Miyakogusa Predicted Gene

Lj4g3v1345730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1345730.1 tr|I0YJA4|I0YJA4_9CHLO Nucleotide-sugar
transporter OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,50.56,0.000000000000002,NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,NULL; NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,Nucleoti,NODE_58417_length_612_cov_91.258171.path1.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116565.1 | UDP-galactose transporter | HC | chr1:52733664...   248   1e-66
Medtr1g116565.2 | UDP-galactose transporter | HC | chr1:52733772...   248   1e-66

>Medtr1g116565.1 | UDP-galactose transporter | HC |
           chr1:52733664-52738858 | 20130731
          Length = 408

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/131 (91%), Positives = 125/131 (95%), Gaps = 1/131 (0%)

Query: 3   NGMIECSVCHSKLVSPT-TKSISRAYDRHKSRITSKQRVLNFLLVGGDCILVGLQPILVY 61
           NGMIECSVCHSKLVSP  TK++SRAYDRHK+RITSKQRVLN LLVGGDC+LVG QPILVY
Sbjct: 7   NGMIECSVCHSKLVSPAATKTVSRAYDRHKNRITSKQRVLNILLVGGDCMLVGFQPILVY 66

Query: 62  MSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARNNVL 121
           MSKVDGKFNFSPISVNFLTEITKVFFAIVML LQARNQKVG+KPLLSIS FMQAARNNVL
Sbjct: 67  MSKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARNQKVGDKPLLSISTFMQAARNNVL 126

Query: 122 LAVPAFLYAIN 132
           LAVPAFLYAIN
Sbjct: 127 LAVPAFLYAIN 137


>Medtr1g116565.2 | UDP-galactose transporter | HC |
           chr1:52733772-52738432 | 20130731
          Length = 408

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 120/131 (91%), Positives = 125/131 (95%), Gaps = 1/131 (0%)

Query: 3   NGMIECSVCHSKLVSPT-TKSISRAYDRHKSRITSKQRVLNFLLVGGDCILVGLQPILVY 61
           NGMIECSVCHSKLVSP  TK++SRAYDRHK+RITSKQRVLN LLVGGDC+LVG QPILVY
Sbjct: 7   NGMIECSVCHSKLVSPAATKTVSRAYDRHKNRITSKQRVLNILLVGGDCMLVGFQPILVY 66

Query: 62  MSKVDGKFNFSPISVNFLTEITKVFFAIVMLFLQARNQKVGEKPLLSISIFMQAARNNVL 121
           MSKVDGKFNFSPISVNFLTEITKVFFAIVML LQARNQKVG+KPLLSIS FMQAARNNVL
Sbjct: 67  MSKVDGKFNFSPISVNFLTEITKVFFAIVMLLLQARNQKVGDKPLLSISTFMQAARNNVL 126

Query: 122 LAVPAFLYAIN 132
           LAVPAFLYAIN
Sbjct: 127 LAVPAFLYAIN 137