Miyakogusa Predicted Gene

Lj4g3v1388240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1388240.1 tr|A4PIZ1|A4PIZ1_LOTJA Cysteine proteinase
OS=Lotus japonicus GN=LjCyp1 PE=2 SV=1,51.04,3e-18,no
description,NULL; Cysteine proteinases,NULL; CYSTEINE PROTEASE,NULL;
CYSTEINE PROTEASE FAMILY C1-,CUFF.49104.1
         (93 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079770.1 | papain family cysteine protease | HC | chr4:30...    92   7e-20
Medtr4g079470.1 | papain family cysteine protease | HC | chr4:30...    91   2e-19
Medtr4g079800.1 | papain family cysteine protease | HC | chr4:30...    91   3e-19
Medtr5g022560.1 | papain family cysteine protease | HC | chr5:88...    85   2e-17
Medtr4g047610.1 | papain family cysteine protease | HC | chr4:16...    80   5e-16
Medtr4g107930.1 | papain family cysteine protease | HC | chr4:44...    80   6e-16
Medtr2g075830.1 | papain family cysteine protease | HC | chr2:31...    74   3e-14
Medtr4g080730.1 | papain family cysteine protease | HC | chr4:31...    70   3e-13
Medtr4g080700.1 | papain family cysteine protease | HC | chr4:31...    67   5e-12
Medtr4g080360.1 | papain family cysteine protease | HC | chr4:31...    63   6e-11
Medtr2g083930.1 | papain family cysteine protease | HC | chr2:35...    58   2e-09
Medtr2g015840.1 | papain family cysteine protease | LC | chr2:47...    55   1e-08
Medtr2g066980.1 | papain family cysteine protease | LC | chr2:28...    55   2e-08
Medtr2g067900.1 | papain family cysteine protease | LC | chr2:28...    54   4e-08
Medtr2g067560.1 | papain family cysteine protease | HC | chr2:28...    53   6e-08
Medtr2g015850.1 | papain family cysteine protease | HC | chr2:47...    51   2e-07
Medtr4g079440.1 | papain family cysteine protease | HC | chr4:30...    50   6e-07
Medtr2g064475.1 | papain family cysteine protease | LC | chr2:27...    48   2e-06
Medtr7g079230.1 | papain family cysteine protease | LC | chr7:30...    48   2e-06
Medtr3g116080.1 | papain family cysteine protease | HC | chr3:54...    47   4e-06

>Medtr4g079770.1 | papain family cysteine protease | HC |
           chr4:30880789-30882078 | 20130731
          Length = 345

 Score = 92.4 bits (228), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 5/97 (5%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG--KSYRLGLKEFFYLTNDKN 59
           +HE+W   YG+VYKD QER  RL I K+NV+YIE SN AG  K Y+LG+ +F  LTN++ 
Sbjct: 40  KHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADLTNEEF 99

Query: 60  IAQRNGLK---VSKVMRSTSFRYENVRVSCWVDRREE 93
           IA RN  K    S + ++++F+YEN  V   VD R++
Sbjct: 100 IASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKK 136


>Medtr4g079470.1 | papain family cysteine protease | HC |
           chr4:30720667-30719276 | 20130731
          Length = 345

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/97 (48%), Positives = 65/97 (67%), Gaps = 5/97 (5%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG--KSYRLGLKEFFYLTNDKN 59
           +HE+W   YG+VYKD QER  RL I K+NV+YIE SN AG  K Y+LG+ +F  LTN++ 
Sbjct: 40  KHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADLTNEEF 99

Query: 60  IAQRNGLK---VSKVMRSTSFRYENVRVSCWVDRREE 93
           IA RN  K    S + ++++F+YEN  V   VD R++
Sbjct: 100 IASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKK 136


>Medtr4g079800.1 | papain family cysteine protease | HC |
           chr4:30891837-30893129 | 20130731
          Length = 345

