Miyakogusa Predicted Gene

Lj4g3v1303750.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1303750.2 CUFF.48798.2
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023760.1 | DHHC-type zinc finger protein | HC | chr4:8071...   135   1e-32
Medtr7g118050.1 | DHHC-type zinc finger protein | HC | chr7:4899...    84   2e-17

>Medtr4g023760.1 | DHHC-type zinc finger protein | HC |
           chr4:8071704-8076634 | 20130731
          Length = 299

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 79/109 (72%)

Query: 16  QFYTFLETALVTLSLLPYFMAFFTDEDISEPVTTLAVSFIAFVLNLAFVLSILGFMIMHI 75
            F   L T+LVT SLLP+F+AFF+D +I    ++LA +F+AFVLNLAF LS++GF+IMHI
Sbjct: 168 NFILSLSTSLVTASLLPHFIAFFSDGEIPGTPSSLATTFLAFVLNLAFALSVMGFLIMHI 227

Query: 76  SFVAANXXXXXXXXXXXXLKWHYDLGWRKNYEQVFGTDKRYWFIPAYSE 124
           S VAAN             KW YDLG RKN+EQVFG DK+YWFIPAYSE
Sbjct: 228 SLVAANTTTIEAYEKKTTPKWRYDLGRRKNFEQVFGMDKKYWFIPAYSE 276


>Medtr7g118050.1 | DHHC-type zinc finger protein | HC |
           chr7:48991960-48996771 | 20130731
          Length = 307

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 7/108 (6%)

Query: 22  ETALVTLSLLPYFMAFF-----TDEDISEPVTTLAVSFIAFVLNLAFVLSILGFMIMHIS 76
           ET LV L+L+P F+ FF      +  +S      +  F+A +LNLAF LS+L F++MH+S
Sbjct: 180 ETTLVCLALIPSFLRFFGVGGAKNHKLSP--GGFSAIFLASILNLAFALSLLCFIVMHLS 237

Query: 77  FVAANXXXXXXXXXXXXLKWHYDLGWRKNYEQVFGTDKRYWFIPAYSE 124
            + +N            ++W YD+G +KN+EQVFGT K  W  P +SE
Sbjct: 238 LLLSNTTSVEVHEKKKGVRWRYDVGRKKNFEQVFGTKKALWLFPLFSE 285