Miyakogusa Predicted Gene
- Lj4g3v1415280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v1415280.1 tr|A9RCK4|A9RCK4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64129
,27.03,0.0000000000004,no description,NULL; seg,NULL,CUFF.49221.1
(619 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g104750.1 | hypothetical protein | HC | chr4:43395065-4340... 677 0.0
>Medtr4g104750.1 | hypothetical protein | HC |
chr4:43395065-43400061 | 20130731
Length = 605
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/615 (61%), Positives = 423/615 (68%), Gaps = 24/615 (3%)
Query: 19 VAETKRKEELPPPDLTDFMNDMFFGAADMERKTYDLTGSVRGMNXXXXXXXXXXX-STRS 77
+AET R+EE PPPDLTDFMNDMFFG D +KTYDLTG V GMN STRS
Sbjct: 1 MAETLRREE-PPPDLTDFMNDMFFGTVDTHQKTYDLTGGV-GMNMDDDEEDDGFDDSTRS 58
Query: 78 NSARLTQEWLQEARRVVASSPSRCESPGRLSGSPRFAAAQSAGSPLHSLDRRDEMSRTRS 137
NSARLTQEWLQEAR VVASSPSRCESPGRL GSPRFA+ + S DR D +SRTRS
Sbjct: 59 NSARLTQEWLQEARLVVASSPSRCESPGRLLGSPRFASPSKSSL--PSSDRTDALSRTRS 116
Query: 138 ARRYRAVEGVSDEILSKTTKHSRNKSETFAERSPEGDGSPATAVHKWFSNILKXXXXXXX 197
ARRYR EG+SDEILSKT KH+RNKS+TFA+ S +GDGSPATAVHKWFSNILK
Sbjct: 117 ARRYRTAEGISDEILSKTAKHTRNKSDTFAQPSSDGDGSPATAVHKWFSNILKPNNNNNN 176
Query: 198 XXXXXXXXXXXXXXXXXXXXRQPFSRKSRFQSEPPAAASPHKLGIPAPVSRRTFKSSVPL 257
RQP RKSRFQS P A P + P SRRTFK S
Sbjct: 177 NNNNSPSNTPPPSPDSLPP-RQPHPRKSRFQSSPSPAPQPQGIQAPNYNSRRTFKPSALS 235
Query: 258 SPTAENANR-----PGSLPLSPPRNLVESAHRRTLSSSTCSREKIAPTRH-VGKGEEVTR 311
P EN +R SLPLSPPRNLVESAHRRT+SSSTCS EKIAP ++ V + EE T
Sbjct: 236 EPLPENTSRRTPHSEDSLPLSPPRNLVESAHRRTISSSTCSWEKIAPVKNFVKEEEETTE 295
Query: 312 EQSLNGFLKEQRSLLQKISNRELRAHA--KIVLSGTSNSTASMVAAICHAWLLAYRQREN 369
E SLNGFLKEQR+L Q+ S EL + KIVLSG NSTASMVAAICHAWLL YRQ+EN
Sbjct: 296 EYSLNGFLKEQRNLFQRFSKGELHTNVEIKIVLSGHLNSTASMVAAICHAWLLGYRQKEN 355
Query: 370 DXXXXXXXXXXXXXXXXXXXSMLKLRQAAWLFHHAGVDATALLFSDEVDMESLLVTGQLS 429
D M KL+QAAWLFHHAG+DAT+LLF+DEVDMESLLVTG+LS
Sbjct: 356 DGGGKERTVVVPVMNVKRS-DMCKLKQAAWLFHHAGLDATSLLFTDEVDMESLLVTGKLS 414
Query: 430 VLVVGQDVLSTTSEVGSQCTILTDNYCEDAYXXXXXXXXXXXXXXXXXXDTQNLRASATI 489
VL+VGQDVLS T+EVGSQCT+LTDNYCEDAY DTQNL+ASA +
Sbjct: 415 VLMVGQDVLSATNEVGSQCTVLTDNYCEDAYDLLQNSVLKKLLLAGILLDTQNLKASAAV 474
Query: 490 SMTRDAEAVQLLLVGSPPNYRYALYDQLMQDQKGTSFVEALNHNYGRPHEESDQNSEG-- 547
SMTRDAEAVQLLLVG PNYRYAL+DQLMQDQ+ +SFVEALNHNY + +ESDQNSEG
Sbjct: 475 SMTRDAEAVQLLLVGLAPNYRYALFDQLMQDQQSSSFVEALNHNYWKIPDESDQNSEGNM 534
Query: 548 QHK---RRSSSTSERDIIMSSSKTSSIDTKVKLITXXXXXXXXXXXXXXXXXXERENSRG 604
+HK R+SSSTS+R+ +SSKT+S D KVKL T E+E SRG
Sbjct: 535 EHKVRDRKSSSTSDRETTNASSKTNSTDAKVKLAT----PILQSPSPGVSSNAEKEASRG 590
Query: 605 KNTFFLARWFGFGSK 619
KN FFLARWFGFGSK
Sbjct: 591 KNKFFLARWFGFGSK 605