Miyakogusa Predicted Gene

Lj4g3v1415270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1415270.1 Non Characterized Hit- tr|H9MCZ3|H9MCZ3_PINRA
Uncharacterized protein (Fragment) OS=Pinus radiata GN,64.18,6e-19,
,CUFF.49233.1
         (202 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g104730.1 | component of high affinity nitrate transporter...   325   1e-89
Medtr4g104700.1 | component of high affinity nitrate transporter...   312   2e-85

>Medtr4g104730.1 | component of high affinity nitrate transporter |
           HC | chr4:43385189-43383529 | 20130731
          Length = 206

 Score =  325 bits (834), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 151/200 (75%), Positives = 177/200 (88%)

Query: 1   MAAHRVIIIASLLFCLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALNK 60
           MAAH++++ + LL CLA  CYGK LFSSLK+T+DVTASPK GQV+ +G+D I+ TWALNK
Sbjct: 1   MAAHKLVVASLLLCCLAEICYGKDLFSSLKRTIDVTASPKQGQVLLSGVDKISGTWALNK 60

Query: 61  TLPAGTDSSYKTIKVKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVHT 120
           T PAGTDSSYKTIK+KLCYAPISQ+DRAWRKTEDELSRDKTCQHK++A PY+ASNKTV T
Sbjct: 61  TFPAGTDSSYKTIKLKLCYAPISQKDRAWRKTEDELSRDKTCQHKMLAMPYNASNKTVQT 120

Query: 121 FEWLIERDVPEATYFVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICSA 180
           FEWLI+RDVP+ATYFVRAYA DSND +V YGQT++A K++NLF+I AI+GRH +LDICS 
Sbjct: 121 FEWLIQRDVPQATYFVRAYAFDSNDKEVAYGQTTNAGKSTNLFEINAISGRHATLDICSV 180

Query: 181 CFSAFSVVSLIFFFYIEKRK 200
            FSAFSVVSL  FFYIEKRK
Sbjct: 181 VFSAFSVVSLGVFFYIEKRK 200


>Medtr4g104700.1 | component of high affinity nitrate transporter |
           HC | chr4:43379731-43378451 | 20130731
          Length = 206

 Score =  312 bits (799), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 151/200 (75%), Positives = 177/200 (88%)

Query: 1   MAAHRVIIIASLLFCLAGTCYGKVLFSSLKKTLDVTASPKHGQVVEAGLDTITVTWALNK 60
           MAAH++++ + LL CL+  CYGK LFSSLK+TLDVTASPKHGQV+ +G+D I+ TWALNK
Sbjct: 1   MAAHKLVVASLLLCCLSELCYGKDLFSSLKRTLDVTASPKHGQVLLSGVDKISGTWALNK 60

Query: 61  TLPAGTDSSYKTIKVKLCYAPISQQDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVHT 120
           T PAGTDSSYKTIK+KLCYA ISQ+DRAWRKTEDELSRDKTCQHK++A PY+ASNKTV T
Sbjct: 61  TFPAGTDSSYKTIKLKLCYAAISQKDRAWRKTEDELSRDKTCQHKMLAMPYNASNKTVQT 120

Query: 121 FEWLIERDVPEATYFVRAYALDSNDVQVGYGQTSDAKKTSNLFKIQAITGRHLSLDICSA 180
           FEWLI+RDVP+ATYFVRAYA DSND +V YGQT++A K++NLF+I AI+GRH +LDICS 
Sbjct: 121 FEWLIQRDVPQATYFVRAYAFDSNDKEVAYGQTTNAGKSTNLFEINAISGRHATLDICSV 180

Query: 181 CFSAFSVVSLIFFFYIEKRK 200
            FSAFSVVSL  FFYIEKRK
Sbjct: 181 VFSAFSVVSLGVFFYIEKRK 200