Miyakogusa Predicted Gene

Lj4g3v1389120.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1389120.1 tr|I3SNP5|I3SNP5_LOTJA Nucleoside diphosphate
kinase OS=Lotus japonicus PE=2 SV=1,99.57,0,no description,Nucleoside
diphosphate kinase; Nucleoside diphosphate kinase, NDK,Nucleoside
diphosph,CUFF.49146.1
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | H...   340   7e-94
Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | H...   194   5e-50
Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | H...   190   8e-49
Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | H...    60   2e-09

>Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | HC |
           chr4:43032291-43037070 | 20130731
          Length = 230

 Score =  340 bits (872), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 171/242 (70%), Positives = 190/242 (78%), Gaps = 25/242 (10%)

Query: 1   MGVFAGTTAAACVTSSLALTPTTPFSSNKRTTITTSSSKCRIRATHHQNLTAFPSTSHLF 60
           MGVF GT +    +S L  + T   SS  RTT               Q+L+AFPS SHLF
Sbjct: 4   MGVFCGTNSIYVTSSQLRTSNTNTRSSQLRTT---------------QHLSAFPSKSHLF 48

Query: 61  -------YAKSLRT---TKPRIFLPHLIASLEQVDQTYIMVKPDGVQRGVVGDIISRFEK 110
                  YAK++RT   T   IFLPHLIASLEQVD+TYIMVKPDGVQRG+VG+IISRFEK
Sbjct: 49  SSSTSSSYAKTIRTKSSTNTGIFLPHLIASLEQVDRTYIMVKPDGVQRGLVGEIISRFEK 108

Query: 111 KGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKLIDYITSGPVVCMAWEGVGVVASARKL 170
           KGFKL GLKL+QCSK+LAEEHYKDL  +SFFPKL +YITSGPVV MAWEGVGVV SARKL
Sbjct: 109 KGFKLIGLKLFQCSKELAEEHYKDLNQRSFFPKLSEYITSGPVVSMAWEGVGVVPSARKL 168

Query: 171 IGATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIALWFKEGELCEWTPVLTPWL 230
           IGAT+PLQAEPGTIRGD AV+TGRN++HGSDSPENG+REIALWFKEGELCEWTPVL PWL
Sbjct: 169 IGATNPLQAEPGTIRGDFAVETGRNVIHGSDSPENGEREIALWFKEGELCEWTPVLHPWL 228

Query: 231 RE 232
           RE
Sbjct: 229 RE 230


>Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:1369594-1366875 | 20130731
          Length = 149

 Score =  194 bits (494), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/148 (60%), Positives = 108/148 (72%), Gaps = 1/148 (0%)

Query: 85  DQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFPKL 144
           +QT+IM+KPDGVQRG+VG+IISRFEKKGF L GLK     +  AE+HY DL  K FF  L
Sbjct: 3   EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFLNVERAFAEKHYADLSAKPFFSGL 62

Query: 145 IDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDSPE 204
           ++YI SGPVV M WEG  VV + RK+IGAT+P Q+EPGTIRGD AV+ GRN++HGSDS E
Sbjct: 63  VEYIVSGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAVEIGRNVIHGSDSVE 122

Query: 205 NGKREIALWFKEGELCEWTPVLTPWLRE 232
           +  +EI LWF EG    W   L  W+ E
Sbjct: 123 SANKEIGLWFPEGPAA-WQSSLHSWIYE 149


>Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:41955037-41951647 | 20130731
          Length = 234

 Score =  190 bits (483), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 112/148 (75%)

Query: 83  QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
           ++++T+I +KPDGVQRG++ +IISRFE+KG+KL G+K+   +K+ A++HY DLK + FF 
Sbjct: 83  ELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVLHPTKEFAKQHYHDLKERPFFD 142

Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAEPGTIRGDLAVQTGRNIVHGSDS 202
            L D+++SGPV+ M WEG GV+   RKLIGATDP ++EPGTIRGDLAV  GRNI+HGSD 
Sbjct: 143 GLCDFLSSGPVIAMVWEGQGVIVYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 202

Query: 203 PENGKREIALWFKEGELCEWTPVLTPWL 230
           PE  K EI LWFK  EL  +T     W+
Sbjct: 203 PETAKDEINLWFKPEELVSFTSNSEKWV 230


>Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:7615826-7619170 | 20130731
          Length = 215

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%)

Query: 83  QVDQTYIMVKPDGVQRGVVGDIISRFEKKGFKLTGLKLYQCSKDLAEEHYKDLKLKSFFP 142
            +++T  ++KPDG+      DI     + GF +   K+ Q  +   +  Y +   K+FF 
Sbjct: 70  NIEKTLAIIKPDGLLGNYTDDIKRTILEYGFSIVKEKIVQLDETTVKRFYAEHSSKNFFS 129

Query: 143 KLIDYITSGPVVCMAWEGVGVVASARKLIGATDPLQAE 180
            L+ Y+TSGPV+ M  E    +A  R L+G TD  +A+
Sbjct: 130 SLVKYMTSGPVLTMVLEKDNAIADWRALMGPTDASKAK 167