Miyakogusa Predicted Gene

Lj4g3v1389200.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1389200.2 Non Characterized Hit- tr|D6WKZ3|D6WKZ3_TRICA
Putative uncharacterized protein OS=Tribolium
castaneu,39.45,2e-16,seg,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; SUBFAMILY NOT ,CUFF.49158.2
         (306 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g104230.1 | zinc finger protein | HC | chr4:43076627-43071...   399   e-111
Medtr4g104230.2 | zinc finger protein | HC | chr4:43076627-43071...   395   e-110
Medtr3g052770.1 | zinc finger protein | HC | chr3:20884055-20879...   290   9e-79

>Medtr4g104230.1 | zinc finger protein | HC | chr4:43076627-43071285
           | 20130731
          Length = 276

 Score =  399 bits (1026), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/307 (70%), Positives = 223/307 (72%), Gaps = 32/307 (10%)

Query: 1   MKKLTAIVSTFSILILCFQMLLHVHSIPLLLGNQVDEESSGRRNLKQEPEHTREVHCSRE 60
           MKK+T IVS     IL FQ    V S PLL GNQV EESSG RNL QE EH  EVHCSRE
Sbjct: 1   MKKVTVIVSILLFSILRFQPF--VSSSPLLYGNQVYEESSGERNLNQEHEHAPEVHCSRE 58

Query: 61  RSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEENKIYIDYHEWRCGYCKKS 120
           RSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEE++IY+D +EWRCGYCKKS
Sbjct: 59  RSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEEHRIYLDRNEWRCGYCKKS 118

Query: 121 FREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVMNSKSSRCKCNPAAAARNLHL 180
           FREEKFLDQH DNRH NLLN S GKCLA LCGALHCDAV NSKSSR KCNPAAAARN HL
Sbjct: 119 FREEKFLDQHLDNRHCNLLNLSHGKCLADLCGALHCDAVTNSKSSRSKCNPAAAARNRHL 178

Query: 181 CEVALTIFFSICFYFQCNPIVLPNLYALIFQSLADSCFPISEGPSASRLHELFLHQFCDA 240
           CE                             SLADSCFPIS G SASRLHELFLHQFCDA
Sbjct: 179 CE-----------------------------SLADSCFPISGGLSASRLHELFLHQFCDA 209

Query: 241 HTCSGKHKPFSRGGKVQVSFFRLAAGAXXXXXXXXXXXXXXXXQSDMKSRTQELRRIPKR 300
           H+CSGKHKPFSRGGK Q SFFRLAAGA                Q DM  RTQ+LRRI K 
Sbjct: 210 HSCSGKHKPFSRGGKGQGSFFRLAAGALILVLLPVFYLFIYLIQCDMNGRTQDLRRISKS 269

Query: 301 G-KAKPS 306
           G KAKPS
Sbjct: 270 GWKAKPS 276


>Medtr4g104230.2 | zinc finger protein | HC | chr4:43076627-43071285
           | 20130731
          Length = 277

 Score =  395 bits (1015), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/308 (70%), Positives = 223/308 (72%), Gaps = 33/308 (10%)

Query: 1   MKKLTAIVSTFSILILCFQMLLHVHSIPLLLGNQVDEESSGR-RNLKQEPEHTREVHCSR 59
           MKK+T IVS     IL FQ    V S PLL GNQV EESSG  RNL QE EH  EVHCSR
Sbjct: 1   MKKVTVIVSILLFSILRFQPF--VSSSPLLYGNQVYEESSGESRNLNQEHEHAPEVHCSR 58

Query: 60  ERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEENKIYIDYHEWRCGYCKK 119
           ERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEE++IY+D +EWRCGYCKK
Sbjct: 59  ERSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEEHRIYLDRNEWRCGYCKK 118

Query: 120 SFREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVMNSKSSRCKCNPAAAARNLH 179
           SFREEKFLDQH DNRH NLLN S GKCLA LCGALHCDAV NSKSSR KCNPAAAARN H
Sbjct: 119 SFREEKFLDQHLDNRHCNLLNLSHGKCLADLCGALHCDAVTNSKSSRSKCNPAAAARNRH 178

Query: 180 LCEVALTIFFSICFYFQCNPIVLPNLYALIFQSLADSCFPISEGPSASRLHELFLHQFCD 239
           LCE                             SLADSCFPIS G SASRLHELFLHQFCD
Sbjct: 179 LCE-----------------------------SLADSCFPISGGLSASRLHELFLHQFCD 209

Query: 240 AHTCSGKHKPFSRGGKVQVSFFRLAAGAXXXXXXXXXXXXXXXXQSDMKSRTQELRRIPK 299
           AH+CSGKHKPFSRGGK Q SFFRLAAGA                Q DM  RTQ+LRRI K
Sbjct: 210 AHSCSGKHKPFSRGGKGQGSFFRLAAGALILVLLPVFYLFIYLIQCDMNGRTQDLRRISK 269

Query: 300 RG-KAKPS 306
            G KAKPS
Sbjct: 270 SGWKAKPS 277


>Medtr3g052770.1 | zinc finger protein | HC | chr3:20884055-20879420
           | 20130731
          Length = 272

 Score =  290 bits (743), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 147/307 (47%), Positives = 194/307 (63%), Gaps = 36/307 (11%)

Query: 1   MKKLTAIVSTFSILILCFQMLLHVHSIPLLLGNQVDEESSGRRNLKQEPEHTREVHCSRE 60
           M K+      F + +L    L  V S+P +    VD +++  R L QE     ++HCSRE
Sbjct: 1   MNKILVWFHRFVVFLL----LTRVSSLPHIDDGHVDSDAA--RILDQEQSGDHQIHCSRE 54

Query: 61  RSRVASKVIEEYLTPFVEKENYQLSRKCRLHPENDMFRDQEENKIYIDYHEWRCGYCKKS 120
           RSR+A K+++EYLTPFVEKE Y +SR+CRLHP+ND++RDQE++K +ID +EW+CGYCKK+
Sbjct: 55  RSRIAWKIVQEYLTPFVEKEKYNISRRCRLHPDNDIYRDQEQHKSHIDINEWQCGYCKKT 114

Query: 121 FREEKFLDQHFDNRHYNLLNASDGKCLAGLCGALHCDAVMNSKSSRCKCNPAAAARNLHL 180
           F EEK LDQHFDNRH NLLN  + +CLA +CGALHCD  +NS S + KCNPAAAARN H+
Sbjct: 115 FYEEKHLDQHFDNRHSNLLNLKESRCLADVCGALHCDHEINSGSKKSKCNPAAAARNKHI 174

Query: 181 CEVALTIFFSICFYFQCNPIVLPNLYALIFQSLADSCFPISEGPSASRLHELFLHQFCDA 240
           CE                             ++ADSCFP++EGP+ASRLHE FLHQFCDA
Sbjct: 175 CE-----------------------------TIADSCFPVNEGPAASRLHEFFLHQFCDA 205

Query: 241 HTCSGKHKPFSRGGKVQVSFFRLAAGAXXXXXXXXXXXXXXXXQSDMKSRTQELRRIPKR 300
           H+C+G+ KPFSRG + + + F + A                  Q  +K  +Q LRR+ + 
Sbjct: 206 HSCTGRGKPFSRGRRKKTNVFYIVASIFLVMLLVLFYLYMYLYQRGLKKESQMLRRVSQA 265

Query: 301 G-KAKPS 306
           G K KPS
Sbjct: 266 GRKKKPS 272