YGGS-LDELVDIVSFGFTGCNIHVDDDDESHGVGISLSSANFSIDSAMSTVADENGLRHV 144
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
+LC+VILGR+E V S Q + +YD+GVDD+SSP+++ I + MN+H+ PEY++SF
Sbjct: 145 LLCKVILGRVENVPVDSKQSQPSCRQYDTGVDDISSPRKHIIWTAFMNSHIHPEYIVSFN 204
Query: 219 IPPTGRAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYREMKISRQ 278
V +P+S +V P L++ +S L M+++LK + Y+E KI+R+
Sbjct: 205 Y----NYVKDQGVFGTLKPQSEYVLLPNLVAKVSNHLKPSQMSLLLKSCRIYQEQKITRE 260
Query: 279 QMIQKLRVIAGDKLLFQVI 297
+ ++R I GD LL VI
Sbjct: 261 TWVNQVRKIVGDMLLHSVI 279
>Medtr1g112330.3 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr1:50854983-50849518 | 20130731
Length = 566
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 42/284 (14%)
Query: 47 LESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKH 106
L++V + F+ G G S +V I F + + Q+R++ F+ A R G+ANV++
Sbjct: 274 LDTVQKMFLKGTGSFGSAY-IVEIY--PFSSTLVQSRLELFEKQAEIAKNCR-GDANVRY 329
Query: 107 AWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
AW + S E+ +++ G GH H G+ L+ P S D++G+RH+
Sbjct: 330 AWLA-SSKGELPTMMKCGLGHCVPSAPKCMHGIGVHLAAATCPFASASYCDVDENGVRHI 388
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
V CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ + + + MNTH+ PE+V+SF+
Sbjct: 389 VFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIYPEFVVSFK 448
Query: 219 IPPTGRAVNVAAARE-----------------------------PSRPKSPWVPFPALIS 249
+ + + R+ P SP PF L +
Sbjct: 449 VSSDAEGLLLGCERKNNIFGVNSASYGPKILPRSESSRGIPTGSPEASTSPRFPFSTLFA 508
Query: 250 ALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLL 293
A+ +P DM ++ +R K++R ++ LR + GD LL
Sbjct: 509 AIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLRSVVGDDLL 552
>Medtr1g112330.1 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr1:50855008-50849523 | 20130731
Length = 569
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 45/287 (15%)
Query: 47 LESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKH 106
L++V + F+ G G S +V I F + + Q+R++ F+ A R G+ANV++
Sbjct: 274 LDTVQKMFLKGTGSFGSAY-IVEIY--PFSSTLVQSRLELFEKQAEIAKNCR-GDANVRY 329
Query: 107 AWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
AW + S E+ +++ G GH H G+ L+ P S D++G+RH+
Sbjct: 330 AWLA-SSKGELPTMMKCGLGHCVPSAPKCMHGIGVHLAAATCPFASASYCDVDENGVRHI 388
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
V CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ + + + MNTH+ PE+V+SF+
Sbjct: 389 VFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIYPEFVVSFK 448
Query: 219 IPPTGRAVNVAAARE--------------------------------PSRPKSPWVPFPA 246
+ + + R+ P SP PF
Sbjct: 449 VSSDAEGLLLGCERKNNIFGVNSASYGPKILPRSESSRVSTGIPTGSPEASTSPRFPFST 508
Query: 247 LISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLL 293
L +A+ +P DM ++ +R K++R ++ LR + GD LL
Sbjct: 509 LFAAIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLRSVVGDDLL 555
>Medtr1g112330.2 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr1:50855008-50849518 | 20130731
Length = 569
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 45/287 (15%)
Query: 47 LESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKH 106
L++V + F+ G G S +V I F + + Q+R++ F+ A R G+ANV++
