Miyakogusa Predicted Gene

Lj4g3v1345720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1345720.1 tr|Q6ZL17|Q6ZL17_ORYSJ Os07g0573700 protein
OS=Oryza sativa subsp. japonica GN=OJ1699_E05.21 PE=2
SV,31.63,6e-19,seg,NULL; Nuc_sug_transp,Nucleotide-sugar transporter;
NUCLEOTIDE-SUGAR TRANSMEMBRANE
TRANSPORTER,NU,NODE_9942_length_1394_cov_103.461983.path2.1
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116565.1 | UDP-galactose transporter | HC | chr1:52733664...   466   e-131
Medtr1g116565.2 | UDP-galactose transporter | HC | chr1:52733772...   466   e-131
Medtr7g117060.1 | CMP-sialic acid transporter, putative | HC | c...   108   4e-24
Medtr7g117060.2 | CMP-sialic acid transporter, putative | HC | c...   108   4e-24
Medtr5g099280.1 | CMP-sialic acid transporter, putative | HC | c...    94   1e-19
Medtr5g099280.2 | CMP-sialic acid transporter, putative | HC | c...    52   5e-07
Medtr5g099280.3 | CMP-sialic acid transporter, putative | HC | c...    49   6e-06

>Medtr1g116565.1 | UDP-galactose transporter | HC |
           chr1:52733664-52738858 | 20130731
          Length = 408

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/266 (84%), Positives = 241/266 (90%), Gaps = 1/266 (0%)

Query: 1   MQLYFSPATVKMLSNXXXXXXXXXXXXXMKRRFSIIQWEALALLLIGISVNQLRSLPEGS 60
           MQLYF+PATVKMLSN             MKRRFSIIQWEALALLLIGISVNQLRSLPEG+
Sbjct: 144 MQLYFNPATVKMLSNLKVLVIALLLKVVMKRRFSIIQWEALALLLIGISVNQLRSLPEGT 203

Query: 61  TALGLPVTMGAYLYTLVFVTVPSLASVYNEYALKSQYDTSIYLQNLFLYGYGAIFNFLGI 120
           TALGLPVTMGAY+YT +FVTVPS+ASVYNEYALKSQYDTSIYLQNLFLYGYGA+FNFLGI
Sbjct: 204 TALGLPVTMGAYVYTFIFVTVPSMASVYNEYALKSQYDTSIYLQNLFLYGYGAMFNFLGI 263

Query: 121 LGTVVIKGPSSLDIREGHSRATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG 180
           + T + KGPSS DI EGHS+ATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG
Sbjct: 264 VVTAIFKGPSSFDILEGHSKATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG 323

Query: 181 IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSKAKEEEQNGVVELHDVHDKQRSKESF 240
           IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSK + +EQNG +ELHDV +KQRSK+SF
Sbjct: 324 IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSKVR-DEQNGALELHDVQEKQRSKDSF 382

Query: 241 INMAAGANEEATHRTGHDERHPLLPT 266
           +NMAAGANEEA+HR GHDER PLLPT
Sbjct: 383 LNMAAGANEEASHRVGHDERQPLLPT 408


>Medtr1g116565.2 | UDP-galactose transporter | HC |
           chr1:52733772-52738432 | 20130731
          Length = 408

 Score =  466 bits (1198), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/266 (84%), Positives = 241/266 (90%), Gaps = 1/266 (0%)

Query: 1   MQLYFSPATVKMLSNXXXXXXXXXXXXXMKRRFSIIQWEALALLLIGISVNQLRSLPEGS 60
           MQLYF+PATVKMLSN             MKRRFSIIQWEALALLLIGISVNQLRSLPEG+
Sbjct: 144 MQLYFNPATVKMLSNLKVLVIALLLKVVMKRRFSIIQWEALALLLIGISVNQLRSLPEGT 203

Query: 61  TALGLPVTMGAYLYTLVFVTVPSLASVYNEYALKSQYDTSIYLQNLFLYGYGAIFNFLGI 120
           TALGLPVTMGAY+YT +FVTVPS+ASVYNEYALKSQYDTSIYLQNLFLYGYGA+FNFLGI
Sbjct: 204 TALGLPVTMGAYVYTFIFVTVPSMASVYNEYALKSQYDTSIYLQNLFLYGYGAMFNFLGI 263

Query: 121 LGTVVIKGPSSLDIREGHSRATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG 180
           + T + KGPSS DI EGHS+ATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG
Sbjct: 264 VVTAIFKGPSSFDILEGHSKATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTG 323

Query: 181 IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSKAKEEEQNGVVELHDVHDKQRSKESF 240
           IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSK + +EQNG +ELHDV +KQRSK+SF
Sbjct: 324 IASAVLFGHKLTMNFLIGISIVFISMHQFFSPLSKVR-DEQNGALELHDVQEKQRSKDSF 382

Query: 241 INMAAGANEEATHRTGHDERHPLLPT 266
           +NMAAGANEEA+HR GHDER PLLPT
Sbjct: 383 LNMAAGANEEASHRVGHDERQPLLPT 408


>Medtr7g117060.1 | CMP-sialic acid transporter, putative | HC |
           chr7:48338625-48333229 | 20130731
          Length = 336

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)

Query: 29  MKRRFSIIQWEALALLLIGISVNQLRSLPEGSTALGLPVTMGAYLYTLVFVTVPSLASVY 88
           + RR S +QW A+ LL +G + +Q++   E S        +  Y+  ++   + +LA +Y
Sbjct: 120 LGRRLSNLQWMAIVLLAVGTTTSQVKGCGEASCDSIFSAPIPGYMLGVLSACLSALAGIY 179

Query: 89  NEYALKSQYDTSIYLQNLFLYGYGAIFNFLGILGTVVI--------KGPSSLDIREGHSR 140
            E+ +K   D S+Y QN+ LY +G+IFN    L  +++         GP    I  G++ 
Sbjct: 180 TEFLMKKNND-SLYWQNIQLYTFGSIFN----LAKLIVDDFRGGFENGPWWHRIFNGYTV 234

Query: 141 ATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHKLTMNFLIGIS 200
            T L++ N  + G+L S+  K+AD I+K YS+++A + T   S  LF  K T+   +GI 
Sbjct: 235 TTWLVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMTLSTFLFDFKPTLQLFLGIV 294

Query: 201 IVFISMHQFFSPLS-------KAKEEEQNGVVELHDVHDKQRS 236
           I  +S+H +F+P +         K +E+  ++E+  V  + RS
Sbjct: 295 ICMMSLHMYFAPPNMLLDMPLTVKSDEEEKLIEV-SVDRRTRS 336


>Medtr7g117060.2 | CMP-sialic acid transporter, putative | HC |
           chr7:48338625-48333229 | 20130731
          Length = 336

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)

Query: 29  MKRRFSIIQWEALALLLIGISVNQLRSLPEGSTALGLPVTMGAYLYTLVFVTVPSLASVY 88
           + RR S +QW A+ LL +G + +Q++   E S        +  Y+  ++   + +LA +Y
Sbjct: 120 LGRRLSNLQWMAIVLLAVGTTTSQVKGCGEASCDSIFSAPIPGYMLGVLSACLSALAGIY 179

Query: 89  NEYALKSQYDTSIYLQNLFLYGYGAIFNFLGILGTVVI--------KGPSSLDIREGHSR 140
            E+ +K   D S+Y QN+ LY +G+IFN    L  +++         GP    I  G++ 
Sbjct: 180 TEFLMKKNND-SLYWQNIQLYTFGSIFN----LAKLIVDDFRGGFENGPWWHRIFNGYTV 234

Query: 141 ATMLLIANNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHKLTMNFLIGIS 200
            T L++ N  + G+L S+  K+AD I+K YS+++A + T   S  LF  K T+   +GI 
Sbjct: 235 TTWLVVLNLGSTGLLVSWLMKHADNIVKVYSTSMAMLLTMTLSTFLFDFKPTLQLFLGIV 294

Query: 201 IVFISMHQFFSPLS-------KAKEEEQNGVVELHDVHDKQRS 236
           I  +S+H +F+P +         K +E+  ++E+  V  + RS
Sbjct: 295 ICMMSLHMYFAPPNMLLDMPLTVKSDEEEKLIEV-SVDRRTRS 336


>Medtr5g099280.1 | CMP-sialic acid transporter, putative | HC |
           chr5:43526472-43532288 | 20130731
          Length = 355

 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 13/183 (7%)

Query: 29  MKRRFSIIQWEALALLLIGISVNQLRSLPEGSTALGLPVTMGAYLYTLVFVTVPSLASVY 88
           +K++ S IQW A  LL  G +  QL S       L  PV    ++  +V   +   A VY
Sbjct: 173 LKKKLSEIQWAAFVLLTAGCTTAQLNS--NSDHVLQTPVQ--GWVMAIVMALLSGFAGVY 228

Query: 89  NEYALKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVVIKGPSSLDIREGHSRATML 144
            E  +K +   +I +QN +LY +G  FN + IL      VV KG        G+S  T L
Sbjct: 229 TEAIIKKRPSQNINVQNFWLYVFGMGFNAVAILVQDFDAVVNKG-----FFHGYSFITFL 283

Query: 145 LIANNAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAVLFGHKLTMNFLIGISIVFI 204
           +I N+A  GI  S   KYAD I+K YS++VA + T + S  LFG  L++ F +G  +V +
Sbjct: 284 MIFNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGTIVVSV 343

Query: 205 SMH 207
           S++
Sbjct: 344 SIY 346


>Medtr5g099280.2 | CMP-sialic acid transporter, putative | HC |
           chr5:43526472-43532288 | 20130731
          Length = 291

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 29  MKRRFSIIQWEALALLLIGISVNQLRSLPEGSTALGLPVTMGAYLYTLVFVTVPSLASVY 88
           +K++ S IQW A  LL  G +  QL S       L  PV    ++  +V   +   A VY
Sbjct: 173 LKKKLSEIQWAAFVLLTAGCTTAQLNS--NSDHVLQTPVQ--GWVMAIVMALLSGFAGVY 228

Query: 89  NEYALKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVVIKGPSSLDIREGHSRATML 144
            E  +K +   +I +QN +LY +G  FN + IL      VV KG        G+S  T L
Sbjct: 229 TEAIIKKRPSQNINVQNFWLYVFGMGFNAVAILVQDFDAVVNKG-----FFHGYSFITFL 283

Query: 145 LIANNA 150
           +I N+A
Sbjct: 284 MIFNHA 289


>Medtr5g099280.3 | CMP-sialic acid transporter, putative | HC |
           chr5:43526472-43532288 | 20130731
          Length = 271

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 29  MKRRFSIIQWEALALLLIGISVNQLRSLPEGSTALGLPVTMGAYLYTLVFVTVPSLASVY 88
           +K++ S IQW A  LL  G +  QL S       L  PV    ++  +V   +   A VY
Sbjct: 173 LKKKLSEIQWAAFVLLTAGCTTAQLNS--NSDHVLQTPVQ--GWVMAIVMALLSGFAGVY 228

Query: 89  NEYALKSQYDTSIYLQNLFLYGYGAIFNFLGIL 121
            E  +K +   +I +QN +LY +G  FN + IL
Sbjct: 229 TEAIIKKRPSQNINVQNFWLYVFGMGFNAVAIL 261