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 5/97 (5%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG--KSYRLGLKEFFYLTNDKN 59
           +HE+W   YG+VYKD QER  RL I K+NV+YIE SN AG  K Y+LG+ +F  +TN++ 
Sbjct: 40  KHEQWMVHYGKVYKDLQERENRLKIFKENVNYIEASNNAGNNKLYKLGINQFADITNEEF 99

Query: 60  IAQRNGLK---VSKVMRSTSFRYENVRVSCWVDRREE 93
           IA RN  K    S + ++++F+YEN  V   VD R++
Sbjct: 100 IASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKK 136


>Medtr5g022560.1 | papain family cysteine protease | HC |
           chr5:8898326-8899733 | 20130731
          Length = 344

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 6/98 (6%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKA--GKSYRLGLKEFFYLTNDKN 59
           RHERW   YG+VYKD QER +R  I  +N+ YIE  N     +SY+LG+ +F  LTN++ 
Sbjct: 38  RHERWMNHYGKVYKDHQEREKRFKIFTENMKYIEAFNNGDNNESYKLGINQFADLTNEEF 97

Query: 60  IAQRNGLK---VSKVMRSTSFRYENVR-VSCWVDRREE 93
           +A RN  K    S ++R+T+F+YENV  +   VD R++
Sbjct: 98  VASRNKFKGHMCSSIIRTTTFKYENVSAIPSTVDWRKK 135


>Medtr4g047610.1 | papain family cysteine protease | HC |
           chr4:16868445-16867071 | 20130731
          Length = 343

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 5/85 (5%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKA--GKSYRLGLKEFFYLTNDKN 59
           RH +W +QYG+VYKD QER +R  I  +NV+YIE  NK    K Y LG+ +F  LTND+ 
Sbjct: 37  RHRQWMSQYGKVYKDSQEREKRFKIFTENVNYIEAFNKGDNNKLYTLGVNQFADLTNDEF 96

Query: 60  IAQRNGLK---VSKVMRSTSFRYEN 81
            + RN  K    S + R+++F+YEN
Sbjct: 97  TSSRNKFKGHMCSSITRTSTFKYEN 121


>Medtr4g107930.1 | papain family cysteine protease | HC |
           chr4:44732137-44730694 | 20130731
          Length = 345

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 6/98 (6%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG--KSYRLGLKEFFYLTNDKN 59
           RHE+W +QY +VYKD QER  R  I   NV+YIE  N     K Y+LG+ +F  LTN++ 
Sbjct: 39  RHEQWMSQYSKVYKDPQEREERHKIFTANVNYIEVFNNDANNKLYKLGINQFADLTNEEF 98

Query: 60  IAQRNGLK---VSKVMRSTSFRYENVR-VSCWVDRREE 93
           IA RN  K    S + ++T+F+YENV  +   VD R++
Sbjct: 99  IASRNKFKGHMCSSIAKTTTFKYENVSAIPSTVDWRKK 136


>Medtr2g075830.1 | papain family cysteine protease | HC |
           chr2:31726251-31727821 | 20130731
          Length = 341

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 7/96 (7%)

Query: 3   HERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNIA 61
           HE+W  Q+G+VYK   E+ +R  I K+NV+YIE  N  G KSY+LGL  F  LTN + IA
Sbjct: 39  HEQWMVQHGKVYKAAHEKQKRFGIFKENVNYIEAFNNVGNKSYKLGLNHFADLTNHEFIA 98

Query: 62  QRNGLKVSKVMRS---TSFRYENVR-VSCWVDRREE 93
            RN  K +  +     T+F+Y+NV  V   VD R+E
Sbjct: 99  ARN--KFNGYLHGSIITTFKYKNVSDVPSAVDWRQE 132


>Medtr4g080730.1 | papain family cysteine protease | HC |
           chr4:31195577-31193936 | 20130731
          Length = 340

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKA-GKSYRLGLKEFFYLTNDKNI 60
           RHE+W ++YG++YKD  E+ +R  I K NV++IE+ N A  K Y+L +     LT D+  
Sbjct: 39  RHEQWMSEYGKLYKDAIEKEKRFMIFKDNVEFIESFNAADNKPYKLSVNHLADLTLDEFK 98

Query: 61  AQRNGL-KVSKVMRSTSFRYENV 82
           A RNG  K+ +   +TSF+YENV
Sbjct: 99  ASRNGYKKIDREFATTSFKYENV 121


>Medtr4g080700.1 | papain family cysteine protease | HC |
           chr4:31186744-31185065 | 20130731
          Length = 340

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 2/83 (2%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKA-GKSYRLGLKEFFYLTNDKNI 60
           RHE+W  ++G+VY+D  E+ +R  I K NV++IE+ N A  + Y+L +     LT D+  
Sbjct: 39  RHEQWMTEHGKVYEDAIEKEKRFMIFKDNVEFIESFNAADNQPYKLSVNHLADLTLDEFK 98

Query: 61  AQRNGL-KVSKVMRSTSFRYENV 82
           A RNG  K+ +   +TSF+YENV
Sbjct: 99  ASRNGYKKIDREFTTTSFKYENV 121


>Medtr4g080360.1 | papain family cysteine protease | HC |
           chr4:31178403-31176385 | 20130731
          Length = 342

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNI 60
           +HE+W  Q+G+ YKD  E+ +R  I K NV++IE  N  G K + L +  F  LTN++  
Sbjct: 36  KHEKWMTQFGKSYKDAAEKEKRFQIFKNNVEFIELFNAVGNKPFNLSINHFADLTNEEFK 95

Query: 61  AQRNGL-----KVSKVMRSTSFRYENV 82
           A  NG      K   +  +TSFRY NV
Sbjct: 96  ASLNGNKKLHDKFDILNETTSFRYHNV 122


>Medtr2g083930.1 | papain family cysteine protease | HC |
           chr2:35231037-35228046 | 20130731
          Length = 344

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 10/101 (9%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKS-YRLGLKEFFYLTNDKNI 60
           +HE+W  ++G+ YKD  E+ +R  I K+N+++IE+ N AG + + L + +F   TND+  
Sbjct: 34  KHEQWMEEHGKFYKDAAEKEQRFQIFKENLEFIESFNAAGDNGFNLSINQFGDQTNDEFK 93

Query: 61  AQR-NGLK-------VSKVMRSTSFRYENV-RVSCWVDRRE 92
           A   NG K       ++ +   + FRYENV  V   +D RE
Sbjct: 94  ANYLNGKKKPLIGVGIAAIEEESVFRYENVTEVPATMDWRE 134


>Medtr2g015840.1 | papain family cysteine protease | LC |
           chr2:4735030-4736569 | 20130731
          Length = 272

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 3   HERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNIA 61
           H++W  +Y R Y +  E  +R  I K+N++YIE  N  G KSY+LGL  +  LT+++ IA
Sbjct: 33  HQQWMMKYERTYTNSSEMEKRKKIFKENLEYIENFNNVGNKSYKLGLNRYSDLTSEEFIA 92

Query: 62  QRNGLKVSKVMRSTSFR 78
              G KVS  +  +  R
Sbjct: 93  SHTGFKVSDQLSDSKMR 109


>Medtr2g066980.1 | papain family cysteine protease | LC |
          chr2:28003563-28004930 | 20130731
          Length = 323

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 3  HERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLT 55
          HE+W   +GR Y D+ E+ +R  I  KN++YIE  N+AG ++Y LGL +F  LT
Sbjct: 34 HEQWMKDFGRTYADDVEKEKRFKIFAKNLEYIENFNRAGNETYELGLNQFLDLT 87


>Medtr2g067900.1 | papain family cysteine protease | LC |
           chr2:28418529-28417363 | 20130731
          Length = 328

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 1   MRHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKN 59
           MRHE+W  ++GR Y D+ E+ +R  I  + ++YIE  N+ G  +Y LGL ++  LT+++ 
Sbjct: 14  MRHEQWMKEFGRTYADDAEKNKRFKIFAEKLEYIENFNRDGNATYELGLNQYSDLTDEEY 73

Query: 60  IAQRNGLKV-SKVMRSTSFRYENVRVS 85
           +A+ + +K  SKV  S+      +  +
Sbjct: 74  VAKYSCIKFQSKVNYSSILNVSEISTT 100


>Medtr2g067560.1 | papain family cysteine protease | HC |
          chr2:28285028-28279801 | 20130731
          Length = 906

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)

Query: 2  RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGK-SYRLGLKEFFYLTNDKNI 60
          R+E+W  ++ R Y D+ E+ +R  I  +N++YIE  N+AGK +Y+LGL +F  LTN++  
Sbjct: 15 RYEQWMKEFERNYADDAEKEKRFKIFAENLEYIENFNRAGKQTYKLGLNQFSDLTNEEFA 74

Query: 61 AQRNGLKVSKVMRST 75
          A  N + + + + S+
Sbjct: 75 ALYNCVDLKRELESS 89


>Medtr2g015850.1 | papain family cysteine protease | HC |
           chr2:4742638-4745104 | 20130731
          Length = 364

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 22  RRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNIAQRNGLKVSKVMRSTSFR 78
           +R  I K N++YIE  N AG KSY+LGL ++  LT+D+ +A   GLKVSK + S+  R
Sbjct: 81  KRKRIFKNNLEYIENFNNAGNKSYKLGLNQYSDLTSDEFLASHTGLKVSKQLSSSKMR 138


>Medtr4g079440.1 | papain family cysteine protease | HC |
           chr4:30713897-30712622 | 20130731
          Length = 345

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 39/79 (49%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKSYRLGLKEFFYLTNDKNIA 61
           R + W  ++GR YK   ER  R  I + NV YI+  N    SY L   +F  LTN++  +
Sbjct: 45  RFDGWVKRHGRKYKHNDEREVRFGIYQANVQYIQCKNAQKNSYNLTDNKFADLTNEEFQS 104

Query: 62  QRNGLKVSKVMRSTSFRYE 80
              GL       +T FRY+
Sbjct: 105 TYMGLSTRLRSHNTGFRYD 123


>Medtr2g064475.1 | papain family cysteine protease | LC |
          chr2:27348422-27349665 | 20130731
          Length = 353

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 2  RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLT 55
          RHE+W  ++GR Y+D+ E+ +R  I  + ++YIE  N+ G ++Y LGL +F  LT
Sbjct: 15 RHEQWMKEFGRSYEDDAEKEKRFKIFAEKLEYIERFNRDGNETYELGLNQFSDLT 69


>Medtr7g079230.1 | papain family cysteine protease | LC |
           chr7:30057324-30056171 | 20130731
          Length = 340

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 7/95 (7%)

Query: 2   RHERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAG-KSYRLGLKEFFYLTNDKNI 60
           R++ W  +Y  +YKD+ E  + + I K NV YI++ N AG KSY+L +  F  L  +   
Sbjct: 38  RYKHWKIKYRVIYKDDAEEEKHIQIFKHNVAYIDSFNAAGNKSYKLTINRFADLPTE--- 94

Query: 61  AQRNGLKVSKVMRSTS--FRYENVR-VSCWVDRRE 92
              +G K  K+  +TS  F+Y+N+  +   VD R+
Sbjct: 95  PSDDGFKKRKLEPTTSSLFKYKNITDIPAAVDWRK 129


>Medtr3g116080.1 | papain family cysteine protease | HC |
           chr3:54276528-54278225 | 20130731
          Length = 350

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 4   ERWCAQYGRVYKDEQERLRRLDISKKNVDYIETSNKAGKSYRLGLKEFFYLTNDKNIAQR 63
           E W +++G++Y+  +E+L R ++ K N+ +I+  NK   +Y LGL EF  L++ +   + 
Sbjct: 48  ESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKVVSNYWLGLNEFADLSHQEFKNKY 107

Query: 64  NGLKVSKVMRSTS----FRYENVRVSCWVDRR 91
            GLKV    R  S    F Y +V +   VD R
Sbjct: 108 LGLKVDLSQRRESSEEEFTYRDVDLPKSVDWR 139