Sbjct: 274 LDTVQKMFLKGTGSFGSAY-IVEIY--PFSSTLVQSRLELFEKQAEIAKNCR-GDANVRY 329
Query: 107 AWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
AW + S E+ +++ G GH H G+ L+ P S D++G+RH+
Sbjct: 330 AWLA-SSKGELPTMMKCGLGHCVPSAPKCMHGIGVHLAAATCPFASASYCDVDENGVRHI 388
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
V CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ + + + MNTH+ PE+V+SF+
Sbjct: 389 VFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIYPEFVVSFK 448
Query: 219 IPPTGRAVNVAAARE--------------------------------PSRPKSPWVPFPA 246
+ + + R+ P SP PF
Sbjct: 449 VSSDAEGLLLGCERKNNIFGVNSASYGPKILPRSESSRVSTGIPTGSPEASTSPRFPFST 508
Query: 247 LISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLL 293
L +A+ +P DM ++ +R K++R ++ LR + GD LL
Sbjct: 509 LFAAIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLRSVVGDDLL 555
>Medtr5g032190.1 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr5:13829161-13836239 | 20130731
Length = 573
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 151/319 (47%), Gaps = 50/319 (15%)
Query: 33 VSGGEVIVRADVRSLESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFAR 92
V V VR D L++V + F+ G S +V I F + + +R++ F+ A
Sbjct: 256 VGSAVVYVRLD---LDTVQKMFLKGTSSFGS-ADIVEIY--PFSSTMMLSRLELFEKQAE 309
Query: 93 ATAQLRHGNANVKHAWYSVSGMEEILEILQHGFGH--------DHHRGLRLSPEDSPHLS 144
T R G+AN+++AW + S E+ +++ G GH H G+ L+ P S
Sbjct: 310 ITKNCR-GDANIQYAWLA-SSKGELSTMMKCGLGHCGISTSKCTHGFGVHLAAATFPFAS 367
Query: 145 VRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNR 204
D++G+RHLV CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ Y + +
Sbjct: 368 ASHCDIDENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMN 427
Query: 205 MNTHVLPEYVLSFRIPPTGRAV--------NVAAAREPSR-------------------- 236
NTH+ PEYV+SF++ + N+ SR
Sbjct: 428 TNTHICPEYVVSFKVSSATEGLLLGSKTKNNIFGVNSASRSPKILSRSESSTVDTGIASG 487
Query: 237 ----PKSPWVPFPALISALSKILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIA-GDK 291
P SP +PFP LI AL + DM ++ +R +++R +KLR+I D
Sbjct: 488 SRRGPTSPSMPFPVLIDALKNKVSAKDMEVINMHYLQFRAKRMTRDDFAKKLRLIVRDDA 547
Query: 292 LLFQVIKSFREKLQKPPPS 310
LL I + K+ P PS
Sbjct: 548 LLRATIVGLQSKM-PPQPS 565
>Medtr5g029580.1 | inactive poly [ADP-ribose] polymerase SRO4 | LC |
chr5:12416462-12413704 | 20130731
Length = 364
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 145/280 (51%), Gaps = 37/280 (13%)
Query: 47 LESVGRRFIDGLGPLAS-RIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVK 105
++SV R F+ G+ L +V + RN ++ Q R+D F++ T +++ G+ANV+
Sbjct: 63 VDSVQRMFLTGMTFLGFIESDIVEVYRNSGKSM--QIRLDLFKMQVDITKEVK-GDANVR 119
Query: 106 HAWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRH 157
+AW++ S EE+ +++HGF H + G+ L+ P++ D++G ++
Sbjct: 120 YAWFA-SSKEELSTMMEHGFSHYELSPPKCLYGFGVHLATLPHPYVCSLFCDVDENGTKY 178
Query: 158 LVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSF 217
LVLCRVI+ ME++ P SDQ R EYD+GVD++ PK Y + + +NTH+ PE+V+ F
Sbjct: 179 LVLCRVIMENMELLRPNSDQVRPSGYEYDNGVDNIQCPKYYVVWNININTHIYPEFVVRF 238
Query: 218 R--IPPTGRAVNVAAAR------------------EPSR----PKSPWVPFPALISALSK 253
+ + G N+ PS PKSPW F L+ A+
Sbjct: 239 KSSLEAEGDVTNIFIYYLYIQPIYVCGMPQGKDFSTPSNNRRIPKSPWTSFRTLLDAIRN 298
Query: 254 ILPQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLL 293
++P + M + + KISR + ++K+R I GD ++
Sbjct: 299 MVPSNIMDQITGYYEKLVTKKISRDEFVRKMRFIVGDNIM 338
>Medtr7g011550.1 | inactive poly [ADP-ribose] polymerase RCD1 | LC |
chr7:3130244-3127740 | 20130731
Length = 547
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 47 LESVGRRFIDGLGPLA-SRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVK 105
+ S + F+ G+ L S +V I R+ ++ Q R+ F+ A +R G AN++
Sbjct: 250 VNSTQKMFLKGMSSLGISESDIVGIYRSSGRSM--QMRLQLFEKQADIIKGIR-GVANIR 306
Query: 106 HAWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRH 157
+AW + S EEI ++++ H + G+ L+ P + D +G++H
Sbjct: 307 YAWLACSK-EEISTMMEYELSHYELSPSKCIYGPGVHLAAITHPFVCSLSCDEDGNGIKH 365
Query: 158 LVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSF 217
+ LCRVI+G ME++ P S Q R EYD+GVDD+ PK Y + + MNTH+ PE+V+SF
Sbjct: 366 MFLCRVIMGNMELLRPSSKQLRPSDCEYDNGVDDIQCPKCYVVWNMNMNTHIYPEFVVSF 425
Query: 218 RIPPTGRAVNVAAAREPSR----------------------PKSPWVPFPALISALSKIL 255
+ P G N+ + + P S VPF L+S+L ++
Sbjct: 426 K-SPLGFEENICSNESKKQGYRHSILDTVKATGVPANIRRTPGSASVPFSVLLSSLRNMV 484
Query: 256 PQHDMAIVLKLQKDYREMKISRQQMIQKLRVIAGDKLLFQVIKSFREKLQKPP 308
P + M ++ KISR + KLR+I + +L + + + K +PP
Sbjct: 485 PSNIMFLLDAQYALLMSNKISRGDCVLKLRLIVANNVLKSAVYNVQSK--RPP 535
>Medtr1g112330.5 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr1:50854983-50849523 | 20130731
Length = 460
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 13/181 (7%)
Query: 47 LESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKH 106
L++V + F+ G G S +V I F + + Q+R++ F+ A R G+ANV++
Sbjct: 274 LDTVQKMFLKGTGSFGSAY-IVEIY--PFSSTLVQSRLELFEKQAEIAKNCR-GDANVRY 329
Query: 107 AWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
AW + S E+ +++ G GH H G+ L+ P S D++G+RH+
Sbjct: 330 AWLA-SSKGELPTMMKCGLGHCVPSAPKCMHGIGVHLAAATCPFASASYCDVDENGVRHI 388
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
V CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ + + + MNTH+ PE+V+SF+
Sbjct: 389 VFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIYPEFVVSFK 448
Query: 219 I 219
+
Sbjct: 449 V 449
>Medtr1g112330.4 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr1:50854983-50850437 | 20130731
Length = 460
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 13/181 (7%)
Query: 47 LESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKH 106
L++V + F+ G G S +V I F + + Q+R++ F+ A R G+ANV++
Sbjct: 274 LDTVQKMFLKGTGSFGSAY-IVEIY--PFSSTLVQSRLELFEKQAEIAKNCR-GDANVRY 329
Query: 107 AWYSVSGMEEILEILQHGFGHD--------HHRGLRLSPEDSPHLSVRRSVADKDGLRHL 158
AW + S E+ +++ G GH H G+ L+ P S D++G+RH+
Sbjct: 330 AWLA-SSKGELPTMMKCGLGHCVPSAPKCMHGIGVHLAAATCPFASASYCDVDENGVRHI 388
Query: 159 VLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVLPEYVLSFR 218
V CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ + + + MNTH+ PE+V+SF+
Sbjct: 389 VFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIYPEFVVSFK 448
Query: 219 I 219
+
Sbjct: 449 V 449
>Medtr5g032190.3 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr5:13829161-13836239 | 20130731
Length = 482
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 16/195 (8%)
Query: 33 VSGGEVIVRADVRSLESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFAR 92
V V VR D L++V + F+ G S +V I F + + +R++ F+ A
Sbjct: 256 VGSAVVYVRLD---LDTVQKMFLKGTSSFGS-ADIVEIY--PFSSTMMLSRLELFEKQAE 309
Query: 93 ATAQLRHGNANVKHAWYSVSGMEEILEILQHGFGH--------DHHRGLRLSPEDSPHLS 144
T R G+AN+++AW + S E+ +++ G GH H G+ L+ P S
Sbjct: 310 ITKNCR-GDANIQYAWLA-SSKGELSTMMKCGLGHCGISTSKCTHGFGVHLAAATFPFAS 367
Query: 145 VRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNR 204
D++G+RHLV CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ Y + +
Sbjct: 368 ASHCDIDENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMN 427
Query: 205 MNTHVLPEYVLSFRI 219
NTH+ PEYV+SF++
Sbjct: 428 TNTHICPEYVVSFKV 442
>Medtr5g032190.2 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
chr5:13829161-13836239 | 20130731
Length = 488
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 16/195 (8%)
Query: 33 VSGGEVIVRADVRSLESVGRRFIDGLGPLASRIQVVSIRRNKFPTVISQARVDSFQIFAR 92
V V VR D L++V + F+ G S +V I F + + +R++ F+ A
Sbjct: 256 VGSAVVYVRLD---LDTVQKMFLKGTSSFGS-ADIVEIY--PFSSTMMLSRLELFEKQAE 309
Query: 93 ATAQLRHGNANVKHAWYSVSGMEEILEILQHGFGH--------DHHRGLRLSPEDSPHLS 144
T R G+AN+++AW + S E+ +++ G GH H G+ L+ P S
Sbjct: 310 ITKNCR-GDANIQYAWLA-SSKGELSTMMKCGLGHCGISTSKCTHGFGVHLAAATFPFAS 367
Query: 145 VRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNR 204
D++G+RHLV CRVI+G ME++ PG+ Q R S +YDSGVDD+ +P+ Y + +
Sbjct: 368 ASHCDIDENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMN 427
Query: 205 MNTHVLPEYVLSFRI 219
NTH+ PEYV+SF++
Sbjct: 428 TNTHICPEYVVSFKV 442
>Medtr7g011880.1 | RCD1-SRO-TAF4 (RST) plant domain protein | LC |
chr7:3291067-3292090 | 20130731
Length = 193
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 150 ADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHV 209
DK+ + + C V + P + Q R EYD+GV DV PK Y + MNTH+
Sbjct: 60 VDKNVFKMIKQCNV----AKCYRPNTKQLRPSGCEYDNGVVDVQRPKCYVVWIMNMNTHI 115
Query: 210 LPEYVLSFRIPPTGRAVNVAAA-----REPSRPKSPWVPFPALISALSKILPQHDMAIV 263
PE+V+SF+ PP V + R PS + P +PF L+S++ I+P H M ++
Sbjct: 116 YPEFVVSFK-PPKVDTVKSTSVPPNIIRTPSFAQRPPMPFSVLLSSMRNIVPSHTMFLI 173
>Medtr2g090130.1 | inactive poly [ADP-ribose] polymerase RCD1,
putative | LC | chr2:38210616-38209507 | 20130731
Length = 217
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 32/143 (22%)
Query: 54 FIDGLGPLA-SRIQVVSIRRNKFPTVISQARVDSFQIFARATAQLRHGNANVKHAWYSVS 112
F+ G+ L + +V I N +++ Q R++ FQ A T ++ G ANV++AW + S
Sbjct: 106 FLIGMTILGITESDIVDIYCN--SSMLMQTRLELFQKQADLTNGIQ-GEANVRYAWIACS 162
Query: 113 GMEEILEILQHGFGHDHHRGLRLSPEDSPHLSVRRSVADKDGLRHLVLCRVILGRMEVVS 172
E LS+ V D+DG+++LVLCRV +G+ME++
Sbjct: 163 KDE---------------------------LSLYCDV-DEDGIKYLVLCRVKMGKMELLR 194
Query: 173 PGSDQCRSISDEYDSGVDDVSSP 195
P +DQ S EY++ VDD+ SP
Sbjct: 195 PSNDQRCSSGYEYENEVDDIQSP 217
>Medtr1g011730.1 | RCD one-like protein, putative | LC |
chr1:2205465-2204067 | 20130731
Length = 102
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 138 EDSPHLSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKE 197
++SP + DKD L+H+++C+V+LG +E V Q + +E+D+G DD PK
Sbjct: 22 KESPQHRSMQYKVDKDPLKHIIICQVVLGSVEKVELEFHQSCASRNEFDTGSDD---PKW 78
Query: 198 YFIRSNRMNTHVLP 211
Y + +N +N +LP
Sbjct: 79 YVVWANDINNRILP 92