Miyakogusa Predicted Gene

Lj4g3v1386900.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1386900.2 Non Characterized Hit- tr|I1MUQ6|I1MUQ6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.33,0,seg,NULL;
INTEGRATOR COMPLEX SUBUNIT 11,NULL; CLEAVAGE AND POLYADENYLATION
SPECIFICITY FACTOR,NULL,CUFF.49095.2
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102870.1 | zinc finger, C3HC4 type (RING finger) protein ...   254   2e-68
Medtr5g010720.1 | zinc finger, C3HC4 type (RING finger) protein ...   238   2e-63
Medtr7g076010.1 | RING zinc finger protein, putative | HC | chr7...   183   6e-47
Medtr8g105330.1 | zinc finger, C3HC4 type (RING finger) protein ...   159   6e-40
Medtr1g032440.1 | zinc finger (C3HC4-type RING finger) family pr...   147   3e-36
Medtr1g032440.2 | zinc finger (C3HC4-type RING finger) family pr...   128   2e-30
Medtr7g088500.1 | E3 ubiquitin protein ligase RIE1-like protein ...   116   7e-27
Medtr3g107995.1 | zinc finger, C3HC4 type (RING finger) protein,...    79   1e-15
Medtr1g011380.1 | zinc finger, C3HC4 type (RING finger) protein ...    65   2e-11
Medtr7g088560.1 | RING-finger ubiquitin ligase | HC | chr7:34509...    63   1e-10
Medtr7g088570.1 | C3HC4-type RING zinc finger protein | LC | chr...    53   9e-08

>Medtr4g102870.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr4:42646068-42652015 | 20130731
          Length = 371

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/150 (81%), Positives = 129/150 (86%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
           MAKHLESANTMFSFIWWVIGFYWVSADGQ L  DSP LYWLCI            CIALA
Sbjct: 177 MAKHLESANTMFSFIWWVIGFYWVSADGQDLIHDSPNLYWLCIVFLGFDVFFVVFCIALA 236

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIM 120
           CIIGIAVCCCLPCIIALLYAVADQEGA++EDIEQLSKFKFQRKSNEKLA +T+GPVGGIM
Sbjct: 237 CIIGIAVCCCLPCIIALLYAVADQEGATKEDIEQLSKFKFQRKSNEKLADNTQGPVGGIM 296

Query: 121 TECHSDSPTEHMLSAEDAECCICLSAYDDG 150
            EC +DSP EH+L+ EDAECCICLSAYDDG
Sbjct: 297 IECQADSPIEHVLADEDAECCICLSAYDDG 326


>Medtr5g010720.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr5:2925922-2918994 | 20130731
          Length = 387

 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/151 (76%), Positives = 129/151 (85%), Gaps = 1/151 (0%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
           +AKHLESANTMFSFIWW+IGFYWVSA GQ LAQDSPQLYWLCI            C+ALA
Sbjct: 192 VAKHLESANTMFSFIWWIIGFYWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVFCVALA 251

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQR-KSNEKLAGDTEGPVGGI 119
           C+IGIAVCCCLPCIIALLYAVADQEGAS+EDIEQLSKFKF++ +SNEK   + +GPVGGI
Sbjct: 252 CVIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRKVESNEKQTDNNQGPVGGI 311

Query: 120 MTECHSDSPTEHMLSAEDAECCICLSAYDDG 150
           MTEC +DSP EH+L+ EDAECCICLS+YDDG
Sbjct: 312 MTECRADSPIEHVLAEEDAECCICLSSYDDG 342


>Medtr7g076010.1 | RING zinc finger protein, putative | HC |
           chr7:28563510-28559568 | 20130731
          Length = 366

 Score =  183 bits (464), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 115/150 (76%), Gaps = 1/150 (0%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
           + KH+ESANT+ SFIWW++GFYWV+  GQ+L +DSPQLYWLCI            C+A+A
Sbjct: 174 IIKHIESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCITFLAFDVVIVVICVAVA 233

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIM 120
           C+IGIAVCCCLPCI+A+LYAVADQ GA+ E+I+QL K+KF+     K  GD +    G+M
Sbjct: 234 CLIGIAVCCCLPCILAILYAVADQ-GATMEEIDQLPKYKFRMIKESKEEGDAQESSRGVM 292

Query: 121 TECHSDSPTEHMLSAEDAECCICLSAYDDG 150
           TEC +D+ +EH+++ EDAECCICLSAYDDG
Sbjct: 293 TECDNDTASEHVIALEDAECCICLSAYDDG 322


>Medtr8g105330.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr8:44439492-44443627 | 20130731
          Length = 336

 Score =  159 bits (403), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 77/150 (51%), Positives = 96/150 (64%), Gaps = 5/150 (3%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
            AK   S NTM S +WW++GFYWV   G  L QD+P+LYWL +            C+ALA
Sbjct: 149 FAKRCSSLNTMLSLLWWMVGFYWVVNGGDILIQDAPRLYWLAVVFLAFDVFFAVFCVALA 208

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIM 120
           C+IGIA+CCCLPCII +LYAVA QEGAS+ D+  L K++FQ   NE    +T  P GG M
Sbjct: 209 CLIGIALCCCLPCIIGILYAVAGQEGASESDLSTLPKYRFQVPGNE----ETPSPKGGSM 264

Query: 121 TEC-HSDSPTEHMLSAEDAECCICLSAYDD 149
               +S    E +LS EDAECCIC+S Y+D
Sbjct: 265 VPIENSSGANERVLSPEDAECCICISPYED 294


>Medtr1g032440.1 | zinc finger (C3HC4-type RING finger) family
           protein | HC | chr1:11531767-11536322 | 20130731
          Length = 350

 Score =  147 bits (371), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/153 (49%), Positives = 97/153 (63%), Gaps = 7/153 (4%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
             K  ES NT  SF+WW++GFYWV +    L QD+P+LYWL +            C+ LA
Sbjct: 161 FTKRCESINTGVSFLWWMVGFYWVVSGDDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLA 220

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIM 120
           C+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+  L K++F+  +NE+   D+ G   G M
Sbjct: 221 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRLSNNEE--KDSGG--AGSM 276

Query: 121 TECHSDS---PTEHMLSAEDAECCICLSAYDDG 150
               + S    TE +L  EDAECCICL  Y+DG
Sbjct: 277 VPIETTSAYLATERILLPEDAECCICLCPYEDG 309


>Medtr1g032440.2 | zinc finger (C3HC4-type RING finger) family
           protein | HC | chr1:11531767-11536305 | 20130731
          Length = 317

 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/141 (46%), Positives = 87/141 (61%), Gaps = 7/141 (4%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
             K  ES NT  SF+WW++GFYWV +    L QD+P+LYWL +            C+ LA
Sbjct: 161 FTKRCESINTGVSFLWWMVGFYWVVSGDDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLA 220

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIM 120
           C+IGIA+CCCLPCIIA+LYAVA QEGAS+ D+  L K++F+  +NE+   D+ G   G M
Sbjct: 221 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRLSNNEE--KDSGG--AGSM 276

Query: 121 TECHSDS---PTEHMLSAEDA 138
               + S    TE +L  EDA
Sbjct: 277 VPIETTSAYLATERILLPEDA 297


>Medtr7g088500.1 | E3 ubiquitin protein ligase RIE1-like protein |
           HC | chr7:34479004-34482328 | 20130731
          Length = 297

 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 2/151 (1%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
           +AK LE  NT+ S +WWV GFYW+   GQ L +DSP+LYWL +            CI +A
Sbjct: 107 IAKKLEPMNTLASSVWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMA 166

Query: 61  CIIGIAVCCCLPCIIALLYAVADQEGASQEDIEQLSKFKFQRKSNEKLAGDTEGP-VGGI 119
           CI+  A+ C +P IIAL YA+  +EGAS++DI  L  ++F + +   +  D +   V   
Sbjct: 167 CIVFFALFCIIP-IIALAYALRIREGASEDDISSLPMYRFSQSNVMVMVDDNKKQHVKAK 225

Query: 120 MTECHSDSPTEHMLSAEDAECCICLSAYDDG 150
           +   +    +E  L  +D+ECCICL  Y DG
Sbjct: 226 IGSYNPSHISELSLHPDDSECCICLCPYVDG 256


>Medtr3g107995.1 | zinc finger, C3HC4 type (RING finger) protein,
           putative | HC | chr3:49902732-49905143 | 20130731
          Length = 392

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 18/157 (11%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCI--A 58
           + ++ ++   +F  IW+VIG  W+   G   A D+P LY LCI            CI  A
Sbjct: 180 LMEYFKTTLDLFFAIWFVIGNVWIFG-GHASANDAPNLYRLCIVFLTFS------CIGYA 232

Query: 59  LACIIGIAVCCCLPCIIALLYAVAD---QEGASQEDIEQLSKFKFQRKSNEKLAGDTEGP 115
           +  I+ + +CCCLPCII+ L    D     GA+ E I  L    F+   ++        P
Sbjct: 233 MPFILCLTICCCLPCIISTLGVTEDLTQTRGATSESINALPTHIFKTMKSKSNDESDNIP 292

Query: 116 V---GGIMTECHSDSPTEHMLSAEDAECCICLSAYDD 149
           V   GGI+ E    +  E M+S EDA CCIC++ Y++
Sbjct: 293 VVIEGGIVAE---GTEKERMISGEDAVCCICIANYEN 326


>Medtr1g011380.1 | zinc finger, C3HC4 type (RING finger) protein |
           HC | chr1:2002136-1996826 | 20130731
          Length = 403

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 14/144 (9%)

Query: 12  FSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCI--ALACIIGIAVCC 69
           F  +W+V+G  W+   G++ A  +P LY LCI            CI  A+  I+   +CC
Sbjct: 217 FFAVWFVVGNVWIFG-GRSSAAVAPNLYRLCIVFLAFS------CIGYAMPFILCSTICC 269

Query: 70  CLPCIIALLYAVAD---QEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIMTECHSD 126
           CLPCII++L    D     GA+ E I  L  +KF+ K N+K + +    + G      ++
Sbjct: 270 CLPCIISILGVREDLSQNRGATSESINALPTYKFKMKKNKKNSENNSANIDGGTVAAGTE 329

Query: 127 SPTEHMLSAEDAECCICLSAYDDG 150
              E ++S EDA CCICL+ Y++ 
Sbjct: 330 K--ERVISGEDAVCCICLAKYENN 351


>Medtr7g088560.1 | RING-finger ubiquitin ligase | HC |
           chr7:34509725-34514202 | 20130731
          Length = 188

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)

Query: 9   NTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALACIIGIAVC 68
           NT+ S +WWV  F  +   GQ L +    L WL                + +C+I     
Sbjct: 2   NTLASSVWWVFVFSSIVVGGQALVEAPFLLLWLTFVCLAFNGFCDGIS-SFSCLIVFGAL 60

Query: 69  CCLPCIIALLYAVAD----QEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPVGGIMTECH 124
            C+  II L YA+      +EGAS++DI+ L  ++F + +   +    +  +       H
Sbjct: 61  FCIIQIIVLAYALVQPLRIREGASEDDIKSLPMYRFSQPNVMIMVDKNKKQLDEARIGSH 120

Query: 125 SDSP-TEHMLSAEDAECCICLSAYDDG 150
           + S  +E  L  +D+ECCICL +Y DG
Sbjct: 121 NQSHISELSLHPDDSECCICLCSYVDG 147


>Medtr7g088570.1 | C3HC4-type RING zinc finger protein | LC |
           chr7:34515457-34518367 | 20130731
          Length = 294

 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 6/155 (3%)

Query: 1   MAKHLESANTMFSFIWWVIGFYWVSADGQTLAQDSPQLYWLCIXXXXXXXXXXXXCIALA 60
           +AK  E  NT+    + V GF  +   GQ L +    L+ L +                 
Sbjct: 100 IAKKTEPMNTLVLSAFLVFGFSCIVVGGQALVEVPFLLFGLTMVCLSLNEFFDAVFSFWI 159

Query: 61  CIIGIAVCCCLPCIIALLYAVAD----QEGASQEDIEQLSKFKFQRKSNEKLAGDTEGPV 116
            +I      C+  IIAL YA+      +EGAS++DI+ L  ++F  + N  +  D     
Sbjct: 160 YLIVFGALFCIVQIIALAYALTQPLRIREGASEDDIKSLPMYRFC-QPNVMIMVDKNKTQ 218

Query: 117 GGIMTECHSDSP-TEHMLSAEDAECCICLSAYDDG 150
               T  H+ S  +E  L  +D+ECCICL  Y DG
Sbjct: 219 LEARTGSHNRSHISELSLHPDDSECCICLCPYVDG 253