Miyakogusa Predicted Gene

Lj4g3v1345670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1345670.1 Non Characterized Hit- tr|F6HYQ6|F6HYQ6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,66.67,0.0000000000003,seg,NULL; FAMILY NOT
NAMED,NULL,NODE_11325_length_351_cov_378.435883.path2.1
         (55 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g116590.3 | DUF1685 family protein | HC | chr1:52747901-52...    71   2e-13
Medtr1g116590.2 | DUF1685 family protein | HC | chr1:52747901-52...    71   2e-13
Medtr1g116590.1 | DUF1685 family protein | HC | chr1:52747901-52...    71   2e-13
Medtr1g116590.4 | DUF1685 family protein | HC | chr1:52747901-52...    71   2e-13
Medtr7g110880.1 | hypothetical protein | HC | chr7:45467317-4546...    55   2e-08
Medtr1g080750.1 | DUF1685 family protein | HC | chr1:35915728-35...    46   7e-06

>Medtr1g116590.3 | DUF1685 family protein | HC |
           chr1:52747901-52747551 | 20130731
          Length = 116

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 33/33 (100%)

Query: 23  NWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
           +WKISSPGDHPEDVKARLK+WAQAVACTVKLCS
Sbjct: 84  DWKISSPGDHPEDVKARLKYWAQAVACTVKLCS 116


>Medtr1g116590.2 | DUF1685 family protein | HC |
           chr1:52747901-52747551 | 20130731
          Length = 116

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 33/33 (100%)

Query: 23  NWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
           +WKISSPGDHPEDVKARLK+WAQAVACTVKLCS
Sbjct: 84  DWKISSPGDHPEDVKARLKYWAQAVACTVKLCS 116


>Medtr1g116590.1 | DUF1685 family protein | HC |
           chr1:52747901-52747551 | 20130731
          Length = 116

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 33/33 (100%)

Query: 23  NWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
           +WKISSPGDHPEDVKARLK+WAQAVACTVKLCS
Sbjct: 84  DWKISSPGDHPEDVKARLKYWAQAVACTVKLCS 116


>Medtr1g116590.4 | DUF1685 family protein | HC |
           chr1:52747901-52747551 | 20130731
          Length = 116

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/33 (93%), Positives = 33/33 (100%)

Query: 23  NWKISSPGDHPEDVKARLKFWAQAVACTVKLCS 55
           +WKISSPGDHPEDVKARLK+WAQAVACTVKLCS
Sbjct: 84  DWKISSPGDHPEDVKARLKYWAQAVACTVKLCS 116


>Medtr7g110880.1 | hypothetical protein | HC |
           chr7:45467317-45468819 | 20130731
          Length = 289

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/28 (82%), Positives = 24/28 (85%)

Query: 21  IANWKISSPGDHPEDVKARLKFWAQAVA 48
           IANW+IS PGD P DVKARLK WAQAVA
Sbjct: 253 IANWRISGPGDDPRDVKARLKVWAQAVA 280


>Medtr1g080750.1 | DUF1685 family protein | HC |
           chr1:35915728-35916517 | 20130731
          Length = 180

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 24/29 (82%)

Query: 23  NWKISSPGDHPEDVKARLKFWAQAVACTV 51
           +WKI SPGD PE VK +L+ WAQAVAC+V
Sbjct: 144 SWKICSPGDDPELVKTKLRHWAQAVACSV 172