Miyakogusa Predicted Gene

Lj4g3v1316340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1316340.1 Non Characterized Hit- tr|B9FLZ8|B9FLZ8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,39.53,2e-19,
,CUFF.48822.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102330.1 | copper ion-binding protein, putative | HC | ch...   215   2e-56

>Medtr4g102330.1 | copper ion-binding protein, putative | HC |
           chr4:42404651-42399876 | 20130731
          Length = 168

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/163 (71%), Positives = 135/163 (82%)

Query: 1   MGEFTIQISNELVNQLVDDPVPKKKIRRNRRKVAKETEKPQSKVTGKPENAAAPGWPVQS 60
           MGEFTIQISN+LVN+LVDDPV KKK RR +RKVA+E EKPQ  V  + E A AP WPVQ 
Sbjct: 1   MGEFTIQISNDLVNKLVDDPVVKKKPRRVKRKVAREIEKPQPNVAEEAEIAPAPVWPVQP 60

Query: 61  PLFLPAKPPVQPADPEIDGIRSVLRESEKVLESLQKQEENMLQEVTQKAKDLHDKEYKLP 120
            L++PA  P  P+  E++GIRSVL+ESEKVLE LQKQE+ MLQEVTQKAKDLH+KEYK+P
Sbjct: 61  ALYVPATLPAHPSQSELEGIRSVLQESEKVLERLQKQEKQMLQEVTQKAKDLHEKEYKVP 120

Query: 121 NPKPEPCIAERLATLSCYKEHIKDPLKCSAFVTNFAGCLRKFG 163
           +PKPE C AERLA+L+CYKEHIKDPLKC+ FV NFA CLR+ G
Sbjct: 121 DPKPERCTAERLASLTCYKEHIKDPLKCAGFVNNFADCLRRLG 163