Miyakogusa Predicted Gene
- Lj4g3v1440950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1440950.1 tr|G7JGA9|G7JGA9_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_4g082260 PE=,55.56,4e-19,
,gene.g55140.t1.1
(79 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g082265.2 | anaphase promoting complex subunit 2 | HC | ch... 98 2e-21
Medtr4g082265.1 | anaphase promoting complex subunit 2 | HC | ch... 98 2e-21
Medtr4g082150.4 | anaphase promoting complex subunit 2 | HC | ch... 97 4e-21
Medtr4g082150.2 | anaphase promoting complex subunit 2 | HC | ch... 97 5e-21
Medtr4g082150.3 | anaphase promoting complex subunit 2 | HC | ch... 97 5e-21
Medtr4g082150.1 | anaphase promoting complex subunit 2 | HC | ch... 97 5e-21
Medtr7g021880.1 | anaphase promoting complex subunit 2 | HC | ch... 86 1e-17
>Medtr4g082265.2 | anaphase promoting complex subunit 2 | HC |
chr4:31965674-31958082 | 20130731
Length = 884
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG DEEEDRS SVENQ RKEM VYE
Sbjct: 776 MENMAETSRNGGGSGNAQELLGGDEEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMA 835
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGVYFLK 883
>Medtr4g082265.1 | anaphase promoting complex subunit 2 | HC |
chr4:31965674-31958082 | 20130731
Length = 884
Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG DEEEDRS SVENQ RKEM VYE
Sbjct: 776 MENMAETSRNGGGSGNAQELLGGDEEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMA 835
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGVYFLK 883
>Medtr4g082150.4 | anaphase promoting complex subunit 2 | HC |
chr4:31901860-31893593 | 20130731
Length = 708
Score = 96.7 bits (239), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG D+EEDRS SVENQ RKEM VYE
Sbjct: 600 MENMAETSRNGGGSGNAQELLGGDDEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMT 659
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 660 LDRIHNTLKMFCIADPPYDKSLHQLQSFLSGLVSEEKLELRDGVYFLK 707
>Medtr4g082150.2 | anaphase promoting complex subunit 2 | HC |
chr4:31901860-31893593 | 20130731
Length = 884
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG D+EEDRS SVENQ RKEM VYE
Sbjct: 776 MENMAETSRNGGGSGNAQELLGGDDEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMT 835
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLHQLQSFLSGLVSEEKLELRDGVYFLK 883
>Medtr4g082150.3 | anaphase promoting complex subunit 2 | HC |
chr4:31901860-31894946 | 20130731
Length = 884
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG D+EEDRS SVENQ RKEM VYE
Sbjct: 776 MENMAETSRNGGGSGNAQELLGGDDEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMT 835
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLHQLQSFLSGLVSEEKLELRDGVYFLK 883
>Medtr4g082150.1 | anaphase promoting complex subunit 2 | HC |
chr4:31901860-31893593 | 20130731
Length = 884
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+AET++NGG SGNAQ+LLG D+EEDRS SVENQ RKEM VYE
Sbjct: 776 MENMAETSRNGGGSGNAQELLGGDDEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMT 835
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
MFC A+ QLQ+FLSGL SEEKLELRD +Y LK
Sbjct: 836 LDRIHNTLKMFCIADPPYDKSLHQLQSFLSGLVSEEKLELRDGVYFLK 883
>Medtr7g021880.1 | anaphase promoting complex subunit 2 | HC |
chr7:6983764-6990007 | 20130731
Length = 911
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 63/108 (58%), Gaps = 30/108 (27%)
Query: 1 MENVAETNKNGG-SGNAQKLLGDDEEEDRSWDSVENQPRKEMAVYE-------------- 45
MEN+A+T+KNGG SG A +LL D+EEEDR SVENQ RKEMAVYE
Sbjct: 804 MENMAQTSKNGGGSGIAHELLADNEEEDRLGASVENQLRKEMAVYEKFILGMLTNLGSMT 863
Query: 46 ---------MFCNANKS------QLQTFLSGLASEEKLELRDEIYILK 78
M C A+ QLQ+FLSGL SEEKL+ RD YILK
Sbjct: 864 LDRIHNMLKMVCIADPPYDKSLQQLQSFLSGLVSEEKLKFRDGTYILK 911