Miyakogusa Predicted Gene

Lj4g3v1474090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1474090.1 Non Characterized Hit- tr|A5BNW9|A5BNW9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.05,0.0000000007,seg,NULL,CUFF.49284.1
         (337 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g105500.1 | embryo defective 2759 protein, putative | HC |...   451   e-127
Medtr3g077490.1 | embryo defective 2759 protein | HC | chr3:3480...   369   e-102

>Medtr4g105500.1 | embryo defective 2759 protein, putative | HC |
           chr4:43783097-43786202 | 20130731
          Length = 352

 Score =  451 bits (1159), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/337 (66%), Positives = 258/337 (76%), Gaps = 1/337 (0%)

Query: 2   ALIAHQPQGLYVTFSSRDLPWNKRLKLKQCLSKHHLIGRADFHCILKRSITLSVGPSHTY 61
            L+     GL VTFS+R+LPWNKRLKLKQCL+KHHLIGRAD+H +LK++  LSVGP H  
Sbjct: 16  TLLGSIGAGLNVTFSTRNLPWNKRLKLKQCLTKHHLIGRADWHHMLKQTTCLSVGPPHIC 75

Query: 62  GSKFKPLRIAAFKGSAQNDNSVNRANGLKVPKSSVRLEENGEIKSESPKA-DVQXXXXXX 120
           GSKF PL I AFKGS QND+S+ R NGLKV K+SVR+EE G +KS+SPK  +V       
Sbjct: 76  GSKFTPLTITAFKGSDQNDDSIRRDNGLKVRKTSVRVEEKGGVKSKSPKTRNVPLPSASD 135

Query: 121 XXXXXXXXXGINKLFKKWLTMLRTPPSNQGVEDILGEPPPEVLPETPQGMQRTEKDQILK 180
                    G++KLFKKWLT+L +PPSNQ VE+ILGEPPP  LPET QGMQR EK Q LK
Sbjct: 136 ADESLAASSGVHKLFKKWLTILCSPPSNQRVEEILGEPPPGGLPETSQGMQRIEKSQTLK 195

Query: 181 VAWSKILALDATLKIPFLIFAPFFVAVNVTYGAEVSKELTPLWVLGPLVVALYIMIVRWL 240
           V WS   ALDAT+KIP LIFAPFF+AVN  YG EVSKELTPLWV+GP +VALYI +V+ L
Sbjct: 196 VVWSTFQALDATIKIPLLIFAPFFLAVNAIYGPEVSKELTPLWVMGPFIVALYIKMVQVL 255

Query: 241 CALYVFTFKQTVKVLKNSPSYCILAFSYVFYGKLKEDIKVHFLQPILNIKNMDYXXXXXX 300
           CALYV++FKQTVKV+K+ PS+C LA +YVF GK+KEDIKVH LQPILNIKN DY      
Sbjct: 256 CALYVYSFKQTVKVIKSLPSFCKLAHNYVFDGKIKEDIKVHILQPILNIKNADYKQLTIK 315

Query: 301 XXXXXXXWIREKYLDYVESIWPYYCRTIRFLKRANLI 337
                  WI EKYLD+VESIWPYYCRTIRFLKR+NLI
Sbjct: 316 LLKVLAEWIGEKYLDFVESIWPYYCRTIRFLKRSNLI 352


>Medtr3g077490.1 | embryo defective 2759 protein | HC |
           chr3:34806841-34810528 | 20130731
          Length = 332

 Score =  369 bits (946), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/338 (54%), Positives = 233/338 (68%), Gaps = 7/338 (2%)

Query: 1   MALIAHQPQGLYVTFSSRDLPWNKRLKLKQCLSKHHLIGRADFHCILKRSITLSVGPSHT 60
           MA +AHQPQGLYVT S+R L W+KR+KLKQCL+KHH+IGR D+H +LK++I LSVGP   
Sbjct: 1   MAFVAHQPQGLYVTSSTRHLSWSKRMKLKQCLTKHHMIGRTDWHHLLKQNICLSVGPPCF 60

Query: 61  YGSKFKPLRIAAFKGSAQNDNSVNRANGLKVPKSSVRLEENGEIKSESPKADVQXXXXXX 120
             SK KPLRI+ F+G  QNDNS +RAN L+ PK+SV LEE+G+        +V       
Sbjct: 61  CVSKIKPLRISCFQGRTQNDNSGSRANWLRAPKTSVGLEESGDTH------NVPFSYASE 114

Query: 121 XXXXXXXXXGINKLFKKWLTMLRTPPSNQGVEDILGEPP-PEVLPETPQGMQRTEKDQIL 179
                      + LFKKWL MLRT  S Q VE++ G P  P VLPET Q     +  ++L
Sbjct: 115 AGDNLATSSAFHGLFKKWLKMLRTQSSCQEVEEVFGRPTTPTVLPETLQMTHSKDGSEVL 174

Query: 180 KVAWSKILALDATLKIPFLIFAPFFVAVNVTYGAEVSKELTPLWVLGPLVVALYIMIVRW 239
           K+A S  LALDA + IP LIF P ++AVNV YGAEVSKELTPLWV GPL+VAL+I+I+R 
Sbjct: 175 KLALSHFLALDAAITIPLLIFVPLYLAVNVKYGAEVSKELTPLWVFGPLIVALHIIIIRG 234

Query: 240 LCALYVFTFKQTVKVLKNSPSYCILAFSYVFYGKLKEDIKVHFLQPILNIKNMDYXXXXX 299
           LCALY  +F +TV++L+  PS+CILA  Y+F G LKE I V+ L+PI ++K++DY     
Sbjct: 235 LCALYASSFNRTVEILRKVPSWCILANYYIFGGGLKEQIAVYLLRPISSLKHIDYIQLTR 294

Query: 300 XXXXXXXXWIREKYLDYVESIWPYYCRTIRFLKRANLI 337
                   W+ +KYLDYVESIWPYYCR IRFLK +NLI
Sbjct: 295 RILKVLQEWLMDKYLDYVESIWPYYCRAIRFLKTSNLI 332