Miyakogusa Predicted Gene

Lj4g3v1388620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388620.1 Non Characterized Hit- tr|I1MUN6|I1MUN6_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,67.92,0.0000000000004,
,NODE_63295_length_113_cov_183.761063.path2.1
         (53 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g103680.1 | argininosuccinate synthase | HC | chr4:4286963...    69   1e-12
Medtr3g088970.1 | argininosuccinate synthase | HC | chr3:3399005...    61   3e-10
Medtr5g042880.1 | argininosuccinate synthase | HC | chr5:1885787...    60   4e-10

>Medtr4g103680.1 | argininosuccinate synthase | HC |
          chr4:42869630-42865333 | 20130731
          Length = 478

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 40/53 (75%)

Query: 1  MAQLKALPAYPSSATPPSLHATDHLLHHQFWKAKPSSFKQLGPRACVGAGKLQ 53
          MAQLKA P++P +   PSLHAT+++L ++ W A P SFK+L PRA V AG+LQ
Sbjct: 1  MAQLKAFPSHPCATPTPSLHATENILFNRVWMANPCSFKKLKPRAGVAAGRLQ 53


>Medtr3g088970.1 | argininosuccinate synthase | HC |
          chr3:33990059-33993943 | 20130731
          Length = 477

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 1  MAQLKALPAYPSSATPPSLHATDHLLHHQFWKAKPSSFKQLGPRACVGAG 50
          MAQL A+  Y S A  P+ HA +HLLHH+F +AKPSS ++L PR   GA 
Sbjct: 1  MAQLNAILTYSSPAIAPTKHAKEHLLHHRFCQAKPSSLRELSPRRSFGAA 50


>Medtr5g042880.1 | argininosuccinate synthase | HC |
          chr5:18857878-18852018 | 20130731
          Length = 480

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 2/55 (3%)

Query: 1  MAQLKALPAYPSSATP-PSLHATDH-LLHHQFWKAKPSSFKQLGPRACVGAGKLQ 53
          MAQLK+ P++P + T  PSL +T+H LL ++FWKA P S+K+L PR  V A +LQ
Sbjct: 1  MAQLKSFPSHPCTTTSAPSLRSTEHILLFNRFWKANPCSYKELRPRTSVDATRLQ 55