Miyakogusa Predicted Gene

Lj4g3v1290620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v1290620.1 Non Characterized Hit- tr|E1ZAJ7|E1ZAJ7_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.02,9e-19,Cornichon,Cornichon;
CORNICHON-RELATED,NULL,CUFF.48775.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102010.1 | cornichon family protein | HC | chr4:42217413-...   227   3e-60
Medtr5g011690.1 | cornichon family protein | HC | chr5:3406410-3...   202   6e-53
Medtr5g011690.2 | cornichon family protein | HC | chr5:3406410-3...   202   6e-53
Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC | chr7:...   107   4e-24
Medtr0311s0030.1 | cornichon family protein | HC | scaffold0311:...   102   7e-23
Medtr7g074930.1 | cornichon family protein | HC | chr7:28070017-...    81   2e-16
Medtr0311s0030.2 | cornichon family protein | HC | scaffold0311:...    72   1e-13

>Medtr4g102010.1 | cornichon family protein | HC |
           chr4:42217413-42214878 | 20130731
          Length = 137

 Score =  227 bits (578), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 111/134 (82%), Positives = 120/134 (89%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           MADIFAWLFSFF LI LIV+ +YQLMCLADLEFDYINPYDSASRINK+VLPEYITV  L 
Sbjct: 1   MADIFAWLFSFFTLIALIVIIIYQLMCLADLEFDYINPYDSASRINKMVLPEYITVAALC 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            FY+VTGHW+M+L C PYLYYN RLY QGKHLVDVTEIFN+L  EKKQRL KLFY+IF+L
Sbjct: 61  GFYLVTGHWVMALLCAPYLYYNYRLYSQGKHLVDVTEIFNMLAREKKQRLIKLFYLIFIL 120

Query: 121 FLSLFWLIYTSLDD 134
           FLSLFWLIYTSLDD
Sbjct: 121 FLSLFWLIYTSLDD 134


>Medtr5g011690.1 | cornichon family protein | HC |
           chr5:3406410-3404005 | 20130731
          Length = 137

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 113/137 (82%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           M D+F WL SFF+LI L+VL  YQLMCLA+LEFDY+NPYD + RIN V+LPE+ T  +L 
Sbjct: 1   MVDLFGWLISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILT 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            FY++TGHWIMS FCLPYLY+N RLYRQ KHL+DVTEIFN+L WEKKQRL KLFY++  L
Sbjct: 61  VFYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTL 120

Query: 121 FLSLFWLIYTSLDDQDN 137
           F S+FW+IYT+L+D + 
Sbjct: 121 FFSVFWMIYTTLEDHNE 137


>Medtr5g011690.2 | cornichon family protein | HC |
           chr5:3406410-3404005 | 20130731
          Length = 137

 Score =  202 bits (515), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 113/137 (82%)

Query: 1   MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
           M D+F WL SFF+LI L+VL  YQLMCLA+LEFDY+NPYD + RIN V+LPE+ T  +L 
Sbjct: 1   MVDLFGWLISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILT 60

Query: 61  CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFML 120
            FY++TGHWIMS FCLPYLY+N RLYRQ KHL+DVTEIFN+L WEKKQRL KLFY++  L
Sbjct: 61  VFYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTL 120

Query: 121 FLSLFWLIYTSLDDQDN 137
           F S+FW+IYT+L+D + 
Sbjct: 121 FFSVFWMIYTTLEDHNE 137


>Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC |
           chr7:36697165-36690743 | 20130731
          Length = 142

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/139 (42%), Positives = 89/139 (64%), Gaps = 6/139 (4%)

Query: 3   DIFAWLFSFFVL-IGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLC 61
           D+  WL   F L I  +    YQ++ L+DLE DYINPYD++S+IN  V+PE+I  G+L  
Sbjct: 4   DLIFWLLICFPLNIAFLASAFYQVLMLSDLEADYINPYDASSKINYFVVPEFIGQGLLCA 63

Query: 62  FYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFMLF 121
            ++ TGHW+M L  LP   Y+V LY + +HL+DVTE+F +L  EKK R+ KL + + ++ 
Sbjct: 64  LFLFTGHWVMFLLMLPLASYHVMLYVKRQHLLDVTEVFRVLNAEKKFRIVKLTFYLTLVM 123

Query: 122 LSLFWLI-----YTSLDDQ 135
           +++F L+     Y  +DD 
Sbjct: 124 ITIFRLVLIVVNYFDMDDD 142


>Medtr0311s0030.1 | cornichon family protein | HC |
           scaffold0311:9983-15900 | 20130731
          Length = 127

 Score =  102 bits (255), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 82/124 (66%), Gaps = 1/124 (0%)

Query: 3   DIFAWL-FSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLC 61
           ++F WL   F   I L+  N YQ++ L+DLE DYINP++++SRIN  +LPE+I  GVL  
Sbjct: 4   NLFFWLVICFPTNIALLASNFYQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCA 63

Query: 62  FYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDVTEIFNLLPWEKKQRLFKLFYVIFMLF 121
             ++TGHW+M L  +P   Y+  LY + +HL+DVTE+F +L  EKK R+ KL   + +L 
Sbjct: 64  LCLLTGHWLMFLLNVPVTCYHAMLYVKREHLIDVTEVFRVLSAEKKFRIAKLVLYLIVLI 123

Query: 122 LSLF 125
           + +F
Sbjct: 124 VVIF 127


>Medtr7g074930.1 | cornichon family protein | HC |
          chr7:28070017-28072366 | 20130731
          Length = 122

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 63/95 (66%)

Query: 1  MADIFAWLFSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLL 60
          MA++  W+ +F +++ L+VL  YQL+ L DLEFDYINPYDS SR+N V+LPE++ + +  
Sbjct: 1  MAEVLYWISTFVLILTLLVLLGYQLILLVDLEFDYINPYDSTSRVNYVILPEFLIMAIFC 60

Query: 61 CFYVVTGHWIMSLFCLPYLYYNVRLYRQGKHLVDV 95
             ++ GHW + L  LP LYYNV +  +  +  + 
Sbjct: 61 FLNLIAGHWFIFLIALPCLYYNVSIIMRPSNTSET 95


>Medtr0311s0030.2 | cornichon family protein | HC |
          scaffold0311:9876-14866 | 20130731
          Length = 99

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 3  DIFAWL-FSFFVLIGLIVLNVYQLMCLADLEFDYINPYDSASRINKVVLPEYITVGVLLC 61
          ++F WL   F   I L+  N YQ++ L+DLE DYINP++++SRIN  +LPE+I  GVL  
Sbjct: 4  NLFFWLVICFPTNIALLASNFYQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCA 63

Query: 62 FYVVTGHWIMSLFCLPYLYYNVRL 85
            ++TGHW+M L  +P   Y+  L
Sbjct: 64 LCLLTGHWLMFLLNVPVTCYHAML 87