Miyakogusa Predicted Gene

Lj4g3v1355820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1355820.1 Non Characterized Hit- tr|I1MUQ9|I1MUQ9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.23,0,GPI
TRANSAMIDASE COMPONENT PIG-U,GPI transamidase subunit PIG-U; PIG-U,GPI
transamidase subunit PIG-,CUFF.49090.1
         (298 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102820.1 | GPI transamidase subunit PIG-U | HC | chr4:426...   455   e-128
Medtr4g102820.2 | GPI transamidase subunit PIG-U | HC | chr4:426...   403   e-112

>Medtr4g102820.1 | GPI transamidase subunit PIG-U | HC |
           chr4:42618003-42624832 | 20130731
          Length = 480

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 226/299 (75%), Positives = 243/299 (81%), Gaps = 1/299 (0%)

Query: 1   MVVLSLYGACTRLAPVAAFGWVMATHFSLYPSILFIPVILLFGYGPDAPPRKLFWLRKNH 60
           MVV++LYGAC RLAP+AAFGWVMATH SLYP+IL IPVILLFGYGPDAPPRKLF  R N 
Sbjct: 182 MVVVTLYGACARLAPLAAFGWVMATHLSLYPAILIIPVILLFGYGPDAPPRKLFRQRTNL 241

Query: 61  KVDNSTSSNRSCLE-EVDNEPREPYLFSWRPVVHFLFWTLLWSSYVLVLCGIYVHHHGGL 119
           +VD+S S +RSCLE E+ NE R   +FSWRPVV FLFW LLWSSYVLVLCGIYV  H GL
Sbjct: 242 EVDDSASGDRSCLEDELVNEKRMLNVFSWRPVVLFLFWALLWSSYVLVLCGIYVQQHSGL 301

Query: 120 QEMLKRTYGFILTIQDLSPNIGVLWYXXXXXXXXXXXXXXXXXHGNILLMIVPLALRLNH 179
           QEM K TYGFILTIQDLSPNIGV WY                 HGNILLMI+PLALRLNH
Sbjct: 302 QEMFKSTYGFILTIQDLSPNIGVFWYFFAEVFDFFRSFFLIVFHGNILLMILPLALRLNH 361

Query: 180 RPCFLAFVYVVISSMLKSYPSVGDSXXXXXXXXXXXXXXKDMQFSFFLFSGYIGVSLLSP 239
           RPCFLAFVY+V+SSMLKSYPSVGDS              KDMQFSFFLFSGY+GVSLLSP
Sbjct: 362 RPCFLAFVYIVLSSMLKSYPSVGDSALYLGLLGLFAYELKDMQFSFFLFSGYVGVSLLSP 421

Query: 240 VMHNLWLWWGTGNANFYFATAIGYACLQIILVVESVSSMLNHDRMLTKLSTAKLQNAKS 298
           VMHNLW+W GTGNANFYFATAIGYACLQIILVVESVS+MLNHDRM+TKL+TAKLQN KS
Sbjct: 422 VMHNLWIWRGTGNANFYFATAIGYACLQIILVVESVSAMLNHDRMITKLTTAKLQNVKS 480


>Medtr4g102820.2 | GPI transamidase subunit PIG-U | HC |
           chr4:42618003-42624013 | 20130731
          Length = 478

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/277 (72%), Positives = 218/277 (78%), Gaps = 1/277 (0%)

Query: 1   MVVLSLYGACTRLAPVAAFGWVMATHFSLYPSILFIPVILLFGYGPDAPPRKLFWLRKNH 60
           MVV++LYGAC RLAP+AAFGWVMATH SLYP+IL IPVILLFGYGPDAPPRKLF  R N 
Sbjct: 182 MVVVTLYGACARLAPLAAFGWVMATHLSLYPAILIIPVILLFGYGPDAPPRKLFRQRTNL 241

Query: 61  KVDNSTSSNRSCLE-EVDNEPREPYLFSWRPVVHFLFWTLLWSSYVLVLCGIYVHHHGGL 119
           +VD+S S +RSCLE E+ NE R   +FSWRPVV FLFW LLWSSYVLVLCGIYV  H GL
Sbjct: 242 EVDDSASGDRSCLEDELVNEKRMLNVFSWRPVVLFLFWALLWSSYVLVLCGIYVQQHSGL 301

Query: 120 QEMLKRTYGFILTIQDLSPNIGVLWYXXXXXXXXXXXXXXXXXHGNILLMIVPLALRLNH 179
           QEM K TYGFILTIQDLSPNIGV WY                 HGNILLMI+PLALRLNH
Sbjct: 302 QEMFKSTYGFILTIQDLSPNIGVFWYFFAEVFDFFRSFFLIVFHGNILLMILPLALRLNH 361

Query: 180 RPCFLAFVYVVISSMLKSYPSVGDSXXXXXXXXXXXXXXKDMQFSFFLFSGYIGVSLLSP 239
           RPCFLAFVY+V+SSMLKSYPSVGDS              KDMQFSFFLFSGY+GVSLLSP
Sbjct: 362 RPCFLAFVYIVLSSMLKSYPSVGDSALYLGLLGLFAYELKDMQFSFFLFSGYVGVSLLSP 421

Query: 240 VMHNLWLWWGTGNANFYFATAIGYACLQIILVVESVS 276
           VMHNLW+W GTGNANFYFATAIGYACLQ++ +   +S
Sbjct: 422 VMHNLWIWRGTGNANFYFATAIGYACLQVLYLFSLIS 458