Miyakogusa Predicted Gene

Lj4g3v1327580.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1327580.3 tr|C1N0B3|C1N0B3_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_4819,29.54,4e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.48846.3
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102440.1 | PGR5-like protein 1A | HC | chr4:42460563-4246...   446   e-125
Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-31865...   434   e-122
Medtr2g097230.1 | PGR5-like protein 1A, putative | HC | chr2:415...    62   8e-10

>Medtr4g102440.1 | PGR5-like protein 1A | HC |
           chr4:42460563-42464677 | 20130731
          Length = 319

 Score =  446 bits (1147), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/268 (82%), Positives = 240/268 (89%), Gaps = 2/268 (0%)

Query: 58  SPKATADQQGKVEEFEEGAV-DSKILPYCSID-KKDKKSVGEMEQDFLQALQSFYYEGKA 115
           SPKATADQQG V +F+  AV D+ +LPYCSID KK+KKSVGE+EQ+FLQALQSFYYEGKA
Sbjct: 52  SPKATADQQGNVGDFDGDAVIDTNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKA 111

Query: 116 IMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDKEYDDLKMRLKMN 175
           IMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSG PIL+DKEYD LK+ LK  
Sbjct: 112 IMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILTDKEYDKLKLNLKRE 171

Query: 176 GSEIVVEGPRCSLRSRKVYSDLSVDYLKMFLLNVPATVIAXXXXXXXXXXXXXEITYLLE 235
           GSEIVVEGPRCSLRS+KVYSDLSVDYL+MFLLNVPATV+A             EITYLLE
Sbjct: 172 GSEIVVEGPRCSLRSKKVYSDLSVDYLRMFLLNVPATVVALGLFFFLDDLTGFEITYLLE 231

Query: 236 LPEPFSFIFTWFAAVPLIVWLALTITNVIIKDFLILKGPCPNCGTENTSFFGTILSIASG 295
           LPEPFSFIFTWFAAVPLIV+LAL++T  IIKDF+ILKGPCPNCGTENTSFFGTILSI+SG
Sbjct: 232 LPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKGPCPNCGTENTSFFGTILSISSG 291

Query: 296 GSSNKVKCSNCGTEMVYDSATRLITLPE 323
           GS+NKVKCS+CGTEMVYDS TRLITLPE
Sbjct: 292 GSNNKVKCSDCGTEMVYDSGTRLITLPE 319


>Medtr5g011220.1 | PGR5-like protein 1A | HC | chr5:3189399-3186523
           | 20130731
          Length = 315

 Score =  434 bits (1116), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/290 (74%), Positives = 238/290 (82%), Gaps = 5/290 (1%)

Query: 41  IQFN--GXXXXXXXXXXXXSPKATADQQ-GKVEEFEEGAVDSKILPYCSIDKKDKKSVGE 97
           I FN  G            SPKAT+DQQ GKVEE  +  VDSKIL YCSID+K+KKS+GE
Sbjct: 28  IHFNAGGRHSSLRRGLFLLSPKATSDQQAGKVEE--DAVVDSKILQYCSIDQKEKKSLGE 85

Query: 98  MEQDFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGK 157
           +EQDFLQALQ+FYYEGKA MSNEEFDNLKEELMWEGSSVVMLSS EQKFLEAS+AYVSGK
Sbjct: 86  LEQDFLQALQAFYYEGKATMSNEEFDNLKEELMWEGSSVVMLSSSEQKFLEASIAYVSGK 145

Query: 158 PILSDKEYDDLKMRLKMNGSEIVVEGPRCSLRSRKVYSDLSVDYLKMFLLNVPATVIAXX 217
           P++SDKE+D+LK++LKM GSEIV EGPRCSLRSRKVYSDL+VDYLK  LL VPATVIA  
Sbjct: 146 PLMSDKEFDELKLKLKMEGSEIVAEGPRCSLRSRKVYSDLTVDYLKALLLKVPATVIALG 205

Query: 218 XXXXXXXXXXXEITYLLELPEPFSFIFTWFAAVPLIVWLALTITNVIIKDFLILKGPCPN 277
                      EI YL+ +PEPFSFI TWFAAVP I+W A +ITN IIKDFLILKGPCPN
Sbjct: 206 LFFFLDDVTGFEINYLIAIPEPFSFILTWFAAVPFILWFAQSITNAIIKDFLILKGPCPN 265

Query: 278 CGTENTSFFGTILSIASGGSSNKVKCSNCGTEMVYDSATRLITLPEGSNA 327
           CGTENTSFFGTILSI+SG S+NKVKC NCGT M+YDS TRLITLPEGSNA
Sbjct: 266 CGTENTSFFGTILSISSGDSTNKVKCENCGTAMLYDSTTRLITLPEGSNA 315


>Medtr2g097230.1 | PGR5-like protein 1A, putative | HC |
           chr2:41516368-41519630 | 20130731
          Length = 286

 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 24/185 (12%)

Query: 143 EQKFLEASMAYVSGKPILSDKEYDDLKMRLKMNGSEIVVEGPRCSLRSRKVYSDLSVDYL 202
           E  + +A  AY  G+P++ D  +D ++++LK  GS+ VV+ PRCS+R +  Y+D   D  
Sbjct: 67  EALYSQARDAYYRGEPLIVDDMFDRVELKLKWYGSKSVVKYPRCSIRRQSTYADAEEDLS 126

Query: 203 KMFLLNVPATVIAXXXXXXXXXXXXXEITYLL---------------ELPEPFSFIFTWF 247
            +F L    T+                I+                  EL   F      F
Sbjct: 127 MVFALASAWTLFFAFGSSAMVGPMFYSISLAYQNAFNLGLSYGSQASELSPLFMVNTILF 186

Query: 248 AAVPLIVWLAL------TITNVIIKDFLILKGPCPNCGTENTSFFGTILSIASGGSSNKV 301
            A+  ++   +      T+  +   D   LKG CPNCG E    F  + +  +  S ++ 
Sbjct: 187 TALGFVIGYPVASASVKTLQGLWRNDLAALKGSCPNCGEE---VFAFVRTDKANNSPHRA 243

Query: 302 KCSNC 306
           KC  C
Sbjct: 244 KCHVC 248