Miyakogusa Predicted Gene

Lj4g3v1388530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388530.1 Non Characterized Hit- tr|Q2QVC1|Q2QVC1_ORYSJ
Argininosuccinate synthase, chloroplast, putative, exp,80.7,3e-19,no
description,Argininosuccinate synthetase, catalytic/multimerisation
domain body;
Argininosuccinat,NODE_58279_length_206_cov_131.689316.path2.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g042880.1 | argininosuccinate synthase | HC | chr5:1885787...   108   1e-24
Medtr4g103680.1 | argininosuccinate synthase | HC | chr4:4286963...   105   7e-24
Medtr3g088970.1 | argininosuccinate synthase | HC | chr3:3399005...   102   6e-23
Medtr3g088940.1 | argininosuccinate synthase | HC | chr3:3399995...    72   1e-13

>Medtr5g042880.1 | argininosuccinate synthase | HC |
           chr5:18857878-18852018 | 20130731
          Length = 480

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/57 (87%), Positives = 55/57 (96%)

Query: 1   MYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
           MYMMSVDPEDAPD+ EY+EIGIE+GLPVS+NGK LSPASLLAELNEIGGRHGIGR+D
Sbjct: 282 MYMMSVDPEDAPDQAEYLEIGIESGLPVSLNGKTLSPASLLAELNEIGGRHGIGRID 338


>Medtr4g103680.1 | argininosuccinate synthase | HC |
           chr4:42869630-42865333 | 20130731
          Length = 478

 Score =  105 bits (263), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 55/57 (96%)

Query: 1   MYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
           MYMMSVDPEDAPD+ EY+EIGIE+GLPVS+NGK LSPA+LLAELNEIGG+HGIGR+D
Sbjct: 280 MYMMSVDPEDAPDQAEYLEIGIESGLPVSLNGKTLSPATLLAELNEIGGKHGIGRID 336


>Medtr3g088970.1 | argininosuccinate synthase | HC |
           chr3:33990059-33993943 | 20130731
          Length = 477

 Score =  102 bits (255), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 46/57 (80%), Positives = 54/57 (94%)

Query: 1   MYMMSVDPEDAPDKPEYVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
           MYM++VDPEDAP++PEYVEIG E G+PVS+NGKRLSP +L+AELNEIGGRHGIGRVD
Sbjct: 279 MYMLTVDPEDAPNEPEYVEIGFELGIPVSLNGKRLSPGNLVAELNEIGGRHGIGRVD 335


>Medtr3g088940.1 | argininosuccinate synthase | HC |
          chr3:33999955-34000628 | 20130731
          Length = 152

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 38/41 (92%)

Query: 17 YVEIGIEAGLPVSVNGKRLSPASLLAELNEIGGRHGIGRVD 57
          YVEIG E+G+PV+VNGKRLSP +L+AELNEIGGRHGIG VD
Sbjct: 10 YVEIGFESGIPVTVNGKRLSPGNLVAELNEIGGRHGIGCVD 50