Miyakogusa Predicted Gene

Lj4g3v1345740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1345740.1 tr|C1EDN1|C1EDN1_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_102962,29.97,6e-16,seg,NULL,
NODE_36423_length_1396_cov_118.570915.path1.1
         (430 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116540.1 | hypothetical protein | HC | chr1:52724529-5272...   455   e-128
Medtr1g116540.4 | hypothetical protein | HC | chr1:52724524-5272...   449   e-126
Medtr1g116540.2 | hypothetical protein | HC | chr1:52724529-5272...   434   e-122
Medtr1g116540.3 | hypothetical protein | HC | chr1:52724524-5272...   428   e-120

>Medtr1g116540.1 | hypothetical protein | HC |
           chr1:52724529-52728577 | 20130731
          Length = 434

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/352 (66%), Positives = 267/352 (75%), Gaps = 13/352 (3%)

Query: 89  GKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAALTFLVLSVFRVLVQLVSGFGSWR 148
           GK+AYRDLQTLFT+D NRR+++SCRPSTLHFVGTSAALT +  SV RV  +LVS F SW 
Sbjct: 82  GKEAYRDLQTLFTIDHNRRVIISCRPSTLHFVGTSAALTLIAFSVLRVFFELVSRFASWS 141

Query: 149 -RNASTYKP--VVRRDRSLGGKEVVIAWGESQSQSTPASRVQRT--AIAKNKVRVEKKLP 203
            RN S+Y    +VRRDRSLGGKEVVI      S +TPA  ++R+      NKV  ++KLP
Sbjct: 142 SRNPSSYNKGIMVRRDRSLGGKEVVIGLSPIHS-TTPALPIKRSLKNSNNNKVVSQRKLP 200

Query: 204 KWWPSVINNAAVVFDV--NERDEYKREAYRVVRAIVDNRMGGRDISEDDIIRLRQLCRFS 261
           KWWP + NN    FD+  NE+DEYKR+AYR+VR+I+D+RM  +DIS+ DII+LRQLCR S
Sbjct: 201 KWWPPINNNNVNAFDMDLNEQDEYKRDAYRLVRSIIDSRMAAKDISKHDIIQLRQLCRNS 260

Query: 262 GVQVSVEPTNIRDSLYRASVNYVLDACSSAPTTSTSIDINGEDAQQFLAGFAENIGLENX 321
           GVQVSVEPTNIR+SLYRASVN+VLDACSSAPT STS+ INGED+QQFLAGFAENIGLEN 
Sbjct: 261 GVQVSVEPTNIRESLYRASVNFVLDACSSAPTYSTSVHINGEDSQQFLAGFAENIGLENV 320

Query: 322 XXXXXXXXXXXXSTRSRLLQAWALEMQGKHVDATVELSKICLLLRIFXXXXXXXXXXXVS 381
                        TRS LLQAWALEMQGKHVDA  ELSKICLLLRIF           VS
Sbjct: 321 RAATIVSAAVAARTRSCLLQAWALEMQGKHVDALGELSKICLLLRIFPPEESSPEMEMVS 380

Query: 382 RGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREALGLMHSD-----QLEDKM 428
           RGL+KHLKLEQRKHLMFLFGKVC EDSH IAREALGL HS      QLED +
Sbjct: 381 RGLEKHLKLEQRKHLMFLFGKVCSEDSHGIAREALGLTHSQNYCAGQLEDNI 432


>Medtr1g116540.4 | hypothetical protein | HC |
           chr1:52724524-52728577 | 20130731
          Length = 421

 Score =  449 bits (1154), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 229/340 (67%), Positives = 262/340 (77%), Gaps = 8/340 (2%)

Query: 89  GKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAALTFLVLSVFRVLVQLVSGFGSWR 148
           GK+AYRDLQTLFT+D NRR+++SCRPSTLHFVGTSAALT +  SV RV  +LVS F SW 
Sbjct: 82  GKEAYRDLQTLFTIDHNRRVIISCRPSTLHFVGTSAALTLIAFSVLRVFFELVSRFASWS 141

Query: 149 -RNASTYKP--VVRRDRSLGGKEVVIAWGESQSQSTPASRVQRT--AIAKNKVRVEKKLP 203
            RN S+Y    +VRRDRSLGGKEVVI      S +TPA  ++R+      NKV  ++KLP
Sbjct: 142 SRNPSSYNKGIMVRRDRSLGGKEVVIGLSPIHS-TTPALPIKRSLKNSNNNKVVSQRKLP 200

Query: 204 KWWPSVINNAAVVFDV--NERDEYKREAYRVVRAIVDNRMGGRDISEDDIIRLRQLCRFS 261
           KWWP + NN    FD+  NE+DEYKR+AYR+VR+I+D+RM  +DIS+ DII+LRQLCR S
Sbjct: 201 KWWPPINNNNVNAFDMDLNEQDEYKRDAYRLVRSIIDSRMAAKDISKHDIIQLRQLCRNS 260

Query: 262 GVQVSVEPTNIRDSLYRASVNYVLDACSSAPTTSTSIDINGEDAQQFLAGFAENIGLENX 321
           GVQVSVEPTNIR+SLYRASVN+VLDACSSAPT STS+ INGED+QQFLAGFAENIGLEN 
Sbjct: 261 GVQVSVEPTNIRESLYRASVNFVLDACSSAPTYSTSVHINGEDSQQFLAGFAENIGLENV 320

Query: 322 XXXXXXXXXXXXSTRSRLLQAWALEMQGKHVDATVELSKICLLLRIFXXXXXXXXXXXVS 381
                        TRS LLQAWALEMQGKHVDA  ELSKICLLLRIF           VS
Sbjct: 321 RAATIVSAAVAARTRSCLLQAWALEMQGKHVDALGELSKICLLLRIFPPEESSPEMEMVS 380

Query: 382 RGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREALGLMHS 421
           RGL+KHLKLEQRKHLMFLFGKVC EDSH IAREALGL+ +
Sbjct: 381 RGLEKHLKLEQRKHLMFLFGKVCSEDSHGIAREALGLVRT 420


>Medtr1g116540.2 | hypothetical protein | HC |
           chr1:52724529-52728577 | 20130731
          Length = 442

 Score =  434 bits (1116), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/360 (64%), Positives = 264/360 (73%), Gaps = 21/360 (5%)

Query: 89  GKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAALTFLVLSVFRVLVQLVSGFGSWR 148
           GK+AYRDLQTLFT+D NRR+++SCRPSTLHFVGTSAALT +  SV RV  +LVS F SW 
Sbjct: 82  GKEAYRDLQTLFTIDHNRRVIISCRPSTLHFVGTSAALTLIAFSVLRVFFELVSRFASWS 141

Query: 149 -RNASTYKP--VVRRDRSLGGKEVVIAWGESQSQSTPASRVQRT--AIAKNKVRVEKKLP 203
            RN S+Y    +VRRDRSLGGKEVVI      S +TPA  ++R+      NKV  ++KLP
Sbjct: 142 SRNPSSYNKGIMVRRDRSLGGKEVVIGLSPIHS-TTPALPIKRSLKNSNNNKVVSQRKLP 200

Query: 204 KWWPSVINNAAVVFDV--NERDEYKREAYRVVRAIVDNRMGGRDISEDDIIRLRQLCRFS 261
           KWWP + NN    FD+  NE+DEYKR+AYR+VR+I+D+RM  +DIS+ DII+LRQLCR S
Sbjct: 201 KWWPPINNNNVNAFDMDLNEQDEYKRDAYRLVRSIIDSRMAAKDISKHDIIQLRQLCRNS 260

Query: 262 GVQVSVEPTNIRDSLYRASVNYVLDACS-----SAPTTSTS---IDINGEDAQQFLAGFA 313
           GVQVSVEPTNIR+SLYRASVN+VLDACS     S  + S S   + INGED+QQFLAGFA
Sbjct: 261 GVQVSVEPTNIRESLYRASVNFVLDACSRCDLRSPASVSLSLLLVHINGEDSQQFLAGFA 320

Query: 314 ENIGLENXXXXXXXXXXXXXSTRSRLLQAWALEMQGKHVDATVELSKICLLLRIFXXXXX 373
           ENIGLEN              TRS LLQAWALEMQGKHVDA  ELSKICLLLRIF     
Sbjct: 321 ENIGLENVRAATIVSAAVAARTRSCLLQAWALEMQGKHVDALGELSKICLLLRIFPPEES 380

Query: 374 XXXXXXVSRGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREALGLMHSD-----QLEDKM 428
                 VSRGL+KHLKLEQRKHLMFLFGKVC EDSH IAREALGL HS      QLED +
Sbjct: 381 SPEMEMVSRGLEKHLKLEQRKHLMFLFGKVCSEDSHGIAREALGLTHSQNYCAGQLEDNI 440


>Medtr1g116540.3 | hypothetical protein | HC |
           chr1:52724524-52728577 | 20130731
          Length = 429

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/348 (64%), Positives = 259/348 (74%), Gaps = 16/348 (4%)

Query: 89  GKDAYRDLQTLFTLDDNRRLVVSCRPSTLHFVGTSAALTFLVLSVFRVLVQLVSGFGSWR 148
           GK+AYRDLQTLFT+D NRR+++SCRPSTLHFVGTSAALT +  SV RV  +LVS F SW 
Sbjct: 82  GKEAYRDLQTLFTIDHNRRVIISCRPSTLHFVGTSAALTLIAFSVLRVFFELVSRFASWS 141

Query: 149 -RNASTYKP--VVRRDRSLGGKEVVIAWGESQSQSTPASRVQRT--AIAKNKVRVEKKLP 203
            RN S+Y    +VRRDRSLGGKEVVI      S +TPA  ++R+      NKV  ++KLP
Sbjct: 142 SRNPSSYNKGIMVRRDRSLGGKEVVIGLSPIHS-TTPALPIKRSLKNSNNNKVVSQRKLP 200

Query: 204 KWWPSVINNAAVVFDV--NERDEYKREAYRVVRAIVDNRMGGRDISEDDIIRLRQLCRFS 261
           KWWP + NN    FD+  NE+DEYKR+AYR+VR+I+D+RM  +DIS+ DII+LRQLCR S
Sbjct: 201 KWWPPINNNNVNAFDMDLNEQDEYKRDAYRLVRSIIDSRMAAKDISKHDIIQLRQLCRNS 260

Query: 262 GVQVSVEPTNIRDSLYRASVNYVLDACS-----SAPTTSTS---IDINGEDAQQFLAGFA 313
           GVQVSVEPTNIR+SLYRASVN+VLDACS     S  + S S   + INGED+QQFLAGFA
Sbjct: 261 GVQVSVEPTNIRESLYRASVNFVLDACSRCDLRSPASVSLSLLLVHINGEDSQQFLAGFA 320

Query: 314 ENIGLENXXXXXXXXXXXXXSTRSRLLQAWALEMQGKHVDATVELSKICLLLRIFXXXXX 373
           ENIGLEN              TRS LLQAWALEMQGKHVDA  ELSKICLLLRIF     
Sbjct: 321 ENIGLENVRAATIVSAAVAARTRSCLLQAWALEMQGKHVDALGELSKICLLLRIFPPEES 380

Query: 374 XXXXXXVSRGLQKHLKLEQRKHLMFLFGKVCGEDSHRIAREALGLMHS 421
                 VSRGL+KHLKLEQRKHLMFLFGKVC EDSH IAREALGL+ +
Sbjct: 381 SPEMEMVSRGLEKHLKLEQRKHLMFLFGKVCSEDSHGIAREALGLVRT 428