Miyakogusa Predicted Gene

Lj4g3v1479290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1479290.1 Non Characterized Hit- tr|C5WRZ3|C5WRZ3_SORBI
Putative uncharacterized protein Sb01g000700
OS=Sorghu,29.95,3e-19,PARP_CATALYTIC,Poly(ADP-ribose) polymerase,
catalytic domain; ADP-ribosylation,NULL; RST,RST domain ,CUFF.49311.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g105740.2 | inactive poly [ADP-ribose] polymerase SRO4 | H...   132   3e-31
Medtr4g105740.1 | inactive poly [ADP-ribose] polymerase SRO4 | H...   131   3e-31
Medtr3g077870.1 | inactive poly [ADP-ribose] polymerase SRO4 | H...   112   2e-25
Medtr5g032190.1 | inactive poly [ADP-ribose] polymerase RCD1 | H...   102   3e-22
Medtr1g112330.1 | inactive poly [ADP-ribose] polymerase RCD1 | H...    96   2e-20
Medtr1g112330.2 | inactive poly [ADP-ribose] polymerase RCD1 | H...    96   2e-20
Medtr1g112330.3 | inactive poly [ADP-ribose] polymerase RCD1 | H...    95   3e-20
Medtr7g011550.1 | inactive poly [ADP-ribose] polymerase RCD1 | L...    87   1e-17
Medtr5g032190.2 | inactive poly [ADP-ribose] polymerase RCD1 | H...    87   1e-17
Medtr5g032190.3 | inactive poly [ADP-ribose] polymerase RCD1 | H...    87   1e-17
Medtr1g112330.5 | inactive poly [ADP-ribose] polymerase RCD1 | H...    87   1e-17
Medtr1g112330.4 | inactive poly [ADP-ribose] polymerase RCD1 | H...    87   1e-17
Medtr8g088250.1 | inactive poly [ADP-ribose] polymerase SRO2, pu...    86   2e-17
Medtr5g029580.1 | inactive poly [ADP-ribose] polymerase SRO4 | L...    84   1e-16
Medtr7g011880.1 | RCD1-SRO-TAF4 (RST) plant domain protein | LC ...    57   7e-09
Medtr2g090130.1 | inactive poly [ADP-ribose] polymerase RCD1, pu...    54   1e-07
Medtr1g011730.1 | RCD one-like protein, putative | LC | chr1:220...    51   7e-07

>Medtr4g105740.2 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
           chr4:43896318-43900298 | 20130731
          Length = 310

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 92/163 (56%), Gaps = 33/163 (20%)

Query: 4   LYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIR 63
           L SV+R+V DK G RHL+LCRVI+G++E V  GSDQ R  S+E+DSGVD  SSPKE+ + 
Sbjct: 142 LESVKRTVVDKQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEFDSGVDSFSSPKEFIVW 201

Query: 64  SNRMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNV 123
           SN++NTHVLPEYVLSF++                                         V
Sbjct: 202 SNKINTHVLPEYVLSFKLASDKGH---------------------------------EKV 228

Query: 124 AAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
               +  RP SP++ FP LISALSKILP  D+  + K  K+YR
Sbjct: 229 GVGGQHMRPSSPFMQFPTLISALSKILPPSDIVSIAKFHKEYR 271


>Medtr4g105740.1 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
           chr4:43896289-43900298 | 20130731
          Length = 325

 Score =  131 bits (330), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 92/163 (56%), Gaps = 33/163 (20%)

Query: 4   LYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIR 63
           L SV+R+V DK G RHL+LCRVI+G++E V  GSDQ R  S+E+DSGVD  SSPKE+ + 
Sbjct: 142 LESVKRTVVDKQGFRHLLLCRVIMGKLEAVPAGSDQRRPSSEEFDSGVDSFSSPKEFIVW 201

Query: 64  SNRMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNV 123
           SN++NTHVLPEYVLSF++                                         V
Sbjct: 202 SNKINTHVLPEYVLSFKLASDKGH---------------------------------EKV 228

Query: 124 AAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKLQKDYR 166
               +  RP SP++ FP LISALSKILP  D+  + K  K+YR
Sbjct: 229 GVGGQHMRPSSPFMQFPTLISALSKILPPSDIVSIAKFHKEYR 271


>Medtr3g077870.1 | inactive poly [ADP-ribose] polymerase SRO4 | HC |
           chr3:35056982-35060567 | 20130731
          Length = 327

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 93/173 (53%), Gaps = 40/173 (23%)

Query: 4   LYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIR 63
           L SV+     +DG+RHL+LCRVILGR E+V   + QC     +YDSGVD  S+P +Y I 
Sbjct: 155 LQSVKSCAVGRDGVRHLILCRVILGRTEIVQADTKQCYPSCADYDSGVDSFSAPTKYMIW 214

Query: 64  SNRMNTHVLPEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNV 123
           S+RMNTHV P YVLSF+         V SL                         +AV +
Sbjct: 215 SSRMNTHVWPAYVLSFK---------VSSL-------------------------KAVEI 240

Query: 124 AAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLKL---QKDYRVSASDLL 173
                  RP SP VPFP LIS LSK+ PQ D+A++ K    +K+ ++S  +L+
Sbjct: 241 EGY---GRPTSPSVPFPTLISMLSKVSPQLDIALICKFYKARKEKKISRHELI 290


>Medtr5g032190.1 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr5:13829161-13836239 | 20130731
          Length = 573

 Score =  102 bits (253), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RHLV CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ Y + +   NTH+ 
Sbjct: 374 DENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMNTNTHIC 433

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSR- 131
           PEYV+SF++  +   G +      +  F +  S  +   I S      V+   A    R 
Sbjct: 434 PEYVVSFKV-SSATEGLLLGSKTKNNIFGV-NSASRSPKILSRSESSTVDTGIASGSRRG 491

Query: 132 PKSPWVPFPALISALSKILPQHDMAIV 158
           P SP +PFP LI AL   +   DM ++
Sbjct: 492 PTSPSMPFPVLIDALKNKVSAKDMEVI 518


>Medtr1g112330.1 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr1:50855008-50849523 | 20130731
          Length = 569

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RH+V CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ + + +  MNTH+ 
Sbjct: 381 DENGVRHIVFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIY 440

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSRP 132
           PE+V+SF++      G +      +  F + ++     I+      R         P   
Sbjct: 441 PEFVVSFKVSSDAE-GLLLGCERKNNIFGVNSASYGPKILPRSESSRVSTGIPTGSPEAS 499

Query: 133 KSPWVPFPALISALSKILPQHDMAIVLKLQKDYRVS--ASDLLLWSLR 178
            SP  PF  L +A+   +P  DM ++      +R      D  L +LR
Sbjct: 500 TSPRFPFSTLFAAIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLR 547


>Medtr1g112330.2 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr1:50855008-50849518 | 20130731
          Length = 569

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 3/168 (1%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RH+V CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ + + +  MNTH+ 
Sbjct: 381 DENGVRHIVFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIY 440

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSRP 132
           PE+V+SF++      G +      +  F + ++     I+      R         P   
Sbjct: 441 PEFVVSFKVSSDAE-GLLLGCERKNNIFGVNSASYGPKILPRSESSRVSTGIPTGSPEAS 499

Query: 133 KSPWVPFPALISALSKILPQHDMAIVLKLQKDYRVS--ASDLLLWSLR 178
            SP  PF  L +A+   +P  DM ++      +R      D  L +LR
Sbjct: 500 TSPRFPFSTLFAAIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLR 547


>Medtr1g112330.3 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr1:50854983-50849518 | 20130731
          Length = 566

 Score = 95.1 bits (235), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 6/168 (3%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RH+V CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ + + +  MNTH+ 
Sbjct: 381 DENGVRHIVFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIY 440

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSRP 132
           PE+V+SF++      G +      +  F + ++     I+      R +   +   P   
Sbjct: 441 PEFVVSFKVSSDAE-GLLLGCERKNNIFGVNSASYGPKILPRSESSRGIPTGS---PEAS 496

Query: 133 KSPWVPFPALISALSKILPQHDMAIVLKLQKDYRVS--ASDLLLWSLR 178
            SP  PF  L +A+   +P  DM ++      +R      D  L +LR
Sbjct: 497 TSPRFPFSTLFAAIINKVPAEDMKLIHMYHLHFRAKKMTRDDFLKNLR 544


>Medtr7g011550.1 | inactive poly [ADP-ribose] polymerase RCD1 | LC |
           chr7:3130244-3127740 | 20130731
          Length = 547

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 16/145 (11%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D +G++H+ LCRVI+G ME++ P S Q R    EYD+GVDD+  PK Y + +  MNTH+ 
Sbjct: 359 DGNGIKHMFLCRVIMGNMELLRPSSKQLRPSDCEYDNGVDDIQCPKCYVVWNMNMNTHIY 418

Query: 73  PEYVLSFRIPPTGLFGWVCSL--CWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPS 130
           PE+V+SF+  P G    +CS       Y   I  +V            +A  V A    +
Sbjct: 419 PEFVVSFK-SPLGFEENICSNESKKQGYRHSILDTV------------KATGVPANIRRT 465

Query: 131 RPKSPWVPFPALISALSKILPQHDM 155
            P S  VPF  L+S+L  ++P + M
Sbjct: 466 -PGSASVPFSVLLSSLRNMVPSNIM 489


>Medtr5g032190.2 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr5:13829161-13836239 | 20130731
          Length = 488

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 53/69 (76%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RHLV CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ Y + +   NTH+ 
Sbjct: 374 DENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMNTNTHIC 433

Query: 73  PEYVLSFRI 81
           PEYV+SF++
Sbjct: 434 PEYVVSFKV 442


>Medtr5g032190.3 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr5:13829161-13836239 | 20130731
          Length = 482

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 53/69 (76%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RHLV CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ Y + +   NTH+ 
Sbjct: 374 DENGVRHLVFCRVIMGNMELLRPGTRQFRPSSSDYDSGVDDIHNPRYYIVWNMNTNTHIC 433

Query: 73  PEYVLSFRI 81
           PEYV+SF++
Sbjct: 434 PEYVVSFKV 442


>Medtr1g112330.5 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr1:50854983-50849523 | 20130731
          Length = 460

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 54/69 (78%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RH+V CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ + + +  MNTH+ 
Sbjct: 381 DENGVRHIVFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIY 440

Query: 73  PEYVLSFRI 81
           PE+V+SF++
Sbjct: 441 PEFVVSFKV 449


>Medtr1g112330.4 | inactive poly [ADP-ribose] polymerase RCD1 | HC |
           chr1:50854983-50850437 | 20130731
          Length = 460

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 54/69 (78%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G+RH+V CRVI+G ME++ PG+ Q R  S +YDSGVDD+ +P+ + + +  MNTH+ 
Sbjct: 381 DENGVRHIVFCRVIMGNMELLHPGTRQYRPSSSDYDSGVDDIHNPRNFIVWNMNMNTHIY 440

Query: 73  PEYVLSFRI 81
           PE+V+SF++
Sbjct: 441 PEFVVSFKV 449


>Medtr8g088250.1 | inactive poly [ADP-ribose] polymerase SRO2,
           putative | HC | chr8:36541903-36539541 | 20130731
          Length = 290

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 43/162 (26%)

Query: 2   WALYSVRRSVADKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYF 61
           +++ S   +VAD++GLRH++LC+VILGR+E V   S Q +    +YD+GVDD+SSP+++ 
Sbjct: 126 FSIDSAMSTVADENGLRHVLLCKVILGRVENVPVDSKQSQPSCRQYDTGVDDISSPRKHI 185

Query: 62  IRSNRMNTHVLPEYVLSFR---IPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVG 118
           I +  MN+H+ PEY++SF    +   G+FG +                            
Sbjct: 186 IWTAFMNSHIHPEYIVSFNYNYVKDQGVFGTL---------------------------- 217

Query: 119 RAVNVAAAREPSRPKSPWVPFPALISALSKILPQHDMAIVLK 160
                       +P+S +V  P L++ +S  L    M+++LK
Sbjct: 218 ------------KPQSEYVLLPNLVAKVSNHLKPSQMSLLLK 247


>Medtr5g029580.1 | inactive poly [ADP-ribose] polymerase SRO4 | LC |
           chr5:12416462-12413704 | 20130731
          Length = 364

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 11/144 (7%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           D++G ++LVLCRVI+  ME++ P SDQ R    EYD+GVD++  PK Y + +  +NTH+ 
Sbjct: 172 DENGTKYLVLCRVIMENMELLRPNSDQVRPSGYEYDNGVDNIQCPKYYVVWNININTHIY 231

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSR- 131
           PE+V+ F+           SL        I    + I  I+   + +  + +      R 
Sbjct: 232 PEFVVRFK----------SSLEAEGDVTNIFIYYLYIQPIYVCGMPQGKDFSTPSNNRRI 281

Query: 132 PKSPWVPFPALISALSKILPQHDM 155
           PKSPW  F  L+ A+  ++P + M
Sbjct: 282 PKSPWTSFRTLLDAIRNMVPSNIM 305


>Medtr7g011880.1 | RCD1-SRO-TAF4 (RST) plant domain protein | LC |
           chr7:3291067-3292090 | 20130731
          Length = 193

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 33/146 (22%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
           DK+  + +  C V     +   P + Q R    EYD+GV DV  PK Y +    MNTH+ 
Sbjct: 61  DKNVFKMIKQCNV----AKCYRPNTKQLRPSGCEYDNGVVDVQRPKCYVVWIMNMNTHIY 116

Query: 73  PEYVLSFRIPPTGLFGWVCSLCWSSYCFIICASVVKILIIFSIFVGRAVNVAAAREPSRP 132
           PE+V+SF+ P                         K+  + S  V   +     R PS  
Sbjct: 117 PEFVVSFKPP-------------------------KVDTVKSTSVPPNI----IRTPSFA 147

Query: 133 KSPWVPFPALISALSKILPQHDMAIV 158
           + P +PF  L+S++  I+P H M ++
Sbjct: 148 QRPPMPFSVLLSSMRNIVPSHTMFLI 173


>Medtr2g090130.1 | inactive poly [ADP-ribose] polymerase RCD1,
           putative | LC | chr2:38210616-38209507 | 20130731
          Length = 217

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 35/45 (77%)

Query: 13  DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSP 57
           D+DG+++LVLCRV +G+ME++ P +DQ  S   EY++ VDD+ SP
Sbjct: 173 DEDGIKYLVLCRVKMGKMELLRPSNDQRCSSGYEYENEVDDIQSP 217


>Medtr1g011730.1 | RCD one-like protein, putative | LC |
          chr1:2205465-2204067 | 20130731
          Length = 102

 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 3/61 (4%)

Query: 13 DKDGLRHLVLCRVILGRMEVVSPGSDQCRSISDEYDSGVDDVSSPKEYFIRSNRMNTHVL 72
          DKD L+H+++C+V+LG +E V     Q  +  +E+D+G DD   PK Y + +N +N  +L
Sbjct: 35 DKDPLKHIIICQVVLGSVEKVELEFHQSCASRNEFDTGSDD---PKWYVVWANDINNRIL 91

Query: 73 P 73
          P
Sbjct: 92 P 92