Miyakogusa Predicted Gene

Lj4g3v1425340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1425340.1 Non Characterized Hit- tr|K3XM04|K3XM04_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002927,33.52,3e-17,Di19,Drought induced 19/ RING finger protein
114; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; s,CUFF.49226.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g104770.1 | drought-induced protein | HC | chr4:43413100-4...   257   5e-69
Medtr1g083780.1 | protein dehydration-induced-like protein | HC ...    82   5e-16
Medtr3g076880.1 | hypothetical protein | LC | chr3:34527979-3452...    81   7e-16
Medtr3g076670.1 | hypothetical protein | LC | chr3:34464385-3446...    66   2e-11
Medtr3g076720.1 | transmembrane protein, putative | LC | chr3:34...    56   2e-08
Medtr2g028420.1 | hypothetical protein | LC | chr2:10534983-1053...    54   1e-07
Medtr2g035070.1 | drought-induced protein | HC | chr2:13467798-1...    50   2e-06

>Medtr4g104770.1 | drought-induced protein | HC |
           chr4:43413100-43409752 | 20130731
          Length = 202

 Score =  257 bits (657), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 132/206 (64%), Positives = 150/206 (72%), Gaps = 8/206 (3%)

Query: 1   MDFDYRARIHSAKHLSAAQAARFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCS 60
           MD D  A IHS KH S  Q+A  HS+NYS I Y DVD+D +SDFRCPFCDFEI+VP LCS
Sbjct: 1   MDLDMMASIHSTKHFSTLQSAPLHSENYSVIRYTDVDDDYQSDFRCPFCDFEIQVP-LCS 59

Query: 61  NLEEEHCFALKNMVCPVCEENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRK 120
           + EEE+C + KN+VCPVCEENLG   NNA TQFTHSSSR+W WKTEKSS WSGNS M  K
Sbjct: 60  DFEEEYCSSPKNVVCPVCEENLG---NNAFTQFTHSSSRKWGWKTEKSSIWSGNSAMFGK 116

Query: 121 KLAARGNKQESMADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDIHNSKRSGTDAPDV 180
           KLAARGNKQES+ DPLLS                   S+  NKDI+IHN+KRSGTD    
Sbjct: 117 KLAARGNKQESIPDPLLSPFICNVPIPNYNNNHPDENSSLSNKDIEIHNAKRSGTD---- 172

Query: 181 GVEQDQQERKLRAAFAQQLVLSTIFE 206
           GVEQD+QE+ LRA F Q+L+LSTIFE
Sbjct: 173 GVEQDEQEQWLRATFVQKLMLSTIFE 198


>Medtr1g083780.1 | protein dehydration-induced-like protein | HC |
           chr1:37296369-37293770 | 20130731
          Length = 219

 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 17/200 (8%)

Query: 20  AARFHSDNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCE 79
           A +  SD + G    D D D R +F CPFC    ++  LC +++EEH    KN VCPVC 
Sbjct: 21  ALQSRSDMFMGFDENDADEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCA 80

Query: 80  ENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLAARGNKQE--------- 130
             +G D    IT   H    +   K+ K  ++S  S +LRK+L   GN Q          
Sbjct: 81  LRVGVDMVAHIT-LQHGKYMQRKRKSRKGGSYSTLS-LLRKEL-REGNLQSLFGGSPCIV 137

Query: 131 ----SMADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDIHNSKRSGTDAPDVGVEQDQ 186
               +  DPLLS                    T  +K +      +S  + P + V +D+
Sbjct: 138 SSSNAAPDPLLSSFISPLGNESASSQSHTHTETRSSKKLSDEVVSKSHVETPTMSV-KDK 196

Query: 187 QERKLRAAFAQQLVLSTIFE 206
           +E+  R  F Q L++STIF+
Sbjct: 197 EEKAKRCEFVQGLLMSTIFD 216


>Medtr3g076880.1 | hypothetical protein | LC |
           chr3:34527979-34525389 | 20130731
          Length = 259

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 95/213 (44%), Gaps = 18/213 (8%)

Query: 6   RARIHSAKHLSAAQAARFHS------DNYSGIHYIDVDNDGRSDFRCPFCDFEIEVPELC 59
           R RI S  ++        HS      ++ S  + +D D       +CP CDF IEV    
Sbjct: 50  RVRITSPPNICMTNEVDDHSISGDEKEDTSVSNQVDPDEVNLPIVKCPVCDFNIEV---- 105

Query: 60  SNLEEEHCFALKNMVCPVCEENLGKDANNAITQFTHSSSRRWAWKTEKSSNWSG-NSEML 118
            + +    +   NM CPVC+E+LG+DA   +   +   S++W WK  K +     + E+ 
Sbjct: 106 -STDRSVDYDAYNMNCPVCDESLGEDAIRMVQNTSFPISQKWIWKPRKKNGVQNVHWEVH 164

Query: 119 RKKLAARG-NKQESMADPLLSXXXXXXXXXXXXXXXXXXXSTPRNKDIDI-----HNSKR 172
            KK A+R  NK E M D +                      T  N   D+       +K 
Sbjct: 165 GKKDASREHNKHEQMPDSISPAFRENVYLQSLNYILSDEEDTISNASDDVVANDTSIAKS 224

Query: 173 SGTDAPDVGVEQDQQERKLRAAFAQQLVLSTIF 205
            GTDA D   E D QER+ RA F+Q+L++ST+F
Sbjct: 225 IGTDATDTRDELDVQERRKRATFSQELLMSTLF 257


>Medtr3g076670.1 | hypothetical protein | LC |
           chr3:34464385-34461861 | 20130731
          Length = 247

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 92/228 (40%), Gaps = 37/228 (16%)

Query: 1   MDFDYRARIHSAKHLSAAQAARFHSDNYSG------------------IHYIDVDNDGRS 42
           M+FD    I   K +   +      DN+ G                   + ID+D    S
Sbjct: 32  MEFDPSEIIERLKSIPMIRTRPGQEDNFIGNQVDDKSTSEEEKEGDTIFNPIDLDGYSPS 91

Query: 43  DFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGKDANNAITQFTHSSSRRWA 102
             +CP C+F+IEV  L  +  E+  +    M+CPVC ENLG++A   +   +  +  +  
Sbjct: 92  AKKCPKCNFDIEVSALL-DCSEDQTYVSYTMICPVCHENLGEEAIRNMQSSSFPAVPKGI 150

Query: 103 WKTEKSSN--WSGNSE---MLRKKLAARGNKQESMADPLLSXXXXXXXXXXXXXXXXXXX 157
           WK  ++SN  W  + +   +    + ++ N      D   S                   
Sbjct: 151 WKPWENSNVDWELHDKRDTITNADVPSQDNAYVPSFDDFFS----------DEDTISNAS 200

Query: 158 STPRNKDIDIHNSKRSGTDAPDVGVEQDQQERKLRAAFAQQLVLSTIF 205
             P  K   I N K    DAPD   E   QER  RAAFAQ+L++S +F
Sbjct: 201 DVPVEK--GISNGKSFEKDAPDTSDEH-VQERSDRAAFAQELLISALF 245


>Medtr3g076720.1 | transmembrane protein, putative | LC |
           chr3:34479302-34476397 | 20130731
          Length = 398

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)

Query: 34  IDVDNDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGKDANNAITQF 93
           ID+ +D     +CP C F+IEV  L  +  E+  + L  M+CP+C+E+LG+DA   +   
Sbjct: 77  IDLHSDSPCAIKCPACTFDIEVSAL-RHRSEDQTYDLYTMICPLCDESLGEDATRMVQNS 135

Query: 94  THSSSRRWAWKTEKSSN 110
              SS +  WK  ++SN
Sbjct: 136 RLPSSPKGIWKQRENSN 152


>Medtr2g028420.1 | hypothetical protein | LC |
           chr2:10534983-10530470 | 20130731
          Length = 320

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 23/174 (13%)

Query: 44  FRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGKDANNAI--------TQFTH 95
            +CP CDF+I+V  L   LE+   +    M+CPVC++NLG+D    +         +F H
Sbjct: 93  IKCPGCDFDIKVSSLRDYLEDP-TYNSDTMICPVCDKNLGEDVIRMVQSSRLPTSPKFQH 151

Query: 96  SSSRRWAWKTEKSSN-WSGNSEMLRKKLAARG-NKQESMADPLLSXXXXXXXXXXXXXXX 153
             +R   WK   S N W    E+  K  A+ G  K    +D   S               
Sbjct: 152 IRNR---WKDGVSINDW----ELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFF 204

Query: 154 XXXXSTPRNKDI----DIHNSKRS-GTDAPDVGVEQDQQERKLRAAFAQQLVLS 202
               +     DI    DI   K S G +  +   E+D QER  +AAFAQ+L +S
Sbjct: 205 SDEDTISDASDISDANDIPIGKSSGGAEVLNTRHEEDVQERSNKAAFAQELFMS 258


>Medtr2g035070.1 | drought-induced protein | HC |
           chr2:13467798-13470420 | 20130731
          Length = 227

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 38  NDGRSDFRCPFCDFEIEVPELCSNLEEEHCFALKNMVCPVCEENLGKDANNAIT------ 91
           +D R+++ CPFC  + +V  LC +++EEH       VCP C + +G D    IT      
Sbjct: 38  DDLRAEYLCPFCAEDYDVVSLCCHIDEEHPLQANTGVCPACGQKVGMDLVAHITTQHAKF 97

Query: 92  -QFTHSSSRRWAWKTEKSSNWSGNSEMLRKKLAARG 126
            + +      +  +  +      NS + RK+L   G
Sbjct: 98  FKISFFKVEVYVQRKRRVRKGVTNSTLFRKELREAG 133