Miyakogusa Predicted Gene

Lj4g3v1388280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388280.1 Non Characterized Hit- tr|I1J5L8|I1J5L8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35887
PE,44.58,0.000000000001,CBS,Cystathionine beta-synthase, core; Domain
in cystathionine beta-synthase and ot,Cystathionine be,CUFF.49228.1
         (419 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g103550.1 | SNF1-related kinase regulatory subunit gamma 1...   654   0.0  
Medtr4g103550.2 | SNF1-related kinase regulatory subunit gamma 1...   473   e-133
Medtr5g038570.1 | SNF1-related kinase regulatory subunit gamma 1...   182   7e-46
Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1...    94   3e-19

>Medtr4g103550.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr4:42801133-42797980 | 20130731
          Length = 432

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/419 (77%), Positives = 342/419 (81%), Gaps = 1/419 (0%)

Query: 1   MATMMQECPRSPEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEI 60
           MATM +E PRSPEAKLGMRVEDLWDV E QLSPN+KLNACFESIPVSAFPLP  NQEIEI
Sbjct: 15  MATM-REMPRSPEAKLGMRVEDLWDVQEAQLSPNDKLNACFESIPVSAFPLPAKNQEIEI 73

Query: 61  KSDATLAEAVKILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQXXXXXX 120
           KSDATLAEAVKILARHN+ SAPVVDVDAPEDA+WIDRYIGIVEFAGIVVWILHQ      
Sbjct: 74  KSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEFAGIVVWILHQSEPPSP 133

Query: 121 XXXXXXXXXXXXXXKANGITFXXXXXXXXXXXXXXXXXNFFEDLTSSELYKNTKVRDISG 180
                          ANG TF                 NFFEDLTSSELYKNTKV+DISG
Sbjct: 134 RSPSTPTSASAIAAAANGNTFARELEALGLGSAATTSGNFFEDLTSSELYKNTKVQDISG 193

Query: 181 TFRWAPFLALERSNSFXXXXXXXSKYKMKSVPVVDLGAGRIGNIITQSAVIHMLAECVGL 240
           TFRWAPFLALERSNSF       SKYKMKSVPVVDLG+G I NIITQ AVIHMLAEC GL
Sbjct: 194 TFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGSGTIDNIITQPAVIHMLAECAGL 253

Query: 241 QWFESWGAKEISEVGLPLVTPDQIIKVYEDEPVLQAFKLMRKKXXXXXXXXXXXXATAVG 300
           QWFESWG KE+S+VGLPLVTP QIIKVYEDEPVLQAFK MRKK             TAVG
Sbjct: 254 QWFESWGTKELSDVGLPLVTPKQIIKVYEDEPVLQAFKEMRKKRVGGVPVIKRGGTTAVG 313

Query: 301 NISLRDVQFLLTAPEIYHDYRTVAVKDFLTAVRTYLDKNKNASSMSSEFITCKKYCTIKE 360
           NISLRDVQFLLTAPEIYHDYRT+ VKDFLT+VR+YL+KNKNA  MSSEFITCK+ CT+KE
Sbjct: 314 NISLRDVQFLLTAPEIYHDYRTITVKDFLTSVRSYLEKNKNAFPMSSEFITCKRDCTVKE 373

Query: 361 LIQLLDREKIHRVYVVDDDGNLQGLITLRDIISRLVHEPHGYFGDFFDGVLPLPANSRV 419
           LIQLLD+E+IHRVYVVDDDGNL+GLITLRDIISRLVHEPHGYFGDFFDGVLPLPANSRV
Sbjct: 374 LIQLLDKEQIHRVYVVDDDGNLEGLITLRDIISRLVHEPHGYFGDFFDGVLPLPANSRV 432


>Medtr4g103550.2 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr4:42801133-42797980 | 20130731
          Length = 341

 Score =  473 bits (1216), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/323 (74%), Positives = 249/323 (77%), Gaps = 1/323 (0%)

Query: 1   MATMMQECPRSPEAKLGMRVEDLWDVMEPQLSPNEKLNACFESIPVSAFPLPPLNQEIEI 60
           MATM +E PRSPEAKLGMRVEDLWDV E QLSPN+KLNACFESIPVSAFPLP  NQEIEI
Sbjct: 15  MATM-REMPRSPEAKLGMRVEDLWDVQEAQLSPNDKLNACFESIPVSAFPLPAKNQEIEI 73

Query: 61  KSDATLAEAVKILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQXXXXXX 120
           KSDATLAEAVKILARHN+ SAPVVDVDAPEDA+WIDRYIGIVEFAGIVVWILHQ      
Sbjct: 74  KSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEFAGIVVWILHQSEPPSP 133

Query: 121 XXXXXXXXXXXXXXKANGITFXXXXXXXXXXXXXXXXXNFFEDLTSSELYKNTKVRDISG 180
                          ANG TF                 NFFEDLTSSELYKNTKV+DISG
Sbjct: 134 RSPSTPTSASAIAAAANGNTFARELEALGLGSAATTSGNFFEDLTSSELYKNTKVQDISG 193

Query: 181 TFRWAPFLALERSNSFXXXXXXXSKYKMKSVPVVDLGAGRIGNIITQSAVIHMLAECVGL 240
           TFRWAPFLALERSNSF       SKYKMKSVPVVDLG+G I NIITQ AVIHMLAEC GL
Sbjct: 194 TFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGSGTIDNIITQPAVIHMLAECAGL 253

Query: 241 QWFESWGAKEISEVGLPLVTPDQIIKVYEDEPVLQAFKLMRKKXXXXXXXXXXXXATAVG 300
           QWFESWG KE+S+VGLPLVTP QIIKVYEDEPVLQAFK MRKK             TAVG
Sbjct: 254 QWFESWGTKELSDVGLPLVTPKQIIKVYEDEPVLQAFKEMRKKRVGGVPVIKRGGTTAVG 313

Query: 301 NISLRDVQFLLTAPEIYHDYRTV 323
           NISLRDVQFLLTAPEIYHDYR V
Sbjct: 314 NISLRDVQFLLTAPEIYHDYRYV 336


>Medtr5g038570.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr5:16949833-16952411 | 20130731
          Length = 449

 Score =  182 bits (461), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 148/249 (59%), Gaps = 4/249 (1%)

Query: 159 NFFEDLTSSELYKNTKVRDISGTFRWAPFLALERSNSFXXXXXXXSKYKMKSVPVVDLGA 218
           +F++ +   E +K+T VR I  ++RWAPF+ + ++++        SKY++++VPV++ G 
Sbjct: 195 DFYKVILQEEPFKSTTVRSILKSYRWAPFVPVAKNSAMLTVLLLLSKYRLRNVPVIEPGK 254

Query: 219 GRIGNIITQSAVIHMLAECVGLQWFESWGAKEISEVGLPLVTPDQIIKVYEDEPVLQAFK 278
             I N ITQSAVI  L  C G  WF+   A+ ++++GLP ++ D++I +  +E +L+AFK
Sbjct: 255 ADIVNFITQSAVIQGLEGCRGRDWFDCIAARPMADLGLPFMSADKVISIQSNELILEAFK 314

Query: 279 LMRKKXXXXXXXXXXXXATAVGNISLRDVQFLLTAPEIYHDYRTVAVKDFLTAVRTYLDK 338
           +MR               T VGN+S+RD+++LL  PEI+ ++R + V DF+  + +    
Sbjct: 315 IMRDNQIGGLPVVEGPAKTIVGNLSIRDIRYLLLKPEIFSNFRNLTVMDFMKKIVS---- 370

Query: 339 NKNASSMSSEFITCKKYCTIKELIQLLDREKIHRVYVVDDDGNLQGLITLRDIISRLVHE 398
               S   +  ITCK   T++ +I  L  + IHR+Y V+    + G+ITLRD+IS  + E
Sbjct: 371 ASYESGKVTRPITCKPDATLQSVIHTLASQSIHRIYTVNGQDQVVGVITLRDVISCFITE 430

Query: 399 PHGYFGDFF 407
           P  +F D++
Sbjct: 431 PDYHFDDYY 439



 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 52/80 (65%)

Query: 34  NEKLNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPEDAS 93
            E L   F  IPVS+FP  P  + +EI +D  + EAVKIL+  N+ +APV D DA   + 
Sbjct: 40  QETLTDSFAKIPVSSFPGVPGGKVVEILADTPVGEAVKILSESNILAAPVKDPDAGIGSD 99

Query: 94  WIDRYIGIVEFAGIVVWILH 113
           W DRY+GI++++ I++W++ 
Sbjct: 100 WRDRYLGIIDYSAIILWVME 119


>Medtr3g116850.1 | SNF1-related kinase regulatory subunit gamma 1 |
           HC | chr3:54642388-54640074 | 20130731
          Length = 419

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 166/389 (42%), Gaps = 72/389 (18%)

Query: 37  LNACFESIPVSAFPLPPLNQEIEIKSDATLAEAVKILARHNVFSAPVVDVDAPEDAS--W 94
           L    + IP+S+      +  +EIKS  T+ +A+ +L   + F A +VDV   E +S  +
Sbjct: 32  LQQFLDHIPISSISGINNSHVLEIKSGGTIRDAIHMLYEKDTFGAVIVDVLNTETSSIRF 91

Query: 95  IDRYIGIVEFAGIVVWILHQXXXXXXXXXXXXXXXXXXXXKANGITFXXXXXXXXXXXXX 154
            DRYIG + F  +V+W L +                                        
Sbjct: 92  SDRYIGFISFPNMVLWSLEECEKIREDAAD------------------------------ 121

Query: 155 XXXXNFFEDLTSSELYK---------NTKVRDISGTFRWAPFLALERSNSFXXXXXXXSK 205
               N  +D+ +  L+           TKV +++ +F W PF  +  +++        SK
Sbjct: 122 ----NHIKDIENQGLFSILDRIPQIGQTKVGELAKSFLWEPFFPVRLNDTILHALLLLSK 177

Query: 206 YKMKSVPVV-DLGAGRIGNIITQSAVIHMLAECVGLQWFESWGAKEISEVGLPLVTPDQI 264
           ++++ +PV+  L A  IG  +TQ+A++ +L +   L+WF +   K +S+        + +
Sbjct: 178 HRLQVLPVMQQLDAALIG-FVTQNALVQLLLQSSELEWFNNVADKNLSDFRFE--GQEHL 234

Query: 265 IKVYEDEPVLQAFKLMRKKXXXXXXXXXXXXATAVGNISLRDVQFLLTAPEIYHDYRTVA 324
             V+ D+ V  A KL+ +                +GN+   D+  L+   ++  + + + 
Sbjct: 235 SCVFGDQTVADALKLLWQNQTCAVAVVDRQTKKLIGNVRNSDIYNLVKNDDLLRNRKILT 294

Query: 325 VKDFL---------------------TAVRTYLDKNKNASSMSSEFITCKKYCTIKELIQ 363
           V++F+                     TA   +L KN   S M S  +T +   T+K++++
Sbjct: 295 VEEFVHTKTDKTDAEPTIKHDHGTNHTAGSLHL-KNSFTSRMDSP-VTNRANQTLKQVME 352

Query: 364 LLDREKIHRVYVVDDDGNLQGLITLRDII 392
            + +      ++++D+  + G+IT+RD+I
Sbjct: 353 HMTQTNSSFSFLINDNEQVTGVITVRDVI 381