Miyakogusa Predicted Gene

Lj4g3v1335070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1335070.1 tr|I1KQC8|I1KQC8_SOYBN Glutamyl-tRNA(Gln)
amidotransferase subunit B, chloroplastic/mitochondrial
OS,88.77,0,GatB domain,Asn/Gln amidotransferase;
GatB,Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B
subun,CUFF.49088.1
         (546 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g055940.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfera...   909   0.0  

>Medtr5g055940.1 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase
           subunit B | HC | chr5:23052488-23047084 | 20130731
          Length = 542

 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/544 (80%), Positives = 475/544 (87%), Gaps = 2/544 (0%)

Query: 1   MASAIFRTFQVHPFLLCPALFLRRTNGVLRCAXXXXXXXXXXXXXXXXXXKVSTQSKKLD 60
           M+  IFRTFQ+HPFLL P   L+  N                          STQSKKL+
Sbjct: 1   MSYTIFRTFQLHPFLLYPTSILKLQNRFFHSTTIKATQSQQTQTQTKH--STSTQSKKLN 58

Query: 61  KIPKDYEAVIGIETHVQISTLTKAFCGCPYSYGSPPNSSVCPVCMGLPGALPVLNSKVID 120
            +PKDYE +IGIETHVQ+ST TKAFC CPY+YGS PN+S+CPVCMGLPGALPVLNSKVI+
Sbjct: 59  NLPKDYEPIIGIETHVQLSTNTKAFCNCPYNYGSFPNTSICPVCMGLPGALPVLNSKVIE 118

Query: 121 FAVKLGLALNCNLSFNSKFDRKQYFYPDLPKGYQISQFDVPIAAGGYLHVDIPVEFGGGH 180
           FAVKLGLALNC L+F+SKFDRKQYFYPDLPKGYQISQFDVPIA+ G+L VDIP+E+GGGH
Sbjct: 119 FAVKLGLALNCELAFDSKFDRKQYFYPDLPKGYQISQFDVPIASSGFLDVDIPLEYGGGH 178

Query: 181 RKFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAEIQ 240
           ++FGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAE+Q
Sbjct: 179 KRFGITRVHMEEDAGKLLHTENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQ 238

Query: 241 RLVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSAVSRAIDFEIARQ 300
           RLVRYLGVSNGNMQEGSLRCDVNVS+RPIGQSKFGTKVE+KNLNSF+++SRAIDFEIARQ
Sbjct: 239 RLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSKFGTKVEVKNLNSFASMSRAIDFEIARQ 298

Query: 301 VQLHSNGQENQIVQETCLWEEGSQRTITMRIKEGLADYRYFPEPDLPAVIVSQEYVDGIR 360
           VQLHS GQ +QIVQET  WEEGSQRTITMR KEGLADYRYFPEPDLP+VI+ QEYVDGI+
Sbjct: 299 VQLHSQGQADQIVQETRSWEEGSQRTITMRKKEGLADYRYFPEPDLPSVILYQEYVDGIK 358

Query: 361 NSLPELPEEKRRRYEKMGLSMQDVLFLANDQNIAEFFDATLAKGTDAKLVANWIMSDIAA 420
           NSLPELPE KRRRYEKMGL MQDVLFLAND+NIAEFFDATLAKG DAKLVANWIMSDIA 
Sbjct: 359 NSLPELPEGKRRRYEKMGLGMQDVLFLANDKNIAEFFDATLAKGADAKLVANWIMSDIAG 418

Query: 421 FMKNEKLSINEIKLTPEELSELIAXXXXXXXXXXXXXEILFELLAKGGSVKELIEKKDLV 480
           FMKNEKL+IN+IKLTPEEL+ELIA             EILFELLA+GGSVKE+IEKKDLV
Sbjct: 419 FMKNEKLTINDIKLTPEELAELIASIKDGTISGKIGKEILFELLAEGGSVKEIIEKKDLV 478

Query: 481 QIADPAEIEKMVDKVIAENPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNKILLE 540
           QI DP EIEKMVDK IA+NPKQVEQYRGGKTKLQGFFAGQVMK SKGKANPGLLNKILLE
Sbjct: 479 QITDPVEIEKMVDKAIADNPKQVEQYRGGKTKLQGFFAGQVMKASKGKANPGLLNKILLE 538

Query: 541 KLNS 544
           KLNS
Sbjct: 539 KLNS 542