Miyakogusa Predicted Gene

Lj4g3v1327600.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1327600.1 tr|C1MZM1|C1MZM1_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_4810,39.47,3e-19,Staygreen,Staygreen protein; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.48843.1
         (189 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011120.1 | senescence-inducible stay-green protein | HC |...   305   2e-83
Medtr3g088795.1 | staygreen protein | HC | chr3:40615462-4061876...   157   8e-39

>Medtr5g011120.1 | senescence-inducible stay-green protein | HC |
           chr5:3162017-3164385 | 20130731
          Length = 263

 Score =  305 bits (781), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 143/174 (82%), Positives = 160/174 (91%), Gaps = 1/174 (0%)

Query: 16  QQFSLSPHRTRRIRKKNQAVFPVARLFGPAMFEASKLKVLFLGVDENKHPGDLPRTYTLT 75
           Q   L P+R RR+ KKNQ++ PVARLFGPA+FEASKLKVLFLG+DE+KHPG+LPRTYTLT
Sbjct: 23  QHKPLFPNR-RRLWKKNQSIVPVARLFGPAIFEASKLKVLFLGIDEDKHPGNLPRTYTLT 81

Query: 76  HSDITSKITLAISHNINNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLD 135
           HSD+TSK+TLAIS  INNSQLQGWYNRLQRDEVVAQW+K+KG MSLHVHCHISGGHFLLD
Sbjct: 82  HSDVTSKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGKMSLHVHCHISGGHFLLD 141

Query: 136 LCAKLRYFIFCKELPVVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           + A+LRYFIFCKELPVVLKAF+HGD NLFNNYPEL+E+LVWVYFHS I EFNKV
Sbjct: 142 IFARLRYFIFCKELPVVLKAFVHGDGNLFNNYPELQEALVWVYFHSKIPEFNKV 195


>Medtr3g088795.1 | staygreen protein | HC | chr3:40615462-40618761 |
           20130731
          Length = 269

 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 111/159 (69%), Gaps = 5/159 (3%)

Query: 32  NQAVFPVARLFGP-AMFEASKLKVLFLGVDENKHPGDLPRTYTLTHSDITSKITLAISHN 90
           N  V+   RL GP A FEA+KLKV+ L    N++   +PRTY L+H D+T+ +TLA+S+ 
Sbjct: 50  NSLVYETVRLLGPPAKFEATKLKVVLLEDQINRYASIIPRTYILSHCDLTANLTLAVSNV 109

Query: 91  INNSQLQGWYNRLQRDEVVAQWRKIKGNMSLHVHCHISGGHFLLDLCAKLRYFIFCKELP 150
           I   QL+GWY   ++D+VVA+W+K+K  M LHVHC +SG  F LDL A+ RY IF KE+ 
Sbjct: 110 IKLEQLRGWY---EKDDVVAEWKKVKNEMCLHVHCFVSGPTF-LDLAAEFRYHIFSKEMT 165

Query: 151 VVLKAFIHGDENLFNNYPELEESLVWVYFHSNISEFNKV 189
           +VLKA  +GD  LF  +PEL +S+V VYFHS+  ++N++
Sbjct: 166 LVLKAIQYGDSVLFQEHPELLDSIVRVYFHSSSKKYNRM 204