Miyakogusa Predicted Gene

Lj4g3v1464060.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1464060.1 Non Characterized Hit- tr|D7M2X3|D7M2X3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30,6e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.49293.1
         (533 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g098710.1 | hypothetical protein | HC | chr5:43209592-4320...   462   e-130
Medtr5g065900.1 | plant/MNA5-17 protein | HC | chr5:27742268-277...    94   3e-19
Medtr6g006810.1 | hypothetical protein | LC | chr6:1216250-12172...    55   2e-07

>Medtr5g098710.1 | hypothetical protein | HC |
           chr5:43209592-43201557 | 20130731
          Length = 1198

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 291/540 (53%), Positives = 331/540 (61%), Gaps = 65/540 (12%)

Query: 2   MFTEGLDETAIQWINQGSK--LPLEEPPIRSPLTVKDTTDRFPRSPLLSTANSL--NSPV 57
           MFTEGLDETA+QWIN+ S+  + +EE   RSPLT  D     PRSPL ++ N+L   SP 
Sbjct: 1   MFTEGLDETALQWINKVSQQQVQVEECTTRSPLT--DKKSPLPRSPLFASNNNLTPKSPS 58

Query: 58  LPPLKFHSALLTPRNLAFGFNGXXXXXXXXXXXXXXXXTNF----TXXXXXXXEVVSHSA 113
           LPPLKF+S+LL   NLAFGFN                  +             E      
Sbjct: 59  LPPLKFNSSLLPRINLAFGFNHNDSVSDDDDDDDDDESVDSLSCPAAETDDENEEDQRIL 118

Query: 114 SNLDY-----LDEDQLFGCKQ--PQQNPKPSGRNNGILRKGLVNENLSVQVPNTV--RRF 164
            NLD       DE+QLFG       +  KPSG    ILRKGLVNE L +QVPN+V  RRF
Sbjct: 119 DNLDTPIAQCYDEEQLFGFGNGTKYKTLKPSG----ILRKGLVNETLIIQVPNSVNARRF 174

Query: 165 TDGGDLGFKK---KIMTPXXXXXXXXXXXIQLQKHVHLHNQNLNCLDDPAELATPSAPPA 221
           TDG +LGF K   K MTP           ++ Q        N + L+D  +LATPSAPP 
Sbjct: 175 TDG-ELGFNKCVQKKMTPCGSEIGTAGRGVRFQ--------NTSNLNDSVDLATPSAPPI 225

Query: 222 PITD---------ADFSLENEPDHHG--------IGSSVDCD--GRRSESSVEQTPSAVA 262
            I           ++ S+ NE D              SV+CD  G RSE S+EQ P+ VA
Sbjct: 226 FIDGEGGEGDVHYSEGSVANEVDEMTQQDRRSWQSRDSVNCDDGGGRSECSIEQKPNTVA 285

Query: 263 KDPDIVQRQDTTFTQDMERQ--PPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKG 320
                 + Q+TT TQ MERQ  PPHLQ  N S C+SQ AWQTLITYDACIRLCLQ+WA+G
Sbjct: 286 ------ESQETTSTQGMERQAPPPHLQYLNNS-CSSQDAWQTLITYDACIRLCLQAWARG 338

Query: 321 CTEAPEFLKDECLALRAAFGLHEFLLQPRGVKPPEGISTRPSEQTIPLKMNKAVGKIRVE 380
           CTEAPEFLKDECLALR+AFGLHEFLLQPRG+KP EG STR SEQT+PLK  K VGKIRVE
Sbjct: 339 CTEAPEFLKDECLALRSAFGLHEFLLQPRGIKPTEG-STRNSEQTVPLKTKKVVGKIRVE 397

Query: 381 VXXXXXXXXXXXXSANSQQGGSIYMQAGMDYVRQVSSIVKXXXXXXXXXXXXXXXEEPLY 440
           V               S +G S+Y QAGM+YVR VSSIVK               EEPLY
Sbjct: 398 VKKLRIIQRRKLKGTFSNRG-SMYKQAGMEYVRHVSSIVKSGINSIKSASFSVTEEEPLY 456

Query: 441 CLLQLKSATEENESESCSAIFLRPGNRDYHDFFPLSQGDALLVEVQDSKKTVHGEARIPI 500
           CL+QLKSATEENESESCSAIFLRPG+ DYHDFFPLSQGDALLVEVQDSKK VHGEARIPI
Sbjct: 457 CLIQLKSATEENESESCSAIFLRPGSGDYHDFFPLSQGDALLVEVQDSKKGVHGEARIPI 516


>Medtr5g065900.1 | plant/MNA5-17 protein | HC |
           chr5:27742268-27750205 | 20130731
          Length = 1230

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 107/260 (41%), Gaps = 46/260 (17%)

Query: 282 QPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKGCTEAPEFLKDECLALRAAFGL 341
           QPP L  ++ S       W  +I YDAC RLCL +WA  C EAP FL++EC  LR AFGL
Sbjct: 299 QPPRLPTFHASALG---PWYAVIAYDACARLCLHAWAMQCMEAPMFLENECSLLRDAFGL 355

Query: 342 HEFLLQPR--------GVKPPEGISTRPSEQTIPLKMNKAVGKIRVEVXXXXXXXXXXXX 393
            + LLQP         G    EG++  P  + +  KM   V K++V V            
Sbjct: 356 RQVLLQPEEELMVKCNGELSSEGVA--PKLKKLIGKMKVQVRKVKVGVDPPTGCSMSSIV 413

Query: 394 SANSQQGGSIY--------MQAGMDYVRQVSSI------VKXXXXXXXXXXXXXXXEEPL 439
           +   +     Y        + +G   +R+V  +                        + +
Sbjct: 414 THKIKMDSMQYHFSNLQSKLSSGWHALRKVRFVPHLPANGSLTHKSLAYVHASTRYIQQV 473

Query: 440 YCLLQLKSATEENESESCSAI------FLR-------------PGNRDYHDFFPLSQGDA 480
             LL++   T  N S S  A+      FLR             PG+ + H FFP S GD 
Sbjct: 474 SGLLKVGVTTLRNSSSSYEAVQETFTCFLRLKSVVEEDAIRLQPGSSEVHMFFPDSLGDD 533

Query: 481 LLVEVQDSKKTVHGEARIPI 500
           LL+EVQDSK    G   + +
Sbjct: 534 LLIEVQDSKGKHFGRVLVQV 553


>Medtr6g006810.1 | hypothetical protein | LC | chr6:1216250-1217218
           | 20130731
          Length = 186

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 32/207 (15%)

Query: 264 DPDIVQRQDTTFTQDMERQPPHLQCYNTSRCNSQYAWQTLITYDACIRLCLQSWAKGCTE 323
           DP  ++R+   F + +  + P L  +  S  + Q  W     Y+AC+RL        C E
Sbjct: 4   DPKDLKRR-VQFEEGVFNKKPRLLTFRLSTLHDQ--WLAFQVYEACMRLGSAPEMSDCKE 60

Query: 324 APEFLKDECLALRAAFGLHEFLLQPRGVKPPEGISTRPSEQTIPLKMNKAVGKIRVEVXX 383
           A  F+K++   LR +FGL + LL+   V+    + T      +  K  K +  I+V+V  
Sbjct: 61  AKTFVKNDYYLLRDSFGLRQILLKSEKVQMQ--LETEIQSGGVVPKPKKFIDTIKVQV-- 116

Query: 384 XXXXXXXXXXSANSQQGGSIYMQAGMDYVRQVSSIVKXXXXXXXXXXXXXXXEEPLYCLL 443
                              + ++ G+D     S +                 +E   C+L
Sbjct: 117 -------------------LEVKVGLDAPTGCSMLSMMTNIIKTKSLQSEVLQEKFSCVL 157

Query: 444 QLKSATEENESESCSAIFLRPGNRDYH 470
           +LK++ EE+      A+ L PG+RD H
Sbjct: 158 KLKNSPEED------AVKLHPGSRDAH 178