Miyakogusa Predicted Gene

Lj4g3v1329920.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1329920.1 Non Characterized Hit- tr|G7IGQ6|G7IGQ6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,22.22,0.0000007,seg,NULL; DUF4283,Domain of unknown function
DUF4283,CUFF.48947.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    59   6e-09
Medtr3g048390.1 | DUF4283 domain protein | LC | chr3:17919204-17...    58   1e-08
Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family pr...    56   2e-08
Medtr8g045280.1 | DUF4283 domain protein | LC | chr8:17686445-17...    54   1e-07
Medtr5g065250.1 | RNA recognition motif, a.k.a. RRM, RBD protein...    52   3e-07
Medtr4g061490.1 | DUF4283 domain protein | LC | chr4:22746210-22...    52   4e-07
Medtr5g053650.1 | DUF4283 domain protein | LC | chr5:22104331-22...    52   4e-07
Medtr6g048830.1 | DUF4283 domain protein | LC | chr6:17708420-17...    51   8e-07
Medtr1g033680.1 | DUF4283 domain protein | LC | chr1:12165843-12...    51   1e-06
Medtr1148s0010.1 | DUF4283 domain protein | LC | scaffold1148:29...    48   6e-06

>Medtr2g060030.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr2:24731568-24734132 | 20130731
          Length = 768

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 63/143 (44%)

Query: 6   CAQARTLTIKPVEFLQEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQ 65
           C  A  L  + +  LQ      G  N  +IP+G ++VLL+ E++ ++   +S+ A F   
Sbjct: 339 CMIATVLDGEAIPVLQRRIYDAGFENLDIIPMGADKVLLKTEDESDVNVILSEAASFFAS 398

Query: 66  LLTDVKPCSMFTFGTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRHRAD 125
             T++              W+R++ + +  WN  FF       G  +  D  T  + R D
Sbjct: 399 FFTNIVKWKKEVVFREKGAWVRIYGVPLQAWNLEFFKLCVYDCGRLLKVDDYTVDKLRFD 458

Query: 126 FARILVRMNHLILHCFTMSVDVG 148
           +AR+L+  + L L       D+G
Sbjct: 459 YARVLISTSFLDLVITDAKEDMG 481


>Medtr3g048390.1 | DUF4283 domain protein | LC |
           chr3:17919204-17917831 | 20130731
          Length = 457

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 4/131 (3%)

Query: 5   WCAQARTLTIKPVEFL---QEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISKCAF 61
           W ++    T+   +F+   Q++   +G  N R++P G + V+L    KE+M S     A 
Sbjct: 184 WASKGALATVLNGDFIPIVQQKIIDVGFENVRVVPRGGDNVILFCSGKEDMMSVYLAAAD 243

Query: 62  FLEQLLTDVKPCSMFTFGT-SHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTAL 120
           F     TD++  S+         VW+R++ + + +W+  F   I +  G  +  D  T  
Sbjct: 244 FFNCFFTDMRAWSLTEDNVPERGVWLRIYGVPLHVWHIKFLEFISSSCGRMLKIDPCTTN 303

Query: 121 RHRADFARILV 131
             R DFARILV
Sbjct: 304 LERLDFARILV 314


>Medtr7g083690.1 | endonuclease/exonuclease/phosphatase family
           protein | LC | chr7:32221247-32217435 | 20130731
          Length = 1124

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 4/152 (2%)

Query: 20  LQEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQLLTDVKPCSMFTFG 79
           LQ+     G  N  + P+G++ V L     E++ +  +    F   L +D+   S     
Sbjct: 199 LQQRVEDAGFSNVVVTPMGSDRVFLYCTGGEDIWTVFNDVVHFFGMLFSDLHRWSSEDII 258

Query: 80  TSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTAL-RHRADFARILVRMNHLIL 138
                WI ++ I +  WNE F+    +  G ++ SD  TA+ R R DFAR+L+    L +
Sbjct: 259 YERGDWIIIYGIPVHAWNEDFYKICVSGSGRFIRSDDCTAVDRARLDFARVLISTTFLEV 318

Query: 139 HCFTMSVDVGGTPCIILVEKDVEAHDYGVVED 170
             +T  V + G   ++   K VE  D  + ED
Sbjct: 319 VNYTFEVVIDGCNYLL---KLVEEWDCNLGED 347


>Medtr8g045280.1 | DUF4283 domain protein | LC |
           chr8:17686445-17683874 | 20130731
          Length = 804

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 58/128 (45%)

Query: 9   ARTLTIKPVEFLQEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQLLT 68
           A  L  + +  +Q      G  +  +IPLG + V +   +  E+ + I+    F + +  
Sbjct: 383 ASVLNGEAIPVVQTRIEDAGFKDLDVIPLGADRVFMRSASDVEVSTIIAGARDFFDHIFL 442

Query: 69  DVKPCSMFTFGTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRHRADFAR 128
           ++      +       W+RL+ I +  WNE FF     + G ++ SD  +  + R D+AR
Sbjct: 443 NIVRWEKQSVPFQRGAWLRLYGIPLHAWNENFFKLCVFECGRFLRSDGCSMEKERFDYAR 502

Query: 129 ILVRMNHL 136
           IL+  + L
Sbjct: 503 ILIATSSL 510


>Medtr5g065250.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
           LC | chr5:27420597-27418392 | 20130731
          Length = 654

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 11/175 (6%)

Query: 1   MDEKWCAQ-ARTLTIKPVEFLQEEFSQIGLFNFRLIPLGTNEVLL-EFENKEEMESTISK 58
           ++E W A   R L     + LQ      G  + +++PLG   VLL E  N    E+  +K
Sbjct: 183 LEELWNAMVGRLLFHLEADALQTCLFMEGWSDIKVVPLGEKLVLLKEDRNGVIAEARAAK 242

Query: 59  ----CAFFLEQLLTDVKPCSMFTFGTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLS 114
               CA F+E     V P S     TS   W+++  I + +W E FF  + +  G+++  
Sbjct: 243 KNWWCATFIE-----VVPWSPNIVATSRRTWVQIRGIPLHIWKEDFFKKVRSFFGTFIDF 297

Query: 115 DTPTALRHRADFARILVRMNHLILHCFTMSVDVGGTPCIILVEKDVEAHDYGVVE 169
           D  T  R+R D A +L+    +      M V V G    I V + V     G VE
Sbjct: 298 DEETTTRNRMDVANLLISTKRMGRIDEEMKVKVMGAVFSIWVVEGVPMFKEGEVE 352


>Medtr4g061490.1 | DUF4283 domain protein | LC |
           chr4:22746210-22743819 | 20130731
          Length = 639

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%)

Query: 28  GLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQLLTDVKPCSMFTFGTSHFVWIR 87
           G+ N  + P+G++ V L      ++ +  ++   F   + +D+    +         WIR
Sbjct: 306 GINNVVVAPMGSDRVFLYCMGDVDIWNVFNEAVDFFSMMFSDIHKWVLDDEKYERGAWIR 365

Query: 88  LWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRHRADFARILV 131
           ++      WNE FF    +  G Y+ SD  T  R R D+AR+L+
Sbjct: 366 IYGTPAHAWNESFFKICASGCGRYIRSDDCTVDRARLDYARVLI 409


>Medtr5g053650.1 | DUF4283 domain protein | LC |
           chr5:22104331-22105538 | 20130731
          Length = 385

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 1/119 (0%)

Query: 19  FLQEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQLLTDVKPCSMFTF 78
            +Q+ F  +G  +F+LI LG + V+L    + +        A F+   L D +P  + + 
Sbjct: 26  IVQQAFVDVGFVDFKLISLGEDNVVLHPGVEGDAMELFKAAADFIGNFLDDCRPWMLDSI 85

Query: 79  -GTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRHRADFARILVRMNHL 136
                  W+R + + + +WN++FF  +    G  +  D  T  + R D+A +L+    L
Sbjct: 86  VNYERGAWVRCYGVPLHVWNDIFFLELAATQGRLLKIDDCTTNKDRLDYACLLISTPSL 144


>Medtr6g048830.1 | DUF4283 domain protein | LC |
           chr6:17708420-17709673 | 20130731
          Length = 286

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 8/148 (5%)

Query: 7   AQARTLTIKPVEFLQEEFSQIGLFNFRLIPLGTNEVLLE-FENKEEMESTISKCAFF--- 62
           A+ + L  + +  ++   +  G  +  +IPLG ++V +  F N + M+   +   FF   
Sbjct: 50  ARFKMLYGEAIPVIRTRITDAGFDDLDIIPLGADKVYIRCFSNTDVMQVIDTARDFFNLF 109

Query: 63  LEQLLTDVKPCSMFTFGTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRH 122
              ++   K    F  G    VW+R++ ILI  WN  FF       G ++  D  T  + 
Sbjct: 110 FSHIVRWNKDIVKFERG----VWVRIYGILIHAWNSSFFKLAVLDCGRFLRLDNCTVAKD 165

Query: 123 RADFARILVRMNHLILHCFTMSVDVGGT 150
           R D ARIL+ M+ L +   T  + + G 
Sbjct: 166 RFDHARILLAMSSLEVINVTEKIVIDGV 193


>Medtr1g033680.1 | DUF4283 domain protein | LC |
           chr1:12165843-12167828 | 20130731
          Length = 576

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 54/122 (44%)

Query: 28  GLFNFRLIPLGTNEVLLEFENKEEMESTISKCAFFLEQLLTDVKPCSMFTFGTSHFVWIR 87
           GL    +IP+G N VLL+ E+   +E    +   +   L   VK  +         +WIR
Sbjct: 140 GLNKIGVIPMGANMVLLKAEDPHLIEEAEGRSDPWWRGLFKSVKRWAPNLVSKQRLIWIR 199

Query: 88  LWQILIGLWNEVFFAAIGNKLGSYVLSDTPTALRHRADFARILVRMNHLILHCFTMSVDV 147
            + + + +W+E  F  +G   G +V  D  T   +R D  RI V  + +      + V+V
Sbjct: 200 CFGLPLHVWDEKTFKKMGALFGEFVDFDEETIGLNRVDMGRIYVLSSSMAFVNEKLRVEV 259

Query: 148 GG 149
            G
Sbjct: 260 MG 261


>Medtr1148s0010.1 | DUF4283 domain protein | LC |
           scaffold1148:292-2316 | 20130731
          Length = 604

 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 2   DEKWC---AQARTLTIKPVEFLQEEFSQIGLFNFRLIPLGTNEVLLEFENKEEMESTISK 58
           D +W    A A  +  + +  +Q      G  +  +IPL  + V L  ++ +E  + + +
Sbjct: 142 DLQWAWSGALANVVNGEAITVVQNRVEDAGFADLDIIPLVADRVFLRSKSDKETFTMLGE 201

Query: 59  CAFFLEQLLTDVKPCSMFTFGTSHFVWIRLWQILIGLWNEVFFAAIGNKLGSYVLSDTPT 118
             +F +    ++         +    W+RL+ I +  WNE  F     + GS++ +D  +
Sbjct: 202 AKYFFDHFFKNIVRWEKAVVPSRRGAWLRLYGIPLHAWNENLFKLCVMECGSFLHTDDMS 261

Query: 119 ALRHRADFARILV 131
             + R D+A +L+
Sbjct: 262 LDKGRFDYASVLI